http://192.168.164.12:81/ricewiki/api.php?action=feedcontributions&feedformat=atom&user=Jiangnanji RiceWiki - User contributions [en] 2026-10-12T17:59:05Z User contributions MediaWiki 1.30.0 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0330100&diff=170252 Os06g0330100 2014-05-20T23:37:43Z <p>Jiangnanji: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> The main gene resist to rice disease is Pi - 25. It have stronger resistance to leaf blast and panicle blast to rice blast fungus strains in China 92-183 (small ZC15)<br /> <br /> ===Expression===<br /> Pi - 25 in rice chromosome's markers between A7 and RG456, 6 figure distance is 1.7 cM and 1.5 cM respectively.<br /> The length of Pid3 cDNA is 2970 bp.Pid3 contains two exons and encoding a 923 amino acid composition of protein products, products containing the NBS LRR structure domain and MHD motif. Pid3Nip in the LRR structure domain. its transcription start site began to 2208th nucleotide, the CAG is replaced by the TAG. Japonica rice varieties Pid3 to pseudogenes are occurred after the process of indica japonica differentiation (Shang et al., 2009).<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Lihuang Zhu<br /> personal homepage:http://sourcedb.cas.cn/sourcedb_genetics_cas/yw/zjrc/pgr/200907/t20090721_2130981.html<br /> Jianli Wu <br /> personal home page:http://www.researchgate.net/profile/Jianli_Wu<br /> <br /> ==References==<br /> 1. Jie Chen;Yongfeng Shi;Wenzheng Liu;Rongyao Chai;Yaping Fu;Jieyun Zhuang;Jianli Wu<br /> A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae<br /> Journal of genetics and genomics, 2011, 38(5): 209-216 <br /> 2. Junjun Shang;Yong Tao;Xuewei Chen;Yan Zou;Cailin Lei;Jing Wang;Xiaobing Li;Xianfeng Zhao;Meijun Zhang;Zhike Lu;Jichen Xu;Zhukuan Cheng;Jianmin Wan;Lihuang Zhu<br /> Identification of a New Rice Blast Resistance Gene, Pid3, by Genomewide Comparison of Paired Nucleotide-Binding Site–Leucine-Rich Repeat Genes and Their Pseudogene Alleles Between the Two Sequenced Rice Genomes<br /> Genetics, 2009, 182(4): 1303-1311 <br /> 3. J.-L. Wu;Y.-Y. Fan;D.-B. Li;K.-L. Zheng;H. Leung and J.-Y. Zhuang<br /> Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates<br /> Theoretical and Applied Genetics, 2005, 111(1): 50-56 <br /> 4. 吴建利; 柴荣耀; 樊叶杨; 李德葆; 郑康乐; Hei LEUNG; 庄杰云<br /> 抗稻瘟病水稻材料谷梅2号中主效抗稻瘟病基因的成簇分布<br /> 中国水稻科学, 2004, 18(6): 567-569 <br /> 5. Jie-Yun Zhuang;Wen-Bin Ma;Jian-Li Wu;Rong-Yao Chai;Jun Lu;Ye-Yang Fan;Min-Zhong Jin;Hei Leung &amp; Kang-Le Zheng<br /> Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and RFLP in rice<br /> Euphytica, 2002, 128(3): 363-370 <br /> 6. Zhuang-J-Y, Wu-J-L, Fan-Y-Y, Rao-Z-M, Zheng-K-L<br /> Genetic drag between a blast resistance gene and QTL conditioning yield trait detected in a recombinant inbred line population in rice<br /> Rice Genetics Newsletters, 2001, 18(0): 69-70 <br /> 7. 吴建利; 庄杰云; 柴荣耀; 樊叶杨; 金敏忠; 李德葆; 郑康乐<br /> 水稻抗穗瘟基因的分子定位<br /> 植物病理学报, 2000, 30(2): 111-115 <br /> 8. Wu-J-L, Zhuang-J-Y, Fan-Y-Y, Li-D-B, Leung-H, Zheng-K-L<br /> Effectiveness of a resistance gene from Gumei 2 against leaf and neck blast under field conditions in China<br /> Rice Genetics Newsletters, 1999, 16(0): 90-92 <br /> 9. Zhuang-J-Y;Wu-J-L;Chai-R-Y;Fan-Y-Y;Jin-M-Z;Leung-H;Zheng-K-L<br /> Rapid identification of resistance gene analogs linked to two blast resistance genes in rice<br /> Rice Genetics Newsletters, 1998, 15(): 125-127 <br /> 10. Zhuang-J Y, Chai-R Y, Ma-W, B Lu-J, Jin-M Z, Zheng-K-L<br /> Genetic analysis of the blast resistance at vegetative and reproductive stages in rice<br /> Rice Genetics Newsletters, 1997, 14(0): 62-64<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0330100|<br /> Description = Disease resistance protein family protein|<br /> Version = NM_001064074.2 GI:297605748 GeneID:4340920|<br /> Length = 2775 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0330100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:13123254..13126028|<br /> CDS = 13123254..13123817,13123893..13126028|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIR EVKGELESIHAFLQAAERFKDADETTSAFVKQVRSLALSIEDVVDEFTYELGEGDGRM GMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKSMAGRRSSN WRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSVWGMSGIGKTALVANVYNA IKADFDTCAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSY LENKRYVLVLDDVWNANVWFDSKDAFEDGNIGRIILTSRNYDVALLAHETHIINLQPL EKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLPIAIVCIGRLLSFQGSTY SDWEKVYKNLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKS LVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEVQMHDILRV LALSKAHEQNFCIVVNHSRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPN VSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGLFNLRFLGLRRTKISKLPSSIGRLK ILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPLRICSMTT LQTLLLMEASSQMVHHLGSLVELRTFRISKADSSQEVLHLESLKPPPLLQKLFLQGTL SHESLPHFVSVSNLNNLTFLRLAGSRIDENAFLNLEGLQQLVKLQLYDAYDGMNIYFH ENSFPKLRILKIWGAPHLNEIKMTKGAVASLTDLKFLLCPNLKQLPCGIEHVRTLEEL TLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2212..2775#1..2136#atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggtgcgaagttgccattgtgagcagttgttcatggccatcactaatatgattcatcttacccgtcttgggatctaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064074.2 RefSeq:Os06g0330100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0330100&diff=170251 Os06g0330100 2014-05-20T23:34:08Z <p>Jiangnanji: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> ===Expression===<br /> Pi - 25 in rice chromosome's markers between A7 and RG456, 6 figure distance is 1.7 cM and 1.5 cM respectively.<br /> The length of Pid3 cDNA is 2970 bp.Pid3 contains two exons and encoding a 923 amino acid composition of protein products, products containing the NBS LRR structure domain and MHD motif. Pid3Nip in the LRR structure domain. its transcription start site began to 2208th nucleotide, the CAG is replaced by the TAG. Japonica rice varieties Pid3 to pseudogenes are occurred after the process of indica japonica differentiation (Shang et al., 2009).<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Lihuang Zhu<br /> personal homepage:http://sourcedb.cas.cn/sourcedb_genetics_cas/yw/zjrc/pgr/200907/t20090721_2130981.html<br /> Jianli Wu <br /> personal home page:http://www.researchgate.net/profile/Jianli_Wu<br /> <br /> ==References==<br /> 1. Jie Chen;Yongfeng Shi;Wenzheng Liu;Rongyao Chai;Yaping Fu;Jieyun Zhuang;Jianli Wu<br /> A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae<br /> Journal of genetics and genomics, 2011, 38(5): 209-216 <br /> 2. Junjun Shang;Yong Tao;Xuewei Chen;Yan Zou;Cailin Lei;Jing Wang;Xiaobing Li;Xianfeng Zhao;Meijun Zhang;Zhike Lu;Jichen Xu;Zhukuan Cheng;Jianmin Wan;Lihuang Zhu<br /> Identification of a New Rice Blast Resistance Gene, Pid3, by Genomewide Comparison of Paired Nucleotide-Binding Site–Leucine-Rich Repeat Genes and Their Pseudogene Alleles Between the Two Sequenced Rice Genomes<br /> Genetics, 2009, 182(4): 1303-1311 <br /> 3. J.-L. Wu;Y.-Y. Fan;D.-B. Li;K.-L. Zheng;H. Leung and J.-Y. Zhuang<br /> Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates<br /> Theoretical and Applied Genetics, 2005, 111(1): 50-56 <br /> 4. 