| Database and Motifs | High-scoring Motif Occurences | Debugging Information | Results in TSV Format | Results in GFF3 Format |
FIMO version 5.4.1, (Release date: Sat Aug 21 19:23:23 2021 -0700)
For further information on how to interpret these results please access https://meme-suite.org/meme/doc/fimo-output-format.html.
To get a copy of the FIMO software please access https://meme-suite.org
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /zongwenting/tool/upload/motif/2023061450059_input.fa
Database contains 1 sequences, 2000 residues
MOTIFS /zongwenting/software/motif_databases/JASPAR/JASPAR2022_CORE_plants_non-redundant.meme (DNA)
| MOTIF | WIDTH | BEST POSSIBLE MATCH |
|---|---|---|
| MA0020.1 | 6 | AAAGCA |
| MA0021.1 | 6 | AAAGCG |
| MA0034.1 | 10 | GACAACCGCC |
| MA0053.1 | 5 | AAAGC |
| MA0054.1 | 9 | TAACCGTTT |
| MA0064.1 | 5 | AAAGC |
| MA0082.1 | 14 | CCAAAAATGGAAAT |
| MA0096.1 | 7 | ATGACGT |
| MA0097.1 | 12 | GATGACGTGGCC |
| MA0121.1 | 8 | AGATCCGC |
| MA0123.1 | 10 | CGGTGCCCCC |
| MA0127.1 | 10 | ACTTCTTATT |
| MA0128.1 | 8 | ACACGTGG |
| MA0129.1 | 7 | TACGTCA |
| MA0549.1 | 11 | CGCACGTGTGA |
| MA0551.1 | 16 | AATGCCACGTGGCATT |
| MA0552.1 | 14 | AGAAGGTCACGTGG |
| MA0553.1 | 8 | CCTCGTAC |
| MA0554.1 | 15 | TTTTTCCATTTTTGG |
| MA0555.1 | 20 | ATTACCAAAAATGGAAAGAA |
| MA0556.1 | 15 | TTCCAAAAATGGAAA |
| MA0557.1 | 12 | CTCACGCGCTCA |
| MA0558.1 | 21 | AATTTCCAAAAATAGAAAGAA |
| MA0559.1 | 14 | CCAAAAAAGGAAAA |
| MA0560.1 | 10 | AGCCACGTGA |
| MA0561.1 | 8 | CACGTGGC |
| MA0562.1 | 8 | TCACGTGG |
| MA0563.1 | 11 | TCCATTTTTGG |
| MA0564.1 | 9 | CTGCATGCA |
| MA0566.1 | 8 | GCACGTGC |
| MA0567.1 | 8 | CGCCGCCA |
| MA0568.1 | 8 | GCACGTGC |
| MA0569.1 | 8 | ACACGTGC |
| MA0005.2 | 18 | ATTACCAAATTGGGTAAT |
| MA0571.1 | 21 | TGGCACAGTTCCCGAGGTGAA |
| MA0573.1 | 19 | AATCGTAATGATTACTCGC |
| MA0574.1 | 13 | CGACGGTAGGTGG |
| MA0575.1 | 13 | AAGTGACAGTTAC |
| MA0576.1 | 13 | GGGGGGTAGGTGG |
| MA0578.1 | 16 | TTTTTTGTACCTTATT |
| MA0579.1 | 11 | GGCTCAGCGCG |
| MA0580.1 | 14 | CGTGAGTCACGTGA |
| MA0581.1 | 11 | TGCATGCACAT |
| MA0582.1 | 12 | CAGCAACAGAAA |
| MA0583.1 | 12 | ATCACCTGAGGC |
| MA0584.1 | 18 | TTTACCATATATAGAAAT |
| MA0001.2 | 18 | GTTTCCATATATAGTAAG |
| MA0585.1 | 18 | ATTGCCAAATTGGGTAAG |
| MA0587.1 | 10 | GTGGACCCGG |
| MA0588.1 | 11 | TGGTGACGTAA |
| MA0589.1 | 11 | TTGACCGAGCC |
| MA0590.1 | 19 | TATTGACCGGCGGTCAATA |
| MA0931.1 | 10 | TGACACGTGG |
| MA0932.1 | 8 | AATTAATT |
| MA0933.1 | 8 | AATTAAAT |
| MA0934.1 | 8 | AATTAATT |
| MA0935.1 | 8 | TACGTAAC |
| MA0936.1 | 8 | ACACGCAA |
| MA0937.1 | 8 | ACACGTAA |
| MA0939.1 | 8 | ACACGCAA |
| MA0940.1 | 13 | CCAAAAAAGGAAA |
| MA0941.1 | 13 | CATGACACGTGTT |
| MA0942.1 | 8 | ACCGACAT |
| MA0943.1 | 8 | GCCGACAA |
| MA0944.1 | 9 | TTTGTCGGC |
| MA0945.1 | 10 | AGCGAATCTT |
| MA0946.1 | 8 | AAGATACG |
| MA0947.1 | 8 | AGATACGC |
| MA0948.1 | 13 | ATCAAGATACGAT |
| MA0949.1 | 10 | GCGAATCTTT |
| MA0950.1 | 8 | AATGATTG |
| MA0951.1 | 8 | TAATAATT |
| MA0952.1 | 8 | AATTATTG |
| MA0953.1 | 9 | GCAATAATT |
| MA0955.1 | 7 | GGTACGG |
| MA0956.1 | 10 | AGCACGTGCT |
| MA0957.1 | 8 | GCACGTGC |
| MA0958.1 | 8 | GCACGTGC |
| MA0959.1 | 8 | GCACGTGC |
| MA0960.1 | 10 | GGCACGTGCC |
| MA0961.1 | 9 | GCCACTTGC |
| MA0962.1 | 8 | GCACGTGG |
| MA0963.1 | 8 | GCACGTGC |
| MA0966.1 | 10 | AGCACGTGCT |
| MA0967.1 | 8 | TGACGTCA |
| MA0969.1 | 9 | AAACCGCGT |
| MA0970.1 | 9 | CCGCGTTAC |
| MA0971.1 | 10 | ATGTCGGCAA |
| MA0972.1 | 8 | AAATATCT |
| MA0973.1 | 10 | AAAAAAGTGA |
| MA0975.1 | 8 | CCGCCGCC |
| MA0977.1 | 8 | AAAAAGTG |
| MA0978.1 | 8 | ATGTCGGC |
| MA0979.1 | 8 | CGCCGCCC |
| MA0981.1 | 10 | CAAAAAGTTA |
| MA0982.1 | 7 | AAAAAGT |
| MA0983.1 | 8 | GAAAAAGT |
| MA0984.1 | 8 | AAAAGAGG |
| MA0986.1 | 8 | CACCGACA |
| MA0987.1 | 10 | CAAAAAGTAA |
| MA0988.1 | 10 | CGCACGTGCG |
| MA0989.1 | 9 | CAAAAAGTG |
| MA0990.1 | 10 | CAATTAATGC |
| MA0993.1 | 10 | CGCCGCCATT |
| MA0997.1 | 9 | GCGCCGCCA |
| MA0998.1 | 10 | CCGCCGCCAT |
| MA1004.1 | 8 | CGCCGCCA |
| MA1006.1 | 10 | CTGCCGGCGT |
| MA1007.1 | 8 | TGTCGGTG |
| MA1008.1 | 10 | TTGTCGGTGA |
| MA1009.1 | 8 | TGTCGGAA |
| MA1010.1 | 13 | TTGTCGGTATAAA |
| MA1011.1 | 10 | GTCACGTGAC |
| MA1012.1 | 14 | CTTTCTATTTTTGG |
| MA1013.1 | 8 | TAGATCTG |
| MA1014.1 | 8 | TAGATCTG |
| MA1015.1 | 8 | TAGATCTA |
| MA1016.1 | 9 | TATGATCAG |
| MA1017.1 | 9 | CAGATCTAG |
| MA1018.1 | 11 | TCTAGATCTGT |
| MA1019.1 | 9 | GGGGCCCAC |
| MA1020.1 | 8 | GTTAACCA |
| MA1021.1 | 8 | CCACGTGC |
| MA1022.1 | 10 | CAAAAAGTGA |
| MA1023.1 | 8 | TGTCGGTG |
| MA1024.1 | 10 | CCAATCATTA |
| MA1025.1 | 12 | CGGGCACGTGCT |
| MA1027.1 | 8 | AGATATTC |
| MA1028.1 | 8 | GAATATTC |
| MA1030.1 | 10 | AACCCTAGAT |
| MA1031.1 | 10 | GTGGGCCCAC |
| MA1032.1 | 10 | ATGCCGACAT |
| MA1033.1 | 8 | ACACGTGT |
| MA1034.1 | 8 | CGCCGCCA |
| MA1035.1 | 8 | GGGACCAC |
| MA1036.1 | 8 | GGTAGGTA |
| MA1037.1 | 9 | AAGTTAGGT |
| MA1038.1 | 11 | AGGTAGGTAGA |
| MA1039.1 | 8 | GGTAGGTG |
| MA1040.1 | 8 | GTTAGGTA |
| MA1041.1 | 8 | ACCTACCG |
| MA1042.1 | 8 | GTTAGGTA |
