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https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168418
Os12g0105300
2014-05-12T10:25:57Z
<p>Shiningmelody: </p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
</references><br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
CDNA = <cdnaseq>Non-protein coding transcript</cdnaseq>|<br />
AA = <aaseq>Non-protein coding transcript</aaseq>|<br />
<br />
DNA=<br />
<dnaseqindica><br />
<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168417
Os12g0105300
2014-05-12T10:23:42Z
<p>Shiningmelody: </p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
</references><br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA=<br />
<dnaseqindica><br />
<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168416
Os12g0105300
2014-05-12T10:22:54Z
<p>Shiningmelody: </p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
</references><br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA=<br />
<dnaseqindica><br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168415
Os12g0105300
2014-05-12T10:21:21Z
<p>Shiningmelody: </p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
</references><br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168414
Os12g0105300
2014-05-12T10:19:56Z
<p>Shiningmelody: </p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168413
Os12g0105300
2014-05-12T10:18:54Z
<p>Shiningmelody: </p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
<br />
<br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168412
Os12g0105300
2014-05-12T10:16:37Z
<p>Shiningmelody: /* References */</p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168411
Os12g0105300
2014-05-12T10:16:13Z
<p>Shiningmelody: /* References */</p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
<ref name="ref3">The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381971，</ref><br />
<ref name="ref4">The map-based sequence of the rice genome.International Rice Genome Sequencing Project. Nature, 2005 Aug 11. PMID 16100779，</ref><br />
<br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168410
Os12g0105300
2014-05-12T10:15:16Z
<p>Shiningmelody: /* References */</p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
<ref name="ref3">The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381971</ref><br />
<ref name="ref4">The map-based sequence of the rice genome.International Rice Genome Sequencing Project. Nature, 2005 Aug 11. PMID 16100779</ref><br />
<br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody
https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0105300&diff=168409
Os12g0105300
2014-05-12T10:14:17Z
<p>Shiningmelody: Created page with "Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02) == Annotated Information == === Function === Ac..."</p>
<hr />
<div>Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
== Annotated Information ==<br />
=== Function ===<br />
Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)<br />
<br />
<br />
=== Gene type===<br />
protein coding<br />
<br />
=== Lineage===<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza<br />
<br />
<br />
=== Evolution ===<br />
This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to<br />
GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.<br />
<br />
=== Knowledge Extension ===<br />
<br />
PROVISIONAL REFSEQ: This record has not yet been subject to final<br />
NCBI review. The reference sequence is identical to AP008218.<br />
On Jun 7, 2010 this sequence version replaced gi:115489835.<br />
The IRGSP pseudomolecules (Build 4.0).<br />
The orientation of the sequence is the short arm to the long arm of<br />
the chromosome.<br />
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,<br />
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14<br />
<br />
The position of gaps in this pseudomolecule with unknown size is<br />
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.<br />
<br />
This sequence entry was annotated by the Rice Annotation Project.<br />
http://rapdb.lab.nig.ac.jp/<br />
<br />
<br />
<br />
== References ==<br />
<references><br />
<ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.<br />
Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref><br />
<ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.<br />
Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref><br />
<ref name="ref3">The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.<br />
Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381971</ref><br />
<ref name="ref4">The map-based sequence of the rice genome.<br />
International Rice Genome Sequencing Project. Nature, 2005 Aug 11. PMID 16100779</ref><br />
<br />
<br />
== Structured Information ==<br />
{{JaponicaGene|<br />
GeneName = Os12g0105300|<br />
<br />
GeneID:9268278|<br />
Length = 8411 bp|<br />
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|<br />
Source = Oryza sativa Japonica Group<br />
<br />
ORGANISM Oryza sativa Japonica Group<br />
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br />
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br />
clade; Ehrhartoideae; Oryzeae; Oryza.<br />
|<br />
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|<br />
AP = Chromosome 12:259563..260472|<br />
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|<br />
GCID = <gbrowseImage1><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage1>|<br />
GSID = <gbrowseImage2><br />
name=NC_008394:40138313..40141055<br />
source=RiceChromosome01<br />
preset=GeneLocation<br />
</gbrowseImage2>|<br />
DNA <br />
>Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)<br />
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC<br />
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG<br />
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC<br />
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC<br />
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA<br />
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT<br />
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC<br />
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA<br />
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG<br />
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA<br />
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA<br />
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG<br />
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA<br />
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA<br />
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG<br />
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT<br />
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC<br />
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC<br />
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC<br />
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt<br />
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg<br />
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac<br />
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg<br />
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa<br />
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga<br />
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac<br />
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat<br />
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct<br />
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt<br />
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg<br />
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc<br />
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt<br />
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc<br />
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat<br />
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta<br />
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag<br />
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag<br />
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg<br />
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc<br />
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg<br />
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac<br />
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta<br />
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct<br />
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc<br />
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg<br />
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag<br />
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca<br />
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc<br />
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca<br />
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat<br />
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt<br />
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct<br />
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt<br />
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc<br />
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg<br />
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa<br />
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA<br />
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC<br />
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA<br />
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC<br />
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC<br />
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC<br />
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA<br />
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG<br />
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT<br />
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC<br />
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA<br />
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC<br />
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC<br />
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA<br />
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA<br />
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG<br />
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG<br />
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA<br />
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA<br />
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA<br />
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT<br />
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG<br />
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA<br />
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA<br />
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT<br />
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT<br />
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA<br />
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA<br />
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT<br />
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC<br />
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT<br />
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC<br />
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta<br />
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt<br />
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat<br />
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga<br />
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc<br />
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat<br />
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct<br />
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt<br />
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta<br />
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt<br />
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa<br />
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat<br />
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA<br />
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG<br />
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT<br />
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA<br />
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT<br />
TCTTTGTATT T</dnaseqindica>|<br />
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|<br />
}}<br />
[[Category:Genes]]<br />
[[Category:Japonica mRNA]]<br />
[[Category:Oryza Sativa Japonica Group]]<br />
[[Category:Japonica Genes]]<br />
[[Category:Japonica Chromosome 12]]<br />
[[Category:Chromosome 12]]</div>
Shiningmelody