RiceWiki - User contributions [en]

Os08g0453733

2017-03-24T08:43:11Z

Xysj2019:

The rice '''Os08g0453733''' was reported as ''' OsrbohE''' in 2005 <ref name="ref1" /> by researchers from the USA.
 
==Annotated Information==
===Gene Symbol===
*'''Os08g0453733 <=> OsrbohE'''
 
===Function===
*'''OsrbohE''' is involved in late H 2O2 production during the immune response.
*'''OsrbohE''' regulate different signaling pathways in the plant immune response.
 
===Expression===
*Among immune related genes, the induction of EL2 and LOX genes is controlled by ROS generated by '''OsrbohE''', whereas expression of Cht-1 gene is regulated by both OsrbohA and '''OsrbohE'''.
 

==Labs working on this gene==
*Graduate School of Biological Sciences, Nara Institute of Science and Technology (NAIST), 8916-5, Takayama Ikoma, Nara 630-0101, Japan;
*Department of Environmental Biology, Faculty of Bio-Science, Nagahama Institute of Bio-Science and Technology, 1266 Tamura-cho, Nagahama Shiga, 526-0829, Japan
 
==References==
<references>
<ref name="ref1">
Yoshie, Y., Goto, K., Takai, R., Iwano, M., Takayama, S., & Isogai, A., et al. (2005). Function of the rice gp91^ homologs osrboha and osrbohe genes in ros-dependent plant immune responses. Plant Biotechnology, 22(2), 127-135.
</ref>
</references>
 
==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 08]]

Os04g0529100

2017-03-07T09:28:57Z

Xysj2019:

The rice '''''Os04g0529100''''' was reported as '''''OsERF#045''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0529100''''' '''''<=>''''' '''''OsERF#045, OsERF045, OsERF45, AP2/EREBP#119, AP2/EREBP119'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).<ref name="ref2" />

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
* <ref name="ref3">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os04g0529100

2017-03-07T09:28:22Z

Xysj2019: /* References */

The rice '''''Os04g0529100''''' was reported as '''''OsERF#045''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0529100''''' '''''<=>''''' '''''OsERF#045, OsERF045, OsERF45, AP2/EREBP#119, AP2/EREBP119'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
<references>
* <ref name="ref1">
Nakano T, Suzuki K, Fujimura T, Shinshi H. Genome-wide analysis of the ERF
gene family in Arabidopsis and rice. Plant Physiol. 2006 Feb;140(2):411-32.
PubMed PMID: 16407444; PubMed Central PMCID: PMC1361313.
</ref>
* <ref name="ref2">
Riechmann JL, Meyerowitz EM. The AP2/EREBP family of plant transcription
factors. Biol Chem. 1998 Jun;379(6):633-46. Review. PubMed PMID: 9687012.
</ref>
* <ref name="ref3">
Chuck G, Muszynski M, Kellogg E, Hake S, Schmidt RJ. The control of spikelet
meristem identity by the branched silkless1 gene in maize. Science. 2002 Nov
8;298(5596):1238-41. PubMed PMID: 12424380.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os04g0529100

2017-03-07T09:24:31Z

Xysj2019:

The rice '''''Os04g0529100''''' was reported as '''''OsERF#045''''' in 2006 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0529100''''' '''''<=>''''' '''''OsERF#045, OsERF045, OsERF45, AP2/EREBP#119, AP2/EREBP119'''''

===Function===
* Genes in the ERF family encode transcriptional regulators with a variety of functions involved in the developmental and physiological processes in plants.
* It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
* Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development (Elliott et al., 1996), spikelet meristem determinacy (Chuck et al., 1998), leaf epidermal cell identity (Moose and Sisco, 1996), and embryo development (Boutilier et al., 2002).

===Evolution===
* The ERF family is a large gene family of transcription factors and is part of the AP2/ERF superfamily, which also contains the AP2 and RAV families
* The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding.
* The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, including VP1/ABI3, in addition to the single AP2/ERF domain.
* The expansion of the ERF family in plants might have been due to chromosomal/segmental duplication and tandem duplication, as well as more ancient transposition and homing.
* Since rice is a cultivated species, selection either during domestication from its wild ancestor or during agricultural improvement in the subsequent time may also have been important for the evolution of rice ERF family.

You can also add sub-section(s) at will.

==Labs working on this gene==
* Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki 305–8566, Japan (T.N., K.S., H.S.);
* Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305–8672, Japan (T.N., T.F.)

==References==
Please input cited references here.

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

Os01g0246700

2017-03-07T09:11:13Z

Xysj2019:

The rice '''''Os01g0246700''''' was reported as '''''OsWRKY1''''' in 2007 <ref name="ref1" /> by researchers from USA.

==Annotated Information==
===Gene Symbol===
*'''''Os01g0246700''''' '''''<=>''''' '''''OsWRKY1, OsWRKY1v2'''''

===Function===
* The plant '''''WRKY''''' transcription factors are involved in the regulation of various biological processes.
* The '''''WRKY''''' genes encode zinc-finger proteins, which may play import roles in disease resistance and responses to salicylic acid and jasmonic acid, seed development and germination mediated by gibberellins, other developmental processes including senescence, and responses to abiotic stresses and abscisic acid in rice.
* Several studies have suggested that some '''''WRKY''''' proteins may be the target of mitogen-activated protein kinases (MAPK) that alter their activity.
* The researchers think that the studies of '''''WRKY''''' transcription factors family will not only further our understanding of the fundamental processes that are controlled by WRKY genes in plants, but also help enhance agricultural productivity.

===Expression===
* WRKY mRNA accumulates rapidly after induction and seemingly does not require the synthesis of new transcription factors. <ref name="ref2" />

===Evolution===
* The '''''WRKY''''' gene family is widely distributed among terrestrial plants and is present in both monocotyledonous and dicotyle-donous plants.
* There are more '''''WRKY''''' family members in rice than in Arabidopsis.
* A phylogenetic analysis of WRKY domains between rice and Arabidopsis shows WRKY domains of the same type forming independent domains within their species, suggesting that numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago.<ref name="ref3" />

You can also add sub-section(s) at will.

==Labs working on this gene==
* Bioinformatics Core, School of Life Sciences, University of Nevada, Las Vegas, Nevada 89154, USA

==References==
<references>
* <ref name="ref1">
Xu H, Watanabe KA, Zhang L, Shen QJ. WRKY transcription factor genes in wild
rice Oryza nivara. DNA Res. 2016 Aug;23(4):311-23. doi: 10.1093/dnares/dsw025.
PubMed PMID: 27345721; PubMed Central PMCID: PMC4991837.
</ref>
* <ref name="ref2">
Eulgem T, Rushton PJ, Robatzek S, Somssich IE. The WRKY superfamily of plant
transcription factors. Trends Plant Sci. 2000 May;5(5):199-206. Review. PubMed
PMID: 10785665.
</ref>
* <ref name="ref3">
Zhang Y, Wang L. The WRKY transcription factor superfamily: its origin in
eukaryotes and expansion in plants. BMC Evol Biol. 2005 Jan 3;5:1. PubMed PMID:
15629062; PubMed Central PMCID: PMC544883.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

Test

2017-03-07T05:03:28Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|Finished
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|Finished
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|Finished
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|Finished
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|Finished
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|Finished
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|Finished
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Os01g0785400

2017-03-07T05:03:02Z

Xysj2019: /* Annotated Information */

The rice '''''Os01g0785400''''' was reported as '''''OsGH3.1''''' in 2009 <ref name="ref1" /> by researchers from France.

==Annotated Information==
[[File:Mature transgenic rice plants overexpressing OsGH3.1.jpg|right|thumb|197px|'''Figure 1.''' ''Mature transgenic rice plants overexpressing OsGH3.1.<ref name="ref1" />.'']]
===Gene Symbol===
*'''''Os01g0785400''''' '''''<=>''''' '''''OsGH3-1, OsGH3.1, LC1, GH3.1, OsLC1'''''
===Function===
* GH3 genes are main components of the hormonal mechanism regulating growth and development and, hence, are deeply involved in a broad range of physiological processes..<ref name="ref1"/>
* They are implicated in hormonal homeostasis through the conjugation to amino acids of the free form of essential plant growth regulators such as indoleacetic and jasmonic acids.

===Phenotypic analysis===
* '''''OsGH3.1''''' overexpression in rice caused dwarfism and significantly reduced both free auxin content and cell elongation.
* Functional classification of the transcriptomic profiling revealed that most genes involved in auxin biosynthesis and auxin signaling inhibition were induced and repressed, respectively.
* Many genes related to cell organization and biogenesis were also significantly downregulated. The survey also showed that, although the response to abiotic stresses was not clearly stimulated, OsGH3.1 overexpression did activate a significant number of defense-related genes.
* In successive bioassays, it was demonstrated that the resistance of rice plants to pathogen infection, evaluated with two different Magnaporthe grisea strains, was higher in the transformants overexpressing '''''OsGH3.1'''''.

===Expression===
* '''''OsGH3.1''''' Is Expressed in Various Tissues. qRT–PCR analysis revealed that '''''OsGH3.1''''' is expressed in roots, shoots, flowers, seedlings, leaves, and sheaths, with a higher expression in collars.

==References==
<references>
<ref name="ref1">Domingo C, Andrés F, Tharreau D, Iglesias DJ, Talón M. Constitutive expression
of OsGH3.1 reduces auxin content and enhances defense response and resistance to
a fungal pathogen in rice. Mol Plant Microbe Interact. 2009 Feb;22(2):201-10.
doi: 10.1094/MPMI-22-2-0201. PubMed PMID: 19132872.
</ref>

</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

Os01g0785400

2017-03-07T05:02:53Z

Xysj2019: /* Annotated Information */

The rice '''''Os01g0785400''''' was reported as '''''OsGH3.1''''' in 2009 <ref name="ref1" /> by researchers from France.

==Annotated Information==
[[File:Mature transgenic rice plants overexpressing OsGH3.1.jpg|right|thumb|127px|'''Figure 1.''' ''Mature transgenic rice plants overexpressing OsGH3.1.<ref name="ref1" />.'']]
===Gene Symbol===
*'''''Os01g0785400''''' '''''<=>''''' '''''OsGH3-1, OsGH3.1, LC1, GH3.1, OsLC1'''''
===Function===
* GH3 genes are main components of the hormonal mechanism regulating growth and development and, hence, are deeply involved in a broad range of physiological processes..<ref name="ref1"/>
* They are implicated in hormonal homeostasis through the conjugation to amino acids of the free form of essential plant growth regulators such as indoleacetic and jasmonic acids.

===Phenotypic analysis===
* '''''OsGH3.1''''' overexpression in rice caused dwarfism and significantly reduced both free auxin content and cell elongation.
* Functional classification of the transcriptomic profiling revealed that most genes involved in auxin biosynthesis and auxin signaling inhibition were induced and repressed, respectively.
* Many genes related to cell organization and biogenesis were also significantly downregulated. The survey also showed that, although the response to abiotic stresses was not clearly stimulated, OsGH3.1 overexpression did activate a significant number of defense-related genes.
* In successive bioassays, it was demonstrated that the resistance of rice plants to pathogen infection, evaluated with two different Magnaporthe grisea strains, was higher in the transformants overexpressing '''''OsGH3.1'''''.

===Expression===
* '''''OsGH3.1''''' Is Expressed in Various Tissues. qRT–PCR analysis revealed that '''''OsGH3.1''''' is expressed in roots, shoots, flowers, seedlings, leaves, and sheaths, with a higher expression in collars.

==References==
<references>
<ref name="ref1">Domingo C, Andrés F, Tharreau D, Iglesias DJ, Talón M. Constitutive expression
of OsGH3.1 reduces auxin content and enhances defense response and resistance to
a fungal pathogen in rice. Mol Plant Microbe Interact. 2009 Feb;22(2):201-10.
doi: 10.1094/MPMI-22-2-0201. PubMed PMID: 19132872.
</ref>

</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

Os01g0785400

2017-03-07T05:02:41Z

Xysj2019: /* Expression */

The rice '''''Os01g0785400''''' was reported as '''''OsGH3.1''''' in 2009 <ref name="ref1" /> by researchers from France.

==Annotated Information==
[[File:Mature transgenic rice plants overexpressing OsGH3.1.jpg|right|thumb|227px|'''Figure 1.''' ''Mature transgenic rice plants overexpressing OsGH3.1.<ref name="ref1" />.'']]
===Gene Symbol===
*'''''Os01g0785400''''' '''''<=>''''' '''''OsGH3-1, OsGH3.1, LC1, GH3.1, OsLC1'''''
===Function===
* GH3 genes are main components of the hormonal mechanism regulating growth and development and, hence, are deeply involved in a broad range of physiological processes..<ref name="ref1"/>
* They are implicated in hormonal homeostasis through the conjugation to amino acids of the free form of essential plant growth regulators such as indoleacetic and jasmonic acids.

===Phenotypic analysis===
* '''''OsGH3.1''''' overexpression in rice caused dwarfism and significantly reduced both free auxin content and cell elongation.
* Functional classification of the transcriptomic profiling revealed that most genes involved in auxin biosynthesis and auxin signaling inhibition were induced and repressed, respectively.
* Many genes related to cell organization and biogenesis were also significantly downregulated. The survey also showed that, although the response to abiotic stresses was not clearly stimulated, OsGH3.1 overexpression did activate a significant number of defense-related genes.
* In successive bioassays, it was demonstrated that the resistance of rice plants to pathogen infection, evaluated with two different Magnaporthe grisea strains, was higher in the transformants overexpressing '''''OsGH3.1'''''.

===Expression===
* '''''OsGH3.1''''' Is Expressed in Various Tissues. qRT–PCR analysis revealed that '''''OsGH3.1''''' is expressed in roots, shoots, flowers, seedlings, leaves, and sheaths, with a higher expression in collars.

==References==
<references>
<ref name="ref1">Domingo C, Andrés F, Tharreau D, Iglesias DJ, Talón M. Constitutive expression
of OsGH3.1 reduces auxin content and enhances defense response and resistance to
a fungal pathogen in rice. Mol Plant Microbe Interact. 2009 Feb;22(2):201-10.
doi: 10.1094/MPMI-22-2-0201. PubMed PMID: 19132872.
</ref>

</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

Os01g0785400

2017-03-07T05:02:05Z

Xysj2019: /* Annotated Information */

The rice '''''Os01g0785400''''' was reported as '''''OsGH3.1''''' in 2009 <ref name="ref1" /> by researchers from France.

==Annotated Information==
[[File:Mature transgenic rice plants overexpressing OsGH3.1.jpg|right|thumb|227px|'''Figure 1.''' ''Mature transgenic rice plants overexpressing OsGH3.1.<ref name="ref1" />.'']]
===Gene Symbol===
*'''''Os01g0785400''''' '''''<=>''''' '''''OsGH3-1, OsGH3.1, LC1, GH3.1, OsLC1'''''
===Function===
* GH3 genes are main components of the hormonal mechanism regulating growth and development and, hence, are deeply involved in a broad range of physiological processes..<ref name="ref1"/>
* They are implicated in hormonal homeostasis through the conjugation to amino acids of the free form of essential plant growth regulators such as indoleacetic and jasmonic acids.

===Phenotypic analysis===
* '''''OsGH3.1''''' overexpression in rice caused dwarfism and significantly reduced both free auxin content and cell elongation.
* Functional classification of the transcriptomic profiling revealed that most genes involved in auxin biosynthesis and auxin signaling inhibition were induced and repressed, respectively.
* Many genes related to cell organization and biogenesis were also significantly downregulated. The survey also showed that, although the response to abiotic stresses was not clearly stimulated, OsGH3.1 overexpression did activate a significant number of defense-related genes.
* In successive bioassays, it was demonstrated that the resistance of rice plants to pathogen infection, evaluated with two different Magnaporthe grisea strains, was higher in the transformants overexpressing '''''OsGH3.1'''''.

===Expression===
* '''''OsGH3.1''''' Is Expressed in Various Tissues. qRT–PCR analysis revealed that '''''OsGH3.1''''' is expressed in roots, shoots, flowers, seedlings, leaves, and sheaths, with a higher expression in collars.
* Promoter–GUS fusion study indicated that '''''OsGH3.1''''' is highly transcribed in the seedlings, stems, leaves, and young flowers.

==References==
<references>
<ref name="ref1">Domingo C, Andrés F, Tharreau D, Iglesias DJ, Talón M. Constitutive expression
of OsGH3.1 reduces auxin content and enhances defense response and resistance to
a fungal pathogen in rice. Mol Plant Microbe Interact. 2009 Feb;22(2):201-10.
doi: 10.1094/MPMI-22-2-0201. PubMed PMID: 19132872.
</ref>

</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

Os01g0785400

2017-03-07T05:01:55Z

Xysj2019: /* Annotated Information */

The rice '''''Os01g0785400''''' was reported as '''''OsGH3.1''''' in 2009 <ref name="ref1" /> by researchers from France.

==Annotated Information==
[[File:Mature transgenic rice plants overexpressing OsGH3.1.jpg|right|thumb|427px|'''Figure 1.''' ''Mature transgenic rice plants overexpressing OsGH3.1.<ref name="ref1" />.'']]
===Gene Symbol===
*'''''Os01g0785400''''' '''''<=>''''' '''''OsGH3-1, OsGH3.1, LC1, GH3.1, OsLC1'''''
===Function===
* GH3 genes are main components of the hormonal mechanism regulating growth and development and, hence, are deeply involved in a broad range of physiological processes..<ref name="ref1"/>
* They are implicated in hormonal homeostasis through the conjugation to amino acids of the free form of essential plant growth regulators such as indoleacetic and jasmonic acids.

===Phenotypic analysis===
* '''''OsGH3.1''''' overexpression in rice caused dwarfism and significantly reduced both free auxin content and cell elongation.
* Functional classification of the transcriptomic profiling revealed that most genes involved in auxin biosynthesis and auxin signaling inhibition were induced and repressed, respectively.
* Many genes related to cell organization and biogenesis were also significantly downregulated. The survey also showed that, although the response to abiotic stresses was not clearly stimulated, OsGH3.1 overexpression did activate a significant number of defense-related genes.
* In successive bioassays, it was demonstrated that the resistance of rice plants to pathogen infection, evaluated with two different Magnaporthe grisea strains, was higher in the transformants overexpressing '''''OsGH3.1'''''.

===Expression===
* '''''OsGH3.1''''' Is Expressed in Various Tissues. qRT–PCR analysis revealed that '''''OsGH3.1''''' is expressed in roots, shoots, flowers, seedlings, leaves, and sheaths, with a higher expression in collars.
* Promoter–GUS fusion study indicated that '''''OsGH3.1''''' is highly transcribed in the seedlings, stems, leaves, and young flowers.

==References==
<references>
<ref name="ref1">Domingo C, Andrés F, Tharreau D, Iglesias DJ, Talón M. Constitutive expression
of OsGH3.1 reduces auxin content and enhances defense response and resistance to
a fungal pathogen in rice. Mol Plant Microbe Interact. 2009 Feb;22(2):201-10.
doi: 10.1094/MPMI-22-2-0201. PubMed PMID: 19132872.
</ref>

</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

Os01g0785400

2017-03-07T05:01:02Z

Xysj2019:

The rice '''''Os01g0785400''''' was reported as '''''OsGH3.1''''' in 2009 <ref name="ref1" /> by researchers from France.

==Annotated Information==
[[File:Mature transgenic rice plants overexpressing OsGH3.1.jpg|300px|]]
===Gene Symbol===
*'''''Os01g0785400''''' '''''<=>''''' '''''OsGH3-1, OsGH3.1, LC1, GH3.1, OsLC1'''''
===Function===
* GH3 genes are main components of the hormonal mechanism regulating growth and development and, hence, are deeply involved in a broad range of physiological processes..<ref name="ref1"/>
* They are implicated in hormonal homeostasis through the conjugation to amino acids of the free form of essential plant growth regulators such as indoleacetic and jasmonic acids.

===Phenotypic analysis===
* '''''OsGH3.1''''' overexpression in rice caused dwarfism and significantly reduced both free auxin content and cell elongation.
* Functional classification of the transcriptomic profiling revealed that most genes involved in auxin biosynthesis and auxin signaling inhibition were induced and repressed, respectively.
* Many genes related to cell organization and biogenesis were also significantly downregulated. The survey also showed that, although the response to abiotic stresses was not clearly stimulated, OsGH3.1 overexpression did activate a significant number of defense-related genes.
* In successive bioassays, it was demonstrated that the resistance of rice plants to pathogen infection, evaluated with two different Magnaporthe grisea strains, was higher in the transformants overexpressing '''''OsGH3.1'''''.

===Expression===
* '''''OsGH3.1''''' Is Expressed in Various Tissues. qRT–PCR analysis revealed that '''''OsGH3.1''''' is expressed in roots, shoots, flowers, seedlings, leaves, and sheaths, with a higher expression in collars.
* Promoter–GUS fusion study indicated that '''''OsGH3.1''''' is highly transcribed in the seedlings, stems, leaves, and young flowers.

==References==
<references>
<ref name="ref1">Domingo C, Andrés F, Tharreau D, Iglesias DJ, Talón M. Constitutive expression
of OsGH3.1 reduces auxin content and enhances defense response and resistance to
a fungal pathogen in rice. Mol Plant Microbe Interact. 2009 Feb;22(2):201-10.
doi: 10.1094/MPMI-22-2-0201. PubMed PMID: 19132872.
</ref>

</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

Test

2017-03-07T02:43:35Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|Finished
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|Finished
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|Finished
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|Finished
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|Finished
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|Finished
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Test

2017-03-07T02:30:16Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|Finished
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|Finished
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|Finished
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Test

2017-03-07T02:29:42Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|Finished
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|Finished
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|Finished
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

RiceWiki:TBC

2017-03-07T02:06:40Z

Xysj2019:

To be curated 
'''Every Gene Has A Story ！'''
{|class="wikitable" style="width:90%;text-align:center"
|-
!Gene name
!RAP ID
!MSU ID
!Reference Title
|-
|''OsSOS1''
|[[Os12g0641100]]
|LOC_Os12g44360
|Huan Wang;Meishan Zhang;Rui Guo;Decheng Shi;Bao Liu;Xiuyun Lin;Chunwu Yan Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.)BMC Plant Biology, 2012, 12: 194
|-
|''OsCCD1''
|[[Os12g0640600]]
|LOC_Os12g44310
|Andrea Ilg;Qiuju Yu;Patrick Schaub;Peter Beyer;Salim Al-Babili Overexpression of the rice carotenoid cleavage dioxygenase 1 gene in Golden Rice endosperm suggests apocarotenoids as substrates in planta Planta, 2010, 232(3): 691-699
|-
|''OsPTR2''
|[[Os12g0638200]]
|LOC_Os12g44100
|Yuge Li;Jie Ouyang;Ya-Yun Wang;Rui Hu;Kuaifei Xia;Jun Duan;Yaqin Wang;Yi-Fang Tsay;Mingyong Zhang Disruption of the rice nitrate transporter OsNPF2.2 hinders root-to-shoot nitrate transport and vascular development Scientific Reports, 2015, 5: 9635
|-
|''Osgr-rbp4''
|[[Os12g0632000]]
|LOC_Os12g43600
|Chandan Sahi;Manu Agarwal;Amanjot Singha;Anil Grover Molecular characterization of a novel isoform of rice (Oryza sativa L.) glycine rich-RNA binding protein and evidence for its involvement in high temperature stress response Plant Science, 2007, 173(2): 144-155
|-
|''TOND1''
|[[Os12g0630100]]
|LOC_Os12g43440
|Yangjun Zhang;Lubin Tan;Zuofeng Zhu;Lixing Yuan;Daoxin Xie;Chuanqing Sun TOND1 confers tolerance to nitrogen deficiency in rice The Plant Journal, 2014,
|-
|''OsSpo11-4''
|[[Os12g0622500]]
|LOC_Os12g42760
|Yoshinori Shingu;Takeshi Tokai;Yasuo Agawa;Kentaro Toyota;Selina Ahamed;Makiko Kawagishi-Kobayashi;Akira Komatsu;Tsutomu Mikawa;Masa-Toshi Yamamoto;Kyo Wakasa;Takehiko Shibata;Kohji Kusano The double-stranded break-forming activity of plant SPO11s and a novel rice SPO11 revealed by a Drosophila bioassay BMC Microbiology, 2012, 13: 1
|-
|''OsYABBY6''
|[[Os12g0621100]]
|LOC_Os12g42610
|Taiyo Toriba;Kohsuke Harada;Atsushi Takamura;Hidemitsu Nakamura;Hiroaki Ichikawa;Takuya Suzaki;Hiro-Yuki Hirano Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1 Molecular Genetics and Genomics, 2007, 277(5): 457-468
|-
|''OsHAP2F''
|[[Os12g0618600]]
|LOC_Os12g42400
|Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
|-
|''OsPPKL3''
|[[Os12g0617900]]
|LOC_Os12g42310
| Xiaojun Zhang;Jianfei Wang;Ji Huang;Hongxia Lan;Cailin Wang;Congfei Yin;Yunyu Wu;Haijuan Tang;Qian Qian;Jiayang Li;Hongsheng Zhang Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice Proceedings of the National Academy of Sciences, 2012, 109(52): 21534-21539
|-
|''OsNCED5''
|[[Os12g0617400]]
|LOC_Os12g42280
|Guohui Zhu;Nenghui Ye;Jianhua Zhang Glucose-Induced Delay of Seed Germination in Rice is Mediated by the Suppression of ABA Catabolism Rather Than an Enhancement of ABA Biosynthesis Plant and Cell Physiology, 2009, 50(3): 644-651
|-
|''OsPCF8''
|[[Os12g0616400]]
|LOC_Os12g42190
|CHUNHUA YANG;DAYONG LI;DONGHAI MAO;XUE LIU;CHENGJUN JI;XIAOBING LI;XIANFENG ZHAO;ZHUKUAN CHENG;CAIYAN CHEN;LIHUANG ZHU Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.) Plant, Cell & Environment, 2013, 36(12): 2207-2218
|-
|''OsPID''
|[[Os12g0614600]]
|LOC_Os12g42020
|Yutaka Morita;Junko Kyozuka Characterization of OsPID, the Rice Ortholog of PINOID, and its Possible Involvement in the Control of Polar Auxin Transport Plant and Cell Physiology, 2007, 48(3): 540-549
|-
|''OsARF25''
|[[Os12g0613700]]
|LOC_Os12g41950
| YanHua Qi;SuiKang Wang;ChenJia Shen;SaiNa Zhang;Yue Chen;YanXia Xu;Yu Liu;YunRong Wu;DeAn Jiang OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa) New Phytologist, 2012, 193(1): 109-120
|-
|''OsTRBF2''
|[[Os12g0613300]]
|LOC_Os12g41920
| Mi Young Byun;Jong-Pil Hong;Woo Taek Kim Identification and characterization of three telomere repeat-binding factors in rice Biochemical and Biophysical Research Communications, 2008, 372(1): 85-90
|-
|''OsHAP2B''
|[[Os12g0613000]]
|LOC_Os12g41880
|Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
|-
|''OspPLAIIIζ''
|[[Os12g0611300]]
|LOC_Os12g41720
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OMTN3''
|[[Os12g0610600]]
|LOC_Os12g41680
|Yujie Fang;Kabin Xie;Lizhong Xiong Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice Journal of Experimental Botany, 2014, 65(8): 2119-2135
|-
|''OsCam3''
|[[Os12g0603800]]
|LOC_Os12g41110
|Aumnart Chinpongpanich;Nuchanat Wutipraditkul;Sarut Thairat;Teerapong Buaboocha Biophysical characterization of calmodulin and calmodulin-like proteins from rice, Oryza sativa L. Acta Biochimica et Biophysica Sinica, 2011, 43(11): 867-876
|-
|''OsbZIP88''
|[[Os12g0601800]]
|LOC_Os12g40920
|Qian Ji;Liang-sheng Zhang;Yi-fei Wang;Jian Wang Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa Journal of Shanghai University (English Edition), 2009, 13(2): 174-182
|-
|''OsWRKY83''
|[[Os12g0597700]]
|LOC_Os12g40570
|Christian A. Ross;Yue Liu;Qingxi J. Shen The WRKY Gene Family in Rice (Oryza sativa) Journal of Integrative Plant Biology, 2007, 49(6): 827-842
|-
|''OsUAH''
|[[Os12g0597500]]
|LOC_Os12g40550
|Juan Li;Rui-Ying Qin;Hao Li;Rong-Fang Xu;Ya-Chun Yang;Da-Hu Ni;Hui Ma;Li Li;Peng-Cheng Wei;Jian-Bo Yang Low-Temperature-Induced Expression of Rice Ureidoglycolate Amidohydrolase is Mediated by a C-Repeat/Dehydration Responsive Element that Specifically Interacts with Rice C-Repeat-Binding Factor 3 Frontiers in Plant Science, 2015, 6: 1011
|-
|''HSA1a''
|[[Os12g0589400]]
|LOC_Os12g39880
|Takahiko Kubo;Tomonori Takashi;Motoyuki Ashikari;Atsushi Yoshimura;Nori Kurata Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice Molecular Plant, 2016, 9(2): 221-232
|-
|''OsNAAT6''
|[[Os12g0588900]]
|LOC_Os12g39840
|Haruhiko Inoue;Michiko Takahashi;Takanori Kobayashi;Motofumi Suzuki;Hiromi Nakanishi;Satoshi Mori;Naoko K. Nishizawa Identification and localisation of the rice nicotianamine aminotransferase gene OsNAAT1 expression suggests the site of phytosiderophore synthesis in rice Plant Molecular Biology, 2008, 66(1-2): 193-203
|-
|''CycD5;2''
|[[Os12g0588800]]
|LOC_Os12g39830
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|-
|''OsSAPK9''
|[[Os12g0586100]]
|LOC_Os12g39630
|Mei-Rong Xu;Li-Yu Huang;Fan Zhang;Ling-Hua Zhu;Yong-Li Zhou;Zhi-Kang Li Genome-Wide Phylogenetic Analysis of Stress-Activated Protein Kinase Genes in Rice (OsSAPKs) and Expression Profiling in Response to Xanthomonas oryzae pv. oryzicola Infection Plant Molecular Biology Reporter, 2013, 31(4): 877-885
|-
|''ZFP252''
|[[Os12g0583700]]
|LOC_Os12g39400
|Dong-Qing Xu;Ji Huang;Shu-Qiao Guo;Xia Yang;Yong-Mei Bao;Hai-Juan Tang;Hong-Sheng Zhang Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.) FEBS Letters, 2008, 582(7): 1037-1043
|-
|''CycA3;2''
|[[Os12g0581800]]
|LOC_Os12g39210
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|-
|''ZOS12-7''
|[[Os12g0578800]]
|LOC_Os12g38960
|Duarte D. Figueiredo;Pedro M. Barros;André M. Cordeiro;Tânia S. Serra;Tiago Lourenço;Subhash Chander;M. Margarida Oliveira;Nelson J. M. Saibo Seven zinc-finger transcription factors are novel regulators of the stress responsive gene OsDREB1B Journal of Experimental Botany, 2012, 63(10): 3643-3656
|-
|''OsMYB91''
|[[Os12g0572000]]
|LOC_Os12g38400
| Ning Zhu;Saifeng Cheng;Xiaoyun Liu;Hao Du;Mingqiu Dai;Dao-Xiu Zhou;Wenjing Yang;Yu Zhao The R2R3-type MYB gene OsMYB91 has a function in coordinating plant growth and salt stress tolerance in rice Plant Science, 2015, 236: 146-156
|-
|''Spl11''
|[[Os12g0570000]]
|LOC_Os12g38210
|Jinling Liu;Chan Ho Park;Feng He;Minoru Nagano;Mo Wang;Maria Bellizzi;Kai Zhang;Xiaoshan Zeng;Wende Liu;Yuese Ning;Yoji Kawano;Guo-Liang Wang The RhoGAP SPIN6 Associates with SPL11 and OsRac1 and Negatively Regulates Programmed Cell Death and Innate Immunity in Rice PLoS Pathogens, 2015, 11(2): e1004629
|-
|''OsBOR1''
|[[Os12g0566000]]
|LOC_Os12g37840
|Yuko Nakagawa;Hideki Hanaoka;Masaharu Kobayashi;Kazumaru Miyoshi;Kyoko Miwa;Toru Fujiwara Cell-Type Specificity of the Expression of Os BOR1, a Rice Efflux Boron Transporter Gene, Is Regulated in Response to Boron Availability for Efficient Boron Uptake and Xylem Loading The Plant Cell, 2007, 19(8): 2624-2635
|-
|''OsLOX11''
|[[Os12g0559200]]
|LOC_Os12g37260
|Soma S. Marla;V. K. Singh LOX genes in blast fungus (Magnaporthe grisea) resistance in rice Functional & Integrative Genomics, 2012, 12(2): 265-275
|-
|''OsDi19-7''
|[[Os12g0556100]]
|LOC_Os12g36900
|Lili Wang;Changchun Yu;Cong Chen;Chunlan He;Yingguo Zhu;Wenchao Huang Identification of rice Di19 family reveals OsDi19-4 involved in drought resistance Plant Cell Reports, 2014, 33(12): 2047-2062
|-
|''OspPLAIIλ''
|[[Os12g0552200]]
|LOC_Os12g36610
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OspPLAIIκ''
|[[Os12g0551600]]
|LOC_Os12g36530
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OsNDPK2''
|[[Os12g0548300]]
|LOC_Os12g36194
|Song Mi Cho;Seo Ho Shin;Kwang Sang Kim;Young Cheol Kim;Moo Young Eun;Baik Ho Cho Enhanced Expression of a Gene Encoding a Nucleoside Diphosphate Kinase 1 (OsNDPK1) in Rice Plants upon Infection with Bacterial Pathogens Molecules and Cells, 2004, 18(3): 390-395
|-
|''pms3''
|[[Os12g0545900]]
|LOC_Os12g36030
|Hai Zhou;Qinjian Liu;Jing Li;Dagang Jiang;Lingyan Zhou;Ping Wu;Sen Lu;Feng Li;Liya Zhu;Zhenlan Liu;Letian Chen;Yao-Guang Liu;Chuxiong Zhuang Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA Cell Research, 2012, 22(4): 649-660
|-
|''Osrboh9''
|[[Os12g0541300]]
|LOC_Os12g35610
|Dongping Zhang;Li Chen;Dahong Li;Bing Lv;Yun Chen;Jingui Chen;XuejiaoYan;Jiansheng Liang OsRACK1 Is Involved in Abscisic Acid- and H2O2-Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.) PLoS ONE, 2014, 9(5): e97120
|-
|''OsGRX29''
|[[Os12g0538700]]
|LOC_Os12g35340
|Rohini Garg;Shalu Jhanwar;Akhilesh K. Tyagi;Mukesh Jain Genome-Wide Survey and Expression Analysis Suggest Diverse Roles of Glutaredoxin Gene Family Members During Development and Response to Various Stimuli in Rice DNA Research, 2010, 17(6): 353-367
|-
|''OsGRX28''
|[[Os12g0538600]]
|LOC_Os12g35330
|Rohini Garg;Shalu Jhanwar;Akhilesh K. Tyagi;Mukesh Jain Genome-Wide Survey and Expression Analysis Suggest Diverse Roles of Glutaredoxin Gene Family Members During Development and Response to Various Stimuli in Rice DNA Research, 2010, 17(6): 353-367
|-
|''OsVIL2''
|[[Os12g0533500]]
|LOC_Os12g34850
|Jungil Yang;Shinyong Lee;Runlai Hang;Sung-Ryul Kim;Yang-Seok Lee;Xiaofeng Cao;Richard Amasino;Gynheung An OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice The Plant Journal, 2013, 73(4): 566-578
|-
|''TAM1''
|[[Os12g0520200]]
|LOC_Os12g33610
|Bradley W. Tonnessen;Patricia Manosalva;Jillian M. Lang;Marietta Baraoidan;Alicia Bordeos;Ramil Mauleon;James Oard;Scot Hulbert;Hei Leung;Jan E. Leach Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance Plant Molecular Biology, 2015, 87(3): 273-286
|-
|''OsMYB46''
|[[Os12g0515300]]
|LOC_Os12g33070
|Ruiqin Zhong;Chanhui Lee;Ryan L. McCarthy;Cromwell K. Reeves;Evan G. Jones;Zheng-Hua Ye Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors Plant and Cell Physiology, 2011, 52(10): 1856-1871
|-
|''SAB23''
|[[Os12g0514400]]
|LOC_Os12g32980
|Young-Su Seo;Mawsheng Chern;Laura E. Bartley;Muho Han;Ki-Hong Jung;Insuk Lee;Harkamal Walia;Todd Richter;Xia Xu;Peijian Cao;Wei Bai;Rajeshwari Ramanan;Fawn Amonpant;Loganathan Arul;Patrick E. Canlas;Randy Ruan;Chang-Jin Park;Xuewei Chen;Sohyun Hwang;Jong-Seong Jeon;Pamela C. Ronald Towards Establishment of a Rice Stress Response Interactome PLoS Genetics, 2011, 7(4): e1002020
|-
|''OsYUCCA5''
|[[Os12g0512000]]
|LOC_Os12g32750
|Yuko Yamamoto;Noriko Kamiya;Yoichi Morinaka;Makoto Matsuoka;Takashi Sazuka Auxin Biosynthesis by the YUCCA Genes in Rice Plant Physiology, 2007, 143(3): 1362-1371
|-
|''OsbHLH133''
|[[Os12g0508500]]
|LOC_Os12g32400
|Lu Wang;Yinghui Ying;Reena Narsai;Lingxiao Ye;Luqing Zheng;Jingluan Tian;James Whelan;Huixia Shou Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa Plant, Cell & Environment, 2013, 36(1): 224-236
|-
|''OsWRKY85''
|[[Os12g0507300]]
|LOC_Os12g32250
|Christian A. Ross;Yue Liu;Qingxi J. Shen The WRKY Gene Family in Rice (Oryza sativa) Journal of Integrative Plant Biology, 2007, 49(6): 827-842
|-
|''CycA21''
|[[Os12g0502300]]
|LOC_Os12g31810
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|}

RiceWiki:TBC

2017-03-07T02:04:02Z

Xysj2019:

To be curated 
'''Every Gene Has A Story ！'''
{|class="wikitable" style="width:90%;text-align:center"
|-
!Gene name
!RAP ID
!MSU ID
!Reference Title
|-
|''OsSOS1''
|[[Os12g0641100]]
|LOC_Os12g44360
|Huan Wang;Meishan Zhang;Rui Guo;Decheng Shi;Bao Liu;Xiuyun Lin;Chunwu Yan Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.)BMC Plant Biology, 2012, 12: 194
|-
|''OsCCD1''
|[[Os12g0640600]]
|LOC_Os12g44310
|Andrea Ilg;Qiuju Yu;Patrick Schaub;Peter Beyer;Salim Al-Babili Overexpression of the rice carotenoid cleavage dioxygenase 1 gene in Golden Rice endosperm suggests apocarotenoids as substrates in planta Planta, 2010, 232(3): 691-699
|-
|''OsPTR2''
|[[Os12g0638200]]
|LOC_Os12g44100
|Yuge Li;Jie Ouyang;Ya-Yun Wang;Rui Hu;Kuaifei Xia;Jun Duan;Yaqin Wang;Yi-Fang Tsay;Mingyong Zhang Disruption of the rice nitrate transporter OsNPF2.2 hinders root-to-shoot nitrate transport and vascular development Scientific Reports, 2015, 5: 9635
|-
|''Osgr-rbp4''
|[[Os12g0632000]]
|LOC_Os12g43600
|Chandan Sahi;Manu Agarwal;Amanjot Singha;Anil Grover Molecular characterization of a novel isoform of rice (Oryza sativa L.) glycine rich-RNA binding protein and evidence for its involvement in high temperature stress response Plant Science, 2007, 173(2): 144-155
|-
|''TOND1''
|[[Os12g0630100]]
|LOC_Os12g43440
|Yangjun Zhang;Lubin Tan;Zuofeng Zhu;Lixing Yuan;Daoxin Xie;Chuanqing Sun TOND1 confers tolerance to nitrogen deficiency in rice The Plant Journal, 2014,
|-
|''OsSpo11-4''
|[[Os12g0622500]]
|LOC_Os12g42760
|Yoshinori Shingu;Takeshi Tokai;Yasuo Agawa;Kentaro Toyota;Selina Ahamed;Makiko Kawagishi-Kobayashi;Akira Komatsu;Tsutomu Mikawa;Masa-Toshi Yamamoto;Kyo Wakasa;Takehiko Shibata;Kohji Kusano The double-stranded break-forming activity of plant SPO11s and a novel rice SPO11 revealed by a Drosophila bioassay BMC Microbiology, 2012, 13: 1
|-
|''OsYABBY6''
|[[Os12g0621100]]
|LOC_Os12g42610
|Taiyo Toriba;Kohsuke Harada;Atsushi Takamura;Hidemitsu Nakamura;Hiroaki Ichikawa;Takuya Suzaki;Hiro-Yuki Hirano Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1 Molecular Genetics and Genomics, 2007, 277(5): 457-468
|-
|''OsHAP2F''
|[[Os12g0618600]]
|LOC_Os12g42400
|Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
|-
|''OsPPKL3''
|[[Os12g0617900]]
|LOC_Os12g42310
| Xiaojun Zhang;Jianfei Wang;Ji Huang;Hongxia Lan;Cailin Wang;Congfei Yin;Yunyu Wu;Haijuan Tang;Qian Qian;Jiayang Li;Hongsheng Zhang Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice Proceedings of the National Academy of Sciences, 2012, 109(52): 21534-21539
|-
|''OsNCED5''
|[[Os12g0617400]]
|LOC_Os12g42280
|Guohui Zhu;Nenghui Ye;Jianhua Zhang Glucose-Induced Delay of Seed Germination in Rice is Mediated by the Suppression of ABA Catabolism Rather Than an Enhancement of ABA Biosynthesis Plant and Cell Physiology, 2009, 50(3): 644-651
|-
|''OsPCF8''
|[[Os12g0616400]]
|LOC_Os12g42190
|CHUNHUA YANG;DAYONG LI;DONGHAI MAO;XUE LIU;CHENGJUN JI;XIAOBING LI;XIANFENG ZHAO;ZHUKUAN CHENG;CAIYAN CHEN;LIHUANG ZHU Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.) Plant, Cell & Environment, 2013, 36(12): 2207-2218
|-
|''OsPID''
|[[Os12g0614600]]
|LOC_Os12g42020
|Yutaka Morita;Junko Kyozuka Characterization of OsPID, the Rice Ortholog of PINOID, and its Possible Involvement in the Control of Polar Auxin Transport Plant and Cell Physiology, 2007, 48(3): 540-549
|-
|''OsARF25''
|[[Os12g0613700]]
|LOC_Os12g41950
| YanHua Qi;SuiKang Wang;ChenJia Shen;SaiNa Zhang;Yue Chen;YanXia Xu;Yu Liu;YunRong Wu;DeAn Jiang OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa) New Phytologist, 2012, 193(1): 109-120
|-
|''OsTRBF2''
|[[Os12g0613300]]
|LOC_Os12g41920
| Mi Young Byun;Jong-Pil Hong;Woo Taek Kim Identification and characterization of three telomere repeat-binding factors in rice Biochemical and Biophysical Research Communications, 2008, 372(1): 85-90
|-
|''OsHAP2B''
|[[Os12g0613000]]
|LOC_Os12g41880
|Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
|-
|''OspPLAIIIζ''
|[[Os12g0611300]]
|LOC_Os12g41720
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OMTN3''
|[[Os12g0610600]]
|LOC_Os12g41680
|Yujie Fang;Kabin Xie;Lizhong Xiong Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice Journal of Experimental Botany, 2014, 65(8): 2119-2135
|-
|''OsCam3''
|[[Os12g0603800]]
|LOC_Os12g41110
|Aumnart Chinpongpanich;Nuchanat Wutipraditkul;Sarut Thairat;Teerapong Buaboocha Biophysical characterization of calmodulin and calmodulin-like proteins from rice, Oryza sativa L. Acta Biochimica et Biophysica Sinica, 2011, 43(11): 867-876
|-
|''OsbZIP88''
|[[Os12g0601800]]
|LOC_Os12g40920
|Qian Ji;Liang-sheng Zhang;Yi-fei Wang;Jian Wang Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa Journal of Shanghai University (English Edition), 2009, 13(2): 174-182
|-
|''OsWRKY83''
|[[Os12g0597700]]
|LOC_Os12g40570
|Christian A. Ross;Yue Liu;Qingxi J. Shen The WRKY Gene Family in Rice (Oryza sativa) Journal of Integrative Plant Biology, 2007, 49(6): 827-842
|-
|''OsUAH''
|[[Os12g0597500]]
|LOC_Os12g40550
|Juan Li;Rui-Ying Qin;Hao Li;Rong-Fang Xu;Ya-Chun Yang;Da-Hu Ni;Hui Ma;Li Li;Peng-Cheng Wei;Jian-Bo Yang Low-Temperature-Induced Expression of Rice Ureidoglycolate Amidohydrolase is Mediated by a C-Repeat/Dehydration Responsive Element that Specifically Interacts with Rice C-Repeat-Binding Factor 3 Frontiers in Plant Science, 2015, 6: 1011
|-
|''HSA1a''
|[[Os12g0589400]]
|LOC_Os12g39880
|Takahiko Kubo;Tomonori Takashi;Motoyuki Ashikari;Atsushi Yoshimura;Nori Kurata Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice Molecular Plant, 2016, 9(2): 221-232
|-
|''OsNAAT6''
|[[Os12g0588900]]
|LOC_Os12g39840
|Haruhiko Inoue;Michiko Takahashi;Takanori Kobayashi;Motofumi Suzuki;Hiromi Nakanishi;Satoshi Mori;Naoko K. Nishizawa Identification and localisation of the rice nicotianamine aminotransferase gene OsNAAT1 expression suggests the site of phytosiderophore synthesis in rice Plant Molecular Biology, 2008, 66(1-2): 193-203
|-
|''CycD5;2''
|[[Os12g0588800]]
|LOC_Os12g39830
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|-
|''OsSAPK9''
|[[Os12g0586100]]
|LOC_Os12g39630
|Mei-Rong Xu;Li-Yu Huang;Fan Zhang;Ling-Hua Zhu;Yong-Li Zhou;Zhi-Kang Li Genome-Wide Phylogenetic Analysis of Stress-Activated Protein Kinase Genes in Rice (OsSAPKs) and Expression Profiling in Response to Xanthomonas oryzae pv. oryzicola Infection Plant Molecular Biology Reporter, 2013, 31(4): 877-885
|-
|''ZFP252''
|[[Os12g0583700]]
|LOC_Os12g39400
|Dong-Qing Xu;Ji Huang;Shu-Qiao Guo;Xia Yang;Yong-Mei Bao;Hai-Juan Tang;Hong-Sheng Zhang Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.) FEBS Letters, 2008, 582(7): 1037-1043
|-
|''CycA3;2''
|[[Os12g0581800]]
|LOC_Os12g39210
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|-
|''ZOS12-7''
|[[Os12g0578800]]
|LOC_Os12g38960
|Duarte D. Figueiredo;Pedro M. Barros;André M. Cordeiro;Tânia S. Serra;Tiago Lourenço;Subhash Chander;M. Margarida Oliveira;Nelson J. M. Saibo Seven zinc-finger transcription factors are novel regulators of the stress responsive gene OsDREB1B Journal of Experimental Botany, 2012, 63(10): 3643-3656
|-
|''OsMYB91''
|[[Os12g0572000]]
|LOC_Os12g38400
| Ning Zhu;Saifeng Cheng;Xiaoyun Liu;Hao Du;Mingqiu Dai;Dao-Xiu Zhou;Wenjing Yang;Yu Zhao The R2R3-type MYB gene OsMYB91 has a function in coordinating plant growth and salt stress tolerance in rice Plant Science, 2015, 236: 146-156
|-
|''Spl11''
|[[Os12g0570000]]
|LOC_Os12g38210
|Jinling Liu;Chan Ho Park;Feng He;Minoru Nagano;Mo Wang;Maria Bellizzi;Kai Zhang;Xiaoshan Zeng;Wende Liu;Yuese Ning;Yoji Kawano;Guo-Liang Wang The RhoGAP SPIN6 Associates with SPL11 and OsRac1 and Negatively Regulates Programmed Cell Death and Innate Immunity in Rice PLoS Pathogens, 2015, 11(2): e1004629
|-
|''OsBOR1''
|[[Os12g0566000]]
|LOC_Os12g37840
|Yuko Nakagawa;Hideki Hanaoka;Masaharu Kobayashi;Kazumaru Miyoshi;Kyoko Miwa;Toru Fujiwara Cell-Type Specificity of the Expression of Os BOR1, a Rice Efflux Boron Transporter Gene, Is Regulated in Response to Boron Availability for Efficient Boron Uptake and Xylem Loading The Plant Cell, 2007, 19(8): 2624-2635
|-
|''OsOBF1''
|[[Os12g0560900]]
|LOC_Os12g37410
|Qian Ji;Liang-sheng Zhang;Yi-fei Wang;Jian Wang Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa Journal of Shanghai University (English Edition), 2009, 13(2): 174-182
|-
|''OsSar1b''
|[[Os12g0560300]]
|LOC_Os12g37360
|Lihong Tian;Ling Ling Dai;Zhi Jie Yin;Masako Fukuda;Toshihiro Kumamaru;Xiang Bai Dong;Xiu Ping Xu;Le Qing Qu Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm Journal of Experimental Botany, 2013, 64(10): 2831-2845
|-
|''OsLOX11''
|[[Os12g0559200]]
|LOC_Os12g37260
|Soma S. Marla;V. K. Singh LOX genes in blast fungus (Magnaporthe grisea) resistance in rice Functional & Integrative Genomics, 2012, 12(2): 265-275
|-
|''OsDi19-7''
|[[Os12g0556100]]
|LOC_Os12g36900
|Lili Wang;Changchun Yu;Cong Chen;Chunlan He;Yingguo Zhu;Wenchao Huang Identification of rice Di19 family reveals OsDi19-4 involved in drought resistance Plant Cell Reports, 2014, 33(12): 2047-2062
|-
|''OsPR10a''
|[[Os12g0555500]]
|LOC_Os12g36880
|Changhyun Choi;Seon-Hee Hwang;Il Ran Fang;Soon Il Kwon;Sang Ryeol Park;Ilpyung Ahn;Jung Bong Kim;Duk-Ju Hwang Molecular characterization of Oryza sativa WRKY6, which binds to W-box-like element 1 of the Oryza sativa pathogenesis-related (PR) 10a promoter and confers reduced susceptibility to pathogens New Phytologist, 2015, 208(3): 846-859
|-
|''OspPLAIIλ''
|[[Os12g0552200]]
|LOC_Os12g36610
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OspPLAIIκ''
|[[Os12g0551600]]
|LOC_Os12g36530
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OsNDPK2''
|[[Os12g0548300]]
|LOC_Os12g36194
|Song Mi Cho;Seo Ho Shin;Kwang Sang Kim;Young Cheol Kim;Moo Young Eun;Baik Ho Cho Enhanced Expression of a Gene Encoding a Nucleoside Diphosphate Kinase 1 (OsNDPK1) in Rice Plants upon Infection with Bacterial Pathogens Molecules and Cells, 2004, 18(3): 390-395
|-
|''pms3''
|[[Os12g0545900]]
|LOC_Os12g36030
|Hai Zhou;Qinjian Liu;Jing Li;Dagang Jiang;Lingyan Zhou;Ping Wu;Sen Lu;Feng Li;Liya Zhu;Zhenlan Liu;Letian Chen;Yao-Guang Liu;Chuxiong Zhuang Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA Cell Research, 2012, 22(4): 649-660
|-
|''Osrboh9''
|[[Os12g0541300]]
|LOC_Os12g35610
|Dongping Zhang;Li Chen;Dahong Li;Bing Lv;Yun Chen;Jingui Chen;XuejiaoYan;Jiansheng Liang OsRACK1 Is Involved in Abscisic Acid- and H2O2-Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.) PLoS ONE, 2014, 9(5): e97120
|-
|''OsGRX29''
|[[Os12g0538700]]
|LOC_Os12g35340
|Rohini Garg;Shalu Jhanwar;Akhilesh K. Tyagi;Mukesh Jain Genome-Wide Survey and Expression Analysis Suggest Diverse Roles of Glutaredoxin Gene Family Members During Development and Response to Various Stimuli in Rice DNA Research, 2010, 17(6): 353-367
|-
|''OsGRX28''
|[[Os12g0538600]]
|LOC_Os12g35330
|Rohini Garg;Shalu Jhanwar;Akhilesh K. Tyagi;Mukesh Jain Genome-Wide Survey and Expression Analysis Suggest Diverse Roles of Glutaredoxin Gene Family Members During Development and Response to Various Stimuli in Rice DNA Research, 2010, 17(6): 353-367
|-
|''OsVIL2''
|[[Os12g0533500]]
|LOC_Os12g34850
|Jungil Yang;Shinyong Lee;Runlai Hang;Sung-Ryul Kim;Yang-Seok Lee;Xiaofeng Cao;Richard Amasino;Gynheung An OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice The Plant Journal, 2013, 73(4): 566-578
|-
|''TAM1''
|[[Os12g0520200]]
|LOC_Os12g33610
|Bradley W. Tonnessen;Patricia Manosalva;Jillian M. Lang;Marietta Baraoidan;Alicia Bordeos;Ramil Mauleon;James Oard;Scot Hulbert;Hei Leung;Jan E. Leach Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance Plant Molecular Biology, 2015, 87(3): 273-286
|-
|''OsMYB46''
|[[Os12g0515300]]
|LOC_Os12g33070
|Ruiqin Zhong;Chanhui Lee;Ryan L. McCarthy;Cromwell K. Reeves;Evan G. Jones;Zheng-Hua Ye Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors Plant and Cell Physiology, 2011, 52(10): 1856-1871
|-
|''SAB23''
|[[Os12g0514400]]
|LOC_Os12g32980
|Young-Su Seo;Mawsheng Chern;Laura E. Bartley;Muho Han;Ki-Hong Jung;Insuk Lee;Harkamal Walia;Todd Richter;Xia Xu;Peijian Cao;Wei Bai;Rajeshwari Ramanan;Fawn Amonpant;Loganathan Arul;Patrick E. Canlas;Randy Ruan;Chang-Jin Park;Xuewei Chen;Sohyun Hwang;Jong-Seong Jeon;Pamela C. Ronald Towards Establishment of a Rice Stress Response Interactome PLoS Genetics, 2011, 7(4): e1002020
|-
|''OsYUCCA5''
|[[Os12g0512000]]
|LOC_Os12g32750
|Yuko Yamamoto;Noriko Kamiya;Yoichi Morinaka;Makoto Matsuoka;Takashi Sazuka Auxin Biosynthesis by the YUCCA Genes in Rice Plant Physiology, 2007, 143(3): 1362-1371
|-
|''OsbHLH133''
|[[Os12g0508500]]
|LOC_Os12g32400
|Lu Wang;Yinghui Ying;Reena Narsai;Lingxiao Ye;Luqing Zheng;Jingluan Tian;James Whelan;Huixia Shou Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa Plant, Cell & Environment, 2013, 36(1): 224-236
|-
|''OsWRKY85''
|[[Os12g0507300]]
|LOC_Os12g32250
|Christian A. Ross;Yue Liu;Qingxi J. Shen The WRKY Gene Family in Rice (Oryza sativa) Journal of Integrative Plant Biology, 2007, 49(6): 827-842
|-
|''CycA21''
|[[Os12g0502300]]
|LOC_Os12g31810
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|}

Os12g0570000

2017-03-07T02:03:38Z

Xysj2019: /* Labs working on this gene */

The rice gene Os12g0570000 was reported as '''''SPL11''''' in 2008<ref name="ref1" /> by researchers from Columbus, Philippines and China.

==Annotated Information==
===Gene Symbol===
*'''''Os12g0570000 <=> SPL11,OsSPL11

===Function===
* The rice (Oryza sativa) E3 ligase '''''SPOTTED LEAF11 (SPL11)''''' negatively regulates programmed cell death and disease resistance.
* SPL11 also regulates flowering via interaction with SPIN1 (for SPL11-interacting protein1), a Signal Transduction and Activation of RNA family member. SPIN1 binds RNA and DNA in vitro and interacts with SPL11 in the nucleus.
===Mutation===
* '''''Spl11''''' mutants have delayed flowering under long-day conditions.
===Expression ===

===Evolution===

You can also add sub-section(s) at will.
==Labs working on this gene==
* Department of Plant Pathology, Plant Molecular Biology and Biotechnology Program, Ohio State University, Columbus, Ohio 43210
* International Rice Research Institute, Manila, Philippines
* Crop Gene Engineering Key Laboratory of Hunan Province, Hunan Agricultural University, Changsha, Hunan 410128, China

==References==
<references>
* <ref name="ref1">
Vega-Sánchez ME, Zeng L, Chen S, Leung H, Wang GL. SPIN1, a K homology domain
protein negatively regulated and ubiquitinated by the E3 ubiquitin ligase SPL11,
is involved in flowering time control in rice. Plant Cell. 2008
Jun;20(6):1456-69. doi: 10.1105/tpc.108.058610. PubMed PMID: 18586868; PubMed
Central PMCID: PMC2483366.