吴建利; 柴荣耀; 樊叶杨; 李德葆; 郑康乐; Hei LEUNG; 庄杰云<br /> 抗稻瘟病水稻材料谷梅2号中主效抗稻瘟病基因的成簇分布<br /> 中国水稻科学, 2004, 18(6): 567-569 <br /> 5. Jie-Yun Zhuang;Wen-Bin Ma;Jian-Li Wu;Rong-Yao Chai;Jun Lu;Ye-Yang Fan;Min-Zhong Jin;Hei Leung &amp; Kang-Le Zheng<br /> Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and RFLP in rice<br /> Euphytica, 2002, 128(3): 363-370 <br /> 6. Zhuang-J-Y, Wu-J-L, Fan-Y-Y, Rao-Z-M, Zheng-K-L<br /> Genetic drag between a blast resistance gene and QTL conditioning yield trait detected in a recombinant inbred line population in rice<br /> Rice Genetics Newsletters, 2001, 18(0): 69-70 <br /> 7. 吴建利; 庄杰云; 柴荣耀; 樊叶杨; 金敏忠; 李德葆; 郑康乐<br /> 水稻抗穗瘟基因的分子定位<br /> 植物病理学报, 2000, 30(2): 111-115 <br /> 8. Wu-J-L, Zhuang-J-Y, Fan-Y-Y, Li-D-B, Leung-H, Zheng-K-L<br /> Effectiveness of a resistance gene from Gumei 2 against leaf and neck blast under field conditions in China<br /> Rice Genetics Newsletters, 1999, 16(0): 90-92 <br /> 9. Zhuang-J-Y;Wu-J-L;Chai-R-Y;Fan-Y-Y;Jin-M-Z;Leung-H;Zheng-K-L<br /> Rapid identification of resistance gene analogs linked to two blast resistance genes in rice<br /> Rice Genetics Newsletters, 1998, 15(): 125-127 <br /> 10. Zhuang-J Y, Chai-R Y, Ma-W, B Lu-J, Jin-M Z, Zheng-K-L<br /> Genetic analysis of the blast resistance at vegetative and reproductive stages in rice<br /> Rice Genetics Newsletters, 1997, 14(0): 62-64<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0330100|<br /> Description = Disease resistance protein family protein|<br /> Version = NM_001064074.2 GI:297605748 GeneID:4340920|<br /> Length = 2775 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0330100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:13123254..13126028|<br /> CDS = 13123254..13123817,13123893..13126028|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIR EVKGELESIHAFLQAAERFKDADETTSAFVKQVRSLALSIEDVVDEFTYELGEGDGRM GMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKSMAGRRSSN WRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSVWGMSGIGKTALVANVYNA IKADFDTCAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSY LENKRYVLVLDDVWNANVWFDSKDAFEDGNIGRIILTSRNYDVALLAHETHIINLQPL EKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLPIAIVCIGRLLSFQGSTY SDWEKVYKNLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKS LVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEVQMHDILRV LALSKAHEQNFCIVVNHSRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPN VSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGLFNLRFLGLRRTKISKLPSSIGRLK ILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPLRICSMTT LQTLLLMEASSQMVHHLGSLVELRTFRISKADSSQEVLHLESLKPPPLLQKLFLQGTL SHESLPHFVSVSNLNNLTFLRLAGSRIDENAFLNLEGLQQLVKLQLYDAYDGMNIYFH ENSFPKLRILKIWGAPHLNEIKMTKGAVASLTDLKFLLCPNLKQLPCGIEHVRTLEEL TLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2212..2775#1..2136#atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggtgcgaagttgccattgtgagcagttgttcatggccatcactaatatgattcatcttacccgtcttgggatctaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064074.2 RefSeq:Os06g0330100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=170181 Os04g0615000 2014-05-20T14:46:15Z <p>Jiangnanji: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> Nal chromosome 1 in 4, the length of 2168 bp cDNA, contains five exons and encoding a 582 amino acid composition of protein. Nal1 mutant: a lack of exon 4 30 bp sequence. Nal1 encoding a plant protein, the biochemical function of the unknown, locating in the nucleus and cytoplasm. Nal1 expressed in leaf sheath, leaf, stem and young ear, in situ hybridization showed that Nal1 expressed in vascular tissue volume and high; Nal1 mutation significantly reduced the auxin polar transport activity, suggests that Nal1 affected rice auxin polar transport; Nal1 mutation after narrow leaves, leaf number of vascular bundles, reducing the number of vascular bundle arrangement change, d Nal1 adjust tube bundle arrangement mode, will play an important role in the lateral growth of blade; Reduced Numbers of nal1 internode of mutant cells, internodes shorter, plant height, so that nal1 rice internodes cell division. <br /> Rice flag leaf width of main effect QTL qFLW4 fine positioning shows that may be caused by the variable shear NAL1 gene (Chen et al. 2011).<br /> <br /> ===Expression===<br /> nal-1 localized in chromosome 4, the length of its cDNA is 2168 bp. It contains five exons and encoding a protein with 582 amino acid.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Hu Peisong<br /> personal homepage:http://www.zoominfo.com/p/Hu-Peisong/209130130<br /> <br /> ==References==<br /> 1. Mingliang Chen;Ju Luo;Gaoneng Shao;Xiangjin Wei;Shaoqing Tang;Zhonghua Sheng;Jian Song;Peisong Hu<br /> Fine mapping of a major QTL for flag leaf width in rice, qFLW4, which might be caused by alternative splicing of NAL1<br /> Plant Cell Reports, 2011, 31(5): 863-872 <br /> 2. Jing Qi;Qian Qian;Qingyun Bu;Shuyu Li;Qian Chen;Jiaqiang Sun;Wenxing Liang;Yihua Zhou;Chengcai Chu;Xugang Li;Fugang Ren;Klaus Palme;Bingran Zhao;Jinfeng Chen;Mingsheng Chen;Chuanyou Li<br /> Mutation of the Rice Narrow leaf1 Gene, Which Encodes a Novel Protein, Affects Vein Patterning and Polar Auxin Transport<br /> Plant Physiology, 2008, 147(4): 1947-1959<br /> 3. McSteen, P. (2010). &quot;Auxin and monocot development.&quot; Cold Spring Harbor perspectives in biology 2(3): a001479.<br /> 4. Wu, C., et al. (2010). &quot;Isolation and characterization of a rice mutant with narrow and rolled leaves.&quot; Planta 232(2): 313-324.<br /> 5. Ding, X., et al. (2011). &quot;Evaluation of near-isogenic lines for drought resistance QTL and fine mapping of a locus affecting flag leaf width, spikelet number, and root volume in rice.&quot; Theoretical and applied genetics 123(5): 815-826.<br /> 6. Peer, W. A., et al. (2011). &quot;Seven things we think we know about auxin transport.&quot; Molecular Plant 4(3): 487-504.<br /> 7. Griffiths, H., et al. (2013). &quot;You're so vein: bundle sheath physiology, phylogeny and evolution in C3 and C4 plants.&quot; Plant, cell &amp; environment 36(2): 249-261.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=170151 Os04g0615000 2014-05-20T14:20:57Z <p>Jiangnanji: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> Nal chromosome 1 in 4, the length of 2168 bp cDNA, contains five exons and encoding a 582 amino acid composition of protein. Nal1 mutant: a lack of exon 4 30 bp sequence. Nal1 encoding a plant protein, the biochemical function of the unknown, locating in the nucleus and cytoplasm. Nal1 expressed in leaf sheath, leaf, stem and young ear, in situ hybridization showed that Nal1 expressed in vascular tissue volume and high; Nal1 mutation significantly reduced the auxin polar transport activity, suggests that Nal1 affected rice auxin polar transport; Nal1 mutation after narrow leaves, leaf number of vascular bundles, reducing the number of vascular bundle arrangement change, d Nal1 adjust tube bundle arrangement mode, will play an important role in the lateral growth of blade; Reduced Numbers of nal1 internode of mutant cells, internodes shorter, plant height, so that nal1 rice internodes cell division. <br /> Rice flag leaf width of main effect QTL qFLW4 fine positioning shows that may be caused by the variable shear NAL1 gene (Chen et al. 2011).<br /> <br /> ===Expression===<br /> nal-1 localized in chromosome 4, the length of its cDNA is 2168 bp. It contains five exons and encoding a protein with 582 amino acid.