| MA1043.1 | 10 | ATACGCAACC |
| MA1044.1 | 12 | TAACACGCCACA |
| MA1045.1 | 10 | ATTACGTAAA |
| MA1046.1 | 9 | TTAAGTAAT |
| MA1048.1 | 8 | ACCGACCA |
| MA1049.1 | 8 | CGCCGCCG |
| MA1050.1 | 8 | GGGCCCAC |
| MA1051.1 | 8 | GCGCCGCC |
| MA1053.1 | 8 | GCGCCGCC |
| MA1054.1 | 10 | TGGGGACCAC |
| MA1056.1 | 12 | TATCGTACGGAT |
| MA1057.1 | 8 | TGTACGGT |
| MA1058.1 | 9 | CGTACGGTT |
| MA1060.1 | 8 | CGTACGGC |
| MA1061.1 | 9 | CCCACGTGC |
| MA1063.1 | 10 | TGGGGCCCAC |
| MA1064.1 | 10 | GTGGGCCCAC |
| MA1066.1 | 8 | GGGCCCAC |
| MA1067.1 | 8 | GGGACCAC |
| MA1071.1 | 7 | GAAAAAG |
| MA1074.1 | 8 | CCACGTGC |
| MA1075.1 | 8 | CGTTGACC |
| MA1077.1 | 10 | ATGGTCAACG |
| MA1078.1 | 8 | CGGTCAAC |
| MA1080.1 | 8 | AGTCAACG |
| MA1084.1 | 8 | CGTTGACC |
| MA1086.1 | 10 | AAGTCAACAC |
| MA1088.1 | 10 | GAGGTCAACG |
| MA1089.1 | 10 | AAAGTCAACG |
| MA1090.1 | 11 | CCGGTCAACGT |
| MA1091.1 | 8 | TGGTCAAC |
| MA1092.1 | 8 | CGGTCAAC |
| MA1093.1 | 8 | AAGTCAAC |
| MA1095.1 | 8 | GGGCCCAC |
| MA1096.1 | 8 | GGGACCAC |
| MA1097.1 | 8 | GGGCCCAC |
| MA1098.1 | 8 | GGGCCCAC |
| MA1156.1 | 20 | TTTTTTTTTGTCGTTTTCTG |
| MA1157.1 | 20 | TTTTTTTTTGTCGTTTTGTG |
| MA1158.1 | 20 | CAGAAAACGACAAAAAAAAA |
| MA1159.1 | 15 | AAAAAAAGACAAAAA |
| MA1160.1 | 20 | TTTTTTTTTGTCGTTTTGTG |
| MA1161.1 | 15 | ATTTTAAAATTTAAA |
| MA1162.1 | 15 | ATTTAAAATTCAAAT |
| MA1164.1 | 11 | AAAAAGATTCC |
| MA1166.1 | 14 | AAAGGGAATATTCC |
| MA1167.1 | 11 | AGAATATTCCA |
| MA1168.1 | 14 | AAAAGAATCTTCTT |
| MA1169.1 | 13 | TTAATTACCGTTA |
| MA1170.1 | 17 | AAAATAACCGTTACAAA |
| MA1171.1 | 11 | CTTTACCGTTA |
| MA1172.1 | 15 | AAAATATGACCGTTG |
| MA1173.1 | 15 | AACCGTAACCGAATT |
| MA1174.1 | 15 | ATAAATAACGGTATT |
| MA1175.1 | 11 | GTAACCGAATT |
| MA1176.1 | 11 | TAACCGTTACA |
| MA1177.1 | 13 | ACCGTAACCGTAA |
| MA1179.1 | 19 | ATTACCGTTAAAGTTGTTA |
| MA1180.1 | 15 | AAATATAACCGTTGG |
| MA1181.1 | 11 | AAGTCAGTTAT |
| MA1182.1 | 12 | AGATATTTTTTT |
| MA1183.1 | 11 | AGATATTTTTT |
| MA1184.1 | 14 | AAAAAAATATCTTA |
| MA1185.1 | 10 | AGATATTTTT |
| MA1186.1 | 15 | ATTAACCTTATCCTC |
| MA1187.1 | 10 | AGATATTTTT |
| MA1188.1 | 14 | ATCCTTATCTTCAT |
| MA1189.1 | 15 | AATTTGGATAAGATT |
| MA1190.1 | 11 | AGATATTTTTT |
| MA1191.1 | 15 | TAAAAAAATATCTTA |
| MA1192.1 | 15 | TATGGATAAGGTTAT |
| MA1193.1 | 21 | AAAAAATTGGATAAGGATAAG |
| MA1194.1 | 15 | AATTAGGATAAGGTT |
| MA1195.1 | 15 | AACCTTATCCATAAA |
| MA1196.1 | 15 | AACCTTATCTTCATC |
| MA1197.1 | 12 | AAAGCGCGTGAA |
| MA1198.1 | 11 | ATTAATCATTA |
| MA1199.1 | 15 | TTTCCTTTTTTGGAA |
| MA1201.1 | 7 | CATCATC |
| MA1202.1 | 6 | TCACCA |
| MA1203.1 | 15 | TTCCAAAAATGGAAA |
| MA1204.1 | 18 | TTACCAAAAATGGAAAAT |
| MA1205.1 | 19 | TTTCCAAAAAAGGAAAAAA |
| MA1206.1 | 10 | ATCCGACAAA |
| MA1207.1 | 17 | AACACGTGTTAAATTTG |
| MA1208.1 | 14 | TTTTTTACCGTTTT |
| MA1209.1 | 11 | TCAATAATTGA |
| MA1211.1 | 11 | TCAATCATTGG |
| MA1212.1 | 11 | TCAATAATTAA |
| MA1214.1 | 21 | AAACCAATAATTGAAAATTAT |
| MA1215.1 | 11 | CCAATAATTGA |
| MA1218.1 | 13 | TGATGTCGGCGAA |
| MA1220.1 | 15 | CTCCACCGACAAAAT |
| MA1221.1 | 15 | TGGCGGCGGCGGAGG |
| MA1222.1 | 15 | CCACCTCCACCGCCA |
| MA1223.1 | 14 | AATATTGTCGGTGG |
| MA1225.1 | 15 | CCACCGCCGCCGCCA |
| MA1226.1 | 15 | GGTGGAGGCGGTGGA |
| MA1228.1 | 17 | GCGGCGGCGGCGGCGGC |
| MA1229.1 | 15 | AATTGTCGGTGGAGT |
| MA1230.1 | 14 | CCACCGACAAATTC |
| MA1232.1 | 20 | GGCGGTGGAGGCGGTGGTGG |
| MA1234.1 | 14 | ATGGACGGTGGAGG |
| MA1235.1 | 11 | CGATTCCCGAG |
| MA1236.1 | 19 | CGGAGGTGGCGGCGGAGGA |
| MA1239.1 | 19 | CGCCGCCGCCGCCGCCGCC |
| MA1240.1 | 21 | TCCACCGCCTCCGCCGCCGCC |
| MA1241.1 | 16 | CTCCACCGACAATTTC |
| MA1242.1 | 11 | CCGCCACCGCC |
| MA1243.1 | 17 | CACCTCCACCGACATTA |
| MA1244.1 | 19 | GGCGGAAATGGCGGCGGCG |
| MA1246.1 | 21 | TCCGCCGCCGCCACCGCCGCC |
| MA1247.1 | 15 | TGGCGGCGGCGGTGG |
| MA1248.1 | 20 | CCACCACCACCTCCACCGAC |
| MA1250.1 | 15 | CCACCTCCACCGCCA |
| MA1251.1 | 19 | CTTCATCACCACCGACAAT |
| MA1252.1 | 15 | CCGCCGCCGCCGCCA |
| MA1253.1 | 14 | TATTGTCGGTGGAG |
| MA1256.1 | 21 | CGGCGGAAATGGCGGCGGAGG |
| MA1257.1 | 21 | CGGCGGCGGTGGCGGCGGCGG |
| MA1258.1 | 21 | TGGTTATGTCGGTGGAGGTGG |
| MA1259.1 | 15 | GATATTGTCGGTGGT |
| MA1260.1 | 21 | GGTGGTGGTGGTGTCGGTGGA |
| MA1261.1 | 15 | CTGTTGCGGCGGCGG |
| MA1262.1 | 21 | CCGCCGCCTCCGCCGCCGCCA |
| MA1263.1 | 14 | ATGGTCGGTGGAGG |
| MA1264.1 | 15 | CGGCGGCGGCGGCGG |
| MA1266.1 | 15 | CCGCCGCCGCCGGCG |
| MA1267.1 | 29 | TTTTTTTTTTTTTTTACTTTTTTTTTTTT |
| MA1268.1 | 27 | TTTTCACTTTTTCTTTTTTTTTTTTTT |
| MA1269.1 | 14 | GAAAAAGTAACTTT |
| MA1270.1 | 19 | TTTACTTTTTGCTTTTTTT |
| MA1273.1 | 19 | AAAAAAAAAAGGCAAAAAA |
| MA1274.1 | 21 | TTTACTTTTTTTTTTTTTTTT |
| MA1275.1 | 11 | AGAAAAAGTAA |
| MA1276.1 | 11 | CAAAAAGTTAA |
| MA1277.1 | 21 | AAAAAGAAAAAGTAAAAAAAA |
| MA1278.1 | 21 | TTTTTTTTTTTTTTACTTTTT |
| MA1279.1 | 21 | AAAAAAAAGAAAAAGTGAAAA |
| MA1280.1 | 14 | CAAAAAGTTAAAAA |
| MA1281.1 | 21 | AAAAAAGTAAAAAAAAAAAAA |
| MA1282.1 | 13 | GTGGGGACCACAA |
| MA1283.1 | 20 | ACAGAGGATGTGGGACCCAC |
| MA1284.1 | 30 | TGTGGGCCCCACCTCCTCTCTTGGGCCTAT |
| MA1285.1 | 21 | CCATTTGCCGTGGGTCCCACC |
