http://192.168.164.12:81/ricewiki/api.php?action=feedcontributions&feedformat=atom&user=Guanyuyan 2026-05-26T15:56:51Z User contributions MediaWiki 1.30.0 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171734 2014-05-24T08:33:49Z

<p>Guanyuyan: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> [[File:pic1.png]]<br /> [[File:pic2.png]]<br /> [[File:pic3.png]]<br /> [[File:pic4.png]]<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1.Department of Agronomy, National Taiwan University, Taipei, Taiwan, ROC<br /> <br /> 2.Stress Molecular Biology Laboratory (Key Laboratory of Ministry of Education), Alkali Soil Natural Environmenta Science Center (ASNESC), Northeast Forestry University 26 hexing Road, Harbin, 150040, China. <br /> <br /> 3.Departamento de Genética, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970; Departamento de Bioquímica e Biologia Molecular, <br /> Univ. Fed. Ceará, Fortaleza, CE, 60455-970; Departamento de Botânica, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970.<br /> <br /> 4.Department of Agricultural Chemistry and Institute of Biotechnology, National Taiwan University,Taipei, Taiwan, Republic of China; Department of Agronomy, National Taiwan University, Taipei, Taiwan, Republic of China<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Pic4.png&diff=171732 2014-05-24T08:33:08Z

<p>Guanyuyan: </p> <hr /> <div></div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171731 2014-05-24T08:32:02Z

<p>Guanyuyan: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> [[File:pic1.png]]<br /> [[File:pic2.png]]<br /> [[File:pic3.png]]<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1.Department of Agronomy, National Taiwan University, Taipei, Taiwan, ROC<br /> <br /> 2.Stress Molecular Biology Laboratory (Key Laboratory of Ministry of Education), Alkali Soil Natural Environmenta Science Center (ASNESC), Northeast Forestry University 26 hexing Road, Harbin, 150040, China. <br /> <br /> 3.Departamento de Genética, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970; Departamento de Bioquímica e Biologia Molecular, <br /> Univ. Fed. Ceará, Fortaleza, CE, 60455-970; Departamento de Botânica, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970.<br /> <br /> 4.Department of Agricultural Chemistry and Institute of Biotechnology, National Taiwan University,Taipei, Taiwan, Republic of China; Department of Agronomy, National Taiwan University, Taipei, Taiwan, Republic of China<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Pic3.png&diff=171728 2014-05-24T08:30:55Z

<p>Guanyuyan: </p> <hr /> <div></div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Pic2.png&diff=171726 2014-05-24T08:29:08Z

<p>Guanyuyan: </p> <hr /> <div></div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Pic1.png&diff=171723 2014-05-24T08:27:46Z

<p>Guanyuyan: </p> <hr /> <div></div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:111.jpg&diff=171721 2014-05-24T08:25:26Z

<p>Guanyuyan: </p> <hr /> <div></div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171718 2014-05-24T08:21:50Z

<p>Guanyuyan: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> [[File:pic1.png]]<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1.Department of Agronomy, National Taiwan University, Taipei, Taiwan, ROC<br /> <br /> 2.Stress Molecular Biology Laboratory (Key Laboratory of Ministry of Education), Alkali Soil Natural Environmenta Science Center (ASNESC), Northeast Forestry University 26 hexing Road, Harbin, 150040, China. <br /> <br /> 3.Departamento de Genética, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970; Departamento de Bioquímica e Biologia Molecular, <br /> Univ. Fed. Ceará, Fortaleza, CE, 60455-970; Departamento de Botânica, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970.<br /> <br /> 4.Department of Agricultural Chemistry and Institute of Biotechnology, National Taiwan University,Taipei, Taiwan, Republic of China; Department of Agronomy, National Taiwan University, Taipei, Taiwan, Republic of China<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171708 2014-05-24T08:07:36Z

<p>Guanyuyan: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1.Department of Agronomy, National Taiwan University, Taipei, Taiwan, ROC<br /> <br /> 2.Stress Molecular Biology Laboratory (Key Laboratory of Ministry of Education), Alkali Soil Natural Environmenta Science Center (ASNESC), Northeast Forestry University 26 hexing Road, Harbin, 150040, China. <br /> <br /> 3.Departamento de Genética, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970; Departamento de Bioquímica e Biologia Molecular, <br /> Univ. Fed. Ceará, Fortaleza, CE, 60455-970; Departamento de Botânica, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970.<br /> <br /> 4.Department of Agricultural Chemistry and Institute of Biotechnology, National Taiwan University,Taipei, Taiwan, Republic of China; Department of Agronomy, National Taiwan University, Taipei, Taiwan, Republic of China<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171707 2014-05-24T08:07:28Z

<p>Guanyuyan: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1.Department of Agronomy, National Taiwan University, Taipei, Taiwan, ROC<br /> <br /> 2.Stress Molecular Biology Laboratory (Key Laboratory of Ministry of Education), Alkali Soil Natural Environmenta Science Center (ASNESC), Northeast Forestry University 26 hexing Road, Harbin, 150040, China. <br /> <br /> 3.Departamento de Genética, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970; Departamento de Bioquímica e Biologia Molecular, <br /> Univ. Fed. Ceará, Fortaleza, CE, 60455-970; Departamento de Botânica, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970.<br /> <br /> 4.Department of Agricultural Chemistry and Institute of Biotechnology, National Taiwan University,Taipei, Taiwan, Republic of China; Department of Agronomy, National Taiwan University, Taipei, Taiwan, Republic of China<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171705 2014-05-24T08:07:10Z