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Hu Peisong<br /> personal homepage:http://www.zoominfo.com/p/Hu-Peisong/209130130<br /> <br /> ==References==<br /> 1. Mingliang Chen;Ju Luo;Gaoneng Shao;Xiangjin Wei;Shaoqing Tang;Zhonghua Sheng;Jian Song;Peisong Hu<br /> Fine mapping of a major QTL for flag leaf width in rice, qFLW4, which might be caused by alternative splicing of NAL1<br /> Plant Cell Reports, 2011, 31(5): 863-872 <br /> 2. Jing Qi;Qian Qian;Qingyun Bu;Shuyu Li;Qian Chen;Jiaqiang Sun;Wenxing Liang;Yihua Zhou;Chengcai Chu;Xugang Li;Fugang Ren;Klaus Palme;Bingran Zhao;Jinfeng Chen;Mingsheng Chen;Chuanyou Li<br /> Mutation of the Rice Narrow leaf1 Gene, Which Encodes a Novel Protein, Affects Vein Patterning and Polar Auxin Transport<br /> Plant Physiology, 2008, 147(4): 1947-1959<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0330100&diff=170120 Os06g0330100 2014-05-20T13:49:00Z <p>Jiangnanji: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Lihuang Zhu<br /> personal homepage:http://sourcedb.cas.cn/sourcedb_genetics_cas/yw/zjrc/pgr/200907/t20090721_2130981.html<br /> Jianli Wu <br /> personal home page:http://www.researchgate.net/profile/Jianli_Wu<br /> <br /> ==References==<br /> 1. Jie Chen;Yongfeng Shi;Wenzheng Liu;Rongyao Chai;Yaping Fu;Jieyun Zhuang;Jianli Wu<br /> A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae<br /> Journal of genetics and genomics, 2011, 38(5): 209-216 <br /> 2. Junjun Shang;Yong Tao;Xuewei Chen;Yan Zou;Cailin Lei;Jing Wang;Xiaobing Li;Xianfeng Zhao;Meijun Zhang;Zhike Lu;Jichen Xu;Zhukuan Cheng;Jianmin Wan;Lihuang Zhu<br /> Identification of a New Rice Blast Resistance Gene, Pid3, by Genomewide Comparison of Paired Nucleotide-Binding Site–Leucine-Rich Repeat Genes and Their Pseudogene Alleles Between the Two Sequenced Rice Genomes<br /> Genetics, 2009, 182(4): 1303-1311 <br /> 3. J.-L. Wu;Y.-Y. Fan;D.-B. Li;K.-L. Zheng;H. Leung and J.-Y. Zhuang<br /> Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates<br /> Theoretical and Applied Genetics, 2005, 111(1): 50-56 <br /> 4. 吴建利; 柴荣耀; 樊叶杨; 李德葆; 郑康乐; Hei LEUNG; 庄杰云<br /> 抗稻瘟病水稻材料谷梅2号中主效抗稻瘟病基因的成簇分布<br /> 中国水稻科学, 2004, 18(6): 567-569 <br /> 5. Jie-Yun Zhuang;Wen-Bin Ma;Jian-Li Wu;Rong-Yao Chai;Jun Lu;Ye-Yang Fan;Min-Zhong Jin;Hei Leung &amp; Kang-Le Zheng<br /> Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and RFLP in rice<br /> Euphytica, 2002, 128(3): 363-370 <br /> 6. Zhuang-J-Y, Wu-J-L, Fan-Y-Y, Rao-Z-M, Zheng-K-L<br /> Genetic drag between a blast resistance gene and QTL conditioning yield trait detected in a recombinant inbred line population in rice<br /> Rice Genetics Newsletters, 2001, 18(0): 69-70 <br /> 7. 吴建利; 庄杰云; 柴荣耀; 樊叶杨; 金敏忠; 李德葆; 郑康乐<br /> 水稻抗穗瘟基因的分子定位<br /> 植物病理学报, 2000, 30(2): 111-115 <br /> 8. Wu-J-L, Zhuang-J-Y, Fan-Y-Y, Li-D-B, Leung-H, Zheng-K-L<br /> Effectiveness of a resistance gene from Gumei 2 against leaf and neck blast under field conditions in China<br /> Rice Genetics Newsletters, 1999, 16(0): 90-92 <br /> 9. Zhuang-J-Y;Wu-J-L;Chai-R-Y;Fan-Y-Y;Jin-M-Z;Leung-H;Zheng-K-L<br /> Rapid identification of resistance gene analogs linked to two blast resistance genes in rice<br /> Rice Genetics Newsletters, 1998, 15(): 125-127 <br /> 10. Zhuang-J Y, Chai-R Y, Ma-W, B Lu-J, Jin-M Z, Zheng-K-L<br /> Genetic analysis of the blast resistance at vegetative and reproductive stages in rice<br /> Rice Genetics Newsletters, 1997, 14(0): 62-64<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0330100|<br /> Description = Disease resistance protein family protein|<br /> Version = NM_001064074.2 GI:297605748 GeneID:4340920|<br /> Length = 2775 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0330100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:13123254..13126028|<br /> CDS = 13123254..13123817,13123893..13126028|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIR EVKGELESIHAFLQAAERFKDADETTSAFVKQVRSLALSIEDVVDEFTYELGEGDGRM GMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKSMAGRRSSN WRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSVWGMSGIGKTALVANVYNA IKADFDTCAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSY LENKRYVLVLDDVWNANVWFDSKDAFEDGNIGRIILTSRNYDVALLAHETHIINLQPL EKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLPIAIVCIGRLLSFQGSTY SDWEKVYKNLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKS LVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEVQMHDILRV LALSKAHEQNFCIVVNHSRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPN VSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGLFNLRFLGLRRTKISKLPSSIGRLK ILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPLRICSMTT LQTLLLMEASSQMVHHLGSLVELRTFRISKADSSQEVLHLESLKPPPLLQKLFLQGTL SHESLPHFVSVSNLNNLTFLRLAGSRIDENAFLNLEGLQQLVKLQLYDAYDGMNIYFH ENSFPKLRILKIWGAPHLNEIKMTKGAVASLTDLKFLLCPNLKQLPCGIEHVRTLEEL TLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2212..2775#1..2136#atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggtgcgaagttgccattgtgagcagttgttcatggccatcactaatatgattcatcttacccgtcttgggatctaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064074.2 RefSeq:Os06g0330100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=170117 Os04g0615000 2014-05-20T13:37:50Z <p>Jiangnanji: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> <br /> ===Expression===<br /> nal-1 localized in chromosome 4, the length of its cDNA is 2168 bp. It contains five exons and encoding a protein with 582 amino acid.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Hu Peisong<br /> personal homepage:http://www.zoominfo.com/p/Hu-Peisong/209130130<br /> <br /> ==References==<br /> 1. Mingliang Chen;Ju Luo;Gaoneng Shao;Xiangjin Wei;Shaoqing Tang;Zhonghua Sheng;Jian Song;Peisong Hu<br /> Fine mapping of a major QTL for flag leaf width in rice, qFLW4, which might be caused by alternative splicing of NAL1<br /> Plant Cell Reports, 2011, 31(5): 863-872 <br /> 2. Jing Qi;Qian Qian;Qingyun Bu;Shuyu Li;Qian Chen;Jiaqiang Sun;Wenxing Liang;Yihua Zhou;Chengcai Chu;Xugang Li;Fugang Ren;Klaus Palme;Bingran Zhao;Jinfeng Chen;Mingsheng Chen;Chuanyou Li<br /> Mutation of the Rice Narrow leaf1 Gene, Which Encodes a Novel Protein, Affects Vein Patterning and Polar Auxin Transport<br /> Plant Physiology, 2008, 147(4): 1947-1959<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0117000&diff=170108 Os08g0117000 2014-05-20T13:28:32Z <p>Jiangnanji: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Map-based cloning found PSS1 gene encoding a driver-like protein of class1.<br /> PSS1 is a new drive protein 1 family members. It has very important significance to the dynamics of rice male meiosis chromosome and male gamete formation and pollen sac cracking.<br /> <br /> ===Expression===<br /> PSS1 widely expressed in various organs, which express the most in the ear. In addition PSS1 expression was significantly raised in anther development, to the male meiosis reached its peak.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Jianmin Wan<br /> personal homepage:<br /> http://www.jipb.net/Web/Jianmin%20Wan.asp<br /> <br /> ==References==<br /> 1. Shirong Zhou;Yang Wang;Wanchang Li;Zhigang Zhao;Yulong Ren;Yong Wang;Suhai Gu;Qibing Lin;Dan Wang;Ling Jiang;Ning Su;Xin Zhang;Linglong Liu;Zhijun Cheng;Cailin Lei;Jiulin Wang;Xiuping Guo;Fuqing Wu;Hiroshi Ikehashi;Haiyang Wang;Jianmin Wan<br /> Pollen Semi-Sterility1 Encodes a Kinesin-1–Like Protein Important for Male Meiosis, Anther Dehiscence, and Fertility in Rice<br /> The Plant Cell, 2011, 23(1): 111-129 <br /> 2. Wanchang Li;Ling Jiang;Shirong Zhou;Chunming Wang;Linglong Liu;Liangming Chen;Hiroshi Ikehashi;Jianmin Wan<br /> Fine mapping of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.)