| MA1286.1 | 12 | GTTGGGACCACA |
| MA1287.1 | 14 | TGTGGGCCCCACTT |
| MA1288.1 | 13 | ATGTGGGCCCCAC |
| MA1289.1 | 13 | GTTGGGACCACAT |
| MA1290.1 | 11 | GTGGTCCCCAC |
| MA1291.1 | 11 | GTGGGACCCAC |
| MA1292.1 | 15 | AAAAAATTAGGTAAA |
| MA1293.1 | 14 | TTTACCTAACTTTT |
| MA1294.1 | 15 | AAAAAAGTTAGGTAG |
| MA1295.1 | 13 | AACGTTGACTATT |
| MA1296.1 | 11 | CGTTGACTTTG |
| MA1297.1 | 13 | AAAAGTCAACGGT |
| MA1298.1 | 11 | AAAAGTCAACG |
| MA1299.1 | 14 | AAAAAGTCAACGCC |
| MA1300.1 | 19 | CGTTGACTTTTTTTAACAT |
| MA1301.1 | 11 | AAAAGTCAACG |
| MA1302.1 | 11 | AAAAGTCAACG |
| MA1303.1 | 13 | AAAAGTCAACGAT |
| MA1304.1 | 12 | AAAAAGTCAAAG |
| MA1305.1 | 12 | AGCGTTGACTTT |
| MA1306.1 | 14 | AGCGTTGACTTTTT |
| MA1308.1 | 13 | AGCGTTGACTTTT |
| MA1309.1 | 11 | AAAAGTCAACG |
| MA1310.1 | 21 | TTTTAATTAGCGTTGACTTTT |
| MA1312.1 | 14 | ACCGGCGTTGACTT |
| MA1313.1 | 14 | AGCGTTGACTTTTT |
| MA1314.1 | 13 | AAAAGTCAACGAT |
| MA1315.1 | 14 | TCGTTGACTTTTTT |
| MA1316.1 | 11 | AAAAGTCAACG |
| MA1317.1 | 13 | CTTTGACTTTTTT |
| MA1318.1 | 13 | ATCGTTGACTTTT |
| MA1320.1 | 14 | AAATTGTACGGACA |
| MA1321.1 | 11 | ATTGTACGGAT |
| MA1323.1 | 11 | CAGATCGGATT |
| MA1324.1 | 8 | ATCGGATC |
| MA1325.1 | 15 | TTTAGATCTGATTTT |
| MA1326.1 | 11 | ACGTAATTAAT |
| MA1328.1 | 15 | TTTAATCATTAATTA |
| MA1330.1 | 15 | AAATGTAATTAATTA |
| MA1331.1 | 11 | CGCACGTGTGG |
| MA1332.1 | 11 | TCACACGTGCG |
| MA1333.1 | 11 | CGCACGTGTGA |
| MA1334.1 | 15 | TGCCACGTCAGCATC |
| MA1335.1 | 11 | TGACGTCATCA |
| MA1336.1 | 14 | GATGACGTCATCAT |
| MA1337.1 | 15 | GATGCTGACGTGGCA |
| MA1339.1 | 12 | GCCACGTCAGCA |
| MA1340.1 | 15 | GATGCTGACGTGGCA |
| MA1341.1 | 15 | GATGCTGACGTGGCA |
| MA1343.1 | 14 | TTGACAGCTGGTCA |
| MA1344.1 | 15 | AATGATGACGTGGCA |
| MA1345.1 | 14 | GCCACGTCAGCATC |
| MA1346.1 | 15 | GATGATGACGTCACT |
| MA0968.2 | 15 | TGCCACGTCAGCATC |
| MA1348.1 | 11 | GATGACGTCAT |
| MA1349.1 | 15 | AATGGTCACGTGGCA |
| MA1350.1 | 12 | TGCTGACGTGGC |
| MA1352.1 | 21 | ACCCTAAACCCTAAACCCTAA |
| MA1353.1 | 15 | GGATTTAGGGTTTAG |
| MA1354.1 | 29 | CTAAACCCTAAACCCTAAACCCTAAACCC |
| MA1355.1 | 15 | AATTAAACCCTAATT |
| MA1356.1 | 21 | AACCCTAAACCCTAAACCCTA |
| MA1357.1 | 11 | TGCAAGTTGCA |
| MA1358.1 | 11 | AGCAACTTGCA |
| MA1361.1 | 17 | CACGTGTTTCACGTGGT |
| MA1362.1 | 15 | GAGAGGTCACGTGCG |
| MA1363.1 | 15 | CGTGTTTGGCACGTG |
| MA1364.1 | 15 | GTGAATGCCACGTGG |
| MA1366.1 | 16 | ACGGTAAAAAATTAAA |
| MA1367.1 | 14 | AAACAAAACCGGAA |
| MA1369.1 | 11 | GTAATTAATGC |
| MA1370.1 | 16 | TTTTTGTCGTTTTGTG |
| MA1371.1 | 17 | CACAAAACGACAAAAAA |
| MA1372.1 | 11 | CACTTTCACTA |
| MA1373.1 | 15 | CACAAAACGACAAAA |
| MA1374.1 | 18 | CACAAAACGACAAAAAAA |
| MA1375.1 | 11 | GCATTAATTAC |
| MA1376.1 | 17 | AATTGTCGGTGGTGGCA |
| MA1377.1 | 19 | GGCACGGATCCCGAGGAAA |
| MA1378.1 | 15 | CCTCGGGATTCGTGC |
| MA1379.1 | 15 | TTTTAAAATTTAAAT |
| MA1380.1 | 15 | TTTTAAATTTTTTAA |
| MA1381.1 | 15 | TCATTTTCACTCTCC |
| MA1382.1 | 15 | ACCTCACGCGCCTCC |
| MA1383.1 | 15 | ATTAGAATATTCTTT |
| MA1384.1 | 13 | AAAAGAATATTCC |
| MA1385.1 | 15 | TTAAAATATTCTTTT |
| MA1387.1 | 15 | AGAATCGAAGATTCT |
| MA1388.1 | 8 | AGAATCTG |
| MA1389.1 | 15 | AAAGAATATTCCAAT |
| MA1396.1 | 13 | TAGATCTAGATCT |
| MA1397.1 | 11 | AATGGATAAGG |
| MA1400.1 | 14 | AAATGGATAAGGTT |
| MA1401.1 | 12 | AAAAATATCTTA |
| MA1402.1 | 21 | CTCTCTCTCTCTCTCTCTCTC |
| MA1403.1 | 30 | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG |
| MA1404.1 | 24 | GAGAGAGAGAGAGAGAGAGAGAGA |
| MA0954.2 | 13 | TCAATGATTGATT |
| MA1000.2 | 15 | GTGGCGGCGGCGGAG |
| MA0586.2 | 11 | TCCGTACAATT |
| MA1026.2 | 15 | AAAAGTAATGATTAC |
| MA0548.2 | 19 | CTTTCCTTTTTTGGAAAGT |
| MA0550.2 | 20 | CCACACGTGCGACTTTTTTT |
| MA1059.2 | 12 | AATTGTACGGAC |
| MA1405.1 | 10 | GACTGACAGT |
| MA1406.1 | 10 | TAATCATTGG |
| MA1408.1 | 10 | AGTTAGGTAA |
| MA1409.1 | 10 | AAGATACGGT |
| MA1410.1 | 10 | GGGGCCCCCC |
| MA1411.1 | 10 | AGCACGTGCG |
| MA1412.1 | 10 | TGCACGTGCG |
| MA1414.1 | 10 | TGGCGCCAAA |
| MA1415.1 | 11 | AAAACAGAGCA |
| MA1085.2 | 10 | AAAGTCAAAA |
| MA1416.1 | 14 | GAGAGAGAGAGAGA |
| MA1417.1 | 13 | GTGCCACGTCATC |
| MA1424.1 | 15 | CGCCACCGACACAGC |
| MA1425.1 | 12 | GATGACGTGGCA |
| MA1426.1 | 10 | ATACGCGCCT |
| MA1428.1 | 9 | GGGGCCCAC |
| MA1430.1 | 10 | GGGCCCCCCC |
| MA0570.2 | 12 | ACACGTGGCATA |
| MA1706.1 | 10 | GTACATTCTA |
| MA1659.1 | 12 | TGCCACGTCACC |
| MA1660.1 | 24 | ATTTTACTTGTTCTCCAAGTAAAC |
| MA1661.1 | 12 | ATGGTTAAAAAT |
| MA1662.1 | 13 | AGTTAACAGAAAT |
| MA1669.1 | 14 | TTTGCCGACATCAT |
| MA1670.1 | 15 | TTTTGCCGACATAAA |
| MA1671.1 | 11 | CGCCGCCGCCG |
| MA1672.1 | 13 | GTGACGTGGCAAA |
| MA1673.1 | 12 | TCGCCGGAAAAT |
| MA1675.1 | 13 | TACACGCAACTTA |
| MA1677.1 | 12 | AACAAGAAACAT |
| MA1679.1 | 15 | CGCCACCGACATTTC |
| MA1681.1 | 14 | AAAAGATAAGGTTA |
| MA1682.1 | 14 | TAAAATTCAAATTT |
| MA1732.1 | 11 | TACAAGCAATT |
| MA1733.1 | 24 | TAGGTTGCTTGTGTCACAAGTAAC |
| MA1734.1 | 24 | AGGTTGCGTGTAACACAAGTTACC |
| MA1735.1 | 11 | TACAAGTAATC |
| MA1736.1 | 24 | AAAGAAGCTTGTAGTACAAGCTAC |
| MA1737.1 | 12 | TACAAGCAACCT |
