| Title | CMAISE-V1.0_RNA-seq_expressionMatrix |
|---|---|
| Description | Using the same StringTie Quantification Parameters for different batches; there are two batches denoted as LC and singlorn with sample size of 1089+380; Cite the reference if you use the data: PMID: 36544199; PMID: 37792053 |
| Organism | Homo sapiens |
| Data Type | Non-coding RNA Profiling by NGS |
| Data Accessibility | Controlled-access |
| BioProject | PRJCA006118 |
| Release Date | 2024-12-19 |
| Submitter | Zhongheng Zhang (zh_zhang1984@zju.edu.cn) |
| Organization | Zhejiang University |
| Submission Date | 2024-05-19 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX006457-01 | LCgenes_fpkm1089 | 1089 | Non-coding RNA Profiling by NGS | 557.28 MB | txt | Controlled |
| OMIX006457-02 | LC_COUNT1089 | 1089 | Non-coding RNA Profiling by NGS | 175.2 MB | csv | Controlled |
| OMIX006457-03 | singlornFPKM | 380 | Non-coding RNA Profiling by NGS | 857.45 MB | txt | Controlled |
| OMIX006457-04 | stringTieParameter | 1 | Non-coding RNA Profiling by NGS | 10.81 KB | docx | Controlled |
| OMIX006457-05 | singlornCount | 380 | Non-coding RNA Profiling by NGS | 228.31 MB | csv | Controlled |
| OMIX006457-06 | Readmefile | 1 | Non-coding RNA Profiling by NGS | 221 B | txt | Controlled |
| OMIX006457-07 | singlorn_GeneCount | 380 | Non-coding RNA Profiling by NGS | 61.76 MB | csv | Controlled |
| OMIX006457-08 | singlorn_geneFPKM | 380 | Non-coding RNA Profiling by NGS | 119.58 MB | txt | Controlled |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Identifying septic shock subgroups to tailor fluid strategies through multi-omics integration | Nature Communications | 2024-10 | OMIX006457 OMIX006238 | Deposit |
| Deriving consensus sepsis clusters via goal-directed subgroup identification in multi-omics study | Nature Communications | 2025-11 | OMIX006457 OMIX006238 | Deposit |
| Progress of the Chinese Multi-omics Advances in Sepsis (CMAISE) database: a review | Journal of Emergency and Critical Care Medicine | 2025-12 | OMIX006457 OMIX006238 OMIX005608 OMIX005606 OMIX005601 OMIX005600 | Deposit |