http://192.168.164.12:81/ricewiki/api.php?action=feedcontributions&feedformat=atom&user=Duanjielin 2026-05-26T16:36:20Z User contributions MediaWiki 1.30.0 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174898 2014-05-31T04:45:17Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1[1.2].<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast[1].<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> 1 Department of Biochemistry, University of California, Boyce Hall, Riverside, CA 92521, USA<br /> 2 Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> <br /> ==References==<br /> 1 Chao-Feng Huang, Naoki Yamaji, Zhichang Chen and Jian Feng Ma. A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice.The Plant Journal (2012) 69, 857–867.<br /> 2 Paul B. Larsen, Jesse Cancel, Megan Rounds, Vanessa Ochoa.Arabidopsis ALS1 encodes a root tip and stele localized half type ABC transporter required for root growth in an aluminum toxic environment.Planta (2007) 225:1447–1458.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174897 2014-05-31T04:44:59Z

<p>Duanjielin: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast[1].<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> 1 Department of Biochemistry, University of California, Boyce Hall, Riverside, CA 92521, USA<br /> 2 Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> <br /> ==References==<br /> 1 Chao-Feng Huang, Naoki Yamaji, Zhichang Chen and Jian Feng Ma. A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice.The Plant Journal (2012) 69, 857–867.<br /> 2 Paul B. Larsen, Jesse Cancel, Megan Rounds, Vanessa Ochoa.Arabidopsis ALS1 encodes a root tip and stele localized half type ABC transporter required for root growth in an aluminum toxic environment.Planta (2007) 225:1447–1458.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:QQ%E5%9B%BE%E7%89%8720140531122930.jpg&diff=174893 2014-05-31T04:41:39Z

<p>Duanjielin: </p> <hr /> <div></div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174881 2014-05-31T04:29:56Z

<p>Duanjielin: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> 1 Department of Biochemistry, University of California, Boyce Hall, Riverside, CA 92521, USA<br /> 2 Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> <br /> ==References==<br /> 1 Chao-Feng Huang, Naoki Yamaji, Zhichang Chen and Jian Feng Ma. A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice.The Plant Journal (2012) 69, 857–867.<br /> 2 Paul B. Larsen, Jesse Cancel, Megan Rounds, Vanessa Ochoa.Arabidopsis ALS1 encodes a root tip and stele localized half type ABC transporter required for root growth in an aluminum toxic environment.Planta (2007) 225:1447–1458.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Ff.png&diff=174877 2014-05-31T04:26:56Z

<p>Duanjielin: </p> <hr /> <div></div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174875 2014-05-31T04:24:09Z

<p>Duanjielin: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> Gene amplication 5’-CAGTTTTCCAGACCAATACAAGAC-3’ 5’-GTTCTGCCGCGTCATCAAGT-3’ (used to amplify osals1-2)<br /> 5’ -GTTCTGCCGCGTCATCAAGT-3’ 5’-TGTGCCCGTCACATCATCTAG-3’ (used to amplify osals1-3)<br /> RT-PCR 5’-GGTCGTCAGTCTCTGCCTTGTC-3 5’-CCTCCCCATCATTTTCATTTGT-3’<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> 1 Department of Biochemistry, University of California, Boyce Hall, Riverside, CA 92521, USA<br /> 2 Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> <br /> ==References==<br /> 1 Chao-Feng Huang, Naoki Yamaji, Zhichang Chen and Jian Feng Ma. A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice.The Plant Journal (2012) 69, 857–867.<br /> 2 Paul B. Larsen, Jesse Cancel, Megan Rounds, Vanessa Ochoa.Arabidopsis ALS1 encodes a root tip and stele localized half type ABC transporter required for root growth in an aluminum toxic environment.Planta (2007) 225:1447–1458.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174866 2014-05-31T04:08:26Z

<p>Duanjielin: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> 1 Department of Biochemistry, University of California, Boyce Hall, Riverside, CA 92521, USA<br /> 2 Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> <br /> ==References==<br /> 1 Chao-Feng Huang, Naoki Yamaji, Zhichang Chen and Jian Feng Ma. A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice.The Plant Journal (2012) 69, 857–867.<br /> 2 Paul B. Larsen, Jesse Cancel, Megan Rounds, Vanessa Ochoa.Arabidopsis ALS1 encodes a root tip and stele localized half type ABC transporter required for root growth in an aluminum toxic environment.Planta (2007) 225:1447–1458.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174864 2014-05-31T04:05:44Z

<p>Duanjielin: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> 1 Department of Biochemistry, University of California, Boyce Hall, Riverside, CA 92521, USA<br /> 2 Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174862 2014-05-31T04:03:11Z

