OMIX006561

1Summary
Title LC-MS Metabolite Identification in hepG2 with or without treatment of KDM1A inhibitor
Description We treated HepG2 cells with vehicle or 1μM SP2509 for 3 days. Then we did the metabolomics analysis performed by mass spectrometry on control and SP2509-treated HepG2 cells.For sample preparation, cells were mixed with glass beads and a mixed solution of acetonitrile, methanol, and water. The mixture was rapidly frozen in liquid nitrogen and thawed, followed by centrifugation to collect the supernatant. The supernatant was then dried and redissolved in an acetonitrile and 2-amino-3-(2-chloro-phenyl)-propionic acid solution. The sample was filtered and transferred for LC-MS analysis.
Organism Homo sapiens
Data Type Metabolome Data by Mass Spectrometry (MS)
Data Accessibility Controlled-access
BioProject PRJCA026639
Release Date 2024-06-05
Submitter jing tian (jingtiantian1991@126.com)
Organization State Key Laboratory of Systems Medicine for Cancer
Submission Date 2024-05-30
2Files & Download

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File ID File Title Number/Samples File Type File Size File Suffix Download
OMIX006561-01 SP_1.raw 1 Metabolome Data by Mass Spectrometry (MS) 231.66 MB raw Controlled
OMIX006561-02 CON_1.raw 1 Metabolome Data by Mass Spectrometry (MS) 214.66 MB raw Controlled
OMIX006561-03 SP_2.raw 1 Metabolome Data by Mass Spectrometry (MS) 237.69 MB raw Controlled
OMIX006561-04 CON_2.raw 1 Metabolome Data by Mass Spectrometry (MS) 220.7 MB raw Controlled
3Relevant Publications
Paper Title Journal Name Publish Time Accession Citing Type
Transposable elements-mediated recruitment of KDM1A epigenetically silences HNF4A expression to promote hepatocellular carcinoma Nature Communications 2024-07 OMIX006561 Deposit

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