<br /> Theoretical and Applied Genetics, 2007, 114(5): 939-946<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0117000|<br /> Description = Kinesin, motor region domain containing protein|<br /> Version = NM_001067393.2 GI:297607893 GeneID:4344521|<br /> Length = 3468 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0117000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:947841..951308|<br /> CDS = 947841..947954,948312..948414,948551..948594,948834..948863,948962..949084&lt;br&gt;,949163..949188,949281..949362,949484..949525,949606..949639&lt;br&gt;,949771..949798,950126..950312,950370..950564,950665..950790&lt;br&gt;,950880..951308|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcagatgccatcagtggaataaatgggactataattacttatggtcagactggagcaggaaagacatacagcatggaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtggagatatatttggaaaaagtaagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtatccatccagaatagttcagatgccttggagtgcctttctgaaggaattgccaacagagctgttggagaaacacttcaacaaggatcaacttctgatgagagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaacatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREED VIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSIL HCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIK ESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETLQQGSTSDERVRGGKIILV DLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGIDFSGENKHQQKVNRIM CLIVTLSLRAFFKMHWLVKRFSQEFLNRRVCLNATGFCRVATQERHYCAVVPPVLQMH QKHLSRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLE ELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEEVVVASSLHSPY TPSQFHCSGSNCSKHVLQLTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAI SSLLRPFGFVPD&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;1..114#472..574#711..754#994..1023#1122..1244#1323..1348#1441..1522#1644..1685#1766..1799#1931..1958#2286..2472#2530..2724#2825..2950#3040..3468#atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggtttggatactctttttcttctgccattattgtttcacagataaggcaggtatactgaatatgtaaatgaccagatgccttttctgtgagatgtgcaatttggttctagaataggactcttactcaagattactggatttgtttaatgttctcatatccatgagccattaaccttcttgagcatgtcacatagctggccctgtgtgcaaggatggaatggatagttaataaagagaggagcattcttatgtttatttagttatagatgcattctccatgctaaatccctgtgatattgttggcaagccttttgtgtttgctcatgttttgttgtttctgcaaataattttgagttaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcaggtttctttctgcctattcatcaagatagtcaaggcatctgcttattgcaatagtctctagttttgtcttgactgaattctcttatagtcatgaggtgccatgctttgtaccaactgtctaaattgcttggacgcagatgccatcagtggaataaatgggactataattacttatggtcaggtatgtattgctgcaaagtgcaaacgccttgttccctaactagacagttgtacacaaatgtttgatgcacagcttgcataagtaacttgcttattttgttgctactacattaccatcctcaaccctaaaatttacactgaacagtcaccatttgcagtgcacctaatacgctgttactatgtctgacatgagctacccatgtcaacactgacattttatttaacttttcctatgtgaagactggagcaggaaagacatacagcatggaggtaaagtgtacattgctgggattaatttaagggatgatgactgactgcatcacttcagctttgacttgtgtttttgtttaatttggatgttggcacaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtaaaaattccagcctcatgttctgaatttgaacccacatcactaaatctttactcacattgatataccacttctcaggtggagatatatttggaaaaagtaaggtcagtgttgttgagaatattttcttatgcttccgctgtacagattcatatgttggaaatagagtatcaaactttattttgtcatacctcagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtaagagagaagtgcttaaattgtgtccttacgttttgtttttcatttgatattctgaaacaagtatataattccattttatttttccttgatggcttgtgacatttcatcatctctgtaggtatccatccagaatagttcagatgccttggagtgcctttctgtaagttccttgtgtttttcttggaatgcctctctgtgattagataccaattagtttttgtttgtttctttaaattacaggaaggaattgccaacagagctgttggagaaacacgtatcctctatttactattttactgcttctagaacagctgtaaatattaacactatgcattttatcgtccttaatgtacatagaaatgaacctggctagtagtagaagtcactgcttatacattttttcagttcaacaaggatcaacttctgatgagaggtatgcttaatgaatcataaacatcagcaatcagtagttcagtgcaacattgcttcccgtatgtggataggtgttccttattccctttttcatattggttgcaactaattatatataaccttaaatttggtgatgcccattcctttgtgctatagactgatttagtgatttgatatccaaatgctggatttcttttggctcaaattgttaaaatctggttattcaaggaaaattgcagttacctgtattttaagtaaactgccatcctgaataaatgatgctagtctgagcaggacgtgtttctttttctctaaataaaactttcagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtcaccctcacgatttatgccttgctatatttacttgtcttatcttttcatcttcaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaagtttgtctactgttcgtttcggaacaaggcatatctcttgaacaatgcatgctggagtattacatttctacctctgcatattgtcctgattctatggcagcatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaaggtttgtatagcaactaaccagagatggccaattcaggtccaatttttgatcacttgatacctcactgaagatcaatcatttttcctcagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067393.2 RefSeq:Os08g0117000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0117000&diff=170038 Os08g0117000 2014-05-20T11:36:25Z <p>Jiangnanji: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Map-based cloning found PSS1 gene encoding a driver-like protein of class1.<br /> PSS1 is a new drive protein 1 family members. It has very important significance to the dynamics of rice male meiosis chromosome and male gamete formation and pollen sac cracking.<br /> <br /> ===Expression===<br /> PSS1 widely expressed in various organs, which express the most in the ear. In addition PSS1 expression was significantly raised in anther development, to the male meiosis reached its peak.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> 1. Shirong Zhou;Yang Wang;Wanchang Li;Zhigang Zhao;Yulong Ren;Yong Wang;Suhai Gu;Qibing Lin;Dan Wang;Ling Jiang;Ning Su;Xin Zhang;Linglong Liu;Zhijun Cheng;Cailin Lei;Jiulin Wang;Xiuping Guo;Fuqing Wu;Hiroshi Ikehashi;Haiyang Wang;Jianmin Wan<br /> Pollen Semi-Sterility1 Encodes a Kinesin-1–Like Protein Important for Male Meiosis, Anther Dehiscence, and Fertility in Rice<br /> The Plant Cell, 2011, 23(1): 111-129 <br /> 2. Wanchang Li;Ling Jiang;Shirong Zhou;Chunming Wang;Linglong Liu;Liangming Chen;Hiroshi Ikehashi;Jianmin Wan<br /> Fine mapping of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.)<br /> Theoretical and Applied Genetics, 2007, 114(5): 939-946<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0117000|<br /> Description = Kinesin, motor region domain containing protein|<br /> Version = NM_001067393.2 GI:297607893 GeneID:4344521|<br /> Length = 3468 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0117000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:947841..951308|<br /> CDS = 947841..947954,948312..948414,948551..948594,948834..948863,948962..949084&lt;br&gt;,949163..949188,949281..949362,949484..949525,949606..949639&lt;br&gt;,949771..949798,950126..950312,950370..950564,950665..950790&lt;br&gt;,950880..951308|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcagatgccatcagtggaataaatgggactataattacttatggtcagactggagcaggaaagacatacagcatggaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtggagatatatttggaaaaagtaagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtatccatccagaatagttcagatgccttggagtgcctttctgaaggaattgccaacagagctgttggagaaacacttcaacaaggatcaacttctgatgagagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaacatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREED VIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSIL HCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIK ESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETLQQGSTSDERVRGGKIILV DLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGIDFSGENKHQQKVNRIM CLIVTLSLRAFFKMHWLVKRFSQEFLNRRVCLNATGFCRVATQERHYCAVVPPVLQMH QKHLSRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLE ELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEEVVVASSLHSPY TPSQFHCSGSNCSKHVLQLTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAI SSLLRPFGFVPD&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;1..114#472..574#711..754#994..1023#1122..1244#1323..1348#1441..1522#1644..1685#1766..1799#1931..1958#2286..2472#2530..2724#2825..2950#3040..3468#atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggtttggatactctttttcttctgccattattgtttcacagataaggcaggtatactgaatatgtaaatgaccagatgccttttctgtgagatgtgcaatttggttctagaataggactcttactcaagattactggatttgtttaatgttctcatatccatgagccattaaccttcttgagcatgtcacatagctggccctgtgtgcaaggatggaatggatagttaataaagagaggagcattcttatgtttatttagttatagatgcattctccatgctaaatccctgtgatattgttggcaagccttttgtgtttgctcatgttttgttgtttctgcaaataattttgagttaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcaggtttctttctgcctattcatcaagatagtcaaggcatctgcttattgcaatagtctctagttttgtcttgactgaattctcttatagtcatgaggtgccatgctttgtaccaactgtctaaattgcttggacgcagatgccatcagtggaataaatgggactataattacttatggtcaggtatgtattgctgcaaagtgcaaacgccttgttccctaactagacagttgtacacaaatgtttgatgcacagcttgcataagtaacttgcttattttgttgctactacattaccatcctcaaccctaaaatttacactgaacagtcaccatttgcagtgcacctaatacgctgttactatgtctgacatgagctacccatgtcaacactgacattttatttaacttttcctatgtgaagactggagcaggaaagacatacagcatggaggtaaagtgtacattgctgggattaatttaagggatgatgactgactgcatcacttcagctttgacttgtgtttttgtttaatttggatgttggcacaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtaaaaattccagcctcatgttctgaatttgaacccacatcactaaatctttactcacattgatataccacttctcaggtggagatatatttggaaaaagtaaggtcagtgttgttgagaatattttcttatgcttccgctgtacagattcatatgttggaaatagagtatcaaactttattttgtcatacctcagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtaagagagaagtgcttaaattgtgtccttacgttttgtttttcatttgatattctgaaacaagtatataattccattttatttttccttgatggcttgtgacatttcatcatctctgtaggtatccatccagaatagttcagatgccttggagtgcctttctgtaagttccttgtgtttttcttggaatgcctctctgtgattagataccaattagtttttgtttgtttctttaaattacaggaaggaattgccaacagagctgttggagaaacacgtatcctctatttactattttactgcttctagaacagctgtaaatattaacactatgcattttatcgtccttaatgtacatagaaatgaacctggctagtagtagaagtcactgcttatacattttttcagttcaacaaggatcaacttctgatgagaggtatgcttaatgaatcataaacatcagcaatcagtagttcagtgcaacattgcttcccgtatgtggataggtgttccttattccctttttcatattggttgcaactaattatatataaccttaaatttggtgatgcccattcctttgtgctatagactgatttagtgatttgatatccaaatgctggatttcttttggctcaaattgttaaaatctggttattcaaggaaaattgcagttacctgtattttaagtaaactgccatcctgaataaatgatgctagtctgagcaggacgtgtttctttttctctaaataaaactttcagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtcaccctcacgatttatgccttgctatatttacttgtcttatcttttcatcttcaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaagtttgtctactgttcgtttcggaacaaggcatatctcttgaacaatgcatgctggagtattacatttctacctctgcatattgtcctgattctatggcagcatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaaggtttgtatagcaactaaccagagatggccaattcaggtccaatttttgatcacttgatacctcactgaagatcaatcatttttcctcagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067393.2 RefSeq:Os08g0117000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0117000&diff=170037 Os08g0117000 2014-05-20T11:34:03Z <p>Jiangnanji: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Map-based cloning found PSS1 gene encoding a driver-like protein of class1.<br /> <br /> ===Expression===<br /> PSS1 widely expressed in various organs, which express the most in the ear. In addition PSS1 expression was significantly raised in anther development, to the male meiosis reached its peak.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> 1. Shirong Zhou;Yang Wang;Wanchang Li;Zhigang Zhao;Yulong Ren;Yong Wang;Suhai Gu;Qibing Lin;Dan Wang;Ling Jiang;Ning Su;Xin Zhang;Linglong Liu;Zhijun Cheng;Cailin Lei;Jiulin Wang;Xiuping Guo;Fuqing Wu;Hiroshi Ikehashi;Haiyang Wang;Jianmin Wan<br /> Pollen Semi-Sterility1 Encodes a Kinesin-1–Like Protein Important for Male Meiosis, Anther Dehiscence, and Fertility in Rice<br /> The Plant Cell, 2011, 23(1): 111-129 <br /> 2. Wanchang Li;Ling Jiang;Shirong Zhou;Chunming Wang;Linglong Liu;Liangming Chen;Hiroshi Ikehashi;Jianmin Wan<br /> Fine mapping of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.)<br /> Theoretical and Applied Genetics, 2007, 114(5): 939-946<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0117000|<br /> Description = Kinesin, motor region domain containing protein|<br /> Version = NM_001067393.2 GI:297607893 GeneID:4344521|<br /> Length = 3468 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0117000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:947841..951308|<br /> CDS = 947841..947954,948312..948414,948551..948594,948834..948863,948962..949084&lt;br&gt;,949163..949188,949281..949362,949484..949525,949606..949639&lt;br&gt;,949771..949798,950126..950312,950370..950564,950665..950790&lt;br&gt;,950880..951308|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcagatgccatcagtggaataaatgggactataattacttatggtcagactggagcaggaaagacatacagcatggaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtggagatatatttggaaaaagtaagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtatccatccagaatagttcagatgccttggagtgcctttctgaaggaattgccaacagagctgttggagaaacacttcaacaaggatcaacttctgatgagagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaacatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREED VIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSIL HCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIK ESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETLQQGSTSDERVRGGKIILV DLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGIDFSGENKHQQKVNRIM CLIVTLSLRAFFKMHWLVKRFSQEFLNRRVCLNATGFCRVATQERHYCAVVPPVLQMH QKHLSRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLE ELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEEVVVASSLHSPY TPSQFHCSGSNCSKHVLQLTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAI SSLLRPFGFVPD&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;1..114#472..574#711..754#994..1023#1122..1244#1323..1348#1441..1522#1644..1685#1766..1799#1931..1958#2286..2472#2530..2724#2825..2950#3040..3468#atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggtttggatactctttttcttctgccattattgtttcacagataaggcaggtatactgaatatgtaaatgaccagatgccttttctgtgagatgtgcaatttggttctagaataggactcttactcaagattactggatttgtttaatgttctcatatccatgagccattaaccttcttgagcatgtcacatagctggccctgtgtgcaaggatggaatggatagttaataaagagaggagcattcttatgtttatttagttatagatgcattctccatgctaaatccctgtgatattgttggcaagccttttgtgtttgctcatgttttgttgtttctgcaaataattttgagttaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcaggtttctttctgcctattcatcaagatagtcaaggcatctgcttattgcaatagtctctagttttgtcttgactgaattctcttatagtcatgaggtgccatgctttgtaccaactgtctaaattgcttggacgcagatgccatcagtggaataaatgggactataattacttatggtcaggtatgtattgctgcaaagtgcaaacgccttgttccctaactagacagttgtacacaaatgtttgatgcacagcttgcataagtaacttgcttattttgttgctactacattaccatcctcaaccctaaaatttacactgaacagtcaccatttgcagtgcacctaatacgctgttactatgtctgacatgagctacccatgtcaacactgacattttatttaacttttcctatgtgaagactggagcaggaaagacatacagcatggaggtaaagtgtacattgctgggattaatttaagggatgatgactgactgcatcacttcagctttgacttgtgtttttgtttaatttggatgttggcacaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtaaaaattccagcctcatgttctgaatttgaacccacatcactaaatctttactcacattgatataccacttctcaggtggagatatatttggaaaaagtaaggtcagtgttgttgagaatattttcttatgcttccgctgtacagattcatatgttggaaatagagtatcaaactttattttgtcatacctcagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtaagagagaagtgcttaaattgtgtccttacgttttgtttttcatttgatattctgaaacaagtatataattccattttatttttccttgatggcttgtgacatttcatcatctctgtaggtatccatccagaatagttcagatgccttggagtgcctttctgtaagttccttgtgtttttcttggaatgcctctctgtgattagataccaattagtttttgtttgtttctttaaattacaggaaggaattgccaacagagctgttggagaaacacgtatcctctatttactattttactgcttctagaacagctgtaaatattaacactatgcattttatcgtccttaatgtacatagaaatgaacctggctagtagtagaagtcactgcttatacattttttcagttcaacaaggatcaacttctgatgagaggtatgcttaatgaatcataaacatcagcaatcagtagttcagtgcaacattgcttcccgtatgtggataggtgttccttattccctttttcatattggttgcaactaattatatataaccttaaatttggtgatgcccattcctttgtgctatagactgatttagtgatttgatatccaaatgctggatttcttttggctcaaattgttaaaatctggttattcaaggaaaattgcagttacctgtattttaagtaaactgccatcctgaataaatgatgctagtctgagcaggacgtgtttctttttctctaaataaaactttcagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtcaccctcacgatttatgccttgctatatttacttgtcttatcttttcatcttcaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaagtttgtctactgttcgtttcggaacaaggcatatctcttgaacaatgcatgctggagtattacatttctacctctgcatattgtcctgattctatggcagcatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaaggtttgtatagcaactaaccagagatggccaattcaggtccaatttttgatcacttgatacctcactgaagatcaatcatttttcctcagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067393.2 RefSeq:Os08g0117000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0117000&diff=170034 Os08g0117000 2014-05-20T11:32:35Z <p>Jiangnanji: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Map-based cloning found PSS1 gene encoding a driver-like protein of class1.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> 1. Shirong Zhou;Yang Wang;Wanchang Li;Zhigang Zhao;Yulong Ren;Yong Wang;Suhai Gu;Qibing Lin;Dan Wang;Ling Jiang;Ning Su;Xin Zhang;Linglong Liu;Zhijun Cheng;Cailin Lei;Jiulin Wang;Xiuping Guo;Fuqing Wu;Hiroshi Ikehashi;Haiyang Wang;Jianmin Wan<br /> Pollen Semi-Sterility1 Encodes a Kinesin-1–Like Protein Important for Male Meiosis, Anther Dehiscence, and Fertility in Rice<br /> The Plant Cell, 2011, 23(1): 111-129 <br /> 2. Wanchang Li;Ling Jiang;Shirong Zhou;Chunming Wang;Linglong Liu;Liangming Chen;Hiroshi Ikehashi;Jianmin Wan<br /> Fine mapping of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.)<br /> Theoretical and Applied Genetics, 2007, 114(5): 939-946<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0117000|<br /> Description = Kinesin, motor region domain containing protein|<br /> Version = NM_001067393.2 GI:297607893 GeneID:4344521|<br /> Length = 3468 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0117000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:947841..951308|<br /> CDS = 947841..947954,948312..948414,948551..948594,948834..948863,948962..949084&lt;br&gt;,949163..949188,949281..949362,949484..949525,949606..949639&lt;br&gt;,949771..949798,950126..950312,950370..950564,950665..950790&lt;br&gt;,950880..951308|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcagatgccatcagtggaataaatgggactataattacttatggtcagactggagcaggaaagacatacagcatggaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtggagatatatttggaaaaagtaagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtatccatccagaatagttcagatgccttggagtgcctttctgaaggaattgccaacagagctgttggagaaacacttcaacaaggatcaacttctgatgagagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaacatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREED VIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSIL HCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIK ESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETLQQGSTSDERVRGGKIILV DLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGIDFSGENKHQQKVNRIM CLIVTLSLRAFFKMHWLVKRFSQEFLNRRVCLNATGFCRVATQERHYCAVVPPVLQMH QKHLSRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLE ELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEEVVVASSLHSPY TPSQFHCSGSNCSKHVLQLTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAI SSLLRPFGFVPD&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;1..114#472..574#711..754#994..1023#1122..1244#1323..1348#1441..1522#1644..1685#1766..1799#1931..1958#2286..2472#2530..2724#2825..2950#3040..3468#atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggtttggatactctttttcttctgccattattgtttcacagataaggcaggtatactgaatatgtaaatgaccagatgccttttctgtgagatgtgcaatttggttctagaataggactcttactcaagattactggatttgtttaatgttctcatatccatgagccattaaccttcttgagcatgtcacatagctggccctgtgtgcaaggatggaatggatagttaataaagagaggagcattcttatgtttatttagttatagatgcattctccatgctaaatccctgtgatattgttggcaagccttttgtgtttgctcatgttttgttgtttctgcaaataattttgagttaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcaggtttctttctgcctattcatcaagatagtcaaggcatctgcttattgcaatagtctctagttttgtcttgactgaattctcttatagtcatgaggtgccatgctttgtaccaactgtctaaattgcttggacgcagatgccatcagtggaataaatgggactataattacttatggtcaggtatgtattgctgcaaagtgcaaacgccttgttccctaactagacagttgtacacaaatgtttgatgcacagcttgcataagtaacttgcttattttgttgctactacattaccatcctcaaccctaaaatttacactgaacagtcaccatttgcagtgcacctaatacgctgttactatgtctgacatgagctacccatgtcaacactgacattttatttaacttttcctatgtgaagactggagcaggaaagacatacagcatggaggtaaagtgtacattgctgggattaatttaagggatgatgactgactgcatcacttcagctttgacttgtgtttttgtttaatttggatgttggcacaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtaaaaattccagcctcatgttctgaatttgaacccacatcactaaatctttactcacattgatataccacttctcaggtggagatatatttggaaaaagtaaggtcagtgttgttgagaatattttcttatgcttccgctgtacagattcatatgttggaaatagagtatcaaactttattttgtcatacctcagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtaagagagaagtgcttaaattgtgtccttacgttttgtttttcatttgatattctgaaacaagtatataattccattttatttttccttgatggcttgtgacatttcatcatctctgtaggtatccatccagaatagttcagatgccttggagtgcctttctgtaagttccttgtgtttttcttggaatgcctctctgtgattagataccaattagtttttgtttgtttctttaaattacaggaaggaattgccaacagagctgttggagaaacacgtatcctctatttactattttactgcttctagaacagctgtaaatattaacactatgcattttatcgtccttaatgtacatagaaatgaacctggctagtagtagaagtcactgcttatacattttttcagttcaacaaggatcaacttctgatgagaggtatgcttaatgaatcataaacatcagcaatcagtagttcagtgcaacattgcttcccgtatgtggataggtgttccttattccctttttcatattggttgcaactaattatatataaccttaaatttggtgatgcccattcctttgtgctatagactgatttagtgatttgatatccaaatgctggatttcttttggctcaaattgttaaaatctggttattcaaggaaaattgcagttacctgtattttaagtaaactgccatcctgaataaatgatgctagtctgagcaggacgtgtttctttttctctaaataaaactttcagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtcaccctcacgatttatgccttgctatatttacttgtcttatcttttcatcttcaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaagtttgtctactgttcgtttcggaacaaggcatatctcttgaacaatgcatgctggagtattacatttctacctctgcatattgtcctgattctatggcagcatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaaggtttgtatagcaactaaccagagatggccaattcaggtccaatttttgatcacttgatacctcactgaagatcaatcatttttcctcagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067393.2 RefSeq:Os08g0117000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0117000&diff=170031 Os08g0117000 2014-05-20T11:27:53Z <p>Jiangnanji: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> 1. Shirong Zhou;Yang Wang;Wanchang Li;Zhigang Zhao;Yulong Ren;Yong Wang;Suhai Gu;Qibing Lin;Dan Wang;Ling Jiang;Ning Su;Xin Zhang;Linglong Liu;Zhijun Cheng;Cailin Lei;Jiulin Wang;Xiuping Guo;Fuqing Wu;Hiroshi Ikehashi;Haiyang Wang;Jianmin Wan<br /> Pollen Semi-Sterility1 Encodes a Kinesin-1–Like Protein Important for Male Meiosis, Anther Dehiscence, and Fertility in Rice<br /> The Plant Cell, 2011, 23(1): 111-129 <br /> 2. Wanchang Li;Ling Jiang;Shirong Zhou;Chunming Wang;Linglong Liu;Liangming Chen;Hiroshi Ikehashi;Jianmin Wan<br /> Fine mapping of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.)