</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

Os12g0597000

2017-03-07T02:02:08Z

Xysj2019:

CBL proteins are calcium-binding proteins that are thought to function as plant signal transduction elements. Only one rice CBL gene, OsCBL2, is up-regulated by GA in the aleurone layer.
==Annotated Information==
===Function===
[[File:Table1.jpg|left|thumb|200px|'''Table1''' Amino acid similarity and identity of rice CBLs (OsCBL1–10) and Arabidopsis CBLs (AtCBL1–10). For each pairwise comparison, similarity values are followed by identity values in parentheses.(from reference<ref name="ref1" />)]]
[[File:图片1.png|left|thumb|200px|'''Figure 1''' Yeast two-hybrid analysis demonstrates an interaction between OsCBLs and AtCIPKs. OsCBLs and AtCIPKs were translationally fused to the GAL4 DNA-binding domain (BD) and activation domain (AD) as indicated. Nutritional reporter systems minus Leu plus Trp (−LT) and minus Leu, Trp, and His (−LHT) and filter-lift GAL assays were employed to examine the interaction between OsCBLs and AtCIPKs (A). A positive control showing the interaction of AtCBL1 with AtCIPK1 is shown in B.(from reference<ref name="ref1" />)]]
[[File:图片2.png|right|thumb|200px|'''Figure 2''' OsCBL2 to 4 are localized to membranes. OsCBL1 to 4 were translationally fused to GFP and transiently expressed in barley aleurone protoplasts. The figure shows representative epifluorescence images (top) and bright-field images (bottom) of single, transformed cells. The unmagnified width of each image is approximately 40 μm.(from reference<ref name="ref1" />)]]
[[File:图片970009-3.png|left|thumb|200px|'''Figure 3''' Antisense OsCBL2 or HvCBL2delays the GA-induced vacuolation of barley aleurone protoplasts. Barley protoplasts were cotransfected with GFP andAsOsCBL2, GFP, andAsHvCBL2, or with GFP and empty cassette (pLZUbi) using the constructs diagrammed in A. The extent of vacuolation for individual protoplasts was scored using the five categories indicated in B. Vacuoles are seen as dark regions surrounded by bright regions of cytoplasm. The number of protoplasts in each category 48 h after transfection and 42 h after treatment with GA are shown in C forAsOsCBL2 and in D for AsHvCBL2.(from reference<ref name="ref1" />)]]
[[File:图片10-4.gif|right|thumb|200px|'''Figure 4''' Antisense OsCBL2 does not delay GA-induced transcription of GUS from anα-amylase promoter in rice half-grain. A diagram of the constructs introduced by particle bombardment is shown in A. Transcription of GUS from a GA-regulated α-amylase promoter was measured relative to expression of LUX (GUS:LUX ratio) driven by a constitutive ubiquitin promoter (B). Half-grains were incubated for 24 h without hormone (−GA) or with GA and the ratio of GUS-to-LUX expression determined in the presence and absence of the antisense construct.(from reference<ref name="ref1" />)]]
Many developmental and environmental signals are transduced through changes in intracellular calcium concentrations. Calcineurin B-like (CBL) proteins are calcium-binding proteins that are thought to function as plant signal transduction elements. RNA profiling using a rice (Oryza sativa cv Nipponbare) oligonucleotide microarray was used to monitor gene expression in de-embryonated rice grains. This analysis showed that a putative rice CBL gene responded to gibberellic acid, but not abscisic acid, treatment. The CBL gene family in rice contains at least 10 genes and these have extensive similarity to the CBLs of Arabidopsis (Arabidopsis thaliana). In yeast (Saccharomyces cerevisiae) two-hybrid assays, rice CBLs interact with the kinase partners of Arabidopsis CBLs. Only one rice CBL gene, OsCBL2, is up-regulated by GA in the aleurone layer.<ref name="ref1" />

'''OsCBLs Interact with AtCIPKs'''

We used the yeast two-hybrid system to demonstrate that rice CBLs interact with AtCIPKs. OsCBL1 to 4 were fused to the binding domain of GAL4, whereasAtCIPK1, 6, and 8 were fused to the activation domain of GAL4. Figure 1A shows the growth of yeast on selection medium and the corresponding assay for β-galactosidase when these different OsCBLs and AtCIPKs were used as bait and prey. As expected, the positive control showed interaction between AtCBL1 and AtCIPK1 (Fig. 1B)<ref name="ref2" />. OsCBL2, which has 74% amino acid similarity with AtCBL1 (Table I), also had a strong interaction with AtCIPK1. Like AtCBL1<ref name="ref3" />, OsCBL2 interacted strongly with AtCIPK8 and weakly with AtCIPK6. OsCBL4 also interacted strongly with AtCIPK1 and 8, but unlike OsCBL2, it did not interact with AtCIPK6. OsCBL1 and 3 both interacted with all three of the Arabidopsis CIPKs examined. These data provide evidence that OsCBL1 to 4 proteins are functional homologs of Arabidopsis CBL proteins.

Specificity for rice CBL function is likely to arise from differences in intracellular localization and different timing of expression. We show here that OsCBL2 and 3are targeted to the TN, and OsCBL4 to the PM (Fig. 2). Even though both OsCBL2 and 3 are targeted to the TN, their roles may be distinguished by the timing of their expression. For example, OsCBL2 is expressed in aleurone during germination, but OsCBL3 was not detectable in this tissue under the conditions that we have tested. OsCBL2 may be involved in vacuole function since transformation of aleurone protoplasts with an antisense construct of OsCBL2 orHvCBL2 slowed the rate of GA-induced vacuolation (Fig. 3), but not GA-induced transcription of an α-amylase reporter construct (Fig. 4).

===Expression===
OsCBL2 high expression in booting culms, young spikes, seedling roots and shoots. Expression of OsCBL2 is not induced by salt, drought, cold or ABA treatment. Although both OsCBL1 and 2 were expressed in rice half-grains, OsCBL2 was specifically up-regulated by GA (Fig. 5). GeneChip and RNA blotting experiments showed that OsCBL2 was most strongly expressed in aleurone and root and, using an expression intensity value of 50 as a cutoff, it is clear thatOsCBL2 is expressed in most tissues of the rice plant.

In aleurone cells, GA stimulates the synthesis and secretion of hydrolytic enzymes including α-amylase, promotes the vacuolation of the aleurone protoplast, and initiates programmed cell death. All of these processes require an increase in [Ca2+]cyt. Here we show that the expression of one gene in the rice CBL family is up-regulated in aleurone by GA, but not by ABA. We show that other rice CBLs are not differentially expressed by GA and ABA in aleurone or in vegetative tissues of the shoot or root. We present data showing that OsCBL2 is localized to the aleurone tonoplast (TN), and transient expression assays with rice and barley CBLs in barley aleurone cells indicate that they are likely to be involved in a GA-signaling pathway that leads to the vacuolation of the aleurone cell.<ref name="ref1" />

'''Hormone and Tissue-Specific Expression of OsCBLs'''

Only OsCBL2 contains the probe sequences found on the rice GeneChip microarray. It is therefore highly likely that the GA-regulated CBL identified in our microarray experiments (Fig. 6) is OsCBL2. We used the GeneChip microarray to quantitate the expression of OsCBL2 in the tissues of rice cv Nipponbare at all stages of development. These data are presented in Figure 7, where GeneChip intensity values for each tissue or organ are plotted with higher values farther from the center of the figure. OsCBL2 is expressed at high levels in roots of seedlings and tillering plants, during early stages of panicle and seed formation, and in the aleurone of mature grain. Expression of OsCBL2 was lowest in mature leaves and stems and in the emerging inflorescence shoot (Fig. 7).

To investigate the expression of OsCBLs in germinating Nipponbare rice seedling tissues, RNA was isolated from scutellum, shoots, and roots of 7-d-old seedlings and northern blots were hybridized with gene-specific probes for OsCBL1 to 3(Fig. 8). OsCBL2 is expressed in all rice seedling tissues and this confirmed the analysis made with the GeneChip array (Fig. 7). RNA blotting also confirmed thatOsCBL2 mRNA was abundant in roots relative to shoots and scutella, whereas theOsCBL1 transcript was more abundant in shoots than in roots and the OsCBL3transcript was abundant in both root and shoot tissue (Fig. 8). OsCBL4 and 7 were not expressed strongly enough in tissues of 7-d-old seedlings to be detected.<ref name="ref1" />

'''GA-Induced Expression of OsCBL2 Is Reduced in the Aleurone Layer of dwarf1 Mutant Rice'''

We also used RNA profiling and northern blotting to see whether GA-induced expression of OsCBL2 in aleurone cells was dependent on a signaling pathway that utilizes heterotrimeric G-proteins. For these experiments, RNA was isolated from half-grains of wild-type and dwarf1 (d1) mutant rice. The d1 rice mutant lacks the α-subunit of heterotrimeric G-proteins and shows a defective GA response, except at high GA concentrations<ref name="ref4" />. In the experiment shown in Figure 9A, there was a 3-fold increase in OsCBL2 expression in wild-type rice aleurone after 8-h incubation at a high (5 μM) GA concentration. When wild-type half-grains were incubated with a low (100 nM) GA concentration,OSCBL2 expression was still almost twice as high as that at time zero (Fig. 9A). Expression of OsCBL2 in d1 half-grains, however, was much reduced at 5 μM GA compared to wild type, and transcript abundance was virtually unchanged following 8-h incubation with 100 nM GA (Fig. 9A). Similar changes in expression were observed for α-amylase in d1 and wild-type rice half-grains (Fig. 9B). Thus, there was virtually no change in the expression of the RAmy1A gene at low GA concentrations in d1 rice, whereas in wild-type rice grain low GA brought about a large change in RAmy1A expression (Fig. 9B). RNA blotting was used to confirm the microarray data on CBL expression as shown in Figure 9C. Expression ofOsCBL2 was observed in wild-type aleurone and the d1 mutant at 5 μM GA, butOsCBL2 transcript could not be detected in the d1 mutant at 100 nM GA.<ref name="ref1" />

===Mutation===
The amount of OsCBL2 transcript was increased specifically by GA treatment in rice aleurone (Figs.5,6, and 9). Using microarray analyses and RNA blots, we show that the up-regulation ofOsCBL2 expression occurs within 3 h of GA treatment and persists for at least 48 h (Figs.5,6, and 9). Data from experiments with the d1 mutant of rice strongly suggest that OsCBL2 transcription is part of a GA-signaling pathway that involves the α-subunit of heterotrimeric G-proteins (Fig. 9).

OsCBL2 expression in aleurone is specifically up-regulated by GA (Figs. 5 and 6). Transcript abundance was unchanged when rice half-grains were incubated with ABA or no hormone, or when seedlings were exposed to various stresses. Perhaps more interesting is our observation that correct expression of OsCBL2 in aleurone protoplasts seems to be required for proper vacuolation (Fig. 3). When barley aleurone protoplasts were transiently transformed with antisense constructs forOsCBL2 or HvCBL2 (Fig. 3, C and D), vacuolation was retarded. This was a specific effect in that AsOsCBL2 did not inhibit transcription from an α-amylase promoter (Fig. 4). One interpretation of these data is that OsCBL2 interacts with one or more proteins in aleurone cells, and that an insufficient amount of OsCBL2 leads to a defect in vacuole function. For example, OsCBL2 may activate a CIPK and the OsCBL2/CIPK complex may promote vacuole fusion and enlargement. AntisenseOsCBL2 would reduce the amount of OsCBL2 and prevent the formation of the active OsCBL/CIPK complex. This speculation is consistent with our previous data showing that a Ser/Thr protein kinase present on the TN in barley aleurone protoplasts is involved in the gating of a Ca2+-regulated ion channel<ref name="ref5" />.

===Knowledge Extension===
A homolog with 91% sequence identity to OsCBL2 was cloned from barley (Hordeum vulgare cv Himalaya), and designated HvCBL2. We examined the localization and function of OsCBL2 and HvCBL2 in rice and barley aleurone because changes in cytosolic calcium have been implicated in the response of the aleurone cell to GA. Green fluorescent protein translational fusions of OsCBL2 and OsCBL3 were localized to the tonoplast of aleurone cell protein storage vacuoles and OsCBL4-green fluorescent protein was localized to the plasma membrane. Data from experiments using antisense expression of OsCBL2 and HvCBL2 are consistent with a role for OsCBL2 in promoting vacuolation of barley aleurone cells following treatment with GA.<ref name="ref1" />

Calcium-binding proteins with similarity to calcineurin B have been cloned recently from plants <ref name="ref6" />. These calcineurin B-like proteins (CBLs) contain calcium-binding EF hands and are similar to the regulatory B-subunit of calcineurin and to the neuronal calcium sensor <ref name="ref7" />. CBLs, therefore, have the potential to transduce [Ca2+]cyt signals and are thought to play roles in stress and hormone signaling in plants <ref name="ref8" />. The first CBL gene to be cloned was a salt overly sensitive (SOS) gene from Arabidopsis (Arabidopsis thaliana) that was designatedSOS3 . SOS3 is identical to AtCLB4, a salt-responsive CBL gene cloned independently from Arabidopsis <ref name="ref9" />. At least 10 expressed CBL genes and proteins from Arabidopsis have now been identified, and many CBL genes are present in the sequenced rice (Oryza sativa) genome<ref name="ref10" />.

==Labs working on this gene==
Department of Plant and Microbial Biology, University of California, Berkeley, California 94720–3102 (Y.-s.H., P.C.B., Y.H.C., R.L.J.); and Torrey Mesa Research Institute, Syngenta Research and Technology, San Diego, California 92121 (H.-S.C., T.Z.);
State key lab of crop genetics and germplasm enhancement, Nanjing Agricultural University, Nanjing, 210095, PR China; College of Chemistry and Life Science, Zhejiang Normal University, Jinhua, 321004, PR China

==References==
<references>
<ref name="ref1"> Hwang Y S, Bethke P C, Cheong Y H, Chang H S, Zhu T, Jones R L. A gibberellin-regulated calcineurin B in rice localizes to the tonoplast and is implicated in vacuole function[J]. Plant Physiol, 2005, 138: 1347-1358</ref>
<ref name="ref2"> Kim KN, Cheong YH, Gupta R, Luan S (2000) Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Plant Physiol 124: 1844–1853</ref>
<ref name="ref3">Kolukisaoglu U, Weinl S, Blazevic D, Batistic O, Kudla J (2004) Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol 134: 43–58</ref>
<ref name="ref4">Ueguchi-Tanaka M, Fujisawa Y, Kobayashi M, Ashikari M, Iwasaki Y, Kitano H, Matsuoka M (2000) Rice dwarf mutant d1, which is defective in the alpha subunit of the heterotrimeric G protein, affects gibberellin signal transduction. Proc Natl Acad Sci USA 97: 11638–11643 </ref>
<ref name="ref5">Bethke PC, Jones RL (1997) Reversible protein phosphorylation regulates the activity of the slow-vacuolar ion channel. Plant J 11: 1227–1235</ref>
<ref name="ref6">Shi JR, Kim KN, Ritz O, Albrecht V, Gupta R, Harter K, Luan S, Kudla J (1999) Novel protein kinases associated with calcineurin B-like calcium sensors in Arabidopsis. Plant Cell 11: 2393–2405</ref>
<ref name="ref7">Liu J, Zhu J-K (1998) A calcium sensor homolog required for plant salt tolerance. Science 280: 1943–1945</ref>
<ref name="ref8">Luan S, Kudla J, Rodriguez-Concepcion M, Yalovsky S, Gruissem W(2002) Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. Plant Cell (Suppl) 14: S389–S400</ref>
<ref name="ref9">Kim KN, Cheong YH, Gupta R, Luan S (2000) Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Plant Physiol 124: 1844–1853</ref>
<ref name="ref10">Kolukisaoglu U, Weinl S, Blazevic D, Batistic O, Kudla J (2004) Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol 134: 43–58</ref>
</references>

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

==Structured Information==

Os12g0597000

2017-03-07T02:01:42Z

Xysj2019:

CBL proteins are calcium-binding proteins that are thought to function as plant signal transduction elements. Only one rice CBL gene, OsCBL2, is up-regulated by GA in the aleurone layer.
==Annotated Information==
===Function===
[[File:Table1.jpg|left|thumb|200px|'''Table1''' Amino acid similarity and identity of rice CBLs (OsCBL1–10) and Arabidopsis CBLs (AtCBL1–10). For each pairwise comparison, similarity values are followed by identity values in parentheses.(from reference<ref name="ref1" />)]]
[[File:图片1.png|left|thumb|200px|'''Figure 1''' Yeast two-hybrid analysis demonstrates an interaction between OsCBLs and AtCIPKs. OsCBLs and AtCIPKs were translationally fused to the GAL4 DNA-binding domain (BD) and activation domain (AD) as indicated. Nutritional reporter systems minus Leu plus Trp (−LT) and minus Leu, Trp, and His (−LHT) and filter-lift GAL assays were employed to examine the interaction between OsCBLs and AtCIPKs (A). A positive control showing the interaction of AtCBL1 with AtCIPK1 is shown in B.(from reference<ref name="ref1" />)]]
[[File:图片2.png|right|thumb|200px|'''Figure 2''' OsCBL2 to 4 are localized to membranes. OsCBL1 to 4 were translationally fused to GFP and transiently expressed in barley aleurone protoplasts. The figure shows representative epifluorescence images (top) and bright-field images (bottom) of single, transformed cells. The unmagnified width of each image is approximately 40 μm.(from reference<ref name="ref1" />)]]
[[File:图片970009-3.png|left|thumb|200px|'''Figure 3''' Antisense OsCBL2 or HvCBL2delays the GA-induced vacuolation of barley aleurone protoplasts. Barley protoplasts were cotransfected with GFP andAsOsCBL2, GFP, andAsHvCBL2, or with GFP and empty cassette (pLZUbi) using the constructs diagrammed in A. The extent of vacuolation for individual protoplasts was scored using the five categories indicated in B. Vacuoles are seen as dark regions surrounded by bright regions of cytoplasm. The number of protoplasts in each category 48 h after transfection and 42 h after treatment with GA are shown in C forAsOsCBL2 and in D for AsHvCBL2.(from reference<ref name="ref1" />)]]
[[File:图片10-4.gif|right|thumb|200px|'''Figure 4''' Antisense OsCBL2 does not delay GA-induced transcription of GUS from anα-amylase promoter in rice half-grain. A diagram of the constructs introduced by particle bombardment is shown in A. Transcription of GUS from a GA-regulated α-amylase promoter was measured relative to expression of LUX (GUS:LUX ratio) driven by a constitutive ubiquitin promoter (B). Half-grains were incubated for 24 h without hormone (−GA) or with GA and the ratio of GUS-to-LUX expression determined in the presence and absence of the antisense construct.(from reference<ref name="ref1" />)]]
Many developmental and environmental signals are transduced through changes in intracellular calcium concentrations. Calcineurin B-like (CBL) proteins are calcium-binding proteins that are thought to function as plant signal transduction elements. RNA profiling using a rice (Oryza sativa cv Nipponbare) oligonucleotide microarray was used to monitor gene expression in de-embryonated rice grains. This analysis showed that a putative rice CBL gene responded to gibberellic acid, but not abscisic acid, treatment. The CBL gene family in rice contains at least 10 genes and these have extensive similarity to the CBLs of Arabidopsis (Arabidopsis thaliana). In yeast (Saccharomyces cerevisiae) two-hybrid assays, rice CBLs interact with the kinase partners of Arabidopsis CBLs. Only one rice CBL gene, OsCBL2, is up-regulated by GA in the aleurone layer.<ref name="ref1" />

'''OsCBLs Interact with AtCIPKs'''

We used the yeast two-hybrid system to demonstrate that rice CBLs interact with AtCIPKs. OsCBL1 to 4 were fused to the binding domain of GAL4, whereasAtCIPK1, 6, and 8 were fused to the activation domain of GAL4. Figure 1A shows the growth of yeast on selection medium and the corresponding assay for β-galactosidase when these different OsCBLs and AtCIPKs were used as bait and prey. As expected, the positive control showed interaction between AtCBL1 and AtCIPK1 (Fig. 1B)<ref name="ref2" />. OsCBL2, which has 74% amino acid similarity with AtCBL1 (Table I), also had a strong interaction with AtCIPK1. Like AtCBL1<ref name="ref3" />, OsCBL2 interacted strongly with AtCIPK8 and weakly with AtCIPK6. OsCBL4 also interacted strongly with AtCIPK1 and 8, but unlike OsCBL2, it did not interact with AtCIPK6. OsCBL1 and 3 both interacted with all three of the Arabidopsis CIPKs examined. These data provide evidence that OsCBL1 to 4 proteins are functional homologs of Arabidopsis CBL proteins.

Specificity for rice CBL function is likely to arise from differences in intracellular localization and different timing of expression. We show here that OsCBL2 and 3are targeted to the TN, and OsCBL4 to the PM (Fig. 2). Even though both OsCBL2 and 3 are targeted to the TN, their roles may be distinguished by the timing of their expression. For example, OsCBL2 is expressed in aleurone during germination, but OsCBL3 was not detectable in this tissue under the conditions that we have tested. OsCBL2 may be involved in vacuole function since transformation of aleurone protoplasts with an antisense construct of OsCBL2 orHvCBL2 slowed the rate of GA-induced vacuolation (Fig. 3), but not GA-induced transcription of an α-amylase reporter construct (Fig. 4).

===Expression===
[[File:图片4-5.png|left|thumb|200px|'''Figure 5''' OsCBL2 but not OsCBL1shows GA-specific up-regulation in embryoless rice half-grains. Total RNA was isolated from grains treated with ABA or GA (A) or no hormone (B) for the indicated times. Note that changes in mRNA abundance reflect changes occurring in the aleurone layer.(from reference<ref name="ref1" />)]]
[[File:图片1-6.png|right|thumb|200px|'''Figure 6''' The rice calcineurin B-like gene OsCBL2 is up-regulated by GA treatment of rice aleurone layers. Transcript abundance of OsCBL2 (black circles) and actin (white circles) as measured by hybridization to a rice oligonucleotide chip (A). Total RNA was extracted from embryoless rice half-grains treated with GA, ABA, or no hormone for the indicated time. Expression of GA-induced α-amylase, RAmy1A (B), and ABA-induced dehydrin (C) genes in the same chip experiment are shown for comparison.(from reference<ref name="ref1" />)]]

OsCBL2 high expression in booting culms, young spikes, seedling roots and shoots. Expression of OsCBL2 is not induced by salt, drought, cold or ABA treatment. Although both OsCBL1 and 2 were expressed in rice half-grains, OsCBL2 was specifically up-regulated by GA (Fig. 5). GeneChip and RNA blotting experiments showed that OsCBL2 was most strongly expressed in aleurone and root and, using an expression intensity value of 50 as a cutoff, it is clear thatOsCBL2 is expressed in most tissues of the rice plant.

In aleurone cells, GA stimulates the synthesis and secretion of hydrolytic enzymes including α-amylase, promotes the vacuolation of the aleurone protoplast, and initiates programmed cell death. All of these processes require an increase in [Ca2+]cyt. Here we show that the expression of one gene in the rice CBL family is up-regulated in aleurone by GA, but not by ABA. We show that other rice CBLs are not differentially expressed by GA and ABA in aleurone or in vegetative tissues of the shoot or root. We present data showing that OsCBL2 is localized to the aleurone tonoplast (TN), and transient expression assays with rice and barley CBLs in barley aleurone cells indicate that they are likely to be involved in a GA-signaling pathway that leads to the vacuolation of the aleurone cell.<ref name="ref1" />

'''Hormone and Tissue-Specific Expression of OsCBLs'''

Only OsCBL2 contains the probe sequences found on the rice GeneChip microarray. It is therefore highly likely that the GA-regulated CBL identified in our microarray experiments (Fig. 6) is OsCBL2. We used the GeneChip microarray to quantitate the expression of OsCBL2 in the tissues of rice cv Nipponbare at all stages of development. These data are presented in Figure 7, where GeneChip intensity values for each tissue or organ are plotted with higher values farther from the center of the figure. OsCBL2 is expressed at high levels in roots of seedlings and tillering plants, during early stages of panicle and seed formation, and in the aleurone of mature grain. Expression of OsCBL2 was lowest in mature leaves and stems and in the emerging inflorescence shoot (Fig. 7).

To investigate the expression of OsCBLs in germinating Nipponbare rice seedling tissues, RNA was isolated from scutellum, shoots, and roots of 7-d-old seedlings and northern blots were hybridized with gene-specific probes for OsCBL1 to 3(Fig. 8). OsCBL2 is expressed in all rice seedling tissues and this confirmed the analysis made with the GeneChip array (Fig. 7). RNA blotting also confirmed thatOsCBL2 mRNA was abundant in roots relative to shoots and scutella, whereas theOsCBL1 transcript was more abundant in shoots than in roots and the OsCBL3transcript was abundant in both root and shoot tissue (Fig. 8). OsCBL4 and 7 were not expressed strongly enough in tissues of 7-d-old seedlings to be detected.<ref name="ref1" />

'''GA-Induced Expression of OsCBL2 Is Reduced in the Aleurone Layer of dwarf1 Mutant Rice'''

We also used RNA profiling and northern blotting to see whether GA-induced expression of OsCBL2 in aleurone cells was dependent on a signaling pathway that utilizes heterotrimeric G-proteins. For these experiments, RNA was isolated from half-grains of wild-type and dwarf1 (d1) mutant rice. The d1 rice mutant lacks the α-subunit of heterotrimeric G-proteins and shows a defective GA response, except at high GA concentrations<ref name="ref4" />. In the experiment shown in Figure 9A, there was a 3-fold increase in OsCBL2 expression in wild-type rice aleurone after 8-h incubation at a high (5 μM) GA concentration. When wild-type half-grains were incubated with a low (100 nM) GA concentration,OSCBL2 expression was still almost twice as high as that at time zero (Fig. 9A). Expression of OsCBL2 in d1 half-grains, however, was much reduced at 5 μM GA compared to wild type, and transcript abundance was virtually unchanged following 8-h incubation with 100 nM GA (Fig. 9A). Similar changes in expression were observed for α-amylase in d1 and wild-type rice half-grains (Fig. 9B). Thus, there was virtually no change in the expression of the RAmy1A gene at low GA concentrations in d1 rice, whereas in wild-type rice grain low GA brought about a large change in RAmy1A expression (Fig. 9B). RNA blotting was used to confirm the microarray data on CBL expression as shown in Figure 9C. Expression ofOsCBL2 was observed in wild-type aleurone and the d1 mutant at 5 μM GA, butOsCBL2 transcript could not be detected in the d1 mutant at 100 nM GA.<ref name="ref1" />

===Mutation===
The amount of OsCBL2 transcript was increased specifically by GA treatment in rice aleurone (Figs.5,6, and 9). Using microarray analyses and RNA blots, we show that the up-regulation ofOsCBL2 expression occurs within 3 h of GA treatment and persists for at least 48 h (Figs.5,6, and 9). Data from experiments with the d1 mutant of rice strongly suggest that OsCBL2 transcription is part of a GA-signaling pathway that involves the α-subunit of heterotrimeric G-proteins (Fig. 9).

OsCBL2 expression in aleurone is specifically up-regulated by GA (Figs. 5 and 6). Transcript abundance was unchanged when rice half-grains were incubated with ABA or no hormone, or when seedlings were exposed to various stresses. Perhaps more interesting is our observation that correct expression of OsCBL2 in aleurone protoplasts seems to be required for proper vacuolation (Fig. 3). When barley aleurone protoplasts were transiently transformed with antisense constructs forOsCBL2 or HvCBL2 (Fig. 3, C and D), vacuolation was retarded. This was a specific effect in that AsOsCBL2 did not inhibit transcription from an α-amylase promoter (Fig. 4). One interpretation of these data is that OsCBL2 interacts with one or more proteins in aleurone cells, and that an insufficient amount of OsCBL2 leads to a defect in vacuole function. For example, OsCBL2 may activate a CIPK and the OsCBL2/CIPK complex may promote vacuole fusion and enlargement. AntisenseOsCBL2 would reduce the amount of OsCBL2 and prevent the formation of the active OsCBL/CIPK complex. This speculation is consistent with our previous data showing that a Ser/Thr protein kinase present on the TN in barley aleurone protoplasts is involved in the gating of a Ca2+-regulated ion channel<ref name="ref5" />.

===Knowledge Extension===
A homolog with 91% sequence identity to OsCBL2 was cloned from barley (Hordeum vulgare cv Himalaya), and designated HvCBL2. We examined the localization and function of OsCBL2 and HvCBL2 in rice and barley aleurone because changes in cytosolic calcium have been implicated in the response of the aleurone cell to GA. Green fluorescent protein translational fusions of OsCBL2 and OsCBL3 were localized to the tonoplast of aleurone cell protein storage vacuoles and OsCBL4-green fluorescent protein was localized to the plasma membrane. Data from experiments using antisense expression of OsCBL2 and HvCBL2 are consistent with a role for OsCBL2 in promoting vacuolation of barley aleurone cells following treatment with GA.<ref name="ref1" />

Calcium-binding proteins with similarity to calcineurin B have been cloned recently from plants <ref name="ref6" />. These calcineurin B-like proteins (CBLs) contain calcium-binding EF hands and are similar to the regulatory B-subunit of calcineurin and to the neuronal calcium sensor <ref name="ref7" />. CBLs, therefore, have the potential to transduce [Ca2+]cyt signals and are thought to play roles in stress and hormone signaling in plants <ref name="ref8" />. The first CBL gene to be cloned was a salt overly sensitive (SOS) gene from Arabidopsis (Arabidopsis thaliana) that was designatedSOS3 . SOS3 is identical to AtCLB4, a salt-responsive CBL gene cloned independently from Arabidopsis <ref name="ref9" />. At least 10 expressed CBL genes and proteins from Arabidopsis have now been identified, and many CBL genes are present in the sequenced rice (Oryza sativa) genome<ref name="ref10" />.

