RiceWiki - User contributions [en]

Os02g0535400

2014-06-10T10:30:51Z

Nengpan Zhang: /* Expression */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1([http://www.ncbi.nlm.nih.gov/gene/?term=AK111881 NCBI Gene ID: 4329567]) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 (for required for ''Mla12'' resistance) is an important component of ''R'' gene–mediated disease resistance, which contains two zinc binding finger motifs termed CHORD-I and
CHORD-II (Cys- and His-rich domains). In plants, RAR1 interacts directly with SGT1 (for suppressor of the G2 allele of ''skp1'') and HSP90. The CHORD-I domain of RAR1 interacts directly with the N terminus of HSP90, and SGT1 binds the CHORD-II domain of RAR1. SGT1 is required for disease resistance mediated by diverse R proteins and is also required for the function of an SCF (for Skp1/Cullin/F-box protein). RAR1, SGT1, and HSP90 were shown to play an important role in regulating the stability of R proteins that contain the NBS-LRR domain<ref name = "ref 1"/>.
RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1. Interestingly, Os RAR1is not required by the three examined riceRgenes for blast resistance. Recently, it was shown that OsRAR1is not required for Pish-mediated blast resistance<ref name = "ref 2"/>. RAR1 is critical for Os Rac1–mediated enhancement of PAMP signaling. Therefore, RAR1 activity in rice innate immunity may be on a broader scale than in those other species.

===Expression===
PCR reactions were performed with specific primer sets: Os ''RAR1''(5'-TGCAAAACTGGAAAGCACAC-3' and 5'-GGAACTGCAGGCTTCTCAAC-3')<ref name = "ref 1"/>.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name = "ref 1"> Thao NP, Chen L, Nakashima A, Hara S, Umemura K, Takahashi A, Shirasu K, Kawasaki T, Shimamoto K.RAR1 and HSP90 form a complex with Rac/Rop GTPase and function in innate-immune responses in rice.Plant Cell. 2007 Dec;19(12):4035-45.</ref>
<ref name = "ref 2">
Takahashi, A., Agrawal, G.K., Yamazaki, M., Onosato, K., Miyao, A., Kawasaki, T., Shimamoto, K., and Hirochika, H. (2007). Rice Pti1a negatively regulates RAR1-dependent defense responses. Plant Cell 9: 2940–2951.</ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T10:27:35Z

