OpenLB
Open Library of Bioscience
Advanced Search
Nucleic acids research
01 08, 2020;48 (D1): D24-D33.

Database Resources of the National Genomics Data Center in 2020.

National Genomics Data Center Members and Partners
Author Information
PMID: 31702008 DOI: 10.1093/nar/gkz913

Abstract

The National Genomics Data Center (NGDC) provides a suite of database resources to support worldwide research activities in both academia and industry. With the rapid advancements in higher-throughput and lower-cost sequencing technologies and accordingly the huge volume of multi-omics data generated at exponential scales and rates, NGDC is continually expanding, updating and enriching its core database resources through big data integration and value-added curation. In the past year, efforts for update have been mainly devoted to BioProject, BioSample, GSA, GWH, GVM, NONCODE, LncBook, EWAS Atlas and IC4R. Newly released resources include three human genome databases (PGG.SNV, PGG.Han and CGVD), eLMSG, EWAS Data Hub, GWAS Atlas, iSheep and PADS Arsenal. In addition, four web services, namely, eGPS Cloud, BIG Search, BIG Submission and BIG SSO, have been significantly improved and enhanced. All of these resources along with their services are publicly accessible at https://bigd.big.ac.cn.

References

  1. Genome Biol. 2019 Oct 22;20(1):215 [PMID: 31640808]
  2. Genomics Proteomics Bioinformatics. 2019 Jun;17(3):229-247 [PMID: 31494266]
  3. Nucleic Acids Res. 2019 Jan 8;47(D1):D78-D83 [PMID: 30357418]
  4. Nucleic Acids Res. 2017 Jan 4;45(D1):D18-D24 [PMID: 27899658]
  5. Curr Protoc Bioinformatics. 2019 Sep;67(1):e82 [PMID: 31524988]
  6. Nucleic Acids Res. 2018 Jan 4;46(D1):D1254-D1260 [PMID: 29161421]
  7. J Genet Genomics. 2017 May 20;44(5):235-241 [PMID: 28529082]
  8. Nucleic Acids Res. 2018 Jan 4;46(D1):D288-D295 [PMID: 29161430]
  9. Nucleic Acids Res. 2018 Jan 4;46(D1):D14-D20 [PMID: 29036542]
  10. Nucleic Acids Res. 2019 Jan 8;47(D1):D983-D988 [PMID: 30364969]
  11. Nucleic Acids Res. 2018 Jan 4;46(D1):D944-D949 [PMID: 29069473]
  12. Nucleic Acids Res. 2020 Jan 8;48(D1):D890-D895 [PMID: 31584095]
  13. Bioinformatics. 2019 Sep 1;35(17):2949-2956 [PMID: 30649200]
  14. Nucleic Acids Res. 2015 Jan;43(Database issue):D54-8 [PMID: 25294826]
  15. Nucleic Acids Res. 2019 Jan 8;47(D1):D128-D134 [PMID: 30329098]
  16. Nucleic Acids Res. 2001 Jan 1;29(1):308-11 [PMID: 11125122]
  17. Nucleic Acids Res. 2019 Jan 8;47(D1):D175-D180 [PMID: 30371818]
  18. Nucleic Acids Res. 2020 Jan 8;48(D1):D927-D932 [PMID: 31566222]
  19. Nucleic Acids Res. 2015 Jan;43(Database issue):D187-92 [PMID: 25399417]
  20. Nucleic Acids Res. 2020 Jan 8;48(D1):D971-D976 [PMID: 31584086]
  21. Natl Sci Rev. 2019 Oct;6(5):867-869 [PMID: 34691944]
  22. Nucleic Acids Res. 2019 Jan 8;47(D1):D170-D174 [PMID: 30364952]
  23. Nucleic Acids Res. 2014 Jan;42(Database issue):D1200-5 [PMID: 24185698]
  24. Plant Physiol Biochem. 2019 Apr;137:53-61 [PMID: 30738217]
  25. Nucleic Acids Res. 2016 Jan 4;44(D1):D1172-80 [PMID: 26519466]
  26. Nucleic Acids Res. 2018 Jan 4;46(D1):D308-D314 [PMID: 29140524]
  27. Nucleic Acids Res. 2011 Jan;39(Database issue):D1103-7 [PMID: 21097471]
  28. Nucleic Acids Res. 2019 Jan 8;47(D1):D8-D14 [PMID: 30365034]
  29. Genomics Proteomics Bioinformatics. 2017 Feb;15(1):14-18 [PMID: 28387199]
  30. Database (Oxford). 2016 Apr 17;2016: [PMID: 27087310]
  31. Genome Biol. 2016 Apr 12;17:66 [PMID: 27072794]
  32. Nucleic Acids Res. 2020 Jan 8;48(D1):D1174-D1180 [PMID: 31665422]
  33. Nucleic Acids Res. 2020 Jan 8;48(D1):D1069-D1075 [PMID: 31599330]
  34. Nucleic Acids Res. 2019 Jul 2;47(W1):W636-W641 [PMID: 30976793]

MeSH Term

Computational Biology
Data Warehousing
Databases, Genetic
Genome, Human
Genome-Wide Association Study
Genomics
Humans
Web Browser
Journal Article Research Support, Non-U.S. Gov't

Links to CNCB-NGDC Resources

Database Commons: DBC001802 (NGDC)

Word Cloud

Similar Articles

Cited By