==Labs working on this gene==
Department of Plant and Microbial Biology, University of California, Berkeley, California 94720–3102 (Y.-s.H., P.C.B., Y.H.C., R.L.J.); and Torrey Mesa Research Institute, Syngenta Research and Technology, San Diego, California 92121 (H.-S.C., T.Z.);
State key lab of crop genetics and germplasm enhancement, Nanjing Agricultural University, Nanjing, 210095, PR China; College of Chemistry and Life Science, Zhejiang Normal University, Jinhua, 321004, PR China

==References==
<references>
<ref name="ref1"> Hwang Y S, Bethke P C, Cheong Y H, Chang H S, Zhu T, Jones R L. A gibberellin-regulated calcineurin B in rice localizes to the tonoplast and is implicated in vacuole function[J]. Plant Physiol, 2005, 138: 1347-1358</ref>
<ref name="ref2"> Kim KN, Cheong YH, Gupta R, Luan S (2000) Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Plant Physiol 124: 1844–1853</ref>
<ref name="ref3">Kolukisaoglu U, Weinl S, Blazevic D, Batistic O, Kudla J (2004) Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol 134: 43–58</ref>
<ref name="ref4">Ueguchi-Tanaka M, Fujisawa Y, Kobayashi M, Ashikari M, Iwasaki Y, Kitano H, Matsuoka M (2000) Rice dwarf mutant d1, which is defective in the alpha subunit of the heterotrimeric G protein, affects gibberellin signal transduction. Proc Natl Acad Sci USA 97: 11638–11643 </ref>
<ref name="ref5">Bethke PC, Jones RL (1997) Reversible protein phosphorylation regulates the activity of the slow-vacuolar ion channel. Plant J 11: 1227–1235</ref>
<ref name="ref6">Shi JR, Kim KN, Ritz O, Albrecht V, Gupta R, Harter K, Luan S, Kudla J (1999) Novel protein kinases associated with calcineurin B-like calcium sensors in Arabidopsis. Plant Cell 11: 2393–2405</ref>
<ref name="ref7">Liu J, Zhu J-K (1998) A calcium sensor homolog required for plant salt tolerance. Science 280: 1943–1945</ref>
<ref name="ref8">Luan S, Kudla J, Rodriguez-Concepcion M, Yalovsky S, Gruissem W(2002) Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. Plant Cell (Suppl) 14: S389–S400</ref>
<ref name="ref9">Kim KN, Cheong YH, Gupta R, Luan S (2000) Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Plant Physiol 124: 1844–1853</ref>
<ref name="ref10">Kolukisaoglu U, Weinl S, Blazevic D, Batistic O, Kudla J (2004) Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol 134: 43–58</ref>
</references>

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

==Structured Information==

Os12g0597000

2017-03-07T02:01:12Z

Xysj2019:

CBL proteins are calcium-binding proteins that are thought to function as plant signal transduction elements. Only one rice CBL gene, OsCBL2, is up-regulated by GA in the aleurone layer.
==Annotated Information==
===Function===
[[File:Table1.jpg|left|thumb|200px|'''Table1''' Amino acid similarity and identity of rice CBLs (OsCBL1–10) and Arabidopsis CBLs (AtCBL1–10). For each pairwise comparison, similarity values are followed by identity values in parentheses.(from reference<ref name="ref1" />)]]
[[File:图片1.png|left|thumb|200px|'''Figure 1''' Yeast two-hybrid analysis demonstrates an interaction between OsCBLs and AtCIPKs. OsCBLs and AtCIPKs were translationally fused to the GAL4 DNA-binding domain (BD) and activation domain (AD) as indicated. Nutritional reporter systems minus Leu plus Trp (−LT) and minus Leu, Trp, and His (−LHT) and filter-lift GAL assays were employed to examine the interaction between OsCBLs and AtCIPKs (A). A positive control showing the interaction of AtCBL1 with AtCIPK1 is shown in B.(from reference<ref name="ref1" />)]]
[[File:图片2.png|right|thumb|200px|'''Figure 2''' OsCBL2 to 4 are localized to membranes. OsCBL1 to 4 were translationally fused to GFP and transiently expressed in barley aleurone protoplasts. The figure shows representative epifluorescence images (top) and bright-field images (bottom) of single, transformed cells. The unmagnified width of each image is approximately 40 μm.(from reference<ref name="ref1" />)]]
[[File:图片970009-3.png|left|thumb|200px|'''Figure 3''' Antisense OsCBL2 or HvCBL2delays the GA-induced vacuolation of barley aleurone protoplasts. Barley protoplasts were cotransfected with GFP andAsOsCBL2, GFP, andAsHvCBL2, or with GFP and empty cassette (pLZUbi) using the constructs diagrammed in A. The extent of vacuolation for individual protoplasts was scored using the five categories indicated in B. Vacuoles are seen as dark regions surrounded by bright regions of cytoplasm. The number of protoplasts in each category 48 h after transfection and 42 h after treatment with GA are shown in C forAsOsCBL2 and in D for AsHvCBL2.(from reference<ref name="ref1" />)]]
[[File:图片10-4.gif|right|thumb|200px|'''Figure 4''' Antisense OsCBL2 does not delay GA-induced transcription of GUS from anα-amylase promoter in rice half-grain. A diagram of the constructs introduced by particle bombardment is shown in A. Transcription of GUS from a GA-regulated α-amylase promoter was measured relative to expression of LUX (GUS:LUX ratio) driven by a constitutive ubiquitin promoter (B). Half-grains were incubated for 24 h without hormone (−GA) or with GA and the ratio of GUS-to-LUX expression determined in the presence and absence of the antisense construct.(from reference<ref name="ref1" />)]]
Many developmental and environmental signals are transduced through changes in intracellular calcium concentrations. Calcineurin B-like (CBL) proteins are calcium-binding proteins that are thought to function as plant signal transduction elements. RNA profiling using a rice (Oryza sativa cv Nipponbare) oligonucleotide microarray was used to monitor gene expression in de-embryonated rice grains. This analysis showed that a putative rice CBL gene responded to gibberellic acid, but not abscisic acid, treatment. The CBL gene family in rice contains at least 10 genes and these have extensive similarity to the CBLs of Arabidopsis (Arabidopsis thaliana). In yeast (Saccharomyces cerevisiae) two-hybrid assays, rice CBLs interact with the kinase partners of Arabidopsis CBLs. Only one rice CBL gene, OsCBL2, is up-regulated by GA in the aleurone layer.<ref name="ref1" />

'''OsCBLs Interact with AtCIPKs'''

We used the yeast two-hybrid system to demonstrate that rice CBLs interact with AtCIPKs. OsCBL1 to 4 were fused to the binding domain of GAL4, whereasAtCIPK1, 6, and 8 were fused to the activation domain of GAL4. Figure 1A shows the growth of yeast on selection medium and the corresponding assay for β-galactosidase when these different OsCBLs and AtCIPKs were used as bait and prey. As expected, the positive control showed interaction between AtCBL1 and AtCIPK1 (Fig. 1B)<ref name="ref2" />. OsCBL2, which has 74% amino acid similarity with AtCBL1 (Table I), also had a strong interaction with AtCIPK1. Like AtCBL1<ref name="ref3" />, OsCBL2 interacted strongly with AtCIPK8 and weakly with AtCIPK6. OsCBL4 also interacted strongly with AtCIPK1 and 8, but unlike OsCBL2, it did not interact with AtCIPK6. OsCBL1 and 3 both interacted with all three of the Arabidopsis CIPKs examined. These data provide evidence that OsCBL1 to 4 proteins are functional homologs of Arabidopsis CBL proteins.

Specificity for rice CBL function is likely to arise from differences in intracellular localization and different timing of expression. We show here that OsCBL2 and 3are targeted to the TN, and OsCBL4 to the PM (Fig. 2). Even though both OsCBL2 and 3 are targeted to the TN, their roles may be distinguished by the timing of their expression. For example, OsCBL2 is expressed in aleurone during germination, but OsCBL3 was not detectable in this tissue under the conditions that we have tested. OsCBL2 may be involved in vacuole function since transformation of aleurone protoplasts with an antisense construct of OsCBL2 orHvCBL2 slowed the rate of GA-induced vacuolation (Fig. 3), but not GA-induced transcription of an α-amylase reporter construct (Fig. 4).

===Expression===
[[File:图片4-5.png|left|thumb|200px|'''Figure 5''' OsCBL2 but not OsCBL1shows GA-specific up-regulation in embryoless rice half-grains. Total RNA was isolated from grains treated with ABA or GA (A) or no hormone (B) for the indicated times. Note that changes in mRNA abundance reflect changes occurring in the aleurone layer.(from reference<ref name="ref1" />)]]
[[File:图片1-6.png|right|thumb|200px|'''Figure 6''' The rice calcineurin B-like gene OsCBL2 is up-regulated by GA treatment of rice aleurone layers. Transcript abundance of OsCBL2 (black circles) and actin (white circles) as measured by hybridization to a rice oligonucleotide chip (A). Total RNA was extracted from embryoless rice half-grains treated with GA, ABA, or no hormone for the indicated time. Expression of GA-induced α-amylase, RAmy1A (B), and ABA-induced dehydrin (C) genes in the same chip experiment are shown for comparison.(from reference<ref name="ref1" />)]]
[[File:图片3-7.png|left|thumb|200px|'''Figure 7''' OsCBL2 is expressed in many rice organs and at all stages of rice plant development. Data are pooled from individual microarray experiments where each radius in the figure represents a separate experiment. RNA samples were pooled prior to hybridization to the chip, and the data are presented as normalized intensity values.(from reference<ref name="ref1" />)]]

OsCBL2 high expression in booting culms, young spikes, seedling roots and shoots. Expression of OsCBL2 is not induced by salt, drought, cold or ABA treatment. Although both OsCBL1 and 2 were expressed in rice half-grains, OsCBL2 was specifically up-regulated by GA (Fig. 5). GeneChip and RNA blotting experiments showed that OsCBL2 was most strongly expressed in aleurone and root and, using an expression intensity value of 50 as a cutoff, it is clear thatOsCBL2 is expressed in most tissues of the rice plant.

In aleurone cells, GA stimulates the synthesis and secretion of hydrolytic enzymes including α-amylase, promotes the vacuolation of the aleurone protoplast, and initiates programmed cell death. All of these processes require an increase in [Ca2+]cyt. Here we show that the expression of one gene in the rice CBL family is up-regulated in aleurone by GA, but not by ABA. We show that other rice CBLs are not differentially expressed by GA and ABA in aleurone or in vegetative tissues of the shoot or root. We present data showing that OsCBL2 is localized to the aleurone tonoplast (TN), and transient expression assays with rice and barley CBLs in barley aleurone cells indicate that they are likely to be involved in a GA-signaling pathway that leads to the vacuolation of the aleurone cell.<ref name="ref1" />

'''Hormone and Tissue-Specific Expression of OsCBLs'''

Only OsCBL2 contains the probe sequences found on the rice GeneChip microarray. It is therefore highly likely that the GA-regulated CBL identified in our microarray experiments (Fig. 6) is OsCBL2. We used the GeneChip microarray to quantitate the expression of OsCBL2 in the tissues of rice cv Nipponbare at all stages of development. These data are presented in Figure 7, where GeneChip intensity values for each tissue or organ are plotted with higher values farther from the center of the figure. OsCBL2 is expressed at high levels in roots of seedlings and tillering plants, during early stages of panicle and seed formation, and in the aleurone of mature grain. Expression of OsCBL2 was lowest in mature leaves and stems and in the emerging inflorescence shoot (Fig. 7).

To investigate the expression of OsCBLs in germinating Nipponbare rice seedling tissues, RNA was isolated from scutellum, shoots, and roots of 7-d-old seedlings and northern blots were hybridized with gene-specific probes for OsCBL1 to 3(Fig. 8). OsCBL2 is expressed in all rice seedling tissues and this confirmed the analysis made with the GeneChip array (Fig. 7). RNA blotting also confirmed thatOsCBL2 mRNA was abundant in roots relative to shoots and scutella, whereas theOsCBL1 transcript was more abundant in shoots than in roots and the OsCBL3transcript was abundant in both root and shoot tissue (Fig. 8). OsCBL4 and 7 were not expressed strongly enough in tissues of 7-d-old seedlings to be detected.<ref name="ref1" />

'''GA-Induced Expression of OsCBL2 Is Reduced in the Aleurone Layer of dwarf1 Mutant Rice'''

We also used RNA profiling and northern blotting to see whether GA-induced expression of OsCBL2 in aleurone cells was dependent on a signaling pathway that utilizes heterotrimeric G-proteins. For these experiments, RNA was isolated from half-grains of wild-type and dwarf1 (d1) mutant rice. The d1 rice mutant lacks the α-subunit of heterotrimeric G-proteins and shows a defective GA response, except at high GA concentrations<ref name="ref4" />. In the experiment shown in Figure 9A, there was a 3-fold increase in OsCBL2 expression in wild-type rice aleurone after 8-h incubation at a high (5 μM) GA concentration. When wild-type half-grains were incubated with a low (100 nM) GA concentration,OSCBL2 expression was still almost twice as high as that at time zero (Fig. 9A). Expression of OsCBL2 in d1 half-grains, however, was much reduced at 5 μM GA compared to wild type, and transcript abundance was virtually unchanged following 8-h incubation with 100 nM GA (Fig. 9A). Similar changes in expression were observed for α-amylase in d1 and wild-type rice half-grains (Fig. 9B). Thus, there was virtually no change in the expression of the RAmy1A gene at low GA concentrations in d1 rice, whereas in wild-type rice grain low GA brought about a large change in RAmy1A expression (Fig. 9B). RNA blotting was used to confirm the microarray data on CBL expression as shown in Figure 9C. Expression ofOsCBL2 was observed in wild-type aleurone and the d1 mutant at 5 μM GA, butOsCBL2 transcript could not be detected in the d1 mutant at 100 nM GA.<ref name="ref1" />

===Mutation===
The amount of OsCBL2 transcript was increased specifically by GA treatment in rice aleurone (Figs.5,6, and 9). Using microarray analyses and RNA blots, we show that the up-regulation ofOsCBL2 expression occurs within 3 h of GA treatment and persists for at least 48 h (Figs.5,6, and 9). Data from experiments with the d1 mutant of rice strongly suggest that OsCBL2 transcription is part of a GA-signaling pathway that involves the α-subunit of heterotrimeric G-proteins (Fig. 9).

OsCBL2 expression in aleurone is specifically up-regulated by GA (Figs. 5 and 6). Transcript abundance was unchanged when rice half-grains were incubated with ABA or no hormone, or when seedlings were exposed to various stresses. Perhaps more interesting is our observation that correct expression of OsCBL2 in aleurone protoplasts seems to be required for proper vacuolation (Fig. 3). When barley aleurone protoplasts were transiently transformed with antisense constructs forOsCBL2 or HvCBL2 (Fig. 3, C and D), vacuolation was retarded. This was a specific effect in that AsOsCBL2 did not inhibit transcription from an α-amylase promoter (Fig. 4). One interpretation of these data is that OsCBL2 interacts with one or more proteins in aleurone cells, and that an insufficient amount of OsCBL2 leads to a defect in vacuole function. For example, OsCBL2 may activate a CIPK and the OsCBL2/CIPK complex may promote vacuole fusion and enlargement. AntisenseOsCBL2 would reduce the amount of OsCBL2 and prevent the formation of the active OsCBL/CIPK complex. This speculation is consistent with our previous data showing that a Ser/Thr protein kinase present on the TN in barley aleurone protoplasts is involved in the gating of a Ca2+-regulated ion channel<ref name="ref5" />.

===Knowledge Extension===
A homolog with 91% sequence identity to OsCBL2 was cloned from barley (Hordeum vulgare cv Himalaya), and designated HvCBL2. We examined the localization and function of OsCBL2 and HvCBL2 in rice and barley aleurone because changes in cytosolic calcium have been implicated in the response of the aleurone cell to GA. Green fluorescent protein translational fusions of OsCBL2 and OsCBL3 were localized to the tonoplast of aleurone cell protein storage vacuoles and OsCBL4-green fluorescent protein was localized to the plasma membrane. Data from experiments using antisense expression of OsCBL2 and HvCBL2 are consistent with a role for OsCBL2 in promoting vacuolation of barley aleurone cells following treatment with GA.<ref name="ref1" />

Calcium-binding proteins with similarity to calcineurin B have been cloned recently from plants <ref name="ref6" />. These calcineurin B-like proteins (CBLs) contain calcium-binding EF hands and are similar to the regulatory B-subunit of calcineurin and to the neuronal calcium sensor <ref name="ref7" />. CBLs, therefore, have the potential to transduce [Ca2+]cyt signals and are thought to play roles in stress and hormone signaling in plants <ref name="ref8" />. The first CBL gene to be cloned was a salt overly sensitive (SOS) gene from Arabidopsis (Arabidopsis thaliana) that was designatedSOS3 . SOS3 is identical to AtCLB4, a salt-responsive CBL gene cloned independently from Arabidopsis <ref name="ref9" />. At least 10 expressed CBL genes and proteins from Arabidopsis have now been identified, and many CBL genes are present in the sequenced rice (Oryza sativa) genome<ref name="ref10" />.

==Labs working on this gene==
Department of Plant and Microbial Biology, University of California, Berkeley, California 94720–3102 (Y.-s.H., P.C.B., Y.H.C., R.L.J.); and Torrey Mesa Research Institute, Syngenta Research and Technology, San Diego, California 92121 (H.-S.C., T.Z.);
State key lab of crop genetics and germplasm enhancement, Nanjing Agricultural University, Nanjing, 210095, PR China; College of Chemistry and Life Science, Zhejiang Normal University, Jinhua, 321004, PR China

==References==
<references>
<ref name="ref1"> Hwang Y S, Bethke P C, Cheong Y H, Chang H S, Zhu T, Jones R L. A gibberellin-regulated calcineurin B in rice localizes to the tonoplast and is implicated in vacuole function[J]. Plant Physiol, 2005, 138: 1347-1358</ref>
<ref name="ref2"> Kim KN, Cheong YH, Gupta R, Luan S (2000) Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Plant Physiol 124: 1844–1853</ref>
<ref name="ref3">Kolukisaoglu U, Weinl S, Blazevic D, Batistic O, Kudla J (2004) Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol 134: 43–58</ref>
<ref name="ref4">Ueguchi-Tanaka M, Fujisawa Y, Kobayashi M, Ashikari M, Iwasaki Y, Kitano H, Matsuoka M (2000) Rice dwarf mutant d1, which is defective in the alpha subunit of the heterotrimeric G protein, affects gibberellin signal transduction. Proc Natl Acad Sci USA 97: 11638–11643 </ref>
<ref name="ref5">Bethke PC, Jones RL (1997) Reversible protein phosphorylation regulates the activity of the slow-vacuolar ion channel. Plant J 11: 1227–1235</ref>
<ref name="ref6">Shi JR, Kim KN, Ritz O, Albrecht V, Gupta R, Harter K, Luan S, Kudla J (1999) Novel protein kinases associated with calcineurin B-like calcium sensors in Arabidopsis. Plant Cell 11: 2393–2405</ref>
<ref name="ref7">Liu J, Zhu J-K (1998) A calcium sensor homolog required for plant salt tolerance. Science 280: 1943–1945</ref>
<ref name="ref8">Luan S, Kudla J, Rodriguez-Concepcion M, Yalovsky S, Gruissem W(2002) Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. Plant Cell (Suppl) 14: S389–S400</ref>
<ref name="ref9">Kim KN, Cheong YH, Gupta R, Luan S (2000) Interaction specificity of Arabidopsis calcineurin B-like calcium sensors and their target kinases. Plant Physiol 124: 1844–1853</ref>
<ref name="ref10">Kolukisaoglu U, Weinl S, Blazevic D, Batistic O, Kudla J (2004) Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol 134: 43–58</ref>
</references>

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

==Structured Information==

Os12g0610200

2017-03-07T01:59:15Z

Xysj2019:

''OsPIL11'', with accession number Os12g0610200, is one of six putative phytochrome-interacting factors(PIFs).

==Annotated Information==
===Constitution===
''OsPIL11'' contain a conserved sequence motif at their N-terminal regions, designated as the active phytochrome-binding (APB) motif (active phytochrome-binding protein, also named as PIL motif). Four invariant amino acid residues(ELxxxxGQ) are critical determinants of the APB motif. This motif is necessary for binding to the biologically active Pfr form of phyB <ref name="ref1" />.

===Function===
''OsPIL11'' is a member of the rice phytochrome-interacting factors (PIFs) family. Nakamura et al identified six candidate genes encoding PIFs, designated ''OsPIL11'' to ''OsPIL16'', via homologous analysis in rice genome. ''OsPIL11'' contain APB motif at their N-termini, suggesting the possible interaction between PIF and phytochromes in rice .

PIFs, as a small subset of the basic helix-loop-helix (bHLH) transcription factor superfamily, have been found to bind to the G-box motif in the promoter region of light-regulated genes. Thus, PIFs constitute a signal transfer pathway from photoactivated phytochromes to the light-regulation of gene expression that controls photomorphogenesis in plants. Among phytochrome associated proteins, phytochrome-interacting factors (PIFs) are central player in phytochrome-mediated signal transduction.
In addition, ''OsPIL11'' plays important roles in light signal transduction in rice leaves and its development, and it may also involve in the regulation of plant hormones.

===Expression===
''OsPIF11'' gene is widely expressed in rice roots, stems, new leaves and old leaves. The ''OsPIFs11'' transcription factor expression level in the leaves is significantly higher than in the roots and stems, and the expression is the lowest in roots.

The expression of ''OsPIL11'' also is organ-specific and is regulated by leaf development, abscisic acid (ABA), jasmonic acid (JA) and salicylic acid (SA). ''OsPIL11'' is involved in red light-induced de-etiolation, but not in far-red lignt-induced de-etiolation in transgenic tobacco. ''OsPIL11'' expressed higher in the new leaves than in the old leaves. Therefore, the expression of ''OsPIL11'' gene was regulated by hormones in rice.

==Labs working on this gene==
* High-Tech Research Center, Shandong Academy of Agricultural Sciences, Ji’nan 250100, China

* College of Life Science, Henan Normal University, Xinxiang 453007, China

* College of Life Sciences, Shandong Normal University, Jinan 250014, China

* Laboratory of Molecular Microbiology, School of Agriculture, Nagoya University, Chikusa-ku, Nagoya 464-8601, Japan

* National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China

==References==
<references>
* <ref name="ref1">
Nakamura Y, Kato T, Yamashino T, Murakami M, Mizuno T. Characterization of a
set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa. Biosci
Biotechnol Biochem. 2007 May;71(5):1183-91. PubMed PMID: 17485859.
</ref>
</references>

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

==Structured Information==

Os12g0610200

2017-03-07T01:58:30Z

Xysj2019:

''OsPIL11'', with accession number Os12g0610200, is one of six putative phytochrome-interacting factors(PIFs).

==Annotated Information==
===Constitution===
''OsPIL11'' contain a conserved sequence motif at their N-terminal regions, designated as the active phytochrome-binding (APB) motif (active phytochrome-binding protein, also named as PIL motif). Four invariant amino acid residues(ELxxxxGQ) are critical determinants of the APB motif. This motif is necessary for binding to the biologically active Pfr form of phyB <ref name="ref1" />.

===Function===
''OsPIL11'' is a member of the rice phytochrome-interacting factors (PIFs) family. Nakamura et al <ref name="ref2" /> identified six candidate genes encoding PIFs, designated ''OsPIL11'' to ''OsPIL16'', via homologous analysis in rice genome. ''OsPIL11'' contain APB motif at their N-termini, suggesting the possible interaction between PIF and phytochromes in rice <ref name="ref2" />.

PIFs, as a small subset of the basic helix-loop-helix (bHLH) transcription factor superfamily, have been found to bind to the G-box motif in the promoter region of light-regulated genes. Thus, PIFs constitute a signal transfer pathway from photoactivated phytochromes to the light-regulation of gene expression that controls photomorphogenesis in plants. Among phytochrome associated proteins, phytochrome-interacting factors (PIFs) are central player in phytochrome-mediated signal transduction <ref name="ref3" /><ref name="ref4" />.
In addition, ''OsPIL11'' plays important roles in light signal transduction in rice leaves and its development, and it may also involve in the regulation of plant hormones.

===Expression===
''OsPIF11'' gene is widely expressed in rice roots, stems, new leaves and old leaves. The ''OsPIFs11'' transcription factor expression level in the leaves is significantly higher than in the roots and stems, and the expression is the lowest in roots.

The expression of ''OsPIL11'' also is organ-specific and is regulated by leaf development, abscisic acid (ABA), jasmonic acid (JA) and salicylic acid (SA). ''OsPIL11'' is involved in red light-induced de-etiolation, but not in far-red lignt-induced de-etiolation in transgenic tobacco. ''OsPIL11'' expressed higher in the new leaves than in the old leaves. Therefore, the expression of ''OsPIL11'' gene was regulated by hormones in rice <ref name="ref5" />.

==Labs working on this gene==
* High-Tech Research Center, Shandong Academy of Agricultural Sciences, Ji’nan 250100, China

* College of Life Science, Henan Normal University, Xinxiang 453007, China

* College of Life Sciences, Shandong Normal University, Jinan 250014, China

* Laboratory of Molecular Microbiology, School of Agriculture, Nagoya University, Chikusa-ku, Nagoya 464-8601, Japan

* National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China

==References==
<references>
* <ref name="ref1">
Nakamura Y, Kato T, Yamashino T, Murakami M, Mizuno T. Characterization of a
set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa. Biosci
Biotechnol Biochem. 2007 May;71(5):1183-91. PubMed PMID: 17485859.
</ref>
</references>

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

==Structured Information==

RiceWiki:TBC

2017-03-07T01:53:44Z

Xysj2019:

To be curated 
'''Every Gene Has A Story ！'''
{|class="wikitable" style="width:90%;text-align:center"
|-
!Gene name
!RAP ID
!MSU ID
!Reference Title
|-
|''OsSOS1''
|[[Os12g0641100]]
|LOC_Os12g44360
|Huan Wang;Meishan Zhang;Rui Guo;Decheng Shi;Bao Liu;Xiuyun Lin;Chunwu Yan Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.)BMC Plant Biology, 2012, 12: 194
|-
|''OsCCD1''
|[[Os12g0640600]]
|LOC_Os12g44310
|Andrea Ilg;Qiuju Yu;Patrick Schaub;Peter Beyer;Salim Al-Babili Overexpression of the rice carotenoid cleavage dioxygenase 1 gene in Golden Rice endosperm suggests apocarotenoids as substrates in planta Planta, 2010, 232(3): 691-699
|-
|''OsPTR2''
|[[Os12g0638200]]
|LOC_Os12g44100
|Yuge Li;Jie Ouyang;Ya-Yun Wang;Rui Hu;Kuaifei Xia;Jun Duan;Yaqin Wang;Yi-Fang Tsay;Mingyong Zhang Disruption of the rice nitrate transporter OsNPF2.2 hinders root-to-shoot nitrate transport and vascular development Scientific Reports, 2015, 5: 9635
|-
|''Osgr-rbp4''
|[[Os12g0632000]]
|LOC_Os12g43600
|Chandan Sahi;Manu Agarwal;Amanjot Singha;Anil Grover Molecular characterization of a novel isoform of rice (Oryza sativa L.) glycine rich-RNA binding protein and evidence for its involvement in high temperature stress response Plant Science, 2007, 173(2): 144-155
|-
|''TOND1''
|[[Os12g0630100]]
|LOC_Os12g43440
|Yangjun Zhang;Lubin Tan;Zuofeng Zhu;Lixing Yuan;Daoxin Xie;Chuanqing Sun TOND1 confers tolerance to nitrogen deficiency in rice The Plant Journal, 2014,
|-
|''OsSpo11-4''
|[[Os12g0622500]]
|LOC_Os12g42760
|Yoshinori Shingu;Takeshi Tokai;Yasuo Agawa;Kentaro Toyota;Selina Ahamed;Makiko Kawagishi-Kobayashi;Akira Komatsu;Tsutomu Mikawa;Masa-Toshi Yamamoto;Kyo Wakasa;Takehiko Shibata;Kohji Kusano The double-stranded break-forming activity of plant SPO11s and a novel rice SPO11 revealed by a Drosophila bioassay BMC Microbiology, 2012, 13: 1
|-
|''OsYABBY6''
|[[Os12g0621100]]
|LOC_Os12g42610
|Taiyo Toriba;Kohsuke Harada;Atsushi Takamura;Hidemitsu Nakamura;Hiroaki Ichikawa;Takuya Suzaki;Hiro-Yuki Hirano Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1 Molecular Genetics and Genomics, 2007, 277(5): 457-468
|-
|''OsHAP2F''
|[[Os12g0618600]]
|LOC_Os12g42400
|Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
|-
|''OsPPKL3''
|[[Os12g0617900]]
|LOC_Os12g42310
| Xiaojun Zhang;Jianfei Wang;Ji Huang;Hongxia Lan;Cailin Wang;Congfei Yin;Yunyu Wu;Haijuan Tang;Qian Qian;Jiayang Li;Hongsheng Zhang Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice Proceedings of the National Academy of Sciences, 2012, 109(52): 21534-21539
|-
|''OsNCED5''
|[[Os12g0617400]]
|LOC_Os12g42280
|Guohui Zhu;Nenghui Ye;Jianhua Zhang Glucose-Induced Delay of Seed Germination in Rice is Mediated by the Suppression of ABA Catabolism Rather Than an Enhancement of ABA Biosynthesis Plant and Cell Physiology, 2009, 50(3): 644-651
|-
|''OsPCF8''
|[[Os12g0616400]]
|LOC_Os12g42190
|CHUNHUA YANG;DAYONG LI;DONGHAI MAO;XUE LIU;CHENGJUN JI;XIAOBING LI;XIANFENG ZHAO;ZHUKUAN CHENG;CAIYAN CHEN;LIHUANG ZHU Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.) Plant, Cell & Environment, 2013, 36(12): 2207-2218
|-
|''OsPID''
|[[Os12g0614600]]
|LOC_Os12g42020
|Yutaka Morita;Junko Kyozuka Characterization of OsPID, the Rice Ortholog of PINOID, and its Possible Involvement in the Control of Polar Auxin Transport Plant and Cell Physiology, 2007, 48(3): 540-549
|-
|''OsARF25''
|[[Os12g0613700]]
|LOC_Os12g41950
| YanHua Qi;SuiKang Wang;ChenJia Shen;SaiNa Zhang;Yue Chen;YanXia Xu;Yu Liu;YunRong Wu;DeAn Jiang OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa) New Phytologist, 2012, 193(1): 109-120
|-
|''OsTRBF2''
|[[Os12g0613300]]
|LOC_Os12g41920
| Mi Young Byun;Jong-Pil Hong;Woo Taek Kim Identification and characterization of three telomere repeat-binding factors in rice Biochemical and Biophysical Research Communications, 2008, 372(1): 85-90
|-
|''OsHAP2B''
|[[Os12g0613000]]
|LOC_Os12g41880
|Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
|-
|''OSHB3''
|[[Os12g0612700]]
|LOC_Os12g41860
|Jun-Ichi Itoh;Ken-Ichiro Hibara;Yutaka Sato;Yasuo Nagato Developmental Role and Auxin Responsiveness of Class III Homeodomain Leucine Zipper Gene Family Members in Rice Plant Physiology, 2008, 147(4): 1960-1975
|-
|''OspPLAIIIζ''
|[[Os12g0611300]]
|LOC_Os12g41720
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OMTN3''
|[[Os12g0610600]]
|LOC_Os12g41680
|Yujie Fang;Kabin Xie;Lizhong Xiong Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice Journal of Experimental Botany, 2014, 65(8): 2119-2135
|-
|''OsPIL11''
|[[Os12g0610200]]
|LOC_Os12g41650
|Yuko NAKAMURA;Takahiko KATO;Takafumi YAMASHINO;Masaya MURAKAMI;Takeshi MIZUNO Characterization of a Set of Phytochrome-Interacting Factor-Like bHLH Proteins in Oryza sativa Bioscience, Biotechnology, and Biochemistry, 2007, 71(5): 1183-1191
|-
|''OsCam3''
|[[Os12g0603800]]
|LOC_Os12g41110
|Aumnart Chinpongpanich;Nuchanat Wutipraditkul;Sarut Thairat;Teerapong Buaboocha Biophysical characterization of calmodulin and calmodulin-like proteins from rice, Oryza sativa L. Acta Biochimica et Biophysica Sinica, 2011, 43(11): 867-876
|-
|''OsbZIP88''
|[[Os12g0601800]]
|LOC_Os12g40920
|Qian Ji;Liang-sheng Zhang;Yi-fei Wang;Jian Wang Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa Journal of Shanghai University (English Edition), 2009, 13(2): 174-182
|-
|''OsIAA3''
|[[Os12g0601400]]
|LOC_Os12g40900
|Mukesh Jain;Navneet Kaur;Rohini Garg;Jitendra K. Thakur;Akhilesh K. Tyagi;Jitendra P. Khurana Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa) Functional & Integrative Genomics, 2006, 6(1): 47-59
|-
|''OsWRKY83''
|[[Os12g0597700]]
|LOC_Os12g40570
|Christian A. Ross;Yue Liu;Qingxi J. Shen The WRKY Gene Family in Rice (Oryza sativa) Journal of Integrative Plant Biology, 2007, 49(6): 827-842
|-
|''OsUAH''
|[[Os12g0597500]]
|LOC_Os12g40550
|Juan Li;Rui-Ying Qin;Hao Li;Rong-Fang Xu;Ya-Chun Yang;Da-Hu Ni;Hui Ma;Li Li;Peng-Cheng Wei;Jian-Bo Yang Low-Temperature-Induced Expression of Rice Ureidoglycolate Amidohydrolase is Mediated by a C-Repeat/Dehydration Responsive Element that Specifically Interacts with Rice C-Repeat-Binding Factor 3 Frontiers in Plant Science, 2015, 6: 1011
|-
|''OsCBL2''
|[[Os12g0597000]]
|LOC_Os12g40510
|Yong-sic Hwang;Paul C. Bethke;Yong Hwa Cheong;Hur-Song Chang;Tong Zhu;Russell L. Jones A Gibberellin-Regulated Calcineurin B in Rice Localizes to the Tonoplast and Is Implicated in Vacuole Function Plant Physiology, 2005, 138(3): 1347-1358
|-
|''HSA1a''
|[[Os12g0589400]]
|LOC_Os12g39880
|Takahiko Kubo;Tomonori Takashi;Motoyuki Ashikari;Atsushi Yoshimura;Nori Kurata Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice Molecular Plant, 2016, 9(2): 221-232
|-
|''OsNAAT6''
|[[Os12g0588900]]
|LOC_Os12g39840
|Haruhiko Inoue;Michiko Takahashi;Takanori Kobayashi;Motofumi Suzuki;Hiromi Nakanishi;Satoshi Mori;Naoko K. Nishizawa Identification and localisation of the rice nicotianamine aminotransferase gene OsNAAT1 expression suggests the site of phytosiderophore synthesis in rice Plant Molecular Biology, 2008, 66(1-2): 193-203
|-
|''CycD5;2''
|[[Os12g0588800]]
|LOC_Os12g39830
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|-
|''OsSAPK9''
|[[Os12g0586100]]
|LOC_Os12g39630
|Mei-Rong Xu;Li-Yu Huang;Fan Zhang;Ling-Hua Zhu;Yong-Li Zhou;Zhi-Kang Li Genome-Wide Phylogenetic Analysis of Stress-Activated Protein Kinase Genes in Rice (OsSAPKs) and Expression Profiling in Response to Xanthomonas oryzae pv. oryzicola Infection Plant Molecular Biology Reporter, 2013, 31(4): 877-885
|-
|''ZFP252''
|[[Os12g0583700]]
|LOC_Os12g39400
|Dong-Qing Xu;Ji Huang;Shu-Qiao Guo;Xia Yang;Yong-Mei Bao;Hai-Juan Tang;Hong-Sheng Zhang Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.) FEBS Letters, 2008, 582(7): 1037-1043
|-
|''CycA3;2''
|[[Os12g0581800]]
|LOC_Os12g39210
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|-
|''ZOS12-7''
|[[Os12g0578800]]
|LOC_Os12g38960
|Duarte D. Figueiredo;Pedro M. Barros;André M. Cordeiro;Tânia S. Serra;Tiago Lourenço;Subhash Chander;M. Margarida Oliveira;Nelson J. M. Saibo Seven zinc-finger transcription factors are novel regulators of the stress responsive gene OsDREB1B Journal of Experimental Botany, 2012, 63(10): 3643-3656
|-
|''OsMYB91''
|[[Os12g0572000]]
|LOC_Os12g38400
| Ning Zhu;Saifeng Cheng;Xiaoyun Liu;Hao Du;Mingqiu Dai;Dao-Xiu Zhou;Wenjing Yang;Yu Zhao The R2R3-type MYB gene OsMYB91 has a function in coordinating plant growth and salt stress tolerance in rice Plant Science, 2015, 236: 146-156
|-
|''Spl11''
|[[Os12g0570000]]
|LOC_Os12g38210
|Jinling Liu;Chan Ho Park;Feng He;Minoru Nagano;Mo Wang;Maria Bellizzi;Kai Zhang;Xiaoshan Zeng;Wende Liu;Yuese Ning;Yoji Kawano;Guo-Liang Wang The RhoGAP SPIN6 Associates with SPL11 and OsRac1 and Negatively Regulates Programmed Cell Death and Innate Immunity in Rice PLoS Pathogens, 2015, 11(2): e1004629
|-
|''OsHSP23.7''
|[[Os12g0569700]]
|LOC_Os12g38180
|Jie Zou;Cuifang Liu;Ailing Liu;Dian Zou;Xinbo Chen Overexpression of OsHsp17.0 and OsHsp23.7 enhances drought and salt tolerance in rice Journal of Plant Physiology, 2012, 169(6): 628-635
|-
|''OsBOR1''
|[[Os12g0566000]]
|LOC_Os12g37840
|Yuko Nakagawa;Hideki Hanaoka;Masaharu Kobayashi;Kazumaru Miyoshi;Kyoko Miwa;Toru Fujiwara Cell-Type Specificity of the Expression of Os BOR1, a Rice Efflux Boron Transporter Gene, Is Regulated in Response to Boron Availability for Efficient Boron Uptake and Xylem Loading The Plant Cell, 2007, 19(8): 2624-2635
|-
|''OsOBF1''
|[[Os12g0560900]]
|LOC_Os12g37410
|Qian Ji;Liang-sheng Zhang;Yi-fei Wang;Jian Wang Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa Journal of Shanghai University (English Edition), 2009, 13(2): 174-182
|-
|''OsSar1b''
|[[Os12g0560300]]
|LOC_Os12g37360
|Lihong Tian;Ling Ling Dai;Zhi Jie Yin;Masako Fukuda;Toshihiro Kumamaru;Xiang Bai Dong;Xiu Ping Xu;Le Qing Qu Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm Journal of Experimental Botany, 2013, 64(10): 2831-2845
|-
|''OsLOX11''
|[[Os12g0559200]]
|LOC_Os12g37260
|Soma S. Marla;V. K. Singh LOX genes in blast fungus (Magnaporthe grisea) resistance in rice Functional & Integrative Genomics, 2012, 12(2): 265-275
|-
|''OsDi19-7''
|[[Os12g0556100]]
|LOC_Os12g36900
|Lili Wang;Changchun Yu;Cong Chen;Chunlan He;Yingguo Zhu;Wenchao Huang Identification of rice Di19 family reveals OsDi19-4 involved in drought resistance Plant Cell Reports, 2014, 33(12): 2047-2062
|-
|''OsPR10a''
|[[Os12g0555500]]
|LOC_Os12g36880
|Changhyun Choi;Seon-Hee Hwang;Il Ran Fang;Soon Il Kwon;Sang Ryeol Park;Ilpyung Ahn;Jung Bong Kim;Duk-Ju Hwang Molecular characterization of Oryza sativa WRKY6, which binds to W-box-like element 1 of the Oryza sativa pathogenesis-related (PR) 10a promoter and confers reduced susceptibility to pathogens New Phytologist, 2015, 208(3): 846-859
|-
|''OspPLAIIλ''
|[[Os12g0552200]]
|LOC_Os12g36610
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OspPLAIIκ''
|[[Os12g0551600]]
|LOC_Os12g36530
|Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
|-
|''OsNDPK2''
|[[Os12g0548300]]
|LOC_Os12g36194
|Song Mi Cho;Seo Ho Shin;Kwang Sang Kim;Young Cheol Kim;Moo Young Eun;Baik Ho Cho Enhanced Expression of a Gene Encoding a Nucleoside Diphosphate Kinase 1 (OsNDPK1) in Rice Plants upon Infection with Bacterial Pathogens Molecules and Cells, 2004, 18(3): 390-395
|-
|''pms3''
|[[Os12g0545900]]
|LOC_Os12g36030
|Hai Zhou;Qinjian Liu;Jing Li;Dagang Jiang;Lingyan Zhou;Ping Wu;Sen Lu;Feng Li;Liya Zhu;Zhenlan Liu;Letian Chen;Yao-Guang Liu;Chuxiong Zhuang Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA Cell Research, 2012, 22(4): 649-660
|-
|''Osrboh9''
|[[Os12g0541300]]
|LOC_Os12g35610
|Dongping Zhang;Li Chen;Dahong Li;Bing Lv;Yun Chen;Jingui Chen;XuejiaoYan;Jiansheng Liang OsRACK1 Is Involved in Abscisic Acid- and H2O2-Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.) PLoS ONE, 2014, 9(5): e97120
|-
|''OsGRX29''
|[[Os12g0538700]]
|LOC_Os12g35340
|Rohini Garg;Shalu Jhanwar;Akhilesh K. Tyagi;Mukesh Jain Genome-Wide Survey and Expression Analysis Suggest Diverse Roles of Glutaredoxin Gene Family Members During Development and Response to Various Stimuli in Rice DNA Research, 2010, 17(6): 353-367
|-
|''OsGRX28''
|[[Os12g0538600]]
|LOC_Os12g35330
|Rohini Garg;Shalu Jhanwar;Akhilesh K. Tyagi;Mukesh Jain Genome-Wide Survey and Expression Analysis Suggest Diverse Roles of Glutaredoxin Gene Family Members During Development and Response to Various Stimuli in Rice DNA Research, 2010, 17(6): 353-367
|-
|''OsVIL2''
|[[Os12g0533500]]
|LOC_Os12g34850
|Jungil Yang;Shinyong Lee;Runlai Hang;Sung-Ryul Kim;Yang-Seok Lee;Xiaofeng Cao;Richard Amasino;Gynheung An OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice The Plant Journal, 2013, 73(4): 566-578
|-
|''TAM1''
|[[Os12g0520200]]
|LOC_Os12g33610
|Bradley W. Tonnessen;Patricia Manosalva;Jillian M. Lang;Marietta Baraoidan;Alicia Bordeos;Ramil Mauleon;James Oard;Scot Hulbert;Hei Leung;Jan E. Leach Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance Plant Molecular Biology, 2015, 87(3): 273-286
|-
|''OsMYB46''
|[[Os12g0515300]]
|LOC_Os12g33070
|Ruiqin Zhong;Chanhui Lee;Ryan L. McCarthy;Cromwell K. Reeves;Evan G. Jones;Zheng-Hua Ye Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors Plant and Cell Physiology, 2011, 52(10): 1856-1871
|-
|''SAB23''
|[[Os12g0514400]]
|LOC_Os12g32980
|Young-Su Seo;Mawsheng Chern;Laura E. Bartley;Muho Han;Ki-Hong Jung;Insuk Lee;Harkamal Walia;Todd Richter;Xia Xu;Peijian Cao;Wei Bai;Rajeshwari Ramanan;Fawn Amonpant;Loganathan Arul;Patrick E. Canlas;Randy Ruan;Chang-Jin Park;Xuewei Chen;Sohyun Hwang;Jong-Seong Jeon;Pamela C. Ronald Towards Establishment of a Rice Stress Response Interactome PLoS Genetics, 2011, 7(4): e1002020
|-
|''OsYUCCA5''
|[[Os12g0512000]]
|LOC_Os12g32750
|Yuko Yamamoto;Noriko Kamiya;Yoichi Morinaka;Makoto Matsuoka;Takashi Sazuka Auxin Biosynthesis by the YUCCA Genes in Rice Plant Physiology, 2007, 143(3): 1362-1371
|-
|''OsbHLH133''
|[[Os12g0508500]]
|LOC_Os12g32400
|Lu Wang;Yinghui Ying;Reena Narsai;Lingxiao Ye;Luqing Zheng;Jingluan Tian;James Whelan;Huixia Shou Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa Plant, Cell & Environment, 2013, 36(1): 224-236
|-
|''OsWRKY85''
|[[Os12g0507300]]
|LOC_Os12g32250
|Christian A. Ross;Yue Liu;Qingxi J. Shen The WRKY Gene Family in Rice (Oryza sativa) Journal of Integrative Plant Biology, 2007, 49(6): 827-842
|-
|''CycA21''
|[[Os12g0502300]]
|LOC_Os12g31810
|Honggui La;Jun Li;Zhendong Ji;Yanjun Cheng;Xiuli Li;Shuye Jiang;Prasanna Nori Venkatesh;Srinivasan Ramachandran Genome-wide analysis of cyclin family in rice (Oryza Sativa L.) Molecular Genetics and Genomics, 2006, 275(4): 374-386
|}

Test

2017-03-06T15:20:37Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|629
|''QHB''
|[[Os01g0854500]]
|10.1046/j.1365-313X.2003.01816.x
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|632
|''OsSBP''
|[[Os01g0916400]]
|10.1271/bbb.68.873
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|640
|''LRK1''
|[[Os02g0154200]]
|10.1111/j.1467-7652.2009.00428.x
|
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|643
|''CYP734A2''
|[[Os02g0204700]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|644
|''OsHPL2''
|[[Os02g0218700]]
|10.1111/j.1365-313X.2009.04031.x
|
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|660
|''OsDof12''
|[[Os03g0169600]]
|10.1007/s00425-009-0893-7
|
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|664
|''OsAOS2''
|[[Os03g0225900]]
|10.1094/MPMI-19-1127
|
|-
|665
|''RPN10''
|[[Os03g0243300]]
|10.5511/plantbiotechnology.21.233
|
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|670
|''OsEIL1''
|[[Os03g0324300]]
|10.1007/s11103-005-6184-1
|
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|673
|''OsIRO3''
|[[Os03g0379300]]
|10.1186/1471-2229-10-166
|
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|Finished
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|Finished
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|Annotated
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Os05g0343400

2017-03-06T15:20:05Z

Xysj2019: /* Expression */

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
==Annotated Infomation==
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''

===Function===
* '''''WRKY''''' proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.
* '''''WRKY''''' proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco.
* The rice genome is predicted to contain over 100 WRKY (OsWRKY)genes.
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.

===Phenotypic analysis===
* Overexpression of '''''OsWRKY53''''' enhances resistance to rice blast fungus

===Expression===
* Northern hybridization revealed a significant increase in the level of '''''WRKY53''''' mRNA at 6 h after inoculation, after which it decreased gradually

{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
* National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
* Department of Life Science, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, Kanagawa 216-0011, Japan
* Plant Acquired Immunity Research Unit, Discovery Research Institute, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
* Meiji Seika Kaisha Ltd., 760 Morooka, Kohoku-ku, Yokohama, Kanagawa 222-8567, Japan

==References==
<references>
* <ref name="ref1">
Chujo T, Takai R, Akimoto-Tomiyama C, Ando S, Minami E, Nagamura Y, Kaku H,
Shibuya N, Yasuda M, Nakashita H, Umemura K, Okada A, Okada K, Nojiri H, Yamane
H. Involvement of the elicitor-induced gene OsWRKY53 in the expression of
defense-related genes in rice. Biochim Biophys Acta. 2007
Jul-Aug;1769(7-8):497-505. PubMed PMID: 17532485.

</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Os05g0343400

2017-03-06T15:19:53Z

Xysj2019: /* Expression */

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
==Annotated Infomation==
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''

===Function===
* '''''WRKY''''' proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.
* '''''WRKY''''' proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco.
* The rice genome is predicted to contain over 100 WRKY (OsWRKY)genes.
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.

===Phenotypic analysis===
* Overexpression of '''''OsWRKY53''''' enhances resistance to rice blast fungus

===Expression===
* Northern hybridization revealed a significant increase in the level of '''''WRKY53''''' mRNA at 6 h after inoculation, after which it decreased gradually

Table 1
{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
* National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
* Department of Life Science, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, Kanagawa 216-0011, Japan
* Plant Acquired Immunity Research Unit, Discovery Research Institute, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
* Meiji Seika Kaisha Ltd., 760 Morooka, Kohoku-ku, Yokohama, Kanagawa 222-8567, Japan

==References==
<references>
* <ref name="ref1">
Chujo T, Takai R, Akimoto-Tomiyama C, Ando S, Minami E, Nagamura Y, Kaku H,
Shibuya N, Yasuda M, Nakashita H, Umemura K, Okada A, Okada K, Nojiri H, Yamane
H. Involvement of the elicitor-induced gene OsWRKY53 in the expression of
defense-related genes in rice. Biochim Biophys Acta. 2007
Jul-Aug;1769(7-8):497-505. PubMed PMID: 17532485.

</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Os05g0343400

2017-03-06T15:19:36Z

Xysj2019:

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
==Annotated Infomation==
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''

===Function===
* '''''WRKY''''' proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.
* '''''WRKY''''' proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco.
* The rice genome is predicted to contain over 100 WRKY (OsWRKY)genes.
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.

===Phenotypic analysis===
* Overexpression of '''''OsWRKY53''''' enhances resistance to rice blast fungus

===Expression===
* Northern hybridization revealed a significant increase in the level of '''''WRKY53''''' mRNA at 6 h after inoculation, after which it decreased gradually

Table 1
{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
* National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
* Department of Life Science, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, Kanagawa 216-0011, Japan
* Plant Acquired Immunity Research Unit, Discovery Research Institute, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
* Meiji Seika Kaisha Ltd., 760 Morooka, Kohoku-ku, Yokohama, Kanagawa 222-8567, Japan

==References==
<references>
* <ref name="ref1">
Chujo T, Takai R, Akimoto-Tomiyama C, Ando S, Minami E, Nagamura Y, Kaku H,
Shibuya N, Yasuda M, Nakashita H, Umemura K, Okada A, Okada K, Nojiri H, Yamane
H. Involvement of the elicitor-induced gene OsWRKY53 in the expression of
defense-related genes in rice. Biochim Biophys Acta. 2007
Jul-Aug;1769(7-8):497-505. PubMed PMID: 17532485.

</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Os05g0343400

2017-03-06T15:18:50Z

Xysj2019:

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
===Function===
* '''''WRKY''''' proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.
* '''''WRKY''''' proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco.
* The rice genome is predicted to contain over 100 WRKY (OsWRKY)genes.
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''

===Phenotypic analysis===
* Overexpression of OsWRKY53 enhances resistance to rice blast fungus

===Expression===
* Northern hybridization revealed a significant increase in the level of '''''WRKY53''''' mRNA at 6 h after inoculation, after which it decreased gradually

Table 1
{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
* National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
* Department of Life Science, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, Kanagawa 216-0011, Japan
* Plant Acquired Immunity Research Unit, Discovery Research Institute, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
* Meiji Seika Kaisha Ltd., 760 Morooka, Kohoku-ku, Yokohama, Kanagawa 222-8567, Japan

==References==
<references>
* <ref name="ref1">
Chujo T, Takai R, Akimoto-Tomiyama C, Ando S, Minami E, Nagamura Y, Kaku H,
Shibuya N, Yasuda M, Nakashita H, Umemura K, Okada A, Okada K, Nojiri H, Yamane
H. Involvement of the elicitor-induced gene OsWRKY53 in the expression of
defense-related genes in rice. Biochim Biophys Acta. 2007
Jul-Aug;1769(7-8):497-505. PubMed PMID: 17532485.

</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Os05g0343400

2017-03-06T15:15:30Z

Xysj2019: /* References */

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
===Function===
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''
===Expression===

WRKY proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.WRKY proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco . The rice genome is predicted to contain over 100 Oryza sativa L.WRKY (OsWRKY)genes.
[[File:图片2.png|200px|thumb|right|Fig. 1]]
# cDNA cloning and expression analysis of OsWRKY53
A full-length cDNA of OsWRKY53 (AK121190) was isolated from elicited suspension-cultured rice cells by RT-PCR using primers that were designed based on information from a rice genome database. The nucleotide sequence of the OsWRKY53 cDNA reported in this paper will appear in the DNA Data Bank of Japan (DDBJ) nucleotide sequence database under the accession number AB190436.

OsWRKY53 belongs to group I, which is characterized by two WRKY domains that contain the Cys2His2 zinc finger-like motif.

To investigate the involvement of OsWRKY53 in defense responses to pathogen infection, examining its expression using Northern hybridization. The elicitor-induced changes in the steady-state levels of the OsWRKY53 mRNA in suspensioncultured rice cells are shown in Fig. 1a. The mRNA level peaked
0.5 h after the addition of each elicitor (chitin oligosaccharide and fungal cerebroside elicitors), and decreased gradually thereafter.
analyzing the expression pattern of OsWRKY53 in rice plants (cv. Nipponbare) inoculated with the fungal pathogen M. grisea race 007, which is compatible with cv. Nipponbare.

Northern hybridization revealed a significant increase in the level of OsWRKY53 mRNA at 6 h after inoculation, after which it decreased gradually (Fig. 1b).

2. Comparison of the OsWRKY53 sequence with other

homologous WRKY proteins and subcellular localization The OsWRKY53 amino acid sequence was compared with those of other known group-IWRKYproteins involved in defense responses (Fig. 2). OsWRKY53 showed similarity to PcWRKY1 from parsley (38% identity) [31] and AtWRKY33 from Arabidopsis
(43% identity). A putative nuclear localization signal was identified in the OsWRKY53 amino acid sequence, as in
PcWRKY1 and AtWRKY33, suggesting that OsWRKY53 localizes to the nucleus.

To investigate the subcellular localization of the OsWRKY53 protein, OsWRKY53 was fused in-frame to the sGFP reporter gene and subcloned into an expression vector under the control of the CaMV 35S promoter. This construct and a similar construct encoding sGFP alone were introduced into onion epidermal cells via particle bombardment. Onion cells expressing sGFP alone fluoresced throughout the cell. In contrast, cells transformed with a plasmid expressing the sGFP:OsWRKY53 fusion protein fluoresced mainly in the nuclei.

The TGAC core sequence(W-box elements) is essential for the sequence-specific binding activity
[[File:图片6.png|200px|thumb|right|]]
3. Transactivation of gene transcription by OsWRKY53

To investigate the function of OsWRKY53, we constructed an effector plasmid that contains the CaMV 35S promoter driving a gene that encodes a fusion protein of the DNA-binding domain of the yeast transcriptional activator GAL4 (GAL4 DB) and the full-length OsWRKY53. This plasmid, or a control plasmid encoding GAL4 DB alone, were cotransfected by particle bombardment into rice cells along with the reporter plasmid GAL4-LUC, which contains four copies of a GAL4 binding site fused to LUC. Compared with rice cells expressing GAL4 DB alone, those expressing the GAL4-OsWRKY53 fusion protein showed approximately 25-fold greater luciferase reporter activity.

[[File:图片7.png|200px|thumb|right|Fig. 6]]
4. Activation of defense-related genes in OsWRKY53-overexpressing transgenic rice

attempting to comprehensively identify genes upregulated in OsWRKY53-overexpressing transgenic rice cells using the Agilent Rice Oligo Microarray, which contains more than 21,000 rice genes. Total RNA samples were prepared from three independent lines of OsWRKY53-overexpressing transgenic rice cells (lines A, C, and E in Fig. 6) and used for microarray analysis. A total of 221 genes were upregulated in the OsWRKY53-overexpressing transgenic rice cells. One third of the upregulated genes are of unknown function, and the other two thirds include genes likely to be related to metabolism,regulation of gene expression, defense, transport, proteolysis,and signal transduction. Another microarray analysis revealed that 102 of the 221 genes were upregulated by chitin oligosaccharide elicitor treatment (data not shown). Table 1 shows the nine most-upregulated defenserelated genes in the OsWRKY53-overexpressing transgenic rice cells. Of these nine genes, six (PBZ1 (AK071613), a PR-14 gene encoding a putative lipid transfer protein (AK058896), Chitinase1 (AK073267), PR-5 (AK111104), Chitinase 2 (AK102505), and Peroxidase (AK102307)) are chitin oligosaccharide-inducible.
The upregulation of these six genes in five independent OsWRKY53-overexpressing transgenic rice lines was demonstrated using real time RT-PCR.

Table 1
{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}
a Each value represents the geometric mean of ratios obtained by three
microarray analyses.
b Plus (+) and minus (−) represent the chitin oligosaccharide elicitor inducible
and non-inducible genes identified by microarray analyses using the total RNA
extracted from the rice cells harvested at 2 h after elicitor treatment.

[[File:图片8.png|200px|thumb|right|Fig.7]]
5. Overexpression of OsWRKY53 enhances resistance to rice blast fungus

To investigate the function of OsWRKY53 during defense responses to pathogen infection, 35S-OsWRKY53 transgenic rice plants was generated , obtaining 11 transgenic lines. RNA gel blot analysis revealed that OsWRKY53 is substantially elevated in at least six independent 35S-OsWRKY53 lines (Fig. 7a). The growth and morphology of the transgenic rice plants overexpressing OsWRKY53 were similar to those of normal-type rice plants (data not shown).To determine the contribution of OsWRKY53 to disease resistance in rice, the resistance of the transgenic plants to the fungal pathogen M. grisea race 007 was examined . As control plants, using both the wild type and 35S-OsWRKY53 transgenic rice plants inwhich the level of OsWRKY53mRNAwas not elevated. Infected leaves of the control plants developed typical disease symptoms. In contrast, most OsWRKY53-overexpressing plants showed greatly reduced symptom levels (Fig. 7b).

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
* National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
* Department of Life Science, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, Kanagawa 216-0011, Japan
* Plant Acquired Immunity Research Unit, Discovery Research Institute, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
* Meiji Seika Kaisha Ltd., 760 Morooka, Kohoku-ku, Yokohama, Kanagawa 222-8567, Japan

==References==
<references>
* <ref name="ref1">
Chujo T, Takai R, Akimoto-Tomiyama C, Ando S, Minami E, Nagamura Y, Kaku H,
Shibuya N, Yasuda M, Nakashita H, Umemura K, Okada A, Okada K, Nojiri H, Yamane
H. Involvement of the elicitor-induced gene OsWRKY53 in the expression of
defense-related genes in rice. Biochim Biophys Acta. 2007
Jul-Aug;1769(7-8):497-505. PubMed PMID: 17532485.

</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Os05g0343400

2017-03-06T15:14:42Z

Xysj2019: /* Labs working on this gene */

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
===Function===
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''
===Expression===

WRKY proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.WRKY proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco . The rice genome is predicted to contain over 100 Oryza sativa L.WRKY (OsWRKY)genes.
[[File:图片2.png|200px|thumb|right|Fig. 1]]
# cDNA cloning and expression analysis of OsWRKY53
A full-length cDNA of OsWRKY53 (AK121190) was isolated from elicited suspension-cultured rice cells by RT-PCR using primers that were designed based on information from a rice genome database. The nucleotide sequence of the OsWRKY53 cDNA reported in this paper will appear in the DNA Data Bank of Japan (DDBJ) nucleotide sequence database under the accession number AB190436.