<br /> Theoretical and Applied Genetics, 2007, 114(5): 939-946<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os08g0117000|<br /> Description = Kinesin, motor region domain containing protein|<br /> Version = NM_001067393.2 GI:297607893 GeneID:4344521|<br /> Length = 3468 bp|<br /> Definition = Oryza sativa Japonica Group Os08g0117000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|<br /> AP = Chromosome 8:947841..951308|<br /> CDS = 947841..947954,948312..948414,948551..948594,948834..948863,948962..949084&lt;br&gt;,949163..949188,949281..949362,949484..949525,949606..949639&lt;br&gt;,949771..949798,950126..950312,950370..950564,950665..950790&lt;br&gt;,950880..951308|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008401:947841..951308<br /> source=RiceChromosome08<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcagatgccatcagtggaataaatgggactataattacttatggtcagactggagcaggaaagacatacagcatggaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtggagatatatttggaaaaagtaagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtatccatccagaatagttcagatgccttggagtgcctttctgaaggaattgccaacagagctgttggagaaacacttcaacaaggatcaacttctgatgagagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaacatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREED VIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSIL HCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIK ESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETLQQGSTSDERVRGGKIILV DLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGIDFSGENKHQQKVNRIM CLIVTLSLRAFFKMHWLVKRFSQEFLNRRVCLNATGFCRVATQERHYCAVVPPVLQMH QKHLSRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLE ELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEEVVVASSLHSPY TPSQFHCSGSNCSKHVLQLTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAI SSLLRPFGFVPD&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;1..114#472..574#711..754#994..1023#1122..1244#1323..1348#1441..1522#1644..1685#1766..1799#1931..1958#2286..2472#2530..2724#2825..2950#3040..3468#atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggtttggatactctttttcttctgccattattgtttcacagataaggcaggtatactgaatatgtaaatgaccagatgccttttctgtgagatgtgcaatttggttctagaataggactcttactcaagattactggatttgtttaatgttctcatatccatgagccattaaccttcttgagcatgtcacatagctggccctgtgtgcaaggatggaatggatagttaataaagagaggagcattcttatgtttatttagttatagatgcattctccatgctaaatccctgtgatattgttggcaagccttttgtgtttgctcatgttttgttgtttctgcaaataattttgagttaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcaggtttctttctgcctattcatcaagatagtcaaggcatctgcttattgcaatagtctctagttttgtcttgactgaattctcttatagtcatgaggtgccatgctttgtaccaactgtctaaattgcttggacgcagatgccatcagtggaataaatgggactataattacttatggtcaggtatgtattgctgcaaagtgcaaacgccttgttccctaactagacagttgtacacaaatgtttgatgcacagcttgcataagtaacttgcttattttgttgctactacattaccatcctcaaccctaaaatttacactgaacagtcaccatttgcagtgcacctaatacgctgttactatgtctgacatgagctacccatgtcaacactgacattttatttaacttttcctatgtgaagactggagcaggaaagacatacagcatggaggtaaagtgtacattgctgggattaatttaagggatgatgactgactgcatcacttcagctttgacttgtgtttttgtttaatttggatgttggcacaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtaaaaattccagcctcatgttctgaatttgaacccacatcactaaatctttactcacattgatataccacttctcaggtggagatatatttggaaaaagtaaggtcagtgttgttgagaatattttcttatgcttccgctgtacagattcatatgttggaaatagagtatcaaactttattttgtcatacctcagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtaagagagaagtgcttaaattgtgtccttacgttttgtttttcatttgatattctgaaacaagtatataattccattttatttttccttgatggcttgtgacatttcatcatctctgtaggtatccatccagaatagttcagatgccttggagtgcctttctgtaagttccttgtgtttttcttggaatgcctctctgtgattagataccaattagtttttgtttgtttctttaaattacaggaaggaattgccaacagagctgttggagaaacacgtatcctctatttactattttactgcttctagaacagctgtaaatattaacactatgcattttatcgtccttaatgtacatagaaatgaacctggctagtagtagaagtcactgcttatacattttttcagttcaacaaggatcaacttctgatgagaggtatgcttaatgaatcataaacatcagcaatcagtagttcagtgcaacattgcttcccgtatgtggataggtgttccttattccctttttcatattggttgcaactaattatatataaccttaaatttggtgatgcccattcctttgtgctatagactgatttagtgatttgatatccaaatgctggatttcttttggctcaaattgttaaaatctggttattcaaggaaaattgcagttacctgtattttaagtaaactgccatcctgaataaatgatgctagtctgagcaggacgtgtttctttttctctaaataaaactttcagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtcaccctcacgatttatgccttgctatatttacttgtcttatcttttcatcttcaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaagtttgtctactgttcgtttcggaacaaggcatatctcttgaacaatgcatgctggagtattacatttctacctctgcatattgtcctgattctatggcagcatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaaggtttgtatagcaactaaccagagatggccaattcaggtccaatttttgatcacttgatacctcactgaagatcaatcatttttcctcagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067393.2 RefSeq:Os08g0117000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 8]]<br /> [[Category:Chromosome 8]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0330100&diff=169912 Os06g0330100 2014-05-20T02:51:57Z <p>Jiangnanji: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> 1. Jie Chen;Yongfeng Shi;Wenzheng Liu;Rongyao Chai;Yaping Fu;Jieyun Zhuang;Jianli Wu<br /> A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae<br /> Journal of genetics and genomics, 2011, 38(5): 209-216 <br /> 2. Junjun Shang;Yong Tao;Xuewei Chen;Yan Zou;Cailin Lei;Jing Wang;Xiaobing Li;Xianfeng Zhao;Meijun Zhang;Zhike Lu;Jichen Xu;Zhukuan Cheng;Jianmin Wan;Lihuang Zhu<br /> Identification of a New Rice Blast Resistance Gene, Pid3, by Genomewide Comparison of Paired Nucleotide-Binding Site–Leucine-Rich Repeat Genes and Their Pseudogene Alleles Between the Two Sequenced Rice Genomes<br /> Genetics, 2009, 182(4): 1303-1311 <br /> 3. J.-L. Wu;Y.-Y. Fan;D.-B. Li;K.-L. Zheng;H. Leung and J.-Y. Zhuang<br /> Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates<br /> Theoretical and Applied Genetics, 2005, 111(1): 50-56 <br /> 4. 吴建利; 柴荣耀; 樊叶杨; 李德葆; 郑康乐; Hei LEUNG; 庄杰云<br /> 抗稻瘟病水稻材料谷梅2号中主效抗稻瘟病基因的成簇分布<br /> 中国水稻科学, 2004, 18(6): 567-569 <br /> 5. Jie-Yun Zhuang;Wen-Bin Ma;Jian-Li Wu;Rong-Yao Chai;Jun Lu;Ye-Yang Fan;Min-Zhong Jin;Hei Leung &amp; Kang-Le Zheng<br /> Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and RFLP in rice<br /> Euphytica, 2002, 128(3): 363-370 <br /> 6. Zhuang-J-Y, Wu-J-L, Fan-Y-Y, Rao-Z-M, Zheng-K-L<br /> Genetic drag between a blast resistance gene and QTL conditioning yield trait detected in a recombinant inbred line population in rice<br /> Rice Genetics Newsletters, 2001, 18(0): 69-70 <br /> 7. 