RiceWiki - User contributions [en]

Os04g0430800

2017-03-13T06:57:18Z

Guangyi:

The rice '''''Os04g0430800''''' was reported as '''''OsERF#022''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0430800''''' '''''<=>''''' '''''OsERF#022, OsERF022, OsERF22'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0558700

2017-03-13T06:52:11Z

Guangyi:

The rice '''''Os02g0558700''''' was reported as '''''OsERF#021''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0558700''''' '''''<=>''''' '''''OsERF#021, OsERF021, OsERF21, AP2/EREBP#140, AP2/EREBP140'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os11g0242300

2017-03-13T06:49:34Z

Guangyi:

The rice '''''Os11g0242300''''' was reported as '''''OsERF#019''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os11g0242300''''' '''''<=>''''' '''''OsERF#019, OsERF019, OsERF19, AP2/EREBP#157, AP2/EREBP157'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os01g0885900

2017-03-13T06:46:17Z

Guangyi:

The rice '''''Os01g0885900''''' was reported as '''''OsERF#045''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os01g0885900''''' '''''<=>''''' '''''OsERF#017, OsERF017, OsERF17, AP2/EREBP#091, AP2/EREBP91'''''
===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0767700

2017-03-13T06:42:03Z

Guangyi:

The rice '''''Os02g0767700''''' was reported as '''''OsERF#126''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0767700''''' '''''<=>''''' '''''OsERF#126, OsERF126'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os06g0223100

2017-03-13T06:39:10Z

Guangyi:

The rice '''''Os06g0223100''''' was reported as '''''OsERF#013''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os06g0223100''''' '''''<=>''''' '''''OsERF#013, OsERF013, OsERF13, AP2/EREBP#143, AP2/EREBP143'''''
===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os08g0454000

2017-03-13T06:36:28Z

Guangyi:

The rice '''''Os08g0454000''''' was reported as '''''OsERF#012''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0454000''''' '''''<=>''''' '''''OsERF#012, OsERF012, OsERF12, OsDERF1, DERF1, AP2/EREBP#070, AP2/EREBP70'''''
===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os08g0454000

2017-03-13T06:36:01Z

Guangyi:

The rice '''''Os08g0454000''''' was reported as '''''OsERF#012''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0454000''''' '''''<=>''''' '''''OsERF#012, OsERF012, OsERF12, OsDERF1, DERF1, AP2/EREBP#070, AP2/EREBP70'''''
''===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0781300

2017-03-13T06:33:28Z

Guangyi:

The rice '''''Os02g0781300''''' was reported as '''''OsERF#011''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*''''Os02g0781300''''' '''''<=>''''' '''''OsERF#011, OsERF011, OsERF11, OsDERF9, DERF9, AP2/EREBP#083, AP2/EREBP83'''''
===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os03g0263000

2017-03-13T06:30:10Z

Guangyi:

The rice '''''Os03g0263000''''' was reported as '''''OsERF#009''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os03g0263000''''' '''''<=>''''' '''''OsERF#009, OsERF009, OsERF9, AP2/EREBP#135, AP2/EREBP135'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os04g0648900

2017-03-13T06:25:21Z

Guangyi:

The rice '''''Os04g0648900''''' was reported as '''''OsERF#008''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0648900''''' '''''<=>''''' '''''OsERF#008, OsERF008, OsERF8, AP2/EREBP#128, AP2/EREBP128'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os06g0166400

2017-03-13T06:22:57Z

Guangyi:

The rice '''''Os06g0166400''''' was reported as '''''OsERF#007''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os06g0166400''''' '''''<=>''''' '''''OsERF#007, OsERF007, OsERF7, AP2/EREBP#142, AP2/EREBP142'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov 8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os05g0572000

2017-03-13T06:19:55Z

Guangyi:

The rice '''''Os05g0572000''''' was reported as '''''OsERF#052''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os05g0572000''''' '''''<=>''''' '''''OsERF#052, OsERF052, OsERF52, AP2/EREBP#53, AP2/EREBP53'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov 8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os06g0222400

2017-03-13T06:16:40Z

Guangyi:

The rice '''''Os06g0222400''''' was reported as '''''OsERF#120''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os06g0222400''''' '''''<=>''''' '''''OsERF#120, OsERF120, OsERF120, AP2/EREBP#105, AP2/EREBP105'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0752800

2017-03-13T06:14:47Z

Guangyi:

The rice '''''Os04g0529100''''' was reported as '''''OsERF#049''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0529100''''' '''''<=>''''' '''''OsERF#049, OsERF049, OsERF49, AP2/EREBP#132, AP2/EREBP132'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os08g0408500

2017-03-13T06:13:35Z

Guangyi:

The rice '''''Os08g0408500''''' was reported as '''''OsERF#048''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0408500''''' '''''<=>''''' '''''OsERF#048, OsERF048, OsERF48, AP2/EREBP#170, AP2/EREBP170'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os03g0191900

2017-03-13T06:11:56Z

Guangyi:

The rice '''''Os03g0191900''''' was reported as '''''OsERF#047''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os03g0191900''''' '''''<=>''''' '''''OsERF#047, OsERF047, OsERF47, AP2/EREBP#121, AP2/EREBP121'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0638400

2017-03-13T06:09:19Z

Guangyi:

The rice '''''Os02g0638400''''' was reported as '''''OsERF#046''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0638400''''' '''''<=>''''' '''''OsERF#046, OsERF046, OsERF46'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os06g0166400

2017-03-09T13:07:42Z

Guangyi:

The rice '''''Os06g0166400''''' was reported as '''''OsERF#007''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os06g0166400''''' '''''<=>''''' '''''OsERF#007, OsERF007, OsERF7, AP2/EREBP#142, AP2/EREBP142'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and

development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem

determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain,

which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and

homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have

been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology,

Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov 8;298(5596):1238

-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os05g0572000

2017-03-09T12:58:08Z

Guangyi:

The rice '''''Os05g0572000''''' was reported as '''''OsERF#052''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os05g0572000''''' '''''<=>''''' '''''OsERF#052, OsERF052, OsERF52, AP2/EREBP#53, AP2/EREBP53'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and

development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem

determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain,

which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and

homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have

been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology,

Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov 8;298(5596):1238

-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os10g0371100

2017-03-09T11:40:19Z

Guangyi: /* Evolution */

The rice '''''Os10g0371100''''' was reported as '''''OsERF#051''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os10g0371100''''' '''''<=>''''' '''''OsERF#051, OsERF051, OsERF51, AP2/EREBP#156, AP2/EREBP156'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology,

Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov 8;298(5596):1238

-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os10g0371100

2017-03-09T09:50:36Z

Guangyi:

The rice '''''Os10g0371100''''' was reported as '''''OsERF#051''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os10g0371100''''' '''''<=>''''' '''''OsERF#051, OsERF051, OsERF51, AP2/EREBP#156, AP2/EREBP156'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain,

which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and

homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have

been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology,

Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov 8;298(5596):1238

-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os06g0222400

2017-03-09T09:37:57Z

Guangyi:

The rice '''''Os06g0222400''''' was reported as '''''OsERF#120''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os06g0222400''''' '''''<=>''''' '''''OsERF#120, OsERF120, AP2/EREBP#105, AP2/EREBP105'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0752800

2017-03-09T09:33:40Z

Guangyi:

The rice '''''Os02g0752800''''' was reported as '''''OsERF#049''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0752800''''' '''''<=>''''' '''''OsERF#049, OsERF049, OsERF49, AP2/EREBP#132, AP2/EREBP132'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os08g0408500

2017-03-09T09:31:37Z

Guangyi:

The rice '''''Os08g0408500''''' was reported as '''''OsERF#048''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0408500''''' '''''<=>''''' '''''OsERF#048, OsERF048, OsERF48, AP2/EREBP#170, AP2/EREBP170'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os03g0191900

2017-03-09T09:28:43Z

Guangyi:

The rice '''''Os03g0191900''''' was reported as '''''OsERF#047''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os03g0191900''''' '''''<=>''''' '''''OsERF#047, OsERF047, OsERF47, AP2/EREBP#121, AP2/EREBP121'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0638400

2017-03-09T09:25:08Z

Guangyi:

The rice '''''Os02g0638400''''' was reported as '''''OsERF#046''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0638400''''' '''''<=>''''' '''''OsERF#046, OsERF046, OsERF46'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os02g0638400

2017-03-09T09:22:40Z

Guangyi:

The rice '''''Os02g0638400''''' was reported as '''''OsERF#046''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0638400''''' '''''<=>''''' '''''OsERF#046, OsERF046, OsERF46'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

Os02g0638400

2017-03-08T09:02:53Z

Guangyi:

The rice '''''Os02g0638400''''' was reported as '''''OsERF#046''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os02g0638400''''' '''''<=>''''' '''''OsERF#046, OsERF046, OsERF46, AP2/EREBP#119, AP2/EREBP119'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological

processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological

processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et

al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo

development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and

RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family

proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in

addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as

more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in

the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced

Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

Os12g0634500

2017-02-25T05:39:49Z

Guangyi:

The rice '''''Os12g0634500''''' was reported as '''''OsbZIP89''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0634500''''' '''<=>''' '''''OsbZIP89,OsbZIP, bZIP89'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os12g0601800

2017-02-25T05:38:40Z

Guangyi:

The rice '''''Os12g0601800''''' was reported as '''''OsbZIP88''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0601800''''' '''<=>''' '''''OsbZIP88,OsbZIP, bZIP88'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os12g0560900

2017-02-25T05:36:48Z

Guangyi:

The rice '''''Os12g0560900''''' was reported as '''''OsbZIP87''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0560900''''' '''<=>''' '''''OsbZIP87,OsbZIP, bZIP87'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os12g0233800

2017-02-25T05:35:36Z

Guangyi:

The rice '''''Os12g0233800''''' was reported as '''''OsbZIP86''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0233800''''' '''<=>''' '''''OsbZIP86,OsbZIP, bZIP86'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os12g0162500

2017-02-25T05:33:30Z

Guangyi:

The rice '''''Os12g0162500''''' was reported as '''''OsbZIP84''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0162500''''' '''<=>''' '''''OsbZIP84,OsbZIP, bZIP84'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os12g0152900

2017-02-25T05:32:08Z

Guangyi:

The rice '''''Os12g0152900''''' was reported as '''''OsbZIP83''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0152900''''' '''<=>''' '''''OsbZIP83,OsbZIP, bZIP83'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os11g0218000

2017-02-25T05:29:53Z

Guangyi:

The rice '''''Os11g0218000''''' was reported as '''''OsbZIP82''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os11g0218000''''' '''<=>''' '''''OsbZIP82,OsbZIP, bZIP82'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]

Os11g0160500

2017-02-25T05:27:13Z

Guangyi:

The rice '''''Os11g0160500''''' was reported as '''''OsbZIP81''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os11g0160500''''' '''<=>''' '''''OsbZIP81,OsbZIP, bZIP81'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]

Os11g0154900

2017-02-25T05:25:29Z

Guangyi:

The rice '''''Os11g0154900''''' was reported as '''''OsbZIP80''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os11g0154900''''' '''<=>''' '''''OsbZIP80,OsbZIP, bZIP80'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

.

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]

Os11g0152700

2017-02-25T05:23:16Z

Guangyi:

The rice '''''Os11g0152700''''' was reported as '''''OsbZIP79''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os11g0152700''''' '''<=>''' '''''OsbZIP79,OsbZIP, bZIP79'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]

Os10g0531900

2017-02-25T05:21:27Z

Guangyi:

The rice '''''Os10g0531900''''' was reported as '''''OsbZIP78''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os10g0531900''''' '''<=>''' '''''OsbZIP78,OsbZIP, bZIP78'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==References==
Please input cited references here.

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]

Os09g0520400

2017-02-25T05:19:20Z

Guangyi:

The rice '''''Os09g0520400''''' was reported as '''''OsbZIP76''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os09g0520400''''' '''<=>''' '''''OsbZIP76,OsbZIP, bZIP76'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]

Os09g0516200

2017-02-25T05:18:07Z

Guangyi:

The rice '''''Os09g0516200''''' was reported as '''''OsbZIP75''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os09g0516200''''' '''<=>''' '''''OsbZIP75,OsbZIP, bZIP75'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]

Os09g0489500

2017-02-25T05:16:10Z

Guangyi:

The rice '''''Os09g0489500''''' was reported as '''''OsbZIP74''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os09g0489500''''' '''<=>''' '''''OsbZIP74,OsbZIP, bZIP74'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]

Os09g0474000

2017-02-25T05:15:06Z

Guangyi:

The rice '''''Os09g0474000''''' was reported as '''''OsbZIP73''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os09g0474000''''' '''<=>''' '''''OsbZIP73,OsbZIP, bZIP73'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]

Os09g0280500

2017-02-25T05:10:38Z

Guangyi:

The rice '''''Os09g0280500''''' was reported as '''''OsbZIP70''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os09g0280500''''' '''<=>''' '''''OsbZIP70,OsbZIP, bZIP70'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]

Os08g0549600

2017-02-25T05:08:22Z

Guangyi:

The rice '''''Os08g0549600''''' was reported as '''''OsbZIP69''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0549600''''' '''<=>''' '''''OsbZIP69,OsbZIP, bZIP69'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]

Os08g0543900

2017-02-25T05:06:13Z

Guangyi:

The rice '''''Os08g0543900''''' was reported as '''''OsbZIP68''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0543900''''' '''<=>''' '''''OsbZIP68,OsbZIP, bZIP68'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]

Os08g0487100

2017-02-25T05:04:53Z

Guangyi:

The rice '''''Os01g0174000''''' was reported as '''''OsbZIP67''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os01g0174000''''' '''<=>''' '''''OsbZIP67,OsbZIP, bZIP67'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]

Os08g0472000

2017-02-25T05:02:33Z

Guangyi:

The rice '''''Os08g0472000''''' was reported as '''''OsbZIP66''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0472000''''' '''<=>''' '''''OsbZIP66,OsbZIP, bZIP66'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
'''''You can also add sub-section(s) at will.'''''

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]

Os08g0357300

2017-02-25T05:01:38Z

Guangyi:

The rice '''''Os08g0357300''''' was reported as '''''OsbZIP65''''' in 2008 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os08g0357300''''' '''<=>''' '''''OsbZIP65,OsbZIP, bZIP65'''''
===Function===
* The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
* The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
* bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.

===Expression===
* The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
* bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.

===Evolution===
* The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
* Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
* Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
 
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==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India

==References==
<references>
* <ref name="ref1">
Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression
analysis of the basic leucine zipper transcription factor family in rice. Plant
Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID:
PMC2245831.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]