Nengpan Zhang: /* Function */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1([http://www.ncbi.nlm.nih.gov/gene/?term=AK111881 NCBI Gene ID: 4329567]) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 (for required for ''Mla12'' resistance) is an important component of ''R'' gene–mediated disease resistance, which contains two zinc binding finger motifs termed CHORD-I and
CHORD-II (Cys- and His-rich domains). In plants, RAR1 interacts directly with SGT1 (for suppressor of the G2 allele of ''skp1'') and HSP90. The CHORD-I domain of RAR1 interacts directly with the N terminus of HSP90, and SGT1 binds the CHORD-II domain of RAR1. SGT1 is required for disease resistance mediated by diverse R proteins and is also required for the function of an SCF (for Skp1/Cullin/F-box protein). RAR1, SGT1, and HSP90 were shown to play an important role in regulating the stability of R proteins that contain the NBS-LRR domain<ref name = "ref 1"/>.
RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1. Interestingly, Os RAR1is not required by the three examined riceRgenes for blast resistance. Recently, it was shown that OsRAR1is not required for Pish-mediated blast resistance<ref name = "ref 2"/>. RAR1 is critical for Os Rac1–mediated enhancement of PAMP signaling. Therefore, RAR1 activity in rice innate immunity may be on a broader scale than in those other species.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name = "ref 1"> Thao NP, Chen L, Nakashima A, Hara S, Umemura K, Takahashi A, Shirasu K, Kawasaki T, Shimamoto K.RAR1 and HSP90 form a complex with Rac/Rop GTPase and function in innate-immune responses in rice.Plant Cell. 2007 Dec;19(12):4035-45.</ref>
<ref name = "ref 2">
Takahashi, A., Agrawal, G.K., Yamazaki, M., Onosato, K., Miyao, A., Kawasaki, T., Shimamoto, K., and Hirochika, H. (2007). Rice Pti1a negatively regulates RAR1-dependent defense responses. Plant Cell 9: 2940–2951.</ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T10:18:21Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1([http://www.ncbi.nlm.nih.gov/gene/?term=AK111881 NCBI Gene ID: 4329567]) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1. Interestingly, Os RAR1is not required by the three examined riceRgenes for blast resistance. Recently, it was shown that OsRAR1is not required for Pish-mediated blast resistance<ref name = "ref 2"/>. RAR1 is critical for Os Rac1–mediated enhancement of PAMP signaling. Therefore, RAR1 activity in rice innate immunity may be on a broader scale than in those other species.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name = "ref 1"> Thao NP, Chen L, Nakashima A, Hara S, Umemura K, Takahashi A, Shirasu K, Kawasaki T, Shimamoto K.RAR1 and HSP90 form a complex with Rac/Rop GTPase and function in innate-immune responses in rice.Plant Cell. 2007 Dec;19(12):4035-45.</ref>
<ref name = "ref 2">
Takahashi, A., Agrawal, G.K., Yamazaki, M., Onosato, K., Miyao, A., Kawasaki, T., Shimamoto, K., and Hirochika, H. (2007). Rice Pti1a negatively regulates RAR1-dependent defense responses. Plant Cell 9: 2940–2951.</ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T10:16:58Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1([http://www.ncbi.nlm.nih.gov/gene/?term=AK111881 NCBI Gene ID: 4329567]) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1. Interestingly, Os RAR1is not required by the three examined riceRgenes for blast resistance. Recently, it was shown that OsRAR1is not required for Pish-mediated blast resistance<ref name = "ref 2"/>. RAR1 is critical for Os Rac1–mediated enhancement of PAMP signaling. Therefore, RAR1 activity in rice innate immunity may be on a broader scale than in those other species.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name = "ref 1"> Thao NP, Chen L, Nakashima A, Hara S, Umemura K, Takahashi A, Shirasu K, Kawasaki T, Shimamoto K.RAR1 and HSP90 form a complex with Rac/Rop GTPase and function in innate-immune responses in rice.Plant Cell. 2007 Dec;19(12):4035-45.
<ref name = "ref 2">
Takahashi, A., Agrawal, G.K., Yamazaki, M., Onosato, K., Miyao, A., Kawasaki, T., Shimamoto, K., and Hirochika, H. (2007). Rice Pti1a negatively regulates RAR1-dependent defense responses. Plant Cell 9: 2940–2951.
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T10:06:44Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1([http://www.ncbi.nlm.nih.gov/gene/?term=AK111881 NCBI Gene ID: 4329567]) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1. Interestingly, Os RAR1is not required by the three examined riceRgenes for blast resistance. Recently, it was shown that OsRAR1is not required for Pish-mediated blast resistance<ref name = "ref 2"/>. RAR1 is critical for Os Rac1–mediated enhancement of PAMP signaling. Therefore, RAR1 activity in rice innate immunity may be on a broader scale than in those other species.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
Please input cited references here.

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T09:59:58Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1([http://www.ncbi.nlm.nih.gov/gene/?term=AK111881 NCBI Gene ID: 4329567]) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
Please input cited references here.

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T09:58:58Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1(NCBI Gene ID: 4329567) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
Please input cited references here.

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os02g0535400

2014-06-10T09:58:10Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
The gene locus Os02g0535400 is a gene called Os RAR1(NCBI Gene ID: 4329567) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( [http://http://www.ncbi.nlm.nih.gov/protein/Q6EPW7.2 NCBI ACCESSION:Q6EPW7])<ref name = "ref 1"/>. RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
Please input cited references here.