| MA1738.1 | 11 | TACAAGTAATC |
| MA1739.1 | 11 | AACAAGTTATC |
| MA1740.1 | 13 | ATCTCCGGCGACG |
| MA1741.1 | 13 | ATCTCCGGCGATG |
| MA1742.1 | 16 | ATACCCACCAACCAAA |
| MA1743.1 | 15 | TTTTTGGCGGGAAAA |
| MA1744.1 | 13 | TTCACCAAACATA |
| MA1745.1 | 17 | ATCTCCACCAACCCCAA |
| MA1746.1 | 10 | TTCACCTAAC |
| MA1747.1 | 11 | TACAAGAAACC |
| MA1748.1 | 11 | TACAAGCAACC |
| MA1749.1 | 24 | GTAACTTGTGACACAAGTTACCTT |
| MA1750.1 | 24 | TAGGTTGCGTGTAACACAAGTTAC |
| MA1751.1 | 14 | TTAACACGGCACCT |
| MA1752.1 | 11 | TACAAGCAATC |
| MA1753.1 | 13 | AAGAAGCAACCTA |
| MA1754.1 | 12 | AACAAGAAACCT |
| MA1755.1 | 13 | ATGCAAGCAATCT |
| MA1756.1 | 12 | AAACAAGTATAT |
| MA1757.1 | 11 | TACAAGCAATC |
| MA1758.1 | 12 | TTAATGATTGAT |
| MA1759.1 | 13 | TACAAGCAACCTA |
| MA1245.2 | 11 | GCCGCCGCCGC |
| MA1365.2 | 11 | ATGGTAAAAAA |
| MA1327.2 | 10 | TTAATTAATT |
| MA0110.3 | 12 | ATCAATCATTAA |
| MA1393.2 | 11 | ATAACCGTTAT |
| MA0974.2 | 12 | ATAAAAAGTGAA |
| MA0976.2 | 12 | CCGCCGCCACCG |
| MA1265.2 | 12 | ACCACCGACAAA |
| MA1233.2 | 15 | CCGCCGCCGACAAAA |
| MA1227.2 | 15 | TTTTGCCGACAAAAT |
| MA1238.2 | 13 | ACCACCGACAAAA |
| MA0995.2 | 11 | CCGCCGACACA |
| MA1005.2 | 11 | GCCGCCGCCGC |
| MA0992.2 | 12 | GCCGCCGTCATA |
| MA0565.2 | 10 | AAACATGCAT |
| MA1368.2 | 14 | ATTAACTATGGTTA |
| MA1398.2 | 11 | ATCTTATCCAT |
| MA1391.2 | 13 | TAATAACCGTAAA |
| MA1394.2 | 12 | TTAACGGTCAAA |
| MA0980.2 | 12 | TTGCCGACAAAA |
| MA1062.2 | 19 | AAAAGTGGGACCCACTTTT |
| MA1065.2 | 19 | AAAAGTGGGACCCACATTT |
| MA1047.2 | 15 | ATGATGACGTCATCA |
| MA1076.2 | 16 | AAAAAAGTCAACGGTT |
| MA1311.2 | 11 | AAGGTCAACGA |
| MA1329.2 | 13 | TAACTAATTAATT |
| MA1685.1 | 15 | CTAATGGGAGACACG |
| MA1686.1 | 14 | AGCGGGGGACACGT |
| MA1687.1 | 16 | CGGGGGACATGTCGGG |
| MA1688.1 | 14 | AACAAGACAAGAAA |
| MA1689.1 | 13 | ACCCGACAAAAAT |
| MA1690.1 | 15 | CAACGGGGGACAAGG |
| MA1691.1 | 13 | CCAGCAGACATGA |
| MA1692.1 | 15 | CATAGCCGACAAAAA |
| MA1693.1 | 13 | AACAGACAGCAAG |
| MA1694.1 | 14 | GCACCCGACAAGAT |
| MA1695.1 | 14 | GCGGGGGACACGTC |
| MA1696.1 | 12 | CGGGGAACACGT |
| MA1697.1 | 12 | ACACGACAAGAA |
| MA1698.1 | 14 | ACTGCCGACAAGGT |
| MA1761.1 | 10 | ATAGATCTAT |
| MA1762.1 | 15 | ATCAGGCCCAATAAT |
| MA1764.1 | 11 | AGTTAGCTGAT |
| MA1765.1 | 10 | TACACGGAAC |
| MA1766.1 | 10 | CACCGACCAT |
| MA1767.1 | 10 | CCGCCGCCGT |
| MA1768.1 | 11 | ATAGATTCGAA |
| MA1769.1 | 12 | TGCTGACGTGGC |
| MA1770.1 | 10 | TGACAGCTGT |
| MA1771.1 | 10 | CTTATCCATA |
| MA1772.1 | 8 | GCAACATA |
| MA1773.1 | 8 | GCAACATA |
| MA1774.1 | 11 | CAACTTCACTA |
| MA1775.1 | 10 | TTGTACGGAC |
| MA1776.1 | 9 | AGTCAACGC |
| MA1777.1 | 10 | AGCACGTGCC |
| MA1778.1 | 9 | TGCCGACAT |
| MA1811.1 | 14 | AAAAAGTAGCTTTT |
| MA1812.1 | 15 | ATTTTGGCGCCAAAA |
| MA1813.1 | 15 | TTTTTGGCGGGAAAA |
| MA1814.1 | 11 | CAGGTACATTC |
| MA1815.1 | 15 | CCTTTGCCGACAAAA |
| MA1816.1 | 15 | CCACCGCCGCCGCCA |
| MA1817.1 | 21 | CCACCGCCGCCGCCATTTCCG |
| MA1818.1 | 11 | AACATTCTTTT |
| MA1819.1 | 15 | TTGTCAGAAAATACA |
| MA1820.1 | 11 | TGACAGCTGGT |
| MA1821.1 | 11 | TGCCAGCTGTA |
| MA1822.1 | 14 | TTGACAGCTGTACA |
| MA1823.1 | 15 | AATGCTGACGTGGCA |
| MA1824.1 | 11 | GCATTAATTAC |
| MA1825.1 | 15 | CAACTACCAACTACC |
| MA1826.1 | 14 | TTCCACCTACCATT |
| MA1827.1 | 13 | TCTGCCTAACTTT |
| MA1828.1 | 14 | TTATACCTAACTTT |
| MA1829.1 | 15 | CTCACCTACCAACTT |
| MA1830.1 | 11 | CCAACAAACTT |
| MA1831.1 | 15 | TTCCCAACCACCAAC |
| MA1832.1 | 14 | TTTCACCTAATTTT |
| MA1833.1 | 13 | TTTACCTACCTTT |
| MA1834.1 | 15 | TTTGTTCACCTAACT |
| MA1835.1 | 13 | TTTCACCTACCTT |
| MA1836.1 | 21 | TTTCAAAATTTTCACCTACCT |
| MA1837.1 | 19 | CTTTTCCAACCACCTTTTT |
| MA1838.1 | 13 | CTCCACCTACCAT |
| MA1839.1 | 21 | TCCACCTAACATTACCACTAC |
| MA1840.1 | 14 | TTTCACCTACCTTT |
| MA1841.1 | 15 | TTTCACCTAATTTTT |
| MA1842.1 | 11 | CCACCAACCAC |
| MA1843.1 | 10 | TTTACCTAAC |
| MA1844.1 | 19 | ATTTCCCAACTACCTTCTA |
| MA1845.1 | 16 | CTTGCTCCCCAAGTTA |
| MA1846.1 | 16 | CTTGAATTTCACGCAA |
| MA1847.1 | 19 | TTACTTCTTTTACAAGTTT |
| MA1848.1 | 21 | GTTGCTTCTGCTACAAGTAAC |
| MA1849.1 | 11 | ACACGTAACTT |
| MA1850.1 | 15 | TTTTACACGTAACTT |
| MA1851.1 | 19 | CTTGTTCAACACGTTACCT |
| MA1852.1 | 15 | CTTCATCTTCAAGTA |
| MA1853.1 | 15 | CTTCTTCTTCACGCT |
| MA1854.1 | 19 | TTACTTGTTCTACACGTTA |
| MA1855.1 | 16 | CTTGTTTTACACGTTA |
| MA1856.1 | 11 | CTTAATTAATT |
| MA1857.1 | 14 | AAAAATGCCCTTAA |
| MA1858.1 | 14 | TTAGCAACTTGCAT |
| MA1859.1 | 15 | AGAAGCTTCTAGAAG |
| MA1860.1 | 19 | TCTAGAAGCTTCTAGAAGC |
| MA1861.1 | 13 | GAAGCTTCTAGAA |
| MA1862.1 | 13 | AAGCTTCTAGAAG |
| MA1863.1 | 15 | ATTTGGCTTTTCGGA |
| MA1877.1 | 12 | GCGCACGTGCGC |
| MA1878.1 | 13 | CAGCAGCAGCTGC |
| MA1880.1 | 15 | TTCTATTTTTGGGAA |
| MA1881.1 | 11 | TACAATGAATA |
| MA1882.1 | 10 | CTTAAACCCT |
| MA1968.1 | 11 | CACGTGGCATT |
| MA1969.1 | 14 | CGCGCACGTGCGCG |
| MA1970.1 | 12 | AAAAAGAAAAAA |
| MA1971.1 | 11 | CCGCCGCCGCC |
| MA1972.1 | 12 | GCCGCCGCCGCC |
| MA1973.1 | 13 | CCGCCGCCGCCGC |
| MA1974.1 | 11 | GGCGGCGGCGG |
| MA1975.1 | 13 | GCCGCCGCCGCCG |
| MA1976.1 | 12 | CGACGGCGACGG |