<p>Guanyuyan: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1.Department of Agronomy, National Taiwan University, Taipei, Taiwan, ROC<br /> <br /> 2.Stress Molecular Biology Laboratory (Key Laboratory of Ministry of Education), Alkali Soil Natural Environmenta Science Center (ASNESC), Northeast Forestry University 26 hexing Road, Harbin, 150040, China. <br /> <br /> 3.Departamento de Genética, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970; Departamento de Bioquímica e Biologia Molecular, <br /> Univ. Fed. Ceará, Fortaleza, CE, 60455-970; Departamento de Botânica, Univ. Fed. Rio Grande do Sul, Porto Alegre, RS, 91501-970.<br /> <br /> 4.Department of Agricultural Chemistry and Institute of Biotechnology, National Taiwan University,Taipei, Taiwan, Republic of China; Department of Agronomy, National Taiwan University, Taipei, Taiwan, Republic of China<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171703 2014-05-24T08:03:00Z

<p>Guanyuyan: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao.<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings.<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> <br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao.<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl.<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> <br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB.<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> <br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu*. <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.). <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171701 2014-05-24T08:01:06Z

<p>Guanyuyan: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> 1.Ting-Shao Chou;Yun-Yang Chao;Ching Huei Kao<br /> Involvement of hydrogen peroxide in heat shock- and cadmium-induced expression of ascorbate peroxidase and glutathione reductase in leaves of rice seedlings<br /> Journal of Plant Physiology, 2012, 169(5): 478-486<br /> 2.Chwan-Yang Hong;Yi Ting Hsu;Yu-Chang Tsai;Ching Huei Kao<br /> Expression of ASCORBATE PEROXIDASE 8 in roots of rice (Oryza sativa L.) seedlings in response to NaCl<br /> Journal of Experimental Botany, 2007, 58(12): 3273-3283<br /> 3.Ribeiro,CW; Garighan,J; Rosa,SB<br /> Functional characterization of the rice peroxisomal ascorbate peroxidase.<br /> IV SIMPOSIO BRASILEIRO DE GENETICA MOLECULAR DE PLANTAS,2013<br /> 4.Qingjie Guan;Dexi Xia;Shenkui Liu* <br /> OsAPX4 gene response to several environmental stresses in rice (Oryza sativa L.) <br /> African Journal of Biotechnology, 2010, Vol.9(36): 5908-5913<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171700 2014-05-24T07:58:28Z

<p>Guanyuyan: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> The expression analysis revealed that OsAPx4 gene present higher expression in leaves, but also is expressed in roots and panicles of rice.Analysis of the OsAPx4 promoter revealed expression in leaves, vascular button and panicle, mainly in the conducting vessels. In situ hybridization experiments in panicles showed expression in lemma and peduncle[3].Expression of the gene OsAPX4, coding for ascorbate peroxidase in leaves and roots of rice were induced by abiotic stresses, such as NaCl, NaHCO3 and Na2CO3, polyethylene glycol (PEG) 6000, H2O2, CuCl2[4]. Expression of OsAPX4 gene in yeast can enhance the resistance to salts(NaCl, NaHCO3). Trans-genic Arabidopsis over-expressing the OsAPX4gene also exhibited growth advantage under NaCl and NaHCO3 stress environments. These examinations imply that the OsAPX4 gene plays an important role in the response of plants to several environmental stress conditions[4].<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0549100&diff=171699 2014-05-24T07:50:08Z

<p>Guanyuyan: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Plants use antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APx), glutathione reductase (GR), and catalase (CAT)as well as antioxidants catalase (AsA) and glutathione (GSH) to scavenge ROS[1]. The involvement of H2O2 in HS- and Cd-mediated changes in the expression of APx and GR in leaves of rice Seedlings has been reported. APx plays an important role in scavenging and in protecting cells against the toxic effects of H2O2 in higher plants. APx is located in different cellular compartments. Eight types of APx in rice have been described for Oryza sativa: two cytosolic (OsAPx1 and OsAPx2), two putative peroxi-somal (OsAPx3 and OsAPx4), and four chloroplastic isoforms (OsAPx5, OsAPx6, OsAPx7, and OsAPx8)[2]. OsAPx4 gene has its function related to the functions assigned to the peroxisome and probably acts in the physiological processes regulation, such as senescence[3].<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0549100|<br /> Description = Similar to Peroxisome type ascorbate peroxidase|<br /> Version = NM_001068974.1 GI:115477686 GeneID:4346247|<br /> Length = 3979 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0549100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:27643339..27647317|<br /> CDS = 27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194&lt;br&gt;,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:27643339..27647317<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068974.1 RefSeq:Os08g0549100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div>

Guanyuyan