==Structured Information==
{{JaponicaGene|
GeneName = Os02g0535400|
Description = Conserved hypothetical protein|
Version = NM_001053574.1 GI:115446518 GeneID:4329567|
Length = 2767 bp|
Definition = Oryza sativa Japonica Group Os02g0535400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20584982..20587748|
CDS = 20586274..20586295,20587512..20587747|
GCID = <gbrowseImage1>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20584982..20587748
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>|
AA = <aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>|
DNA = <dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053574.1 RefSeq:Os02g0535400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

Os03g0760200

2014-06-04T14:19:06Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===

----

This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===

----

[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
[[File:FigureOs03g0760200_2.jpg|right|thumb|200px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===

----

BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
----

Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l(Figure 2). The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
<ref name="ref2"> Cabello-Hurtado F, Batard Y, Salaun JP, Durst F, Pinot F, Werck-Reichart D (1998) Cloning, expression in yeast, and functional characterization of CYP81B1, a plant cytochrome P450 that catalyzes in-chain hydroxylation of fatty acids. J Biol Chem 273:7260–7267. </ref>
<ref name="ref3"> Yamada T, Kambara Y, Imaishi H, Ohkawa H (2000) Molecular cloning of a novel cytochrome P450 species induced by chemical treatments in tobacco cells. Pestic Biochem Physiol 68:11–25. </ref>
<ref name="ref4"> Akashi T, Aoki T, Ayabe S (1998) CYP81E1, a cytochrome P450 cDNA of licorice (Glycyrrhiza echinata L.), encodes isoflavone 2′-hydroxylase. Biochem Biophys Res Commun 251:67–70. </ref>
<ref name="ref5"> Liu C, Huhman D, Sumner L-W, Dixon RA (2003) Regiospecific hydroxylation of isoflavones by cytochrome P450 81E enzymes from Medicago truncatula. Plant J 36:471–484. </ref>
<ref name="ref6"> Zhang J, Wu X (1999) Screening and preliminary study on the chemical lethal mutant in rice photoperiod-temperature sensitive male sterile line. Chinese J Rice Sci 13:65–68. </ref>
<ref name="ref7">Mori K (1984) Inheritance of susceptible mutant in rice plant to herbicide bentazon. Jpn J Breed 34:421–422. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T14:09:58Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===

----

This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===

----

[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
[[File:FigureOs03g0760200_2.jpg|right|thumb|200px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===

----

BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
----

Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l(Figure 2). The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T14:09:21Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===

----

This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===

----

[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
[[File:FigureOs03g0760200_2.jpg|right|thumb|150px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===

----

BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
----

Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l(Figure 2). The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T14:07:03Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
[[File:FigureOs03g0760200_2.jpg|right|thumb|100px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l(Figure 2). The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T14:06:32Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
[[File:FigureOs03g0760200_2.jpg|right|thumb|300px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l(Figure 2). The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

File:FigureOs03g0760200 2.jpg

2014-06-04T14:04:50Z

Nengpan Zhang: Bentazon-sensitivity and allelism test of two mutants. (A)Response of mutants 8077S and Norin8m to different concentrations of bentazon. The plants in the front are Norin8m and those in back row are 8077S. Rice plants are individually treated with 300 mg/

Bentazon-sensitivity and allelism test of two mutants. (A)Response of mutants 8077S and Norin8m to different concentrations of bentazon. The plants in the front are Norin8m and those in back row are 8077S. Rice plants are individually treated with 300 mg/l (A), 200 mg/l (B), 100 mg/l (C), 50 mg/l (D) of bentazon, and water (E) at the maximum tillering stage. (B)Healthy plants of Norin8m (left), F1 hybrid (middle), and 8077S(right) used for allelism test. (C) Norin8m (left), 8077S (right), and their F1 hybrid (middle) plants all died after treating with 1250 mg/l bentazon. Only one plant for each type was shown.