OsWRKY53 belongs to group I, which is characterized by two WRKY domains that contain the Cys2His2 zinc finger-like motif.

To investigate the involvement of OsWRKY53 in defense responses to pathogen infection, examining its expression using Northern hybridization. The elicitor-induced changes in the steady-state levels of the OsWRKY53 mRNA in suspensioncultured rice cells are shown in Fig. 1a. The mRNA level peaked
0.5 h after the addition of each elicitor (chitin oligosaccharide and fungal cerebroside elicitors), and decreased gradually thereafter.
analyzing the expression pattern of OsWRKY53 in rice plants (cv. Nipponbare) inoculated with the fungal pathogen M. grisea race 007, which is compatible with cv. Nipponbare.

Northern hybridization revealed a significant increase in the level of OsWRKY53 mRNA at 6 h after inoculation, after which it decreased gradually (Fig. 1b).

2. Comparison of the OsWRKY53 sequence with other

homologous WRKY proteins and subcellular localization The OsWRKY53 amino acid sequence was compared with those of other known group-IWRKYproteins involved in defense responses (Fig. 2). OsWRKY53 showed similarity to PcWRKY1 from parsley (38% identity) [31] and AtWRKY33 from Arabidopsis
(43% identity). A putative nuclear localization signal was identified in the OsWRKY53 amino acid sequence, as in
PcWRKY1 and AtWRKY33, suggesting that OsWRKY53 localizes to the nucleus.

To investigate the subcellular localization of the OsWRKY53 protein, OsWRKY53 was fused in-frame to the sGFP reporter gene and subcloned into an expression vector under the control of the CaMV 35S promoter. This construct and a similar construct encoding sGFP alone were introduced into onion epidermal cells via particle bombardment. Onion cells expressing sGFP alone fluoresced throughout the cell. In contrast, cells transformed with a plasmid expressing the sGFP:OsWRKY53 fusion protein fluoresced mainly in the nuclei.

The TGAC core sequence(W-box elements) is essential for the sequence-specific binding activity
[[File:图片6.png|200px|thumb|right|]]
3. Transactivation of gene transcription by OsWRKY53

To investigate the function of OsWRKY53, we constructed an effector plasmid that contains the CaMV 35S promoter driving a gene that encodes a fusion protein of the DNA-binding domain of the yeast transcriptional activator GAL4 (GAL4 DB) and the full-length OsWRKY53. This plasmid, or a control plasmid encoding GAL4 DB alone, were cotransfected by particle bombardment into rice cells along with the reporter plasmid GAL4-LUC, which contains four copies of a GAL4 binding site fused to LUC. Compared with rice cells expressing GAL4 DB alone, those expressing the GAL4-OsWRKY53 fusion protein showed approximately 25-fold greater luciferase reporter activity.

[[File:图片7.png|200px|thumb|right|Fig. 6]]
4. Activation of defense-related genes in OsWRKY53-overexpressing transgenic rice

attempting to comprehensively identify genes upregulated in OsWRKY53-overexpressing transgenic rice cells using the Agilent Rice Oligo Microarray, which contains more than 21,000 rice genes. Total RNA samples were prepared from three independent lines of OsWRKY53-overexpressing transgenic rice cells (lines A, C, and E in Fig. 6) and used for microarray analysis. A total of 221 genes were upregulated in the OsWRKY53-overexpressing transgenic rice cells. One third of the upregulated genes are of unknown function, and the other two thirds include genes likely to be related to metabolism,regulation of gene expression, defense, transport, proteolysis,and signal transduction. Another microarray analysis revealed that 102 of the 221 genes were upregulated by chitin oligosaccharide elicitor treatment (data not shown). Table 1 shows the nine most-upregulated defenserelated genes in the OsWRKY53-overexpressing transgenic rice cells. Of these nine genes, six (PBZ1 (AK071613), a PR-14 gene encoding a putative lipid transfer protein (AK058896), Chitinase1 (AK073267), PR-5 (AK111104), Chitinase 2 (AK102505), and Peroxidase (AK102307)) are chitin oligosaccharide-inducible.
The upregulation of these six genes in five independent OsWRKY53-overexpressing transgenic rice lines was demonstrated using real time RT-PCR.

Table 1
{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}
a Each value represents the geometric mean of ratios obtained by three
microarray analyses.
b Plus (+) and minus (−) represent the chitin oligosaccharide elicitor inducible
and non-inducible genes identified by microarray analyses using the total RNA
extracted from the rice cells harvested at 2 h after elicitor treatment.

[[File:图片8.png|200px|thumb|right|Fig.7]]
5. Overexpression of OsWRKY53 enhances resistance to rice blast fungus

To investigate the function of OsWRKY53 during defense responses to pathogen infection, 35S-OsWRKY53 transgenic rice plants was generated , obtaining 11 transgenic lines. RNA gel blot analysis revealed that OsWRKY53 is substantially elevated in at least six independent 35S-OsWRKY53 lines (Fig. 7a). The growth and morphology of the transgenic rice plants overexpressing OsWRKY53 were similar to those of normal-type rice plants (data not shown).To determine the contribution of OsWRKY53 to disease resistance in rice, the resistance of the transgenic plants to the fungal pathogen M. grisea race 007 was examined . As control plants, using both the wild type and 35S-OsWRKY53 transgenic rice plants inwhich the level of OsWRKY53mRNAwas not elevated. Infected leaves of the control plants developed typical disease symptoms. In contrast, most OsWRKY53-overexpressing plants showed greatly reduced symptom levels (Fig. 7b).

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
* National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
* Department of Life Science, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, Kanagawa 216-0011, Japan
* Plant Acquired Immunity Research Unit, Discovery Research Institute, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
* Meiji Seika Kaisha Ltd., 760 Morooka, Kohoku-ku, Yokohama, Kanagawa 222-8567, Japan

==References==

1. Tetsuya Chujo;Ryota Takai;Chiharu Akimoto-Tomiyama;Sugihiro Ando;Eiichi Minami;Yoshiaki Nagamura;Hanae Kaku;Naoto Shibuya;Michiko Yasuda;Hideo Nakashita;Kenji Umemura;Atsushi Okada;Kazunori Okada;Hideaki Nojiri;Hisakazu Yamane(2007). "Involvement of the elicitor-induced gene OsWRKY53 in the expression of defense-related genes in rice." Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1769(7–8): 497-505.

2. Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.

3. Tetsuya Chujo;Naho Sugioka;Yuka Masuda;Naoto Shibuya;Tetsuo Takemura;Kazunori Okada;Hideaki Nojiri;Hisakazu Yamane(2009). "Promoter analysis of the elicitor-induced WRKY gene OsWRKY53, which is involved in defense responses in rice." Biosci Biotechnol Biochem 73(8): 1901-1904.

4. Zhen Xie;Zhong-Lin Zhang;Xiaolu Zou;Jie Huang;Paul Ruas;Daniel Thompson;Qingxi J. Shen (2005). "Annotations and Functional Analyses of the Rice WRKY Gene Superfamily Reveal Positive and Negative Regulators of Abscisic Acid Signaling in Aleurone Cells." Plant Physiology 137(1): 176-189.

5. Ramamoorthy Rengasamy;Jiang Shu-YeKumar Nadimuthu;Venkatesh Prasanna Nori;Ramachandran Srinivasan (2008). "A Comprehensive Transcriptional Profiling of the WRKY Gene Family in Rice Under Various Abiotic and Phytohormone Treatments." Plant and Cell Physiology 49(6): 865-879.

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Os05g0343400

2017-03-06T15:13:52Z

Xysj2019:

The rice '''''Os05g0343400''''' was reported as '''''OsWRKY53''''' in 2007 <ref name="ref1" /> by researchers from Japan.
===Function===
* '''''OsWRKY53''''' is a common transcription factor in the signal transduction pathways triggered by both chitin oligosaccharide and fungal cerebroside elicitors.
* '''''OsWRKY53''''' is a transcription factor that plays important roles in elicitor-induced defense signaling pathways in rice.
===Gene Symbol===
*'''''Os05g0343400''''' '''''<=>''''' '''''OsWRKY53''''','''''WRKY53'''''
===Expression===

WRKY proteins form a large family of plant-specific transcription factors that specifically bind to the W-box elements (T)TGAC(C/T) and appear to play a regulatory role in a variety of stress responses.WRKY proteins have been investigated extensively for their possible involvement in defense responses against attacks by pathogens, mainly in dicotyledonous plants such as Arabidopsis and tobacco . The rice genome is predicted to contain over 100 Oryza sativa L.WRKY (OsWRKY)genes.
[[File:图片2.png|200px|thumb|right|Fig. 1]]
# cDNA cloning and expression analysis of OsWRKY53
A full-length cDNA of OsWRKY53 (AK121190) was isolated from elicited suspension-cultured rice cells by RT-PCR using primers that were designed based on information from a rice genome database. The nucleotide sequence of the OsWRKY53 cDNA reported in this paper will appear in the DNA Data Bank of Japan (DDBJ) nucleotide sequence database under the accession number AB190436.

OsWRKY53 belongs to group I, which is characterized by two WRKY domains that contain the Cys2His2 zinc finger-like motif.

To investigate the involvement of OsWRKY53 in defense responses to pathogen infection, examining its expression using Northern hybridization. The elicitor-induced changes in the steady-state levels of the OsWRKY53 mRNA in suspensioncultured rice cells are shown in Fig. 1a. The mRNA level peaked
0.5 h after the addition of each elicitor (chitin oligosaccharide and fungal cerebroside elicitors), and decreased gradually thereafter.
analyzing the expression pattern of OsWRKY53 in rice plants (cv. Nipponbare) inoculated with the fungal pathogen M. grisea race 007, which is compatible with cv. Nipponbare.

Northern hybridization revealed a significant increase in the level of OsWRKY53 mRNA at 6 h after inoculation, after which it decreased gradually (Fig. 1b).

2. Comparison of the OsWRKY53 sequence with other

homologous WRKY proteins and subcellular localization The OsWRKY53 amino acid sequence was compared with those of other known group-IWRKYproteins involved in defense responses (Fig. 2). OsWRKY53 showed similarity to PcWRKY1 from parsley (38% identity) [31] and AtWRKY33 from Arabidopsis
(43% identity). A putative nuclear localization signal was identified in the OsWRKY53 amino acid sequence, as in
PcWRKY1 and AtWRKY33, suggesting that OsWRKY53 localizes to the nucleus.

To investigate the subcellular localization of the OsWRKY53 protein, OsWRKY53 was fused in-frame to the sGFP reporter gene and subcloned into an expression vector under the control of the CaMV 35S promoter. This construct and a similar construct encoding sGFP alone were introduced into onion epidermal cells via particle bombardment. Onion cells expressing sGFP alone fluoresced throughout the cell. In contrast, cells transformed with a plasmid expressing the sGFP:OsWRKY53 fusion protein fluoresced mainly in the nuclei.

The TGAC core sequence(W-box elements) is essential for the sequence-specific binding activity
[[File:图片6.png|200px|thumb|right|]]
3. Transactivation of gene transcription by OsWRKY53

To investigate the function of OsWRKY53, we constructed an effector plasmid that contains the CaMV 35S promoter driving a gene that encodes a fusion protein of the DNA-binding domain of the yeast transcriptional activator GAL4 (GAL4 DB) and the full-length OsWRKY53. This plasmid, or a control plasmid encoding GAL4 DB alone, were cotransfected by particle bombardment into rice cells along with the reporter plasmid GAL4-LUC, which contains four copies of a GAL4 binding site fused to LUC. Compared with rice cells expressing GAL4 DB alone, those expressing the GAL4-OsWRKY53 fusion protein showed approximately 25-fold greater luciferase reporter activity.

[[File:图片7.png|200px|thumb|right|Fig. 6]]
4. Activation of defense-related genes in OsWRKY53-overexpressing transgenic rice

attempting to comprehensively identify genes upregulated in OsWRKY53-overexpressing transgenic rice cells using the Agilent Rice Oligo Microarray, which contains more than 21,000 rice genes. Total RNA samples were prepared from three independent lines of OsWRKY53-overexpressing transgenic rice cells (lines A, C, and E in Fig. 6) and used for microarray analysis. A total of 221 genes were upregulated in the OsWRKY53-overexpressing transgenic rice cells. One third of the upregulated genes are of unknown function, and the other two thirds include genes likely to be related to metabolism,regulation of gene expression, defense, transport, proteolysis,and signal transduction. Another microarray analysis revealed that 102 of the 221 genes were upregulated by chitin oligosaccharide elicitor treatment (data not shown). Table 1 shows the nine most-upregulated defenserelated genes in the OsWRKY53-overexpressing transgenic rice cells. Of these nine genes, six (PBZ1 (AK071613), a PR-14 gene encoding a putative lipid transfer protein (AK058896), Chitinase1 (AK073267), PR-5 (AK111104), Chitinase 2 (AK102505), and Peroxidase (AK102307)) are chitin oligosaccharide-inducible.
The upregulation of these six genes in five independent OsWRKY53-overexpressing transgenic rice lines was demonstrated using real time RT-PCR.

Table 1
{|class="wikitable"
|+Up-regulated defense-related genes in OsWRKY53-overexpressing transgenic rice cells
|-
|Accession no.
|Annotation
|Fold change a
|Chitin oligosaccharide elicitor response b
|-
|AK071613
|PR-10 (PBZ1)
|6.92
| +
|-
|AK058896
|PR-14
|6.06
| +
|-
|AK058921
|PR-14
|5.98
| −
|-
|AK073267
|chitinase
|5.30
| +
|-
|AK073978
|peroxidase
|4.18
| −
|-
|AK111104
|PR -5
|3.97
| +
|-
|AK102505
|chitinase
|3.67
| +
|-
|AK102307
|peroxidase
|3.56
| +
|-
|AK063935
|cinnamoyl CoA reductase
|2.74
| −
|}
a Each value represents the geometric mean of ratios obtained by three
microarray analyses.
b Plus (+) and minus (−) represent the chitin oligosaccharide elicitor inducible
and non-inducible genes identified by microarray analyses using the total RNA
extracted from the rice cells harvested at 2 h after elicitor treatment.

[[File:图片8.png|200px|thumb|right|Fig.7]]
5. Overexpression of OsWRKY53 enhances resistance to rice blast fungus

To investigate the function of OsWRKY53 during defense responses to pathogen infection, 35S-OsWRKY53 transgenic rice plants was generated , obtaining 11 transgenic lines. RNA gel blot analysis revealed that OsWRKY53 is substantially elevated in at least six independent 35S-OsWRKY53 lines (Fig. 7a). The growth and morphology of the transgenic rice plants overexpressing OsWRKY53 were similar to those of normal-type rice plants (data not shown).To determine the contribution of OsWRKY53 to disease resistance in rice, the resistance of the transgenic plants to the fungal pathogen M. grisea race 007 was examined . As control plants, using both the wild type and 35S-OsWRKY53 transgenic rice plants inwhich the level of OsWRKY53mRNAwas not elevated. Infected leaves of the control plants developed typical disease symptoms. In contrast, most OsWRKY53-overexpressing plants showed greatly reduced symptom levels (Fig. 7b).

===Subcellular localization===
* '''''Os05g0343400''''' localizes to the nucleus and activates the expression of defense-related genes.
===Evolution===
[[File:图片3.png|200px|thumb|left|figure 2.]]
[[File:图片4.png|200px|thumb|right|figure 2.(continued)]]
WRKY proteins can possess one or more WRKY domains and, as with other transcription factors, the nature of the DNA-binding domain forms a basis for categorizing different members of the WRKY family. WRKY proteins containing a single WRKY domain are group II proteins; those with two are group I. The group II WRKY proteins are further subdivided intosubgroups a–e based on the presence of short conserved structural motifs . A third group, group III, contains a single WRKY domain with a variant zinc-finger CX7CX23HXC. Compared with domains from groups Ia and II proteins, the terminal histidine of the zinc-finger of groups Ib and III is replaced with cysteine and the spacing is altered within group III. Group IV WRKY proteins contain the WRKY motif, but lack a complete zinc-finger.

numerous WRKY gene duplications occurred after the divergence of the monocotyledons from dicotyledons some 50–80 million years ago. Early origin for the WRKY family in primitive eukaryotes, before the emergence of the plant phyla, and its gross expansion during the course of plant evolutionary radiation, likely because of selective pressures favoring greater adaptability. Group I WRKY genes represent the ancestral form, with other groups arising later through losses and gains of a WRKY domain, and that this family originated some 1.8–2 billion years ago. the C-terminal domains are required for DNA-binding activity, thus are constrained in their ability to mutate without losing function, whereas the N-terminal domains mediate protein-protein interactions and may be less functionally constrained . group Ia genes arose from a fusion of two group II WRKY genes evolved at an early time.<ref>Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.</ref>

==Labs working on this gene==
1. Rice Functional Genomics Group, Temasek Life Sciences Laboratory
2. Key Laboratory of Horticultural Plant Biology of Ministry of Education, National Indoor Conservation Center of Virus-free Gemplasms of Fruit Crops
3. Biotechnology Research Center, The University of Tokyo

==References==

1. Tetsuya Chujo;Ryota Takai;Chiharu Akimoto-Tomiyama;Sugihiro Ando;Eiichi Minami;Yoshiaki Nagamura;Hanae Kaku;Naoto Shibuya;Michiko Yasuda;Hideo Nakashita;Kenji Umemura;Atsushi Okada;Kazunori Okada;Hideaki Nojiri;Hisakazu Yamane(2007). "Involvement of the elicitor-induced gene OsWRKY53 in the expression of defense-related genes in rice." Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1769(7–8): 497-505.

2. Christian A. Ross;Yue Liu;Qingxi J. Shen (2007). "The WRKY Gene Family in Rice (Oryza sativa)." Journal of Integrative Plant Biology 49(6): 827-842.

3. Tetsuya Chujo;Naho Sugioka;Yuka Masuda;Naoto Shibuya;Tetsuo Takemura;Kazunori Okada;Hideaki Nojiri;Hisakazu Yamane(2009). "Promoter analysis of the elicitor-induced WRKY gene OsWRKY53, which is involved in defense responses in rice." Biosci Biotechnol Biochem 73(8): 1901-1904.

4. Zhen Xie;Zhong-Lin Zhang;Xiaolu Zou;Jie Huang;Paul Ruas;Daniel Thompson;Qingxi J. Shen (2005). "Annotations and Functional Analyses of the Rice WRKY Gene Superfamily Reveal Positive and Negative Regulators of Abscisic Acid Signaling in Aleurone Cells." Plant Physiology 137(1): 176-189.

5. Ramamoorthy Rengasamy;Jiang Shu-YeKumar Nadimuthu;Venkatesh Prasanna Nori;Ramachandran Srinivasan (2008). "A Comprehensive Transcriptional Profiling of the WRKY Gene Family in Rice Under Various Abiotic and Phytohormone Treatments." Plant and Cell Physiology 49(6): 865-879.

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

Test

2017-03-06T15:07:05Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|629
|''QHB''
|[[Os01g0854500]]
|10.1046/j.1365-313X.2003.01816.x
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|632
|''OsSBP''
|[[Os01g0916400]]
|10.1271/bbb.68.873
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|640
|''LRK1''
|[[Os02g0154200]]
|10.1111/j.1467-7652.2009.00428.x
|
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|643
|''CYP734A2''
|[[Os02g0204700]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|644
|''OsHPL2''
|[[Os02g0218700]]
|10.1111/j.1365-313X.2009.04031.x
|
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|660
|''OsDof12''
|[[Os03g0169600]]
|10.1007/s00425-009-0893-7
|
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|664
|''OsAOS2''
|[[Os03g0225900]]
|10.1094/MPMI-19-1127
|
|-
|665
|''RPN10''
|[[Os03g0243300]]
|10.5511/plantbiotechnology.21.233
|
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|670
|''OsEIL1''
|[[Os03g0324300]]
|10.1007/s11103-005-6184-1
|
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|673
|''OsIRO3''
|[[Os03g0379300]]
|10.1186/1471-2229-10-166
|
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|Finished
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|Annotated
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Test

2017-03-06T15:06:12Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|629
|''QHB''
|[[Os01g0854500]]
|10.1046/j.1365-313X.2003.01816.x
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|632
|''OsSBP''
|[[Os01g0916400]]
|10.1271/bbb.68.873
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|640
|''LRK1''
|[[Os02g0154200]]
|10.1111/j.1467-7652.2009.00428.x
|
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|643
|''CYP734A2''
|[[Os02g0204700]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|644
|''OsHPL2''
|[[Os02g0218700]]
|10.1111/j.1365-313X.2009.04031.x
|
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|660
|''OsDof12''
|[[Os03g0169600]]
|10.1007/s00425-009-0893-7
|
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|664
|''OsAOS2''
|[[Os03g0225900]]
|10.1094/MPMI-19-1127
|
|-
|665
|''RPN10''
|[[Os03g0243300]]
|10.5511/plantbiotechnology.21.233
|
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|670
|''OsEIL1''
|[[Os03g0324300]]
|10.1007/s11103-005-6184-1
|
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|673
|''OsIRO3''
|[[Os03g0379300]]
|10.1186/1471-2229-10-166
|
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|Finished
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|Annotated
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Os04g0673300

2017-03-06T15:05:25Z

Xysj2019:

The rice '''''Os04g0673300''''' was reported as '''''OsRR6''''' in 2006 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0673300''''' '''''<=>''''' '''''OsRR6, rr6, Rra6, OsRRA6'''''

===Function===
* '''''OsRR6''''' is a kind of CK-inducible type-A response regulator[2].The type-A response regulators are relatively small, containing a receiver domain along with short N- and C-terminal extensions.
* '''''OsRR6''''' may play an important role in abiotic stress signaling in rice, besides acting as a component in cytokinin signaling[ <ref name="ref1" />.

[[File:Fig1.png|300px|thumb|left|Fig.1]]
The induction of OsRR6 by different abiotic stress stimuli provides a molecular link between stress and cytokinin signaling as well <ref name="ref1" />.

Overexpression of OsRR6 also affected the expression of CK-responsive genes[2].

OsRR6-ox plants displayed altered morphologies and changes in CK metabolism, probably due to changes in the gene regulatory network <ref name="ref2" />.

'''Fig.1''': Changes in transcript levels of the OsRR6 gene in response to different stress treatments. The transcript levels of OsRR6 gene in 6-day-old light-grown seedlings treated with ABA, NaCl, mannitol and cold for 6 h, were plotted as the relative expression (fold) of the seedlings mock-treated for the same duration.

Generated transgenic rice plants that overexpress OsRR6 (OsRR6-ox) by fusing its coding sequence to the rice actin1 (Act1) promoter, because this promoter generally produces much higher levels of constitutive expression in rice than the cauliflower mosaic virus(CaMV) 35S promoter. Callus transformed with Act1::OsRR6 showed severe retardation of shoot regeneration compared with callus transformed with a control vector (Fig. 2)[2].
[[File:Fig2.png|300px|thumb|left|Fig.2]]

'''Fig.2''': OsRR6 represses shoot regeneration in rice callus. Callus was transformed with Agrobacterium carrying a binary vector pActnos/Hmz (Vec.), Act1::OsRR6 (OsRR6) or Act1::OsRR6D103E (OsRR6D103E). Calli were selected with hygromycin B and grown on regeneration agar plates for 6 weeks.

Moreover, each of 20 OsRR6D103E-ox independent lines was indistinguishable from plants transformed with a control vector (control plants; Fig. 3A, B). These results support the hypothesis that growth defects associated with OsRR6 overexpression are due to a requirement for phosphorylation of OsRR6[2].
[[File:Fig3.png|300px|thumb|left|Fig.3]]

'''Fig.3''': Morphologies of transgenic plants overexpressing OsRR6. OsRR6-ox transgenic plants (T0 generation) were grown on MS-agar plates containing hygromycin B for 7 d, and then hydroponically grown for 75 d. Transgenic plants, transformed with vector pActnos/Hmz (Vec.) or Act1::OsRR6D103E (OsRR6D103E-ox), were also grown under the same conditions. The typical phenotype of each transgenic line and their panicles are shown in (A) and (B). Total RNA samples were prepared from the shoots of each transgenic plant. (C) Semiquantitative RT–PCR analysis of the OsRR6 gene in the transgenic lines. OsAct1 is an extraction and loading control.

Future analyses of knockout or RNA interference mutants of OsRR6 will enable us to define further its possible participation in stress responses.

===Expression===
* The expression of a majority of OsRR genes was not significantly altered under stress, with the notable exception of OsRR6. The expression of OsRR6 gene was induced to significant levels by salt, dehydration and low temperature treatments (Fig. 1), and results were reproducible.

OsRR6 is found as repeats on the top arm of chromosome 4. This area of chromosome 4 is included in a segmental duplication with a region on the upper arm of chromosome 2 (Fig. 4)[4].
[[File:Fig4.png|300px|thumb|right|Fig.4]]

'''Fig.4''':Locations and duplications of putative cytokinin two-component regulators in the rice chromosomes (cv. Nipponbare). Ovals on the chromosomes represent centromeres.

The OsRR genes express differentially in various organs examined, and also in response to light[1]. Most of the OsRR genes were expressed at relatively higher level in mature tissues (leaves and flowers).The majority of the type-A OsRR genes (OsRR2–9 and OsRR11) were expressed at various levels in roots, stems, leaves, and spikelets (Fig.5)([4]. OsRR6 was expressed mostly in roots and leaves.

The transcript levels of OsRR2, 3, 4, 6, 7,and 9 were significantly higher in etiolated seedlings as compared to green seedlings (Fig. 6)[4].
[[File:Fig5.png|300px|thumb|right|Fig.5]]

'''Fig.5''':The analysis of the response of the system genes family to cytokinin by RT-PCR. RNA was isolated from roots and leaves from Nipponbare rice growing in liquid nutrient medium either with 1 μM 6-benzylaminopurine (6-BA) for 4 h or with no 6-BA. OsACTIN primers were used as a template control.

===Evolution===
* The type-A RRs are mainly composed of a receiver domain with short N- and C-terminal extensions [2], essentially similar to the E. coli response regulator (RR) CheY involved in chemotaxis, and lack a typical output domain(3). All the OsRR proteins also contain the highly conserved Lys and two Asp residues (D-D-K) in the receiver domain (Fig. 7B, C).However, OsRR6 and OsRR7 have N-terminal extensions rich in gly and asp residues (Fig. 7C). These N- and C-terminal variable regions may play a role in their localization to different cellular compartments.No homolog of OsRR6 was found within the duplicated region, suggesting the involvement of gene loss or more localized duplications[4].

OsRR6 were found as repeats on the top arm of chromosome 4. This area of chromosome 4 is included in a segmental duplication with a region on the upper arm of chromosome 2 that contains the OsRR11 gene [4](Fig. 4).

You can also add sub-section(s) at will.

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, Benito
Juarez Road, New Delhi-110021, India

==References==
<references>
* <ref name="ref1">
Jain M, Tyagi AK, Khurana JP. Molecular characterization and differential
expression of cytokinin-responsive type-A response regulators in rice (Oryza
sativa). BMC Plant Biol. 2006 Feb 13;6:1. PubMed PMID: 16472405; PubMed Central
PMCID: PMC1382228.
</ref>
* <ref name="ref2">
Hirose N, Makita N, Kojima M, Kamada-Nobusada T, Sakakibara H. Overexpression
of a type-A response regulator alters rice morphology and cytokinin metabolism.
Plant Cell Physiol. 2007 Mar;48(3):523-39. PubMed PMID: 17293362.
</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 4]]
[[Category:Chromosome 4]]

Os04g0673300

2017-03-06T15:03:26Z

Xysj2019:

The rice '''''Os04g0673300''''' was reported as '''''OsRR6''''' in 2006 <ref name="ref1" /> by researchers from India.

==Annotated Information==
===Gene Symbol===
*'''''Os04g0673300''''' '''''<=>''''' '''''OsRR6, rr6, Rra6, OsRRA6'''''

===Function===
* '''''OsRR6''''' is a kind of CK-inducible type-A response regulator[2].The type-A response regulators are relatively small, containing a receiver domain along with short N- and C-terminal extensions.
* '''''OsRR6''''' may play an important role in abiotic stress signaling in rice, besides acting as a component in cytokinin signaling[1].

[[File:Fig1.png|300px|thumb|left|Fig.1]]
The induction of OsRR6 by different abiotic stress stimuli provides a molecular link between stress and cytokinin signaling as well[1].

Overexpression of OsRR6 also affected the expression of CK-responsive genes[2].

OsRR6-ox plants displayed altered morphologies and changes in CK metabolism, probably due to changes in the gene regulatory network[2].

'''Fig.1''': Changes in transcript levels of the OsRR6 gene in response to different stress treatments. The transcript levels of OsRR6 gene in 6-day-old light-grown seedlings treated with ABA, NaCl, mannitol and cold for 6 h, were plotted as the relative expression (fold) of the seedlings mock-treated for the same duration.