| MA1977.1 | 16 | CGCCGCCGCCGCCGCC |
| MA1978.1 | 10 | CGCCGCCGCC |
| MA1979.1 | 23 | AAAAAAGGAATATTCTTTTTCTT |
| MA1980.1 | 11 | ATCCTTATCCT |
| MA1981.1 | 13 | TACGTACGTACGT |
| MA1982.1 | 12 | AACAATAATTGA |
| MA1983.1 | 13 | TTTACCTAACTAA |
| MA1984.1 | 11 | AACCTTATCTG |
| MA1985.1 | 12 | CCGTGGTCCACG |
| MA1986.1 | 11 | GCCCACGCGGC |
| MA1987.1 | 13 | CACGTACGTACGT |
| MA1988.1 | 14 | TCATGCATGCATGT |
| MA1989.1 | 11 | CACGTGGCATA |
| MA1990.1 | 11 | TTCTGACACTT |
| MA1991.1 | 12 | ACCACCGACACC |
| MA1992.1 | 11 | CCACCGACAAT |
| MA1993.1 | 15 | CGTCGCCGCCGCAGC |
| MA1994.1 | 14 | TTCACACGTGCGAA |
| MA1995.1 | 13 | TACACGCAACTTA |
| MA1996.1 | 10 | TTCTGACACA |
| MA1997.1 | 14 | ATCACGGCGAGTAT |
| MA1998.1 | 12 | AAACAAGGCAAA |
| MA1999.1 | 12 | TAGAAACTTCTA |
| MA2001.1 | 13 | CCTCCACCGTCTC |
| MA2002.1 | 17 | CCGCCGCCGCCGCCGCC |
| MA2003.1 | 17 | AAAAGAATATTCCTTTT |
| MA2004.1 | 13 | TCCACCTACCACC |
| MA2005.1 | 14 | TCTACCAAACCAAA |
| MA2006.1 | 15 | TTTACCTAACTTTAT |
| MA2007.1 | 12 | TTAACGGTCAAA |
| MA2008.1 | 15 | TTTTACCTAACTATT |
| MA2009.1 | 13 | ACACGCTCCTCCA |
| MA2010.1 | 17 | AACTCCCAACTACCAAC |
| MA2011.1 | 11 | ATCTTATCCTT |
| MA2012.1 | 11 | AAAACCCTAAA |
| MA0008.3 | 15 | AATCAATAATTGAAT |
| MA0577.3 | 11 | TTGTACGGATA |
| MA0930.2 | 10 | CACGTGTCAT |
| MA0938.2 | 24 | TAGGTTACTTGTGTCACAAGTAAC |
| MA0964.2 | 12 | AGTCACGTGACT |
| MA0965.2 | 16 | AAAGGCACGTGCCTTT |
| MA0994.2 | 18 | CGGTGACGGCGGCGGTGG |
| MA1001.3 | 12 | CCGCCGCCACCG |
| MA1055.2 | 13 | ATTGTACGGATAA |
| MA1068.2 | 15 | ATGATGACGTCATCA |
| MA1069.2 | 15 | ATGATGACGTCATCA |
| MA1070.2 | 15 | ATGATGACGTCATCA |
| MA1079.2 | 20 | AAAAAAAGTCAACGCAAAAA |
| MA1081.2 | 16 | AAATTGGTCAACGATA |
| MA1083.2 | 14 | AAAGTCAACGCTTA |
| MA1087.2 | 15 | AAAAAAGTCAACGAT |
| MA1094.2 | 16 | AAAAAAGTCAACGATT |
| MA1163.2 | 14 | AAAGAATATTCTTT |
| MA1165.2 | 14 | TTAAAGATTCTGTT |
| MA1178.2 | 13 | ATCTAACGGTCAA |
| MA1210.2 | 13 | ATCAATAATTGAA |
| MA1213.2 | 13 | ATCAATTATTGTT |
| MA1219.2 | 14 | CATCACCGACCAAA |
| MA1231.2 | 14 | CCTTAGCCGCCGCC |
| MA1272.2 | 10 | TTAAAAAGTA |
| MA1307.2 | 18 | AATTGGTCAACGCTGGTT |
| MA1322.2 | 11 | TATCCGTACAA |
| MA1338.2 | 17 | AATTGCCACGTGTCATT |
| MA1351.2 | 11 | CACGTGGCATA |
| MA1359.2 | 14 | GTGCCACGTGGCAT |
| MA1360.2 | 14 | TTAGCACGTGGCAA |
| MA1386.2 | 13 | TTAAAGATTCTTT |
| MA1390.2 | 14 | CAAAGATTCCATAT |
| MA1392.2 | 11 | ATACGTTACAT |
| MA1427.2 | 13 | CACAAGTAATCTA |
| MA1663.2 | 13 | ACACAAGTAACAT |
| MA1665.2 | 14 | CTGGAAGGTTCTAG |
| MA1666.2 | 16 | CTAGAAGGTTCTAGAA |
| MA1667.2 | 12 | GCTTCCAGAAGC |
| MA1674.2 | 12 | AAGCAAGTAACT |
| MA1676.2 | 14 | TTGTTAAGTAACTA |
| MA1678.2 | 13 | ATGAAGAAACCTA |
| MA2049.1 | 12 | ACCACCGACACC |
| MA2050.1 | 11 | CCACCGACAAT |
| MA2051.1 | 15 | CGTCGCCGCCGCAGC |
| MA2052.1 | 14 | TTCACACGTGCGAA |
| MA2053.1 | 13 | TACACGCAACTTA |
| MA2054.1 | 10 | TTCTGACACA |
| MA2055.1 | 14 | ATCACGGCGAGTAT |
| MA2056.1 | 12 | AAACAAGGCAAA |
| MA2057.1 | 12 | TAGAAACTTCTA |
| MA2058.1 | 12 | AGAAGTTTCCAG |
| MA2059.1 | 13 | CCTCCACCGTCTC |
| MA2060.1 | 17 | CCGCCGCCGCCGCCGCC |
| MA2061.1 | 17 | AAAAGAATATTCCTTTT |
| MA2062.1 | 13 | TCCACCTACCACC |
| MA2063.1 | 14 | TCTACCAAACCAAA |
| MA2064.1 | 15 | TTTACCTAACTTTAT |
| MA2065.1 | 12 | TTAACGGTCAAA |
| MA2066.1 | 15 | TTTTACCTAACTATT |
| MA2067.1 | 13 | ACACGCTCCTCCA |
| MA2068.1 | 17 | AACTCCCAACTACCAAC |
| MA2069.1 | 11 | ATCTTATCCTT |
| MA2070.1 | 11 | AAAACCCTAAA |
| MA2071.1 | 24 | AGGTTGCGTGTAACACAAGTTACC |
| MA2072.1 | 11 | TACAAGTAATC |
| MA2073.1 | 24 | AAAGAAGCTTGTAGTACAAGCTAC |
| MA2074.1 | 12 | TACAAGCAACCT |
| MA2075.1 | 11 | TACAAGTAATC |
| MA2076.1 | 11 | AACAAGTTATC |
| MA2077.1 | 13 | ATCTCCGGCGACG |
| MA2078.1 | 13 | ATCTCCGGCGATG |
| MA2079.1 | 16 | ATACCCACCAACCAAA |
| MA2080.1 | 13 | TTCACCAAACATA |
| MA2081.1 | 17 | ATCTCCACCAACCCCAA |
| MA2082.1 | 10 | TTCACCTAAC |
| MA2083.1 | 11 | TACAAGAAACC |
| MA2084.1 | 11 | TACAAGCAACC |
| MA2085.1 | 24 | GTAACTTGTGACACAAGTTACCTT |
| MA2086.1 | 24 | TAGGTTGCGTGTAACACAAGTTAC |
| MA2087.1 | 14 | TTAACACGGCACCT |
| MA2088.1 | 11 | TACAAGCAATC |
| MA2089.1 | 13 | AAGAAGCAACCTA |
| MA2090.1 | 12 | AACAAGAAACCT |
| MA2091.1 | 13 | ATGCAAGCAATCT |
| MA2092.1 | 12 | AAACAAGTATAT |
| MA2093.1 | 12 | TTAATGATTGAT |
| MA2094.1 | 13 | TACAAGCAACCTA |
| MA1664.2 | 12 | GCTTCTGGAAGC |
Random model letter frequencies (--nrdb--):
A 0.275 C 0.225 G 0.225 T 0.275
| Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
|---|---|---|---|---|---|---|---|---|