Os03g0760200

2014-06-04T14:00:50Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l(Figure 2). The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T13:58:08Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7"/> nearly over the entire region.
===Mutaion===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l. The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T13:57:12Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
BLAST searches revealed that the deduced amino acid sequence of CYP81A6 was highly similar to that of the previously reported chortoluron hydroxylase CYP81B1 from Helianthus tuberrosus(45% identity and 63% similarity)<ref name = "ref4"/> and CYP81B2 from Nicotiana tabacum(44% identity and 59% similarity) <ref name = "ref5"/> and isoflavone hydroxylase CYP81E1 from Glycyrrhiza echinata(42% identity and 63% similarity)<ref name = "ref6"/> and CYP81E9 from Medicago truncatula(42% identity and 63% similarity)<ref name="ref7" nearly over the entire region.
===Mutaion===
[[File:FigureOs03g0760200_2.jpg|right|thumb|300px|'''Figure 2.''' '' Bentazon-sensitivity of two mutants (from reference <ref name="ref1" />).'']]
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S and Norin8m have a single-base deletion of G at the 2058th nucleotide and a single-base deletion of C at the 507th in its coding sequence respectively<ref name = "ref1"/>. Both 8077S and Norin8m plants started to show symptoms to bentazon at 100 mg/l and the lethal concentration was about 300 mg/l. The threshold concentrations of the bentazon sensitivity for the mutant plants were about 60-fold lower than those for their wild-type controls<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T13:43:12Z

Nengpan Zhang: /* Expression */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'''Figure 1.''' '' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
Please input evolution information here.

===Mutaion===
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S have a single-base deletion of G at the 2058th nucleotide in its coding sequence and ''CYP81A6'' from Norin8m have a single-base deletion of C at the 507th<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T13:40:38Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots (Figure 1)<ref name = "ref1"/>.

===Evolution===
Please input evolution information here.

===Mutaion===
Two bentazon-lethal mutants 8077S and Norin8m are obtained from γ-radiated ''indica'' cultivar W6154S<ref name = "ref2"/> and ''japonica'' cultivar Norin8<ref name = "ref3"/> respectively. ''CYP81A6'' from 8977S have a single-base deletion of G at the 2058th nucleotide in its coding sequence and ''CYP81A6'' from Norin8m have a single-base deletion of C at the 507th<ref name = "ref1"/>.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T13:18:17Z

Nengpan Zhang: /* Function */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents. The protein coded by this gene confers resistance to two different kinds of herbicides bentazon and sulfonylurea<ref name = "ref1"/>.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots <ref name = "ref1"/>.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

File:FigureOs03g0760200 1.jpg

2014-06-04T11:13:25Z

Nengpan Zhang: Expression ofCYP81A6in various organs of the rice. Total RNAs were isolated from immature panicles (1), leaf sheaths (2), leaf (3), shoots (4) and roots (5). The isolated RNAs were subjected to RT-PCR.Actin 1was used as a control. M is the DNA marker.

Expression ofCYP81A6in various organs of the rice.
Total RNAs were isolated from immature panicles (1), leaf sheaths (2), leaf (3), shoots (4) and roots (5). The isolated RNAs were subjected to RT-PCR.Actin 1was used as a control. M is the DNA marker.

Os03g0760200

2014-06-04T11:07:38Z

Nengpan Zhang:

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
[[File:FigureOs03g0760200_1.jpg|right|thumb|300px|'' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots <ref name = "ref1"/>.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T11:03:37Z

Nengpan Zhang: /* Expression */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
''CYP81A6'' gene is transcribed in all organs of rice and is highly expressed in shoots, leaf, leaf sheaths and immature panicles, while it is transcribed at low level in the roots <ref name = "ref1"/>.[[File:Figure333.jpg|right|thumb|300px|'' Expression of ''CYP81A6'' in various organs of the rice (from reference <ref name="ref1" />).'']]