<p>Duanjielin: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Department of Biochemistry, University of California, Boyce Hall<br /> Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan<br /> Division of Genome and Biodiversity Research, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan.<br /> Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Koto-ku, Tokyo 135-0064, Japan.<br /> Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, Mish ima,Shizuoka 411-8540, Japan.Japan Biological Information Research Center, Japan Biological Informa tics<br /> Consortium, Koto-ku, Tokyo 135-0064, Japan.<br /> EMBL Outstation–European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, United Kingdom.<br /> Biometrics and Bioinformatics Unit, International Rice Research Institute,DAPO Box 7777, Metro Manila, Philippines.<br /> Department of Biology, McGill University, Montreal, Quebec H3A 1B1,Canada.<br /> Biology Department, Brookhaven National Laboratory, Upton, New York 11973, USA.<br /> Department of Genetics, The University of Georgia, Athens, Georgia, 3060 27223, USA.<br /> Waksman Institute of Microbiology, Rutgers University, Piscataway, New Jersey 08854, USA.<br /> Institute for Bioinformatics, GSF National Research Center for Environm entnd Health, D-85764 Neuherberg, Germany.<br /> Shanghai Institutes for Biological Sciences, Chinese Academy of Science s,500 Caobao Road, Shanghai 200233, China.<br /> Institute of the Society for Techno-innovation of Agriculture, Forestry and Fisheries, Tsukuba, Ibaraki 305-0854, Japan.<br /> Institute of Botany, Academia Sinica, Nankang, Taipei 11529, Taiwan.<br /> Tsukuba Division, Mitsubishi Space Software Co., Ltd., Tsukuba, Ibaraki3050032, Japan.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174859 2014-05-31T03:53:44Z

<p>Duanjielin: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174858 2014-05-31T03:51:35Z

<p>Duanjielin: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The<br /> green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap <br /> with the DsRed signal, which was localized at the nucleus and cytosol.Furthermore, subcellular<br /> localization of OsALS1 was also examined by introducing OsALS1–GFP to rice leaf proto-plasts.<br /> The signal was observed at the tonoplast.Taken together, these results indicate that OsALS1 is<br /> local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174857 2014-05-31T03:45:36Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids. OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots. The identity of OsALS1 to AtALS1 is 72% at the amino acid level. The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1.<br /> <br /> ===Expression===<br /> The<br /> green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap with the DsRed signal, which<br /> was localized at the nucleus and cytosol.Furthermore, subcellular localization of OsALS1 was also<br /> examined by introducing OsALS1–GFP to rice leaf proto-plasts. The signal was observed at the tonoplast.<br /> Taken together, these results indicate that OsALS1 is local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=174856 2014-05-31T03:42:08Z

<p>Duanjielin: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids (Figure S1a). OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots (Figure S2a). The identity of OsALS1 to AtALS1 is 72% at the amino acid level (Figures S2a and S3). The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1 (Figure S2a).<br /> OsALS1 encodes a half-size ABC transporter belonging to the TAP (transporter associated with antigen processing) sub-group, which has typical ABC transporter motifs includ- ing the Walker A motif, Q loop, ABC signature, and the Walker B and H motifs (Figure S3). OsALS1 is predicted to have five transmembrane domains (Figures S2b and S3).<br /> <br /> ===Expression===<br /> The<br /> green fluorescence of OsALS1–GFP was localized outside of the nucleus and did not overlap with the DsRed signal, which<br /> was localized at the nucleus and cytosol.Furthermore, subcellular localization of OsALS1 was also<br /> examined by introducing OsALS1–GFP to rice leaf proto-plasts. The signal was observed at the tonoplast.<br /> Taken together, these results indicate that OsALS1 is local-ized to the tonoplast.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167686 2014-05-07T09:42:30Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to AI. Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> OsALS1 (Os03g0755100) has 17 exons and 16 introns, and encodes a peptide with 641 amino acids (Figure S1a). OsALS1 is a single-copy gene in the rice genome. Phylo-genetic analysis identified homologs of OsALS1 in various species, from moss (Physcomitrella patens) and fern( Selaginella moellendorffii ) to higher plants including monocots and dicots (Figure S2a). The identity of OsALS1 to AtALS1 is 72% at the amino acid level (Figures S2a and S3). The closest homolog is AAM47580 from Sorghum bicolor, which shares 91% identity with OsALS1 (Figure S2a).<br /> OsALS1 encodes a half-size ABC transporter belonging to the TAP (transporter associated with antigen processing) sub-group, which has typical ABC transporter motifs includ- ing the Walker A motif, Q loop, ABC signature, and the Walker B and H motifs (Figure S3). OsALS1 is predicted to have five transmembrane domains (Figures S2b and S3).<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167685 2014-05-07T09:06:16Z

<p>Duanjielin: /* Evolution */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> <br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167684 2014-05-07T09:05:55Z

<p>Duanjielin: /* Evolution */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> The Os03g0755100 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and rice.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167683 2014-05-07T08:59:48Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167682 2014-05-07T08:58:50Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167681 2014-05-07T08:57:53Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for <br /> internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0755100&diff=167680 2014-05-07T08:29:02Z

<p>Duanjielin: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os03g0755100|<br /> Description = Similar to Transporter associated with antigen processing-like protein|<br /> Version = NM_001057846.1 GI:115455420 GeneID:4334151|<br /> Length = 5341 bp|<br /> Definition = Oryza sativa Japonica Group Os03g0755100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|<br /> AP = Chromosome 3:32000637..32005977|<br /> CDS = 32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788&lt;br&gt;,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074&lt;br&gt;,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302&lt;br&gt;,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008396:32000637..32005977<br /> source=RiceChromosome03<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057846.1 RefSeq:Os03g0755100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 3]]<br /> [[Category:Chromosome 3]]</div>

Duanjielin