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1068 | 1096 | 2.92e-16 | 9.22e-13 | CTAAACCCTAAACCCAAAACCCTAAACCC |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1079 | 1099 | 3.9e-12 | 1.26e-08 | ACCCTAAACCCTAAACCCAAA |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1066 | 1086 | 1.29e-11 | 4.28e-08 | AACCCAAAACCCTAAACCCCA |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1072 | 1092 | 1.58e-11 | 2.56e-08 | ACCCTAAACCCAAAACCCTAA |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1275 | 1295 | 2.56e-11 | 2.77e-08 | TCTCTAAACCCTAAACCCTAA |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1024 | 1044 | 4.32e-11 | 6.09e-08 | AACCCGAAACCCTAAACCCTA |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1065 | 1085 | 4.6e-11 | 3.72e-08 | ACCCAAAACCCTAAACCCCAA |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1073 | 1093 | 6.44e-11 | 6.09e-08 | AACCCTAAACCCAAAACCCTA |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1080 | 1100 | 7.36e-11 | 6.09e-08 | GACCCTAAACCCTAAACCCAA |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1061 | 1089 | 1.08e-10 | 1.71e-07 | CTAAACCCAAAACCCTAAACCCCAACCCC |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1023 | 1043 | 2.93e-10 | 1.9e-07 | ACCCGAAACCCTAAACCCTAT |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1276 | 1296 | 3.34e-10 | 2.21e-07 | CTCTCTAAACCCTAAACCCTA |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1054 | 1082 | 3.95e-10 | 4.16e-07 | CAAAACCCTAAACCCCAACCCCAAACCCG |
| MA1353.1 | MA1353.1.AT1G72740 | Potri.001G000200_2000_0 | + | 1082 | 1096 | 9.56e-10 | 1.78e-06 | gggtttagggtttag |
| MA1353.1 | MA1353.1.AT1G72740 | Potri.001G000200_2000_0 | + | 1278 | 1292 | 9.56e-10 | 1.78e-06 | gggtttagggtttag |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1019 | 1047 | 3.01e-09 | 2.37e-06 | TAAAACCCGAAACCCTAAACCCTATAGGT |
| MA1353.1 | MA1353.1.AT1G72740 | Potri.001G000200_2000_0 | + | 1068 | 1082 | 5.19e-09 | 6.47e-06 | gggtttagggttttg |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1034 | 1062 | 7.56e-09 | 4.78e-06 | CCAAACCCGAAACCCTAAAACCCGAAACC |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1269 | 1289 | 7.88e-09 | 4.34e-06 | AACCCTAAACCCTAAAAAATT |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1075 | 1103 | 1.04e-08 | 5.47e-06 | GAGGACCCTAAACCCTAAACCCAAAACCC |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1030 | 1050 | 1.05e-08 | 5.69e-06 | CCCTAAAACCCGAAACCCTAA |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1041 | 1069 | 1.28e-08 | 5.76e-06 | CCCAACCCCAAACCCGAAACCCTAAAACC |
| MA1353.1 | MA1353.1.AT1G72740 | Potri.001G000200_2000_0 | + | 1026 | 1040 | 1.44e-08 | 1.35e-05 | gggtttagggtttcg |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1059 | 1079 | 2.26e-08 | 1.07e-05 | AACCCTAAACCCCAACCCCAA |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1045 | 1065 | 2.44e-08 | 1.13e-05 | ACCCCAAACCCGAAACCCTAA |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1039 | 1059 | 3.07e-08 | 1.27e-05 | AACCCGAAACCCTAAAACCCG |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1026 | 1054 | 3.15e-08 | 1.24e-05 | GAAACCCTAAAACCCGAAACCCTAAACCC |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1038 | 1058 | 8.74e-08 | 3.54e-05 | ACCCGAAACCCTAAAACCCGA |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1040 | 1068 | 1.43e-07 | 5.02e-05 | CCAACCCCAAACCCGAAACCCTAAAACCC |
| MA1970.1 | MA1970.1.Zm00001d027846 | Potri.001G000200_2000_0 | + | 695 | 706 | 1.51e-07 | 0.000528 | aaaaagaaaaaa |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1058 | 1078 | 1.63e-07 | 5.86e-05 | ACCCTAAACCCCAACCCCAAA |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1031 | 1051 | 2.34e-07 | 8.62e-05 | ACCCTAAAACCCGAAACCCTA |
| MA1353.1 | MA1353.1.AT1G72740 | Potri.001G000200_2000_0 | + | 1041 | 1055 | 3.41e-07 | 0.000255 | ggttttagggtttcg |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1268 | 1288 | 3.6e-07 | 0.000117 | ACCCTAAACCCTAAAAAATTT |
| MA2070.1 | MA2070.1.TRB1 | Potri.001G000200_2000_0 | - | 1071 | 1081 | 3.7e-07 | 0.00133 | AAAACCCTAAA |
| MA2012.1 | MA2012.1.TRB1 | Potri.001G000200_2000_0 | - | 1071 | 1081 | 3.7e-07 | 0.00133 | AAAACCCTAAA |
| MA1856.1 | MA1856.1.ZHD10 | Potri.001G000200_2000_0 | + | 802 | 812 | 5.49e-07 | 0.00188 | cttaattaatt |
| MA2070.1 | MA2070.1.TRB1 | Potri.001G000200_2000_0 | - | 1029 | 1039 | 1.04e-06 | 0.00133 | GAAACCCTAAA |
| MA2070.1 | MA2070.1.TRB1 | Potri.001G000200_2000_0 | - | 1044 | 1054 | 1.04e-06 | 0.00133 | GAAACCCTAAA |
| MA2012.1 | MA2012.1.TRB1 | Potri.001G000200_2000_0 | - | 1029 | 1039 | 1.04e-06 | 0.00133 | GAAACCCTAAA |
| MA2012.1 | MA2012.1.TRB1 | Potri.001G000200_2000_0 | - | 1044 | 1054 | 1.04e-06 | 0.00133 | GAAACCCTAAA |
| MA0583.1 | MA0583.1.RAV1 | Potri.001G000200_2000_0 | + | 1213 | 1224 | 1.06e-06 | 0.00421 | ctcacctgggcc |
| MA1267.1 | MA1267.1.DOF5.8 | Potri.001G000200_2000_0 | - | 460 | 488 | 1.06e-06 | 0.00277 | TATTTTATTTGATTTGCTTTTTAAATCAT |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1264 | 1292 | 1.19e-06 | 0.000375 | CTAAACCCTAAACCCTAAAAAATTTTTGA |
| MA1839.1 | MA1839.1.MYB67 | Potri.001G000200_2000_0 | + | 1794 | 1814 | 1.24e-06 | 0.00434 | tctacctaacccactcccccc |
| MA1278.1 | MA1278.1.DOF3.4 | Potri.001G000200_2000_0 | - | 467 | 487 | 1.39e-06 | 0.00498 | ATTTTATTTGATTTGCTTTTT |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | + | 1696 | 1716 | 1.52e-06 | 0.000504 | aaccgaaaacccaaacaccca |
| MA1281.1 | MA1281.1.DOF5.1 | Potri.001G000200_2000_0 | + | 530 | 550 | 1.62e-06 | 0.00369 | taaaaagttaaatttaacaaa |
| MA1267.1 | MA1267.1.DOF5.8 | Potri.001G000200_2000_0 | - | 855 | 883 | 1.64e-06 | 0.00277 | TTTTTTACTTTGATAACTTTTTAAAATTA |