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T10:53:03Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides. Plant Mol Biol 61(6): 933-943. </ref>
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T10:51:25Z

Nengpan Zhang: /* Function */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = "ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "ref1" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). "Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides." Plant Mol Biol 61(6): 933-943. </ref>
<ref name = "ref1">
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T10:47:13Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1"> Pan, G., et al. (2006). "Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides." Plant Mol Biol 61(6): 933-943. </ref>
<ref name = "ref1">
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T10:45:06Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="ref1">Pan, G., et al. (2006). "Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides." Plant Mol Biol 61(6): 933-943.</ref>

</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T10:35:07Z

Nengpan Zhang: /* Function */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belongs to cytochrome P450 monooxygenases family<ref name = ref1"/>. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="PMID:16927205">
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-04T10:32:51Z

Nengpan Zhang: /* Function */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene also called ''CYP81A6'' gene, encodes a kind of protein named CYP81A6, which belong to cytochrome P450 monooxygenases family. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="PMID:16927205">
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:44:38Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="PMID:16927205">
</references>

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:42:16Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="PMID:16927205">

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:38:07Z

Nengpan Zhang: Undo revision 176897 by Nengpan Zhang (talk)

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="pmid:19825657">

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:32:31Z

Nengpan Zhang:

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="PMID:169272057">

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:30:49Z

Nengpan Zhang: /* References */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
<references>
<ref name="pmid:19825657">

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:29:41Z

Nengpan Zhang: /* Function */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms<ref name = "PMID:16927205" />. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
Please input cited references here.

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

Os03g0760200

2014-06-03T13:20:24Z

Nengpan Zhang: /* Annotated Information */

Please input one-sentence summary here.

==Annotated Information==
===Function===
This gene encodes a kind of cytochrome P450 monooxygenases. Cytochrome P450 monooxygenases are NADPH-dependent heme proteins that cast a large and diverse group of isozymers and mediate a wide arrange of oxidative reactions in plants, animals, and microorganisms. In plants, cytochrome P450s mediate biosynthesis of lignins, terpenoid, and alkaloids, sterols,fatty acids, and many secondary compounds that act as plant defense agents.

===Expression===
Please input expression information here.

===Evolution===
Please input evolution information here.

You can also add sub-section(s) at will.

==Labs working on this gene==
Please input related labs here.

==References==
Please input cited references here.