吴建利; 庄杰云; 柴荣耀; 樊叶杨; 金敏忠; 李德葆; 郑康乐<br /> 水稻抗穗瘟基因的分子定位<br /> 植物病理学报, 2000, 30(2): 111-115 <br /> 8. Wu-J-L, Zhuang-J-Y, Fan-Y-Y, Li-D-B, Leung-H, Zheng-K-L<br /> Effectiveness of a resistance gene from Gumei 2 against leaf and neck blast under field conditions in China<br /> Rice Genetics Newsletters, 1999, 16(0): 90-92 <br /> 9. Zhuang-J-Y;Wu-J-L;Chai-R-Y;Fan-Y-Y;Jin-M-Z;Leung-H;Zheng-K-L<br /> Rapid identification of resistance gene analogs linked to two blast resistance genes in rice<br /> Rice Genetics Newsletters, 1998, 15(): 125-127 <br /> 10. Zhuang-J Y, Chai-R Y, Ma-W, B Lu-J, Jin-M Z, Zheng-K-L<br /> Genetic analysis of the blast resistance at vegetative and reproductive stages in rice<br /> Rice Genetics Newsletters, 1997, 14(0): 62-64<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0330100|<br /> Description = Disease resistance protein family protein|<br /> Version = NM_001064074.2 GI:297605748 GeneID:4340920|<br /> Length = 2775 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0330100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:13123254..13126028|<br /> CDS = 13123254..13123817,13123893..13126028|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:13123254..13126028<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIR EVKGELESIHAFLQAAERFKDADETTSAFVKQVRSLALSIEDVVDEFTYELGEGDGRM GMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKSMAGRRSSN WRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSVWGMSGIGKTALVANVYNA IKADFDTCAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSY LENKRYVLVLDDVWNANVWFDSKDAFEDGNIGRIILTSRNYDVALLAHETHIINLQPL EKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLPIAIVCIGRLLSFQGSTY SDWEKVYKNLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKS LVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEVQMHDILRV LALSKAHEQNFCIVVNHSRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPN VSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGLFNLRFLGLRRTKISKLPSSIGRLK ILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPLRICSMTT LQTLLLMEASSQMVHHLGSLVELRTFRISKADSSQEVLHLESLKPPPLLQKLFLQGTL SHESLPHFVSVSNLNNLTFLRLAGSRIDENAFLNLEGLQQLVKLQLYDAYDGMNIYFH ENSFPKLRILKIWGAPHLNEIKMTKGAVASLTDLKFLLCPNLKQLPCGIEHVRTLEEL TLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2212..2775#1..2136#atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggtgcgaagttgccattgtgagcagttgttcatggccatcactaatatgattcatcttacccgtcttgggatctaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064074.2 RefSeq:Os06g0330100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=169902 Os04g0615000 2014-05-20T02:28:30Z <p>Jiangnanji: /* References */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> <br /> ===Expression===<br /> nal-1 localized in chromosome 4, the length of its cDNA is 2168 bp. It contains five exons and encoding a protein with 582 amino acid.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> 1. Mingliang Chen;Ju Luo;Gaoneng Shao;Xiangjin Wei;Shaoqing Tang;Zhonghua Sheng;Jian Song;Peisong Hu<br /> Fine mapping of a major QTL for flag leaf width in rice, qFLW4, which might be caused by alternative splicing of NAL1<br /> Plant Cell Reports, 2011, 31(5): 863-872 <br /> 2. Jing Qi;Qian Qian;Qingyun Bu;Shuyu Li;Qian Chen;Jiaqiang Sun;Wenxing Liang;Yihua Zhou;Chengcai Chu;Xugang Li;Fugang Ren;Klaus Palme;Bingran Zhao;Jinfeng Chen;Mingsheng Chen;Chuanyou Li<br /> Mutation of the Rice Narrow leaf1 Gene, Which Encodes a Novel Protein, Affects Vein Patterning and Polar Auxin Transport<br /> Plant Physiology, 2008, 147(4): 1947-1959<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=169901 Os04g0615000 2014-05-20T02:23:14Z <p>Jiangnanji: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> <br /> ===Expression===<br /> nal-1 localized in chromosome 4, the length of its cDNA is 2168 bp. It contains five exons and encoding a protein with 582 amino acid.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=169900 Os04g0615000 2014-05-20T02:22:51Z <p>Jiangnanji: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> <br /> ===Expression===<br /> nal-1 localized in chromosome 4, the length of cDNA is 2168 bp. It contains five exons and encoding a protein with 582 amino acid.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=169700 Os04g0615000 2014-05-19T09:16:29Z <p>Jiangnanji: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Nal1 affects rice auxin polar transportation and plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0615000&diff=169696 Os04g0615000 2014-05-19T09:14:55Z <p>Jiangnanji: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> Nal1 affected rice auxin polar transportation. IT plays an important role in the lateral growth of blade <br /> because of adjusting arrangement mode of the tube bundle. Besides, Nal1 influence rice internodes cell division.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os04g0615000|<br /> Description = Hypothetical protein|<br /> Version = NM_001060401.1 GI:115460531 GeneID:4336986|<br /> Length = 2575 bp|<br /> Definition = Oryza sativa Japonica Group Os04g0615000, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|<br /> AP = Chromosome 4:31610701..31613275|<br /> CDS = 31611375..31611492,31611830..31612335|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008397:31610701..31613275<br /> source=RiceChromosome04<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVR ADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTT GTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGII WGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQG&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;675..792#1130..1635#caagattcatcgcaagatttgctagtacaaagtggataaattttcatggcactctgaagattatgccaaaaactgaccgttggtttgttggttagtcctaacatctaagtttgaccagttgagcggtggccacagctagtttgaatgctaccaatgttcattacatcaaagcagatgatctgatcggagattggaaggagtttctccttctaaatcatatcatatcatttgagatactgcatactatatgttggttcttgtgcagattaaagcttctggattttacacaatcctcctaccgtttaccagtcaaacctttaacatgttgctgtgctctttttgtgaaatttcaacttagtaataatattttgtgacatgcactcaaactacatactccctccatcccaaaaaaatccaacctaggataggacaacaaatctggacaaacactttgtccagatttgctgtgacctatcctaggttgttcttttttgggacggatggagtacttctgaagcgttcgtccttatagttctgtttcattgtttcaggttgcaagccatgaaacttttggtactttgggtgcaattgtgaaacggcgcactggcaacaagcaggttggtttcctcactaaccatcatgtcgcggttgacttggactaccctaatcagaagatgtttcatccattaccacccaatcttgggcctggcgtttatcttggagctgttgaaagagcaacttctttcatcacagatgacgtttggtatggaatctatgctggaacaaacccaggtagagcagttacaaattagctggtcagggctttatctacaattgtttgtctatttaaaaacaatgtcttaagtaacattaaaagacacttcaactcactgtataaatataaaaaataagtttcctgcttcctagttcccatcattcatattaatgccggattgcattttttactagttagaaacaaatcaacatttagttttgattgtaaaaaaaacatactatgtttgtgcttttctggtcatttaacacatttaccattttattgattattccaaatgatgtatataccagtctaattcccaaacatatatgccgccccattatggatttgcagagacatttgtacgagctgacggtgcatttatcccatttgctgatgactttgacatttccaccgtcacgactgtagttaggggagtcggtgacattggggatgtcaaggttatagatctgcagtgtccgctcaatagcctcatagggaggcaagtatgcaaagttggcagaagctctggtcacacaactgggactgtgatggcctatgcccttgagtacaatgacgagaaaggaatatgcttcttcacagacatccttgttgttggtgagaaccgccaaacatttgatttggaaggtgatagcggaagccttattatcctgactagccaagatggtgagaagccgcgtccaattggaattatatggggtggcacagcaaatcgtgggaggttgaagcttacaagtgatcatggccctgaaaactggactagtggggttgatcttggccgtctactcgaccgtctggaacttgatattatcattaccaatgaatcactccaaggttgattcttttccctctattcatttgcattcatcttcagatattccagaaatacgttggactatccaatttacttgatgttttcatactactttgtattgaatctgtacacttttgctccattacaaagctgacagaatttgcctactataaagatgccgtgcagcagcaaagatttgctttggtggccgccgttacctcagctgttggggagtcttccggggtgcctgtcgccatcccggaagagaagatcgaagagatcttcgagccattggggatccaaatccagcaactgcctcgccatgacgtggcggcctctggaactgaaggggaggaggcatccaacacggtggtcaatgtggaagagcaccagttcatctcaaacttcgtcggtatgtcgcccgtgcgcgacgaccaagacgctccgaggagcatcaccaacctgaacaacccctccgaggaagaactcgccatgtcgctccatctgggtgaccgagagcccaagcggctccgttcggactccggatcaagccttgacctggagaaatgaagtgcaaaaagtgctggttctgaatttctgattctggttcttcagagtttattgtcattgtggacagccaaaagtagtagtagatcaaaagacctcatatgcagttcagaaaaattgaacctgcagtaagcttcggtgagcttgaatggctttggcaagcatatcatgtaacatgatgtattattattactacaattgattcagccccttgtaggatgttaggtgctagtcctgcagttttgctgtgctcatgatcgtgagacctgatatacaccattgccggatcccttcctctttgtagaagaagaagaacaatgtgcagggaattatgataatgatgatctttgatctatttccccctattattatttaccaattatcaggtttcaattatc&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060401.1 RefSeq:Os04g0615000]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 4]]<br /> [[Category:Chromosome 4]]</div> Jiangnanji