| MA1983.1 | MA1983.1.Zm00001d035604 | Potri.001G000200_2000_0 | + | 1794 | 1806 | 1.66e-06 | 0.00659 | tctacctaaccca |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | + | 1690 | 1710 | 1.69e-06 | 0.000498 | tggcaaaaccgaaaacccaaa |
| MA1682.1 | MA1682.1.TCX3 | Potri.001G000200_2000_0 | + | 1258 | 1271 | 1.97e-06 | 0.00583 | tcaaattcaaaaat |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1027 | 1055 | 2.04e-06 | 0.000543 | CGAAACCCTAAAACCCGAAACCCTAAACC |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1033 | 1061 | 2.06e-06 | 0.000543 | CAAACCCGAAACCCTAAAACCCGAAACCC |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1032 | 1052 | 2.27e-06 | 0.000681 | AACCCTAAAACCCGAAACCCT |
| MA1281.1 | MA1281.1.DOF5.1 | Potri.001G000200_2000_0 | + | 466 | 486 | 2.35e-06 | 0.00369 | taaaaagcaaatcaaataaaa |
| MA1327.2 | MA1327.2.ATHB-23 | Potri.001G000200_2000_0 | + | 803 | 812 | 2.43e-06 | 0.00768 | ttaattaatt |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | + | 1693 | 1721 | 2.51e-06 | 0.000609 | caaaaccgaaaacccaaacacccaaagcc |
| MA1356.1 | MA1356.1.TRP2 | Potri.001G000200_2000_0 | - | 1046 | 1066 | 2.51e-06 | 0.000693 | AACCCCAAACCCGAAACCCTA |
| MA1353.1 | MA1353.1.AT1G72740 | Potri.001G000200_2000_0 | + | 1271 | 1285 | 2.52e-06 | 0.00157 | ttttttagggtttag |
| MA1268.1 | MA1268.1.CDF5 | Potri.001G000200_2000_0 | - | 618 | 644 | 2.58e-06 | 0.00688 | ATTGAACTTTGTTATTTTTTATTTGTT |
| MA2070.1 | MA2070.1.TRB1 | Potri.001G000200_2000_0 | - | 1085 | 1095 | 2.63e-06 | 0.00168 | TAAACCCTAAA |
| MA2070.1 | MA2070.1.TRB1 | Potri.001G000200_2000_0 | - | 1274 | 1284 | 2.63e-06 | 0.00168 | TAAACCCTAAA |
| MA2070.1 | MA2070.1.TRB1 | Potri.001G000200_2000_0 | - | 1281 | 1291 | 2.63e-06 | 0.00168 | TAAACCCTAAA |
| MA2012.1 | MA2012.1.TRB1 | Potri.001G000200_2000_0 | - | 1085 | 1095 | 2.63e-06 | 0.00168 | TAAACCCTAAA |
| MA2012.1 | MA2012.1.TRB1 | Potri.001G000200_2000_0 | - | 1274 | 1284 | 2.63e-06 | 0.00168 | TAAACCCTAAA |
| MA2012.1 | MA2012.1.TRB1 | Potri.001G000200_2000_0 | - | 1281 | 1291 | 2.63e-06 | 0.00168 | TAAACCCTAAA |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1048 | 1076 | 2.94e-06 | 0.000664 | CCTAAACCCCAACCCCAAACCCGAAACCC |
| MA1280.1 | MA1280.1.DOF5.4 | Potri.001G000200_2000_0 | + | 530 | 543 | 3.07e-06 | 0.0104 | taaaaagttaaatt |
| MA1843.1 | MA1843.1.MYB92 | Potri.001G000200_2000_0 | + | 1794 | 1803 | 3.12e-06 | 0.012 | tctacctaac |
| MA1267.1 | MA1267.1.DOF5.8 | Potri.001G000200_2000_0 | - | 524 | 552 | 3.22e-06 | 0.00363 | TCTTTGTTAAATTTAACTTTTTAAAAATA |
| MA1277.1 | MA1277.1.DOF1.7 | Potri.001G000200_2000_0 | + | 689 | 709 | 3.26e-06 | 0.0113 | gttttgaaaaagaaaaaaaaa |
| MA1278.1 | MA1278.1.DOF3.4 | Potri.001G000200_2000_0 | - | 695 | 715 | 3.45e-06 | 0.00616 | TGGGGTTTTTTTTTTCTTTTT |
| MA1379.1 | MA1379.1.SOL1 | Potri.001G000200_2000_0 | + | 503 | 517 | 3.45e-06 | 0.011 | ttttataattcaaaa |
| MA1355.1 | MA1355.1.TRB2 | Potri.001G000200_2000_0 | - | 1280 | 1294 | 3.47e-06 | 0.00819 | CTCTAAACCCTAAAC |
| MA1882.1 | MA1882.1.TRP5 | Potri.001G000200_2000_0 | - | 1067 | 1076 | 3.67e-06 | 0.00639 | CCTAAACCCC |
| MA1970.1 | MA1970.1.Zm00001d027846 | Potri.001G000200_2000_0 | + | 251 | 262 | 3.91e-06 | 0.00685 | taaaagaaaaag |
| MA1268.1 | MA1268.1.CDF5 | Potri.001G000200_2000_0 | - | 680 | 706 | 3.97e-06 | 0.00688 | TTTTTTCTTTTTCAAAACTTATATTTT |
| MA2063.1 | MA2063.1.MYB93 | Potri.001G000200_2000_0 | + | 1794 | 1807 | 4.02e-06 | 0.014 | tctacctaacccac |
| MA2005.1 | MA2005.1.MYB93 | Potri.001G000200_2000_0 | + | 1794 | 1807 | 4.02e-06 | 0.0141 | tctacctaacccac |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1047 | 1075 | 4.3e-06 | 0.000906 | CTAAACCCCAACCCCAAACCCGAAACCCT |
| MA1355.1 | MA1355.1.TRB2 | Potri.001G000200_2000_0 | - | 1084 | 1098 | 4.51e-06 | 0.00819 | CCCTAAACCCTAAAC |
| MA1844.1 | MA1844.1.MYB94 | Potri.001G000200_2000_0 | + | 1729 | 1747 | 4.75e-06 | 0.0169 | ccccctcaaccactaaaca |
| MA1281.1 | MA1281.1.DOF5.1 | Potri.001G000200_2000_0 | + | 694 | 714 | 4.78e-06 | 0.005 | gaaaaagaaaaaaaaaacccc |
| MA1064.1 | MA1064.1.TCP2 | Potri.001G000200_2000_0 | + | 1218 | 1227 | 4.79e-06 | 0.00953 | ctgggcccac |
| MA1064.1 | MA1064.1.TCP2 | Potri.001G000200_2000_0 | - | 1218 | 1227 | 4.79e-06 | 0.00953 | GTGGGCCCAG |
| MA1267.1 | MA1267.1.DOF5.8 | Potri.001G000200_2000_0 | - | 688 | 716 | 5.03e-06 | 0.00424 | TTGGGGTTTTTTTTTTCTTTTTCAAAACT |
| MA0587.1 | MA0587.1.TCP16 | Potri.001G000200_2000_0 | - | 1218 | 1227 | 5.09e-06 | 0.0203 | GTGGGCCCAG |
| MA1831.1 | MA1831.1.MYB30 | Potri.001G000200_2000_0 | + | 1731 | 1745 | 5.25e-06 | 0.00934 | ccctcaaccactaaa |
| MA1831.1 | MA1831.1.MYB30 | Potri.001G000200_2000_0 | + | 1785 | 1799 | 5.34e-06 | 0.00934 | tccccaacctctacc |
| MA1278.1 | MA1278.1.DOF3.4 | Potri.001G000200_2000_0 | - | 862 | 882 | 5.53e-06 | 0.00658 | TTTTTACTTTGATAACTTTTT |
| MA1408.1 | MA1408.1.FaEOBII | Potri.001G000200_2000_0 | - | 1795 | 1804 | 5.82e-06 | 0.0222 | GGTTAGGTAG |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1271 | 1299 | 5.83e-06 | 0.00115 | CCCCTCTCTAAACCCTAAACCCTAAAAAA |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1016 | 1036 | 5.97e-06 | 0.00161 | ACCCTAAACCCTATAGGTCAG |