==Structured Information==
{{JaponicaGene|
GeneName = Os03g0760200|
Description = Cytochrome P450 family protein|
Version = NM_001057877.1 GI:115455482 GeneID:4334183|
Length = 2592 bp|
Definition = Oryza sativa Japonica Group Os03g0760200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:32294151..32296742|
CDS = 32294203..32295126,32295853..32296470|
GCID = <gbrowseImage1>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:32294151..32296742
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcgaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctga</cdnaseq>|
AA = <aaseq>MDNAYIIAILSVAILFLLHYYLLGRGNGGAARLPPGPPAVPILG HLHLVKKPMHATMSRLAERYGPVFSLRLGSRRAVVVSSPGCARECFTEHDVTFANRPR FESQLLVSFNGAALATASYGAHWRNLRRIVAVQLLSAHRVGLMSGLIAGEVRAMVRRM YRAAAASPAGAARIQLKRRLFEVSLSVLMETIAHTKATRPETDPDTDMSVEAQEFKQV VDEIIPHIGAANLWDYLPALRWFDVFGVRRKILAAVSRRDAFLRRLIDAERRRLDDGD EGEKKSMIAVLLTLQKTEPEVYTDNMITALTANLFGAGTETTSTTSEWAMSLLLNHPD TLKKAQAEIDASVGNSRLITADDVTRLGYLQCIVRETLRLYPAAPMLLPHESSADCKV GGYNIPRGSMLLINAYAIHRDPAVWEEPEKFMPERFEDGGCDGNLLMPFGMGRRRCPG ETLALRTVGLVLGTLIQCFDWERVDGVEVDMTEGGGLTIPKVVPLEAMCRPRDAMGGV LRELV</aaseq>|
DNA = <dnaseqindica>53..976#1703..2320#agtgcaccagagtcacagaaacacatcacacattcgtgagctcagcttagccatggataacgcctacattattgccattctctctgtagctatcctcttcttgctccactactacctcctcggccgcggcaatggcggggcggcgcggctgccgccgggtccaccggccgtcccgatcctgggacacctccacctcgtcaagaagccgatgcacgccaccatgtcccgcctcgccgagcggtacgggccggtgttctcgctgcgcctcgggtcgcggcgcgccgtggtggtgtcgtcgccggggtgcgccagggagtgcttcaccgagcacgacgtgaccttcgcgaaccggcccaggttcgagtcgcagctgctggtctcgttcaacggcgccgcgctcgccacggcgagctacggcgcgcactggcgcaacctccgccggatcgtcgccgtgcagctgctctccgcgcaccgcgtcggcctcatgtcggggctcatcgccggcgaggtccgcgccatggtgcggaggatgtaccgcgccgcggccgcgtcccccgccggcgccgcgcgcatccagctgaagcggaggctgttcgaggtctccctcagcgtgctcatggagaccatcgcccacaccaaggcgacccgccccgagacggacccggacaccgacatgtccgtggaagcccaggagtttaagcaggtcgtcgacgagatcatcccgcacatcggcgcggccaacctgtgggactacttgccggcgctccggtggttcgacgtgttcggcgtcaggaggaagatcctcgccgctgtaagccggagggacgcgttccttcgccgcctgatcgacgcggagcggcggaggctggacgacggcgacgagggcgagaagaagagcatgatcgccgtgctgctcactctgcagaagacagagccggaggtgtacaccgataacatgatcacagctctaacggcggtgagttcatcttctgctgttttacctttctgatatctgaattctctcattggtgcgtaattttttttttttggctgtcatcggtatagctttcttaagcactcagtagccttgcaattataaaaagaaaaacaatcagtagctttttacatgctttgagtcagtcagtagcagtgtggcactatcagcattcagcagtattcatgttgtttgctaatcactatcatggtttgagtcagcacaatcagtagcttttgacatggtttgagtcagcagtatcttttctaggaactgaattagttattcatttagtacaacttgtttgtctgtctattgattgctttaaattatttcttctatgcaaccctctaatcctagtatagtactagccttttatatgaagaatcatcaataattttcttctcactttcagtgtagctttacttaatgaatattttgaaagatcgcctagttgccttattataattgtataaaaggaaaacaatcagtagccttttacatggttgagtcagcgagttatcaggagtactattgtttatcatggtagtagcacgatagactattcaacccgggcgattaaaatccttctcccaaatttgtattctttgttttttcctcaaaaattcaccaaactcttggaactattatagttcagttttagacaaaaaaaaaatgaaatcttagttccaccctcttgccgtgcagaacttgttcggagcaggaacagagacaacctcgacgacatcagaatgggcgatgtcgctactgctgaaccaccccgacacactcaagaaagcgcaagccgagatcgacgcatccgtcggcaactctcgcctgatcaccgccgacgacgtgactcgcctcggctacctccagtgcatcgtcagggagacgctccgcctgtaccccgccgcgccgatgctcctcccgcacgagtcctccgccgactgcaaggtcggcggctacaacatcccgcgcgggtcgatgttgctcatcaacgcgtacgccatccaccgtgacccggcggtgtgggaggagccggagaagttcatgccggagaggttcgaggacggcgggtgcgacggcaatctcttgatgccgttcgggatggggaggcggaggtgccccggcgagacgctggcgctgcgcacagtggggttggtgctgggcacgctgatccagtgcttcgactgggagagggtcgacggcgtggaggtcgacatgactgaaggtggcgggctcaccatccccaaggtcgtgccgttggaggccatgtgcaggccgcgcgacgccatgggtggtgttcttcgcgagctcgtctgaatattttttggcggcgtttgcatctccaggacgaactcatgtattgaaagcaccaaaagtaagtagcaaataagcttctcgtgagcatacacataacacatgtgagcttgtaatgtggaataaattacacgtagaggatttggaagagagtgactgcgctagcaatcgctctttgagagttgtgttttacagttttagtgaggaaccaatttgtatgaatgtgcaataatcatgtataaagtataattgtacacgccaggtatttcaatttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057877.1 RefSeq:Os03g0760200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]