| MA1770.1 | MA1770.1.BZIP30 | Potri.001G000200_2000_0 | + | 1192 | 1201 | 6.1e-06 | 0.0243 | ggacagctgg |
| MA2087.1 | MA2087.1.NAC035 | Potri.001G000200_2000_0 | - | 262 | 275 | 6.33e-06 | 0.0251 | CGCACACGGCAACC |
| MA1751.1 | MA1751.1.NAC035 | Potri.001G000200_2000_0 | - | 262 | 275 | 6.33e-06 | 0.0251 | CGCACACGGCAACC |
| MA1161.1 | MA1161.1.TSO1 | Potri.001G000200_2000_0 | + | 527 | 541 | 6.44e-06 | 0.0148 | ttttaaaaagttaaa |
| MA1162.1 | MA1162.1.TCX2 | Potri.001G000200_2000_0 | + | 503 | 517 | 6.49e-06 | 0.0212 | ttttataattcaaaa |
| MA1685.1 | MA1685.1.ARF10 | Potri.001G000200_2000_0 | - | 38 | 52 | 6.58e-06 | 0.0261 | ATCAAGGGAGACATG |
| MA1882.1 | MA1882.1.TRP5 | Potri.001G000200_2000_0 | - | 1025 | 1034 | 6.59e-06 | 0.00639 | CCTAAACCCT |
| MA1882.1 | MA1882.1.TRP5 | Potri.001G000200_2000_0 | - | 1088 | 1097 | 6.59e-06 | 0.00639 | CCTAAACCCT |
| MA1882.1 | MA1882.1.TRP5 | Potri.001G000200_2000_0 | - | 1277 | 1286 | 6.59e-06 | 0.00639 | CCTAAACCCT |
| MA1682.1 | MA1682.1.TCX3 | Potri.001G000200_2000_0 | + | 506 | 519 | 6.62e-06 | 0.00981 | tataattcaaaaaa |
| MA1054.1 | MA1054.1.ARALYDRAFT_897773 | Potri.001G000200_2000_0 | + | 1218 | 1227 | 6.74e-06 | 0.0268 | ctgggcccac |
| MA1366.1 | MA1366.1.DF1 | Potri.001G000200_2000_0 | + | 873 | 888 | 6.95e-06 | 0.0222 | aaagtaaaaaaacaat |
| MA1274.1 | MA1274.1.DOF3.6 | Potri.001G000200_2000_0 | + | 325 | 345 | 7.36e-06 | 0.0243 | tttattttttatgattttatt |
| MA1695.1 | MA1695.1.ARF36 | Potri.001G000200_2000_0 | - | 36 | 49 | 7.44e-06 | 0.0295 | AAGGGAGACATGCC |
| MA1358.1 | MA1358.1.bHLH130 | Potri.001G000200_2000_0 | + | 163 | 173 | 7.55e-06 | 0.0293 | gaccacttgca |
| MA1273.1 | MA1273.1.DOF4.2 | Potri.001G000200_2000_0 | + | 690 | 708 | 7.56e-06 | 0.0254 | ttttgaaaaagaaaaaaaa |
| MA1428.1 | MA1428.1.TCP8 | Potri.001G000200_2000_0 | + | 1219 | 1227 | 7.73e-06 | 0.0308 | tgggcccac |
| MA1019.1 | MA1019.1.Glyma19g26560.1 | Potri.001G000200_2000_0 | + | 1219 | 1227 | 7.73e-06 | 0.0308 | tgggcccac |
| MA1328.1 | MA1328.1.ZHD9 | Potri.001G000200_2000_0 | + | 795 | 809 | 7.82e-06 | 0.0259 | taaaaaacttaatta |
| MA1354.1 | MA1354.1.AT4G12670 | Potri.001G000200_2000_0 | - | 1055 | 1083 | 7.94e-06 | 0.00148 | CCAAAACCCTAAACCCCAACCCCAAACCC |
| MA1355.1 | MA1355.1.TRB2 | Potri.001G000200_2000_0 | - | 1273 | 1287 | 8e-06 | 0.0097 | CCCTAAACCCTAAAA |
| MA1097.1 | MA1097.1.ARALYDRAFT_493022 | Potri.001G000200_2000_0 | + | 1220 | 1227 | 8.13e-06 | 0.0324 | gggcccac |
| MA1066.1 | MA1066.1.TCP23 | Potri.001G000200_2000_0 | + | 1220 | 1227 | 8.13e-06 | 0.0324 | gggcccac |
| MA1050.1 | MA1050.1.OsI_08196 | Potri.001G000200_2000_0 | + | 1220 | 1227 | 8.13e-06 | 0.0324 | gggcccac |
| MA1706.1 | MA1706.1.AT1G14600 | Potri.001G000200_2000_0 | - | 123 | 132 | 8.19e-06 | 0.0265 | ATACATTCTT |
| MA1352.1 | MA1352.1.TRP1 | Potri.001G000200_2000_0 | - | 1086 | 1106 | 8.29e-06 | 0.00206 | CTTGAGGACCCTAAACCCTAA |
| MA1268.1 | MA1268.1.CDF5 | Potri.001G000200_2000_0 | + | 318 | 344 | 8.31e-06 | 0.00959 | ctactgctttattttttatgattttat |
| MA1063.1 | MA1063.1.TCP19 | Potri.001G000200_2000_0 | + | 1218 | 1227 | 8.74e-06 | 0.0348 | ctgggcccac |
| MA2059.1 | MA2059.1.LBD13 | Potri.001G000200_2000_0 | - | 1451 | 1463 | 8.85e-06 | 0.0352 | TCTCCACCGTTCA |
| MA2001.1 | MA2001.1.LBD13 | Potri.001G000200_2000_0 | - | 1451 | 1463 | 8.85e-06 | 0.0352 | TCTCCACCGTTCA |
| MA1208.1 | MA1208.1.GT-2 | Potri.001G000200_2000_0 | - | 870 | 883 | 8.91e-06 | 0.0288 | TTTTTTACTTTGAT |
| MA0558.1 | MA0558.1.FLC | Potri.001G000200_2000_0 | + | 586 | 606 | 9.43e-06 | 0.0326 | tattttcaaaattagtaaaat |
| MA1357.1 | MA1357.1.bHLH80 | Potri.001G000200_2000_0 | - | 163 | 173 | 9.5e-06 | 0.0366 | TGCAAGTGGTC |
| MA1161.1 | MA1161.1.TSO1 | Potri.001G000200_2000_0 | + | 850 | 864 | 9.57e-06 | 0.0148 | aatattaattttaaa |
| MA1330.1 | MA1330.1.ZHD6 | Potri.001G000200_2000_0 | + | 799 | 813 | 9.72e-06 | 0.033 | aaacttaattaattc |
| MA1880.1 | MA1880.1.RIN | Potri.001G000200_2000_0 | + | 1410 | 1424 | 9.92e-06 | 0.031 | gcttatttttggata |
Command line:
fimo --thresh 1e-5 --oc /zongwenting/tool/output/motif/2023061450059 --thresh 1e-5 /zongwenting/software/motif_databases/JASPAR/JASPAR2022_CORE_plants_non-redundant.meme /zongwenting/tool/upload/motif/2023061450059_input.fa
Settings:
| output_directory = /zongwenting/tool/output/motif/2023061450059 | MEME file name = /zongwenting/software/motif_databases/JASPAR/JASPAR2022_CORE_plants_non-redundant.meme | sequence file name = /zongwenting/tool/upload/motif/2023061450059_input.fa |
| background file name = --nrdb-- | alphabet = DNA | max stored scores = 100000 |
| allow clobber = true | compute q-values = true | parse genomic coord. = false |
| text only = false | scan both strands = true | max strand = false |
| threshold type = p-value | output theshold = 1e-05 | pseudocount = 0.1 |
| alpha = 1 | verbosity = 2 |
This information can be useful in the event you wish to report a problem with the FIMO software.