Generated transgenic rice plants that overexpress OsRR6 (OsRR6-ox) by fusing its coding sequence to the rice actin1 (Act1) promoter, because this promoter generally produces much higher levels of constitutive expression in rice than the cauliflower mosaic virus(CaMV) 35S promoter. Callus transformed with Act1::OsRR6 showed severe retardation of shoot regeneration compared with callus transformed with a control vector (Fig. 2)[2].
[[File:Fig2.png|300px|thumb|left|Fig.2]]

'''Fig.2''': OsRR6 represses shoot regeneration in rice callus. Callus was transformed with Agrobacterium carrying a binary vector pActnos/Hmz (Vec.), Act1::OsRR6 (OsRR6) or Act1::OsRR6D103E (OsRR6D103E). Calli were selected with hygromycin B and grown on regeneration agar plates for 6 weeks.

Moreover, each of 20 OsRR6D103E-ox independent lines was indistinguishable from plants transformed with a control vector (control plants; Fig. 3A, B). These results support the hypothesis that growth defects associated with OsRR6 overexpression are due to a requirement for phosphorylation of OsRR6[2].
[[File:Fig3.png|300px|thumb|left|Fig.3]]

'''Fig.3''': Morphologies of transgenic plants overexpressing OsRR6. OsRR6-ox transgenic plants (T0 generation) were grown on MS-agar plates containing hygromycin B for 7 d, and then hydroponically grown for 75 d. Transgenic plants, transformed with vector pActnos/Hmz (Vec.) or Act1::OsRR6D103E (OsRR6D103E-ox), were also grown under the same conditions. The typical phenotype of each transgenic line and their panicles are shown in (A) and (B). Total RNA samples were prepared from the shoots of each transgenic plant. (C) Semiquantitative RT–PCR analysis of the OsRR6 gene in the transgenic lines. OsAct1 is an extraction and loading control.

Future analyses of knockout or RNA interference mutants of OsRR6 will enable us to define further its possible participation in stress responses.

===Expression===
* The expression of a majority of OsRR genes was not significantly altered under stress, with the notable exception of OsRR6. The expression of OsRR6 gene was induced to significant levels by salt, dehydration and low temperature treatments (Fig. 1), and results were reproducible.

OsRR6 is found as repeats on the top arm of chromosome 4. This area of chromosome 4 is included in a segmental duplication with a region on the upper arm of chromosome 2 (Fig. 4)[4].
[[File:Fig4.png|300px|thumb|right|Fig.4]]

'''Fig.4''':Locations and duplications of putative cytokinin two-component regulators in the rice chromosomes (cv. Nipponbare). Ovals on the chromosomes represent centromeres.

The OsRR genes express differentially in various organs examined, and also in response to light[1]. Most of the OsRR genes were expressed at relatively higher level in mature tissues (leaves and flowers).The majority of the type-A OsRR genes (OsRR2–9 and OsRR11) were expressed at various levels in roots, stems, leaves, and spikelets (Fig.5)([4]. OsRR6 was expressed mostly in roots and leaves.

The transcript levels of OsRR2, 3, 4, 6, 7,and 9 were significantly higher in etiolated seedlings as compared to green seedlings (Fig. 6)[4].
[[File:Fig5.png|300px|thumb|right|Fig.5]]

'''Fig.5''':The analysis of the response of the system genes family to cytokinin by RT-PCR. RNA was isolated from roots and leaves from Nipponbare rice growing in liquid nutrient medium either with 1 μM 6-benzylaminopurine (6-BA) for 4 h or with no 6-BA. OsACTIN primers were used as a template control.

===Evolution===
* The type-A RRs are mainly composed of a receiver domain with short N- and C-terminal extensions [2], essentially similar to the E. coli response regulator (RR) CheY involved in chemotaxis, and lack a typical output domain(3). All the OsRR proteins also contain the highly conserved Lys and two Asp residues (D-D-K) in the receiver domain (Fig. 7B, C).However, OsRR6 and OsRR7 have N-terminal extensions rich in gly and asp residues (Fig. 7C). These N- and C-terminal variable regions may play a role in their localization to different cellular compartments.No homolog of OsRR6 was found within the duplicated region, suggesting the involvement of gene loss or more localized duplications[4].

OsRR6 were found as repeats on the top arm of chromosome 4. This area of chromosome 4 is included in a segmental duplication with a region on the upper arm of chromosome 2 that contains the OsRR11 gene [4](Fig. 4).

You can also add sub-section(s) at will.

==Labs working on this gene==
* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, Benito
Juarez Road, New Delhi-110021, India

==References==

1. Mukesh Jain, Akhilesh K Tyagi: Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa)BMC Plant Biology 2006, 6:1

2.Hirose N, Makita N, Kojima M, Kamada-Nobusada T, et al. Overexpression of a type-A response regulator alters rice morphology and cytokinin metabolism. Plant Cell Physiol. 2007,48: 523-539.

3.Imamura A, Hanaki N, Umeda H, Nakamura A, Suzuki T, Ueguchi C, Mizuno T: Response regulators implicated in His-to-Asp phosphotransfer signaling in Arabidopsis. Proc Natl Acad Sci USA 1998,95:2691-2696

4.Liming Du, Fangchan Jiao, Jun Chu:The two-component signal system in rice (Oryza sativa L.): A genome-wide study of cytokinin signal perception and transduction.Genomics 2007,89: 697–707

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 4]]
[[Category:Chromosome 4]]

Os04g0673300

2017-03-06T14:56:53Z

Xysj2019:

Please input one-sentence summary here.
OsRR6 is a kind of CK-inducible type-A response regulator in rice[2].
==Annotated Information==
===Function===

OsRR6 is a kind of CK-inducible type-A response regulator[2].The type-A response regulators are relatively small, containing a receiver domain along with short N- and C-terminal extensions.

The expression of a majority of OsRR genes was not significantly altered under stress, with the notable exception of OsRR6. The expression of OsRR6 gene was induced to significant levels by salt, dehydration and low temperature treatments (Fig. 1), and results were reproducible. This indicates that OsRR6 may play an important role in abiotic stress signaling in rice, besides acting as a component in cytokinin signaling[1].

[[File:Fig1.png|300px|thumb|left|Fig.1]]
The induction of OsRR6 by different abiotic stress stimuli provides a molecular link between stress and cytokinin signaling as well[1].

Overexpression of OsRR6 also affected the expression of CK-responsive genes[2].

OsRR6-ox plants displayed altered morphologies and changes in CK metabolism, probably due to changes in the gene regulatory network[2].

'''Fig.1''': Changes in transcript levels of the OsRR6 gene in response to different stress treatments. The transcript levels of OsRR6 gene in 6-day-old light-grown seedlings treated with ABA, NaCl, mannitol and cold for 6 h, were plotted as the relative expression (fold) of the seedlings mock-treated for the same duration.

Generated transgenic rice plants that overexpress OsRR6 (OsRR6-ox) by fusing its coding sequence to the rice actin1 (Act1) promoter, because this promoter generally produces much higher levels of constitutive expression in rice than the cauliflower mosaic virus(CaMV) 35S promoter. Callus transformed with Act1::OsRR6 showed severe retardation of shoot regeneration compared with callus transformed with a control vector (Fig. 2)[2].
[[File:Fig2.png|300px|thumb|left|Fig.2]]

'''Fig.2''': OsRR6 represses shoot regeneration in rice callus. Callus was transformed with Agrobacterium carrying a binary vector pActnos/Hmz (Vec.), Act1::OsRR6 (OsRR6) or Act1::OsRR6D103E (OsRR6D103E). Calli were selected with hygromycin B and grown on regeneration agar plates for 6 weeks.

Moreover, each of 20 OsRR6D103E-ox independent lines was indistinguishable from plants transformed with a control vector (control plants; Fig. 3A, B). These results support the hypothesis that growth defects associated with OsRR6 overexpression are due to a requirement for phosphorylation of OsRR6[2].
[[File:Fig3.png|300px|thumb|left|Fig.3]]

'''Fig.3''': Morphologies of transgenic plants overexpressing OsRR6. OsRR6-ox transgenic plants (T0 generation) were grown on MS-agar plates containing hygromycin B for 7 d, and then hydroponically grown for 75 d. Transgenic plants, transformed with vector pActnos/Hmz (Vec.) or Act1::OsRR6D103E (OsRR6D103E-ox), were also grown under the same conditions. The typical phenotype of each transgenic line and their panicles are shown in (A) and (B). Total RNA samples were prepared from the shoots of each transgenic plant. (C) Semiquantitative RT–PCR analysis of the OsRR6 gene in the transgenic lines. OsAct1 is an extraction and loading control.

Future analyses of knockout or RNA interference mutants of OsRR6 will enable us to define further its possible participation in stress responses.

===Expression===

OsRR6 is found as repeats on the top arm of chromosome 4. This area of chromosome 4 is included in a segmental duplication with a region on the upper arm of chromosome 2 (Fig. 4)[4].
[[File:Fig4.png|300px|thumb|right|Fig.4]]

'''Fig.4''':Locations and duplications of putative cytokinin two-component regulators in the rice chromosomes (cv. Nipponbare). Ovals on the chromosomes represent centromeres.

The OsRR genes express differentially in various organs examined, and also in response to light[1]. Most of the OsRR genes were expressed at relatively higher level in mature tissues (leaves and flowers).The majority of the type-A OsRR genes (OsRR2–9 and OsRR11) were expressed at various levels in roots, stems, leaves, and spikelets (Fig.5)([4]. OsRR6 was expressed mostly in roots and leaves.

The transcript levels of OsRR2, 3, 4, 6, 7,and 9 were significantly higher in etiolated seedlings as compared to green seedlings (Fig. 6)[4].
[[File:Fig5.png|300px|thumb|right|Fig.5]]

'''Fig.5''':The analysis of the response of the system genes family to cytokinin by RT-PCR. RNA was isolated from roots and leaves from Nipponbare rice growing in liquid nutrient medium either with 1 μM 6-benzylaminopurine (6-BA) for 4 h or with no 6-BA. OsACTIN primers were used as a template control.

[[File:Fig6.png|300px|thumb|right|Fig.6]]
'''Fig.6''':Real-time PCR analysis showing the organ-specific expression profiles of individual OsRR genes. The relative mRNA levels of individual OsRR genes normalized with respect to housekeeping gene, UBQ5, in different tissues (GS, green seedlings; ES, etiolated seedlings; S, green shoots

===Evolution===

The type-A RRs are mainly composed of a receiver domain with short N- and C-terminal extensions [2], essentially similar to the E. coli response regulator (RR) CheY involved in chemotaxis, and lack a typical output domain(3). All the OsRR proteins also contain the highly conserved Lys and two Asp residues (D-D-K) in the receiver domain (Fig. 7B, C).However, OsRR6 and OsRR7 have N-terminal extensions rich in gly and asp residues (Fig. 7C). These N- and C-terminal variable regions may play a role in their localization to different cellular compartments.No homolog of OsRR6 was found within the duplicated region, suggesting the involvement of gene loss or more localized duplications[4].

OsRR6 were found as repeats on the top arm of chromosome 4. This area of chromosome 4 is included in a segmental duplication with a region on the upper arm of chromosome 2 that contains the OsRR11 gene [4](Fig. 4).

You can also add sub-section(s) at will.

==Labs working on this gene==

1. Mukesh Jain, Akhilesh K Tyagi and Jitendra P Khurana

2. Liming Du, Fangchan Jiao, Jun Chu, Ming Chen, Ping Wu

3. X. Cheng, H. Jiang, J. Zhang, Y. Qian, S. Zhu and B. Cheng

==References==

1. Mukesh Jain, Akhilesh K Tyagi: Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa)BMC Plant Biology 2006, 6:1

2.Hirose N, Makita N, Kojima M, Kamada-Nobusada T, et al. Overexpression of a type-A response regulator alters rice morphology and cytokinin metabolism. Plant Cell Physiol. 2007,48: 523-539.

3.Imamura A, Hanaki N, Umeda H, Nakamura A, Suzuki T, Ueguchi C, Mizuno T: Response regulators implicated in His-to-Asp phosphotransfer signaling in Arabidopsis. Proc Natl Acad Sci USA 1998,95:2691-2696

4.Liming Du, Fangchan Jiao, Jun Chu:The two-component signal system in rice (Oryza sativa L.): A genome-wide study of cytokinin signal perception and transduction.Genomics 2007,89: 697–707

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 4]]
[[Category:Chromosome 4]]

Os01g0302500

2017-03-06T14:52:39Z

Xysj2019:

The rice '''''Os01g0302500''''' was reported as '''''OsH6''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os01g0302500''''' '''''<=>''''' '''''OsH6, HOS16'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Many homeobox genes encode transcription factors with regulatory roles in animal and plant development.
* Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants.
* The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

Os03g0727000

2017-03-06T14:52:05Z

Xysj2019: /* Annotated Information */

The rice '''''Os03g0727000''''' was reported as '''''OSH1''''' in 1996 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os03g0727000''''' '''''<=>''''' '''''OSKN1, Oskn1, OsKN1, OSH1/Oskn1, HB75'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.
* '''''OSH1''''' is not directly associated with organ differentiation, but may be related to a regulatory process before or independent of the organ determination.
* '''''OSH1''''' plays an important role in regionalization of cell identity during early embryogenesis.

===Expression===
* In situ hybridization analysis revealed that in the wild-type embryo, '''''OSH1''''' was first expressed at the globular stage, much earlier than organogenesis started, in a ventral region where shoot apical meristem and epiblast would later develop.
* This localized expression of '''''OSH1''''' indicates that the cellular differentiation has already occurred at this stage.
* At later stages after organogenesis had initiated, '''''OSH1''''' expression was observed in shoot apical meristem [except in the Li (tunica) layer], epiblast, radicle, and their intervening tissues in descending strength of expression level with embryonic maturation.

You can also add sub-section(s) at will.

==Labs working on this gene==
* Nagoya University, BioScience Center, Chikusa, Nagoya 464-01, Japan; the Faculty of Agriculture, University of Tokyo, Tokyo 113, Japan;
* Agrobiological Resources, Tsukuba, Ibaraki 305, Japan;
* Department of Biology, Aichi University of Education, Kariya 448, Japan

==References==
<references>
* <ref name="ref1">
Sato Y, Hong SK, Tagiri A, Kitano H, Yamamoto N, Nagato Y, Matsuoka M. A rice
homeobox gene, OSH1, is expressed before organ differentiation in a specific
region during early embryogenesis. Proc Natl Acad Sci U S A. 1996 Jul
23;93(15):8117-22. PubMed PMID: 8755613; PubMed Central PMCID: PMC38885.
</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]

Os03g0771500

2017-03-06T14:51:12Z

Xysj2019:

The rice '''''Os03g0771500''''' was reported as '''''OsH43''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os03g0771500''''' '''''<=>''''' '''''OsH43''''','''''H43'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Many homeobox genes encode transcription factors with regulatory roles in animal and plant development.
* Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants.
* The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]

Os05g0129700

2017-03-06T14:51:06Z

Xysj2019:

The rice '''''Os05g0129700''''' was reported as '''''OSH71''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os05g0129700''''' '''''<=>''''' '''''OsKn2, OsH71, HOS9, OSH71, OSH71/Oskn2'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Many homeobox genes encode transcription factors with regulatory roles in animal and plant development.
* Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants.
* The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]

Os01g0302500

2017-03-06T14:50:18Z

Xysj2019:

The rice '''''Os01g0302500''''' was reported as '''''OsH6''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os07g0129700''''' '''''<=>''''' '''''OsH6, HOS16'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Many homeobox genes encode transcription factors with regulatory roles in animal and plant development.
* Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants.
* The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

Test

2017-03-06T14:48:43Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|629
|''QHB''
|[[Os01g0854500]]
|10.1046/j.1365-313X.2003.01816.x
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|632
|''OsSBP''
|[[Os01g0916400]]
|10.1271/bbb.68.873
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|640
|''LRK1''
|[[Os02g0154200]]
|10.1111/j.1467-7652.2009.00428.x
|
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|643
|''CYP734A2''
|[[Os02g0204700]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|644
|''OsHPL2''
|[[Os02g0218700]]
|10.1111/j.1365-313X.2009.04031.x
|
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|660
|''OsDof12''
|[[Os03g0169600]]
|10.1007/s00425-009-0893-7
|
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|664
|''OsAOS2''
|[[Os03g0225900]]
|10.1094/MPMI-19-1127
|
|-
|665
|''RPN10''
|[[Os03g0243300]]
|10.5511/plantbiotechnology.21.233
|
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|670
|''OsEIL1''
|[[Os03g0324300]]
|10.1007/s11103-005-6184-1
|
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|673
|''OsIRO3''
|[[Os03g0379300]]
|10.1186/1471-2229-10-166
|
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|Annotated
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}

Os03g0771500

2017-03-06T14:47:52Z

Xysj2019:

The rice '''''Os03g0771500''''' was reported as '''''OsH43''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os07g0129700''''' '''''<=>''''' '''''OsH43''''','''''H43'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Many homeobox genes encode transcription factors with regulatory roles in animal and plant development.
* Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants.
* The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>
</references>

==Structured Information==
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]

Os07g0129700

2017-03-06T14:46:24Z

Xysj2019: /* References */

The rice '''''Os07g0129700''''' was reported as '''''OSH15''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os07g0129700''''' '''''<=>''''' '''''OSH15''''','''''H15'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Many homeobox genes encode transcription factors with regulatory roles in animal and plant development.
* Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants.
* The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog. <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref2"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 7]]
[[Category:Chromosome 7]]

Os07g0129700

2017-03-06T14:46:10Z

Xysj2019:

Os07g0129700

2017-03-06T14:45:31Z

Xysj2019: /* References */

The rice '''''Os07g0129700''''' was reported as '''''OSH15''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os07g0129700''''' '''''<=>''''' '''''OSH15''''','''''H15'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Plant homeobox genes can be classified into 14 evolutionary classes, each characterised by fusion of the homeodomain with class‐specific codomains.
* Among these classes only BEL and KNOX are found in red algae, whereas unicellular green algae also include members of the classes WOX, DDT and PINTOX.
* All 14 classes are found only in land plants, including moss and vascular plants, suggesting that homeobox genes have proliferated within each class particularly in flowering plants, indicating that all classes had already differentiated in the common ancestor of moss and vascular plants <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
* <ref name="ref1"> Holland PW. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol. 2013
Jan-Feb;2(1):31-45. doi: 10.1002/wdev.78. Review. PubMed PMID: 23799629.</ref>

</references>

Many homeobox genes encode transcription factors with regulatory roles in animal and plant development. Homeobox genes are found in almost all eukaryotes, and have diversified into 11 gene classes and over 100 gene families in animal evolution, and 10 to 14 gene classes in plants. The largest group in animals is the ANTP class which includes the well-known Hox genes, plus other genes implicated in development including ParaHox (Cdx, Xlox, Gsx), Evx, Dlx, En, NK4, NK3, Msx, and Nanog.

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 7]]
[[Category:Chromosome 7]]

Os07g0129700

2017-03-06T14:42:27Z

Xysj2019: /* Phenotypic analysis */

The rice '''''Os07g0129700''''' was reported as '''''OSH15''''' in 2000 <ref name="ref1" /> by researchers from Japan.

==Annotated Information==
===Gene Symbol===
*'''''Os07g0129700''''' '''''<=>''''' '''''OSH15''''','''''H15'''''

===Function===
* Homeobox genes encode a large family of homeodomain proteins that play a key role in the pattern formation of animal embryos.
* By analogy, homeobox genes in plants are thought to mediate important processes in their embryogenesis.

===Phenotypic analysis===
* Over-expression of '''''OSH15''''' and '''''OSH71''''' Induces Ectopic Meristems on Leaf Sheaths.
* Over-expression of '''''OSH6 ''''' and '''''OSH43''''' Induces Ligule Displacement in Transgenic Plants.

==Knowledge Extension==
* Plant homeobox genes can be classified into 14 evolutionary classes, each characterised by fusion of the homeodomain with class‐specific codomains.
* Among these classes only BEL and KNOX are found in red algae, whereas unicellular green algae also include members of the classes WOX, DDT and PINTOX.
* All 14 classes are found only in land plants, including moss and vascular plants, suggesting that homeobox genes have proliferated within each class particularly in flowering plants, indicating that all classes had already differentiated in the common ancestor of moss and vascular plants <ref name="ref2" />.

==Labs working on this gene==
* BioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan

==References==
<references>
* <ref name="ref1"> Sentoku N, Sato Y, Matsuoka M. Overexpression of rice OSH genes induces
ectopic shoots on leaf sheaths of transgenic rice plants. Dev Biol. 2000 Apr
15;220(2):358-64. PubMed PMID: 10753522.</ref>
</references>

==Structured Information==

[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 7]]
[[Category:Chromosome 7]]

Os07g0129700

2017-03-06T14:37:29Z

Xysj2019:

Test

2017-03-06T13:58:04Z

Xysj2019:

{|class="wikitable" \style="width:90%;text-align:center
|-
!Number
!Gene name
!RAP ID
!DOI
!Reference TitleLDMAR
!Keywords
|-
|1
|''GA2ox3''
|[[Os01g0757200]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|2
|''GA2ox9''
|[[Os02g0630300]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|3
|''GA2ox6''
|[[Os04g0522500]]
|10.1105/tpc.108.060913
|
*A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice W
|-
|4
|''SG1''
|[[Os09g0459200]]
|10.1104/pp.111.187567
|
*Annotated
|-
|5
|''ALS''
|[[Os02g0510200]]
|10.1007/s00299-010-0915-8
|
*Selecting genetic transformants of indica and indica-derived rice cultivars using bispyribac sodium and a mutated ALS gene
|-
|6
|''EL5''
|[[Os02g0559800]]
|10.1111/j.1365-313X.2007.03120.x
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice1[W][OA]
|-
|7
|''OASA2''
|[[Os03g0264400]]
|10.1104/pp.111.175778
|
*Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice1[W][OA]
|-
|8
|''OsGAD2''
|[[Os04g0447800]]
|10.1093/jxb/erm120
|
*C-terminal extension of rice glutamate decarboxylase(OsGAD2) functions as an autoinhibitory domain and overexpression of a truncated mutant results in the accumulation of extremely high levels of GABA in plant cells
|-
|9
|''OsIAA3''
|[[Os12g0601400]]
|10.1111/j.1365-313X.2006.02693.x
|
*Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein
|-
|10
|''IDEF1''
|[[Os08g0101000]]
|10.1111/j.1365-313X.2011.04772.x
|
*Annotated
|-
|11
|''OsPLDα1''
|[[Os01g0172400]]
|10.1111/j.1744-7909.2010.01021.x
|
*Annotated
|-
|12
|''AFT''
|[[Os01g0185300]]
|10.1007/s00425-009-1077-1
|
*Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
|-
|13
|''OsGAE1''
|[[Os01g0201600]]
|10.1007/s11103-006-9030-1
|
*The rice OsGAE1 is a novel gibberellin-regulated gene and involved in rice growth
|-
|14
|''OsMADS3''
|[[Os01g0201700]]
|10.1023/A:1006051911291
|
*Annotated
|-
|15
|''OsSAMS3''
|[[Os01g0293000]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|16
|''OsSAMS2''
|[[Os01g0323600]]
|10.1016/j.jplph.2011.05.020
|
*Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice
|-
|17
|''OsACO7''
|[[Os01g0580500]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|18
|''OsrbohA''
|[[Os01g0734466]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|19
|''Orysa;CycB1;1''
|[[Os01g0805600]]
|10.1007/s00425-009-1051-y
|
*Annotated
|-
|20
|''OsNAC4''
|[[Os01g0816100]]
|10.1038/emboj.2009.39
|
*The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
|-
|21
|''OsHAP3A''
|[[Os01g0834400]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|22
|''HDT702''
|[[Os01g0909100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|23
|''OsDCL1''
|[[Os01g0909200]]
|10.1104/pp.105.063420
|
*Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice
|-
|24
|''SDG714''
|[[Os01g0927000]]
|10.1105/tpc.106.048124
|
*SDG714, a Histone H3K9 Methyltransferase, Is Involved in Tos17 DNA Methylation and Transposition in Rice
|-
|25
|''rtS''
|[[Os01g0929600]]
|10.1007/s11103-006-9031-0
|
*Annotated
|-
|26
|''Osg1''
|[[Os01g0947700]]
|10.1007/s00425-010-1301-z
|
*A rice �-1,3-glucanase gene Osg1 is required for callose degradation in pollen development
|-
|27
|''NOA1''
|[[Os02g0104700]]
|10.1371/journal.pone.0020015
|
*Annotated
|-
|28
|''OsNOA1?RIF1''
|[[Os02g0104700]]
|10.1111/j.1469-8137.2010.03264.x
|
*Annotated
|-
|29
|''Os4CL3''
|[[Os02g0177600]]
|10.1104/pp.111.178301
|
*Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
|-
|30
|''HDA703''
|[[Os02g0214900]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|31
|''HDA710''
|[[Os02g0215200]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|32
|''RPBF''
|[[Os02g0252400]]
|10.1111/j.1365-313X.2009.03925.x
|
*Compensation and interaction between RISBZ1 and RPBF during grain filling in rice
|-
|33
|''DCW11''
|[[Os02g0255100]]
|10.1093/pcp/pcn036
|
*DCW11, Down-Regulated Gene 11 in CW-Type Cytoplasmic Male Sterile Rice,Encoding Mitochondrial Protein Phosphatase 2C is Related to Cytoplasmic Male Sterility
|-
|34
|''OsHARP''
|[[Os02g0256200]]
|10.1007/s00726-008-0043-8
|
*Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice
|-
|35
|''OsGMST1''
|[[Os02g0274900]]
|10.1093/jxb/err178
|
*Annotated
|-
|36
|''OsTudor-SN''
|[[Os02g0523500]]
|10.1111/j.1365-313X.2008.03516.x
|
*The cytoplasmic-localized, cytoskeletal-associated RNA binding protein OsTudor-SN: evidence for an essential role in storage protein RNA transport and localization
|-
|37
|''RAR1''
|[[Os02g0535400]]
|10.1105/tpc.107.055517
|
*Annotated
|-
|38
|''GF14e''
|[[Os02g0580300]]
|10.1111/j.1365-313X.2011.04728.x
|
*Annotated
|-
|39
|''OsNAR2.1''
|[[Os02g0595900]]
|10.1111/j.1365-3040.2011.02335.x
|
*Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges
|-
|40
|''OsCKI1''
|[[Os02g0622100]]
|10.1046/j.1365-313X.2003.01866.x
|
*Annotated
|-
|41
|''Oscry2''
|[[Os02g0625000]]
|10.1093/pcp/pcj064
|
*Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering
|-
|42
|''OsYSL15''
|[[Os02g0650300]]
|10.1074/jbc.M806042200
|
*Annotated
|-
|43
|''SGL1''
|[[Os02g0762600]]
|10.1104/pp.111.187567
|
*SHORT GRAIN1 Decreases Organ Elongation and Brassinosteroid Response in Rice
|-
|44
|''CEBiP''
|[[Os03g0133400]]
|10.1111/j.1365-313X.2010.04328.x
|
*Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice
|-
|45
|''OsPAO''
|[[Os03g0146400]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|46
|''OsPT2''
|[[Os03g0150800]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|47
|''OsSUT1''
|[[Os03g0170900]]
|10.1093/pcp/pce148
|
*Annotated
|-
|48
|''OsBP-73''
|[[Os03g0183100]]
|10.1023/A:1024854101965
|
*OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like domain and its genetic interference by double-stranded RNA inhibits rice growth
|-
|49
|''OsMDP1''
|[[Os03g0186600]]
|10.1111/j.1365-313X.2006.02804.x
|
*A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling
|-
|50
|''RINO1''
|[[Os03g0192700]]
|10.1093/pcp/pcp071
|
*Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles
|-
|51
|''OsMADS1''
|[[Os03g0215400]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|53
|''OsApx1''
|[[Os03g0285700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|54
|''APx1''
|[[Os03g0285700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|55
|''OsFAD7''
|[[Os03g0290300]]
|10.1093/pcp/pcm107
|
*Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
|-
|57
|''RGB1''
|[[Os03g0669100]]
|10.1111/j.1365-313X.2011.04643.x
|
*Suppression of the rice heterotrimeric G protein b-subunit gene, RGB1, causes dwarfism and browning of internodes and lamina joint regions
|-
|58
|''OsPIPK1''
|[[Os03g0701800]]
|10.1023/B:PLAN.0000028796.14336.24
|
*OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes
|-
|59
|''ero1''
|[[Os03g0733800]]
|10.1073/pnas.0904429106
|
*ER membrane-localized oxidoreductase Ero1 is required for disulfide bond formation in the rice endosperm
|-
|60
|''OsSPO11-1''
|[[Os03g0752200]]
|10.1007/s00412-010-0284-7
|
*OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice
|-
|61
|''CysR10''
|[[Os03g0766000]]
|10.1093/pcp/pcr053
|
*A Role for the Cysteine-Rich 10 kDa Prolamin in Protein Body I Formation in Rice
|-
|62
|''OsGLO1''
|[[Os03g0786100]]
|10.1093/jxb/erp056
|
*Inducible antisense suppression of glycolate oxidase reveals its strong regulation over photosynthesis in rice
|-
|63
|''OsMet1''
|[[Os03g0798300]]
|10.1111/j.1365-313X.2008.03624.x
|
*Annotation
|-
|64
|''CYP99A3''
|[[Os04g0178400]]
|10.1111/j.1365-313X.2010.04408.x
|
*Annotation
|-
|65
|''CYP99A2''
|[[Os04g0180400]]
|10.1111/j.1365-313X.2010.04408.x
|
*CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
|-
|66
|''Ostil1''
|[[Os04g0460600]]
|10.1111/j.1469-8137.2007.02177.x
|
*Overexpression of a NAC-domain protein promotes shoot Blackwell Publishing Ltd branching in rice
|-
|67
|''OsPBP1''
|[[Os04g0531100]]
|10.1093/mp/ssn035
|
*A Novel C2-Domain Phospholipid-Binding Protein, OsPBP1, Is Required for Pollen Fertility in Rice
|-
|68
|''YAB3''
|[[Os04g0536300]]
|10.1104/pp.107.095737
|
*Annotation
|-
|69
|''OsACS2''
|[[Os04g0578000]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|70
|''rca''
|[[Os04g0658300]]
|10.1093/aob/mcl025
|
*Annotation
|-
|71
|''OsRMC''
|[[Os04g0659300]]
|10.1111/j.1365-3040.2007.01663.x
|
*Annotation
|-
|72
|''OsMT2b''
|[[Os05g0111300]]
|10.1104/pp.107.110304
|
*Annotation
|-
|73
|''XB3''
|[[Os05g0112000]]
|10.1105/tpc.106.046730
|
*Annotation
|-
|74
|''STAR2''
|[[Os05g0119000]]
|10.1105/tpc.108.064543
|
*Annotation
|-
|75
|''OsSAMS1''
|[[Os05g0135700]]
|10.1016/j.jplph.2011.05.020
|
*Annotation
|-
|76
|''OsACO5''
|[[Os05g0149400]]
|10.1104/pp.110.162412
|
*Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
|-
|77
|''OsBLE3''
|[[Os05g0245300]]
|10.1016/j.phytochem.2006.05.026
|
*OsBLE3, a brassinolide-enhanced gene, is involved in the growth of rice
|-
|78
|''OsMADS4''
|[[Os05g0423400]]
|10.1023/A:1006051911291
|
*Identification of class B and class C floral organ identity genes from rice plants
|-
|79
|''IDEF2''
|[[Os05g0426200]]
|10.1074/jbc.M708732200
|
*A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants
|-
|81
|''OsHAP3C''
|[[Os05g0573500]]
|10.1046/j.1365-313X.2003.01897.x
|
*Annotated
|-
|82
|''OsRAD21-4''
|[[Os05g0580500]]
|10.1007/s11103-005-4922-z
|
*Annotated
|-
|83
|''OsMAPK6''
|[[Os06g0154500]]
|10.1104/pp.104.057414
|
*A Sphingolipid Elicitor-Inducible Mitogen-Activated Protein Kinase Is Regulated by the Small GTPase OsRac1 and Heterotrimeric G-Protein in Rice
|-
|84
|''RFT1''
|[[Os06g0157500]]
|10.1242/dev.040170
|
*Annotated
|-
|85
|''OsMADS5''
|[[Os06g0162800]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|86
|''SSIIa''
|[[Os06g0229800]]
|10.1139/g11-010
|
*Annotated
|-
|87
|''OsGSR1''
|[[Os06g0266800]]
|10.1111/j.1365-313X.2008.03707.x
|
*OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice
|-
|89
|''HDA702''
|[[Os06g0583400]]
|10.1016/j.bbrc.2009.07.162
|
*Annotation
|-
|90
|''OsPNH1''
|[[Os06g0597400]]
|10.1046/j.1365-313X.2002.01279.x
|
*OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice
|-
|91
|''OsPLDα4''
|[[Os06g0604200]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|92
|''OsPLDα5''
|[[Os06g0604300]]
|10.1104/pp.111.183749
|
*The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice
|-
|93
|''OsLIC''
|[[Os06g0704300]]
|10.1371/journal.pone.0003521
|
*OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling
|-
|94
|''OsEIN2''
|[[Os07g0155600]]
|10.1104/pp.109.152702
|
*Annotated
|-
|95
|''HDA704''
|[[Os07g0164100]]
|10.1016/j.bbrc.2009.07.162
|
*Rice histone deacetylase genes display specific expression patterns and developmental functions
|-
|96
|''RISBZ1''
|[[Os07g0182000]]
|10.1111/j.1365-313X.2009.03925.x
|
*Annotated
|-
|97
|''NDP kinase''
|[[Os07g0492000]]
|10.1104/pp.122.2.447
|
*Annotated
|-
|98
|''OsDR8''
|[[Os07g0529600]]
|10.1007/s11103-005-4770-x
|
*Annotated
|-
|99
|''OsFOR1''
|[[Os07g0568700]]
|10.1023/B:PLAN.0000006940.89955.f1
|
*Annotated
|-
|100
|''OsBZR1''
|[[Os07g0580500]]
|10.1073/pnas.0706386104
|
*Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice
|-
|101
|''Osppc4''
|[[Os01g0208700]]
|10.1073/pnas.0913127107
|
*Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation
|-
|102
|''OsPDK1''
|[[Os07g0637300]]
|10.1093/pcp/pci241
|
*Gibberellin Regulates Mitochondrial Pyruvate Dehydrogenase Activity in Rice
|-
|103
|''OsBLE2''
|[[Os07g0650600]]
|10.1023/A:1025001304994
|
*A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice
|-
|104
|''aldolase''
|[[Os07g0650600]]
|10.1007/s11103-004-5920-2
|
*Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling
|-
|105
|''rtGA2.1''
|[[Os07g0687700]]
|10.1111/j.1365-313X.2005.02457.x
|
*Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae
|-
|106
|''OsFAD8''
|[[Os07g0693800]]
|10.1093/pcp/pcm107
|
*Annotated
|-
|107
|''OsApx2''
|[[Os07g0694700]]
|10.1016/j.phytochem.2010.01.003
|
*Annotated
|-
|108
|''APx2''
|[[Os07g0694700]]
|10.1111/j.1365-3040.2011.02366.x
|
*Annotated
|-
|109
|''OsDEG10''
|[[Os08g0139000]]
|10.1016/j.bbrc.2009.01.131
|
*Annotated
|-
|110
|''OsDR10''
|[[Os08g0155900]]
|10.1371/journal.pone.0004603
|
*A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response
|-
|111
|''OsBAK1''
|[[Os08g0174700]]
|10.1111/j.1467-7652.2009.00444.x
|
*Annotated
|-
|112
|''OsGLP8''
|[[Os08g0189200]]
|10.1104/pp.108.128348
|
*A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice
|-
|113
|''SSIIIa''
|[[Os08g0191433]]
|10.1139/g11-010
|
*Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch
|-
|114
|''OsRAD21-3''
|[[Os08g0266700]]
|10.1111/j.1365-313X.2007.03190.x
|
*OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa
|-
|115
|''OsCCC1''
|[[Os08g0323700]]
|10.1007/s11103-011-9744-6
|
*Annotated
|-
|116
|''OsrbohE''
|[[Os08g0453733]]
|10.5511/plantbiotechnology.22.127
|
*Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
|-
|117
|''OsHI-LOX''
|[[Os08g0508800]]
|10.1111/j.1365-313X.2009.03988.x
|
*Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder
|-
|118
|''OsAPx-R''
|[[Os08g0522400]]
|10.1111/j.1469-8137.2011.03659.x
|
*Ascorbate peroxidase-related (APx-R) is a new hemecontaining protein functionally associated with ascorbate peroxidase but evolutionarily divergent
|-
|119
|''OsMADS7''
|[[Os08g0531700]]
|10.1111/j.1365-313X.2009.04101.x
|
*Annotated
|-
|120
|''Os8N3''
|[[Os08g0535200]]
|10.1073/pnas.0604088103
|
*Annotated
|-
|121
|''OsCERK1''
|[[Os08g0538300]]
|10.1111/j.1365-313X.2010.04324.x
|
*Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice
|-
|122
|''OsSPY''
|[[Os08g0559300]]
|10.1111/j.1365-313X.2006.02875.x
|
*Annotated
|-
|123
|''OsPT6''
|[[Os08g0564000]]
|10.1111/j.1365-313X.2008.03726.x
|
*Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
|-
|124
|''OsMADS8''
|[[Os09g0507200]]
|10.1111/j.1365-313X.2009.04101.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|125
|''OsSGT1''
|[[Os09g0518200]]
|10.1111/j.1365-313X.2008.03697.x
|
*Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa)
|-
|126
|''OsGEN-L''
|[[Os09g0521900]]
|10.1093/pcp/pci090
|
*RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice
|-
|128
|''Ugp1''
|[[Os09g0553200]]
|10.1105/tpc.106.044123
|
*Rice UDP-Glucose Pyrophosphorylase1 Is Essential for Pollen Callose Deposition and Its Cosuppression Results in a New Type of Thermosensitive Genic Male Sterility
|-
|129
|''OsRCCR1''
|[[Os10g0389200]]
|10.1016/j.jplph.2011.05.026
|
*Knockdown of OsPAO and OsRCCR1 cause different plant death phenotypes in rice
|-
|130
|''EBL1''
|[[Os10g0390800]]
|10.1007/s10529-010-0405-7
|
*Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice
|-
|131
|''OsDCL3b''
|[[Os10g0485600]]
|10.1111/j.1365-313X.2011.04805.x
|
*Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
|-
|132
|''OsPLDbeta1''
|[[Os10g0524400]]
|10.1104/pp.108.131979
|
*Suppression of a Phospholipase D Gene, OsPLDb1,Activates Defense Responses and Increases Disease Resistance in Rice
|-
|134
|''SPK''
|[[Os10g0539600]]
|10.1093/pcp/pch122
|
*A Rice Antisense SPK Transformant that Lacks the Accumulation of Seed Storage Substances Shows no Correlation Between Sucrose Concentration in Phloem Sap and Demand for Carbon Sources in the Sink Organs
|-
|135
|''OsMPK5''
|[[Os11g0684000]]
|10.1104/pp.109.152702
|
*Abscisic Acid-Induced Resistance against the Brown Spot Pathogen Cochliobolus miyabeanus in Rice Involves MAP Kinase-Mediated Repression of Ethylene Signaling
|-
|136
|''OsDMC1''
|[[Os12g0143800]]
|10.1007/s11103-007-9195-2
|
*OsDMC1 is required for homologous pairing in Oryza sativa
|-
|137
|''Ostrxm''
|[[Os12g0188700]]
|10.1104/pp.108.123547
|
*Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants
|-
|139
|''OsRBCS2''
|[[Os12g0274700]]
|10.1111/j.1365-3040.2011.02434.x
|
*Effect of individual suppression of RBCS multigene family on Rubisco contents in rice leavespce_2434 546..553
|-
|143
|''OsTDL1A''
|[[Os12g0472500]]
|10.1111/j.1365-313X.2008.03426.x
|
*Annotated
|-
|144
|''OsSpo11-4''
|[[Os12g0622500]]
|10.1371/journal.pone.0020327
|
*Annotated
|-
|145
|''OsDOS''
|[[Os01g0192000]]
|10.1104/pp.106.082941
|
*Annotated
|-
|146
|''OsNPR1''
|[[Os01g0194300]]
|10.1007/s11103-010-9695-3
|
*Annotated
|-
|147
|''OsRac1''
|[[Os01g0229400]]
|10.1073/pnas.98.2.759
|
*Essential role of the small GTPase Rac in disease resistance of rice
|-
|148
|''Rdd1''
|[[Os01g0264000]]
|10.1111/j.1365-3040.2009.01954.x
|
*Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice
|-
|149
|''OsLOL2''
|[[Os01g0612700]]
|10.1007/s00438-007-0232-2
|
*The rice OsLOL2 gene encodes a zinc Wnger protein involved in rice growth and disease resistance
|-
|150
|''OsYUCCA1''
|[[Os01g0645400]]
|10.1104/pp.106.091561
|
*Auxin Biosynthesis by the YUCCA Genes in Rice
|-
|151
|''PME1''
|[[Os01g0788400]]
|10.1111/j.1365-313X.2011.04486.x
|
*Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves
|-
|152
|''OsABI5''
|[[Os01g0859300]]
|10.1007/s11103-008-9298-4
|
*Annotated
|-
|153
|''OsNAC6''
|[[Os01g0884300]]
|10.1111/j.1365-313X.2009.03908.x
|
*Annotated
|-
|154
|''OsIRO2''
|[[Os01g0952800]]
|10.1111/j.1365-313X.2007.03149.x
|
*Annotated
|-
|155
|''BiP1''
|[[Os02g0115900]]
|10.1111/j.1365-313X.2010.04453.x
|
*Annotated
|-
|156
|''OsYSL2''
|[[Os02g0649900]]
|10.1111/j.1365-313X.2010.04158.x
|
*Annotated
|-
|157
|''ARAG1''
|[[Os02g0657000]]
|10.1093/aob/mcp303
|
*Annotated
|-
|158
|''OsPIP1;1''
|[[Os02g0666200]]
|10.1038/cr.2007.34
|
*Annotated
|-
|159
|''OsDHODH1''
|[[Os02g0736400]]
|10.1111/j.1744-7909.2009.00853.x
|
*Annotated
|-
|160
|''OsPIN1''
|[[Os02g0743400]]
|10.1093/pcp/pci183
|
*Annotated
|-
|161
|''OsMADS22''
|[[Os02g0761000]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|162
|''AmyI-1''
|[[Os02g0765600]]
|10.1093/pcp/pci091
|
*Annotated
|-
|163
|''OsPIP1;3''
|[[Os02g0823100]]
|10.1038/cr.2007.34
|
*Annotated
|-
|164
|''OsACDR1''
|[[Os03g0160100]]
|10.1007/s10059-009-0161-5
|
*Annotated
|-
|165
|''OsBRR1''
|[[Os03g0228800]]
|10.1007/s00425-009-0951-1
|
*A putative leucine-rich repeat receptor kinase, OsBRR1, is involved in rice blast resistance
|-
|166
|''OsMAPK5''
|[[Os03g0285800]]
|10.1105/tpc.008714
|
*Annotation
|-
|167
|''OsWRKY31''
|[[Os03g0321700]]
|10.1038/cr.2007.104
|
*Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants
|-
|168
|''OsDIS1''
|[[Os03g0356414]]
|10.1104/pp.111.180893
|
*The SINA E3 Ligase OsDIS1 Negatively Regulates Drought Response in Rice
|-
|169
|''OsLOX1''
|[[Os03g0700700]]
|10.1007/s11103-007-9278-0
|
*A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack
|-
|170
|''OsSrt1''
|[[Os04g0271000]]
|10.1104/pp.107.099473
|
*Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
|-
|171
|''RERJ1''
|[[Os04g0301500]]
|10.1016/j.bbrc.2004.10.126
|
*Annotated
|-
|172
|''OsGA2ox6''
|[[Os04g0522500]]
|10.1016/S1673-8527(09)60022-9
|
*Annotated
|-
|173
|''RFL''
|[[Os04g0598300]]
|10.1073/pnas.0709059105
|
*Annotated
|-
|174
|''OsrcaA2''
|[[Os04g0658300]]
|10.1006/bbrc.2001.6269
|
*Annotated
|-
|175
|''OsMTP1''
|[[Os05g0128400]]
|10.1007/s00299-011-1140-9
|
*Annotated
|-
|176
|''OsWRKY45''
|[[Os05g0322900]]
|10.1093/jxb/err144
|
*Annotated
|-
|177
|''OsEXP4''
|[[Os05g0477600]]
|10.1105/tpc.011965
|
*Regulation of Expansin Gene Expression Affects Growth and Development in Transgenic Rice Plants
|-
|178
|''SDG728''
|[[Os05g0490700]]
|10.1093/mp/ssq030
|
*Rice SUVH Histone Methyltransferase Genes Display Specific Functions in Chromatin Modification and Retrotransposon Repression
|-
|179
|''OsRan2''
|[[Os05g0574500]]
|10.1093/jxb/erp341
|
*Annotation
|-
|180
|''OsMADS55''
|[[Os06g0217300]]
|10.1111/j.1365-313X.2008.03406.x
|
*Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses
|-
|181
|''OsCIPK23''
|[[Os07g0150700]]
|10.1016/S1673-8527(08)60073-9
|
*Annotated
|-
|182
|''OsTRXh1''
|[[Os07g0186000]]
|10.1104/pp.111.182808
|
*Annotated
|-
|183
|''TDC''
|[[Os08g0140300]]
|10.1104/pp.109.138552
|
*Annotated
|-
|184
|''OsLSD1''
|[[Os08g0159500]]
|10.1094/MPMI-18-0375
|
*Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
|-
|185
|''OsDERF1''
|[[Os08g0454000]]
|10.1371/journal.pone.0025216
|
*Annotated
|-
|186
|''OsGLP1''
|[[Os08g0460000]]
|10.1016/j.bbrc.2010.02.142
|
*Functional role of rice germin-like protein1 in regulation of plant height and disease resistance
|-
|187
|''OsPRP3''
|[[Os10g0148100]]
|10.1007/s11103-009-9557-z
|
*OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance
|-
|188
|''OsPT8''
|[[Os10g0444700]]
|10.1104/pp.111.175240
|
*The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice
|-
|189
|''OsWRKY89''
|[[Os11g0117400]]
|10.1007/s11103-007-9244-x
|
*Annotated
|-
|190
|''OsNAC5''
|[[Os11g0184900]]
|10.1007/s00425-011-1403-2
|
*Annotated
|-
|191
|''OsPCBP''
|[[Os11g0689300]]
|10.1007/s12374-011-9184-5
|
*A Calmodulin-Binding Protein from Rice is Essential to Pollen Development
|-
|192
|''OsrcaA1''
|[[Os11g0707000]]
|10.1006/bbrc.2001.6269
|
*Involvement of a Ca21-Dependent Protein Kinase Component Downstream to the Gibberellin-Binding Phosphoprotein, RuBisCO Activase, in Rice
|-
|193
|''sui1''
|[[Os01g0118300]]
|10.1007/s11103-011-9825-6
|
*Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice
|-
|194
|''Osjag''
|[[Os01g0129200]]
|10.1007/s11103-010-9703-7
|
*Molecular cloning and functional characterization of OsJAG gene based on a complete-deletion mutant in rice (Oryza sativa L.)
|-
|195
|''sl1''
|[[Os01g0129200]]
|10.1111/j.1365-313X.2009.03913.x
|
*STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
|-
|197
|''OsABCG31''
|[[Os01g0177900]]
|10.1073/pnas.1108444108
|
*Annotated
|-
|198
|''OsGI''
|[[Os01g0182600]]
|10.1105/tpc.111.083238
|
*Annotated
|-
|199
|''d2''
|[[Os01g0197100]]
|10.1105/tpc.014712
|
*Annotated
|-
|200
|''mads3''
|[[Os01g0201700]]
|10.1105/tpc.110.074369
|
*Annotated
|-
|201
|''OsGSK1''
|[[Os01g0205700]]
|10.1007/s11103-007-9213-4
|
*Annotated
|-
|202
|''nyc1''
|[[Os01g0227100]]
|10.1105/tpc.106.042911
|
*Annotated
|-
|203
|''OSH6''
|[[Os01g0302500]]
|10.1007/s00425-007-0576-1
|
*A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts,in rice
|-
|204
|''phd1''
|[[Os01g0367100]]
|10.1371/journal.pgen.1002196
|
*Annotated
|-
|205
|''dbs1''
|[[Os01g0513900]]
|10.1093/pcp/pci206
|
*The Rice Mutant dwarf bamboo shoot 1: A Leaky Mutant of the NACK-type Kinesin-like Gene Can Initiate Organ Primordia but not Organ Development
|-
|206
|''shl2''
|[[Os01g0527600]]
|10.1073/pnas.0704339104
|
|Finishend
*Annotated
|-
|207
|''osubp6''
|[[Os01g0550100]]
|10.1007/s10059-009-0138-4
|
*Structure and Expression of OsUBP6, an Ubiquitin-Specific Protease 6 Homolog in Rice (Oryza sativa L.)
|-
|208
|''log''
|[[Os01g0588900]]
|10.1038/nature05504
|
*Direct control of shoot meristem activity by a cytokinin-activating enzyme
|-
|209
|''osagpl2''
|[[Os01g0633100]]
|10.1007/s11103-007-9153-z
|
*Annotated
|-
|210
|''snl6''
|[[Os01g0639200]]
|10.1371/journal.pgen.1001123
|
*Annotated
|-
|211
|''Ostpc1''
|[[Os01g0678500]]
|10.1093/pcp/pch082
|
*Annotated
|-
|212
|''nadh-gogat1''
|[[Os01g0682001]]
|10.1007/s00726-010-0531-5
|
*Reverse genetics approach to characterize a function of NADH-glutamate synthase1 in rice plants
|-
|213
|''dgl1''
|[[Os01g0683100]]
|10.1104/pp.105.062968
|
*Analysis of the Rice Mutant dwarf and gladius leaf 1. Aberrant Katanin-Mediated Microtubule Organization Causes Up-Regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
|-
|214
|''spl28*''
|[[Os01g0703600]]
|10.1111/j.1469-8137.2009.03047.x
|
*Annotated
|-
|215
|''OsLFL''
|[[Os01g0713600]]
|10.1016/j.jplph.2007.07.010
|
*Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
|-
|216
|''d61''
|[[Os01g0718300]]
|10.1105/tpc.12.9.1591
|
*Annotated
|-
|217
|''d10''
|[[Os01g0746400]]
|10.1111/j.1365-313X.2007.03210.x
|
*Annotated
|-
|218
|''Bc7(t)''
|[[Os01g0750300]]
|10.1016/S1673-8527(07)60115-5
|
*Biochemical and molecular characterization of a rice glutelin allele for the GluA-1 gene
|-
|221
|''gamyb''
|[[Os01g0812000]]
|10.1105/tpc.017327
|
*Annotated
|-
|222
|''lax''
|[[Os01g0831000]]
|10.1073/pnas.1932414100
|
*Annotated
|-
|223
|''oscfbp1''
|[[Os01g0866400]]
|10.1111/j.1365-3040.2008.01890.x
|
*Annotated
|-
|224
|''Osabf1''
|[[Os01g0867300]]
|10.1007/s11103-009-9592-9
|
*Annotated
|-
|225
|''Os-pollux''
|[[Os01g0870100]]
|10.1104/pp.108.131540
|
*Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|226
|''OsPdk1''
|[[Os01g0872800]]
|10.1093/pcp/pcq167
|
*Pdk1 Kinase Regulates Basal Disease Resistance Through the OsOxi1–OsPti1a Phosphorylation Cascade in Rice
|-
|227
|''Osspr1''
|[[Os01g0898300]]
|10.1111/j.1469-8137.2010.03513.x
|
*Annotated
|-
|228
|''eg1''
|[[Os01g0900400]]
|10.1111/j.1365-313X.2008.03710.x
|
*A putative lipase gene EXTRA GLUME1 regulates both empty-glume fate and spikelet development in rice
|-
|229
|''pla2''
|[[Os01g0907900]]
|10.1105/tpc.105.037622
|
*Annotated
|-
|230
|''lhd2''
|[[Os01g0907900]]
|10.1038/sj.cr.7310034
|
*Annotated
|-
|231
|''C3H12''
|[[Os01g0917400]]
|10.1104/pp.111.191379
|
*A CCCH-Type Zinc Finger Nucleic Acid-Binding Protein Quantitatively Confers Resistance against Rice Bacterial Blight Disease
|-
|232
|''msp1''
|[[Os01g0917500]]
|10.1105/tpc.012401
|
*The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice
|-
|233
|''OsFRDL4''
|[[Os01g0919100]]
|10.1111/j.1365-313X.2011.04757.x
|
*An Al-inducible MATE gene is involved in external detoxification of Al in rice
|-
|234
|''OsSSI2''
|[[Os01g0919900]]
|10.1094/MPMI-22-7-0820
|
*Annotation
|-
|235
|''OsMADS51''
|[[Os01g0922800]]
|10.1104/pp.107.103291
|
*Annotated
|-
|236
|''se13''
|[[Os01g0949400]]
|10.1007/s00122-010-1426-2
|
*Complete loss of photoperiodic response in the rice mutant line X61 is caused by deWciency of phytochrome chromophore biosynthesis gene
|-
|237
|''LCD''
|[[Os01g0956700]]
|10.1093/jxb/err300
|
*Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice
|-
|238
|''cde1(t)''
|[[Os02g0121000]]
|10.1007/s00425-007-0525-z
|
*Identification and fine mapping of a thermo-sensitive chlorophyll deficient mutant in rice (Oryza sativa L.)
|-
|239
|''nrat1''
|[[Os02g0131800]]
|10.1073/pnas.1004949107
|
*Annotated
|-
|240
|''lc2''
|[[Os02g0152500]]
|10.1038/cr.2010.109
|
*Annotated
|-
|241
|''Oscand1''
|[[Os02g0167700]]
|10.1093/mp/ssq068
|
*OsCAND1 Is Required for Crown Root Emergence in Rice
|-
|242
|''osgl1-2''
|[[Os02g0178800]]
|10.1007/s11103-009-9483-0
|
*Annotated
|-
|244
|''b-OsLCY''
|[[Os02g0190600]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|245
|''Docs1''
|[[Os02g0236100]]
|10.1111/j.1365-313X.2011.04824.x
|
*A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
|-
|246
|''ep3''
|[[Os02g0260200]]
|10.1007/s00122-009-1151-x
|
*Annotated
|-
|247
|''lp''
|[[Os02g0260200]]
|10.1111/j.1467-7652.2011.00610.x
|
*Annotated
|-
|248
|''oscps1''
|[[Os02g0278700]]
|10.1104/pp.103.033696
|
*An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|249
|''naat1''
|[[Os02g0306401]]
|10.1104/pp.107.107912
|
*Mutation in Nicotianamine Aminotransferase Stimulated the Fe(II) Acquisition System and Led to Iron Accumulation in Rice
|-
|250
|''api5''
|[[Os02g0313400]]
|10.1105/tpc.110.082636
|
*Annotated
|-
|251
|''cfl1''
|[[Os02g0516400]]
|10.1105/tpc.111.088625
|
*Annotated
|-
|252
|''osgtgamma-1''
|[[Os02g0542400]]
|10.1007/s00438-009-0507-x
|
*Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses
|-
|253
|''Oscyt-inv1''
|[[Os02g0550600]]
|10.1007/s00425-008-0718-0
|
*OsCYT-INV1 for alkaline/neutral invertase is involved in root cell development and reproductivity in rice (Oryza sativa L.)
|-
|254
|''cpt1''
|[[Os02g0568200]]
|10.1105/tpc.104.028357
|
*The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin
|-
|255
|''rss1''
|[[Os02g0606700]]
|10.1038/ncomms1279
|
*Annotated
|-
|256
|''OsCOL4''
|[[Os02g0610500]]
|10.1111/j.1365-313X.2010.04226.x
|
*Annotated
|-
|257
|''du3''
|[[Os02g0612300]]
|10.5511/plantbiotechnology.25.483
|
*Du3, a mRNA cap-binding protein gene, regulates amylose content in Japonica rice seeds
|-
|258
|''bc14''
|[[Os02g0614100]]
|10.1073/pnas.1016144108
|
*Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice
|-
|260
|''oul1''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|
|-
|261
|''Roc5''
|[[Os02g0674800]]
|10.1104/pp.111.176016
|
*Annotated
|-
|262
|''mfo1''
|[[Os02g0682200]]
|10.1105/tpc.109.068742
|
*Annotated
|-
|263
|''osmads6''
|[[Os02g0682200]]
|10.1111/j.1365-313X.2010.04354.x
|
*Annotated
|-
|265
|''adl1''
|[[Os02g0709400]]
|10.1016/j.ydbio.2009.07.042
|
*Annotated
|-
|266
|''OsGS1;1''
|[[Os02g0735200]]
|10.1111/j.1365-313X.2011.04506.x
|
*Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
|-
|268
|''bc3''
|[[Os02g0738900]]
|10.1007/s00425-010-1145-6
|
*Annotated
|-
|269
|''dsm1''
|[[Os02g0743500]]
|10.1104/pp.109.149856
|
*Annotated
|-
|270
|''lsi1''
|[[Os02g0745100]]
|10.1038/nature04590
|
*A silicon transporter in rice
|-
|271
|''OsbZIP23''
|[[Os02g0766700]]
|10.1104/pp.108.128199
|
*Annotated
|-
|272
|''pps''
|[[Os02g0771100]]
|10.1105/tpc.111.083436
|
*The COP1 Ortholog PPS Regulates the Juvenile–Adult and Vegetative–Reproductive Phase Changes in Rice
|-
|273
|''Ossgo1''
|[[Os02g0799100]]
|10.1111/j.1365-313X.2011.04615.x
|
*Annotated
|-
|274
|''Ospho1;2''
|[[Os02g0809800]]
|10.1104/pp.109.149872
|
*Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
|-
|275
|''osmyoXIB''
|[[Os02g0816900]]
|10.1016/j.ydbio.2007.01.008
|
*ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
|-
|276
|''rtbp1''
|[[Os02g0817800]]
|10.1105/tpc.107.051953
|
*Suppression of RICE TELOMERE BINDING PROTEIN1 Results in Severe and Gradual Developmental Defects Accompanied by Genome Instability in Rice
|-
|277
|''lpa1''
|[[Os02g0819400]]
|10.1007/s00122-008-0818-z
|
*The rice OsLpa1 gene encodes a novel protein involved in phytic acid metabolism
|-
|278
|''dh1''
|[[Os02g0820500]]
|10.1007/s11103-007-9283-3
|
*DH1, a LOB domain-like protein required for glume formation in rice
|-
|279
|''Osa8''
|[[Os03g0100800]]
|10.1093/jxb/ern298
|
*Annotated
|-
|280
|''pair1''
|[[Os03g0106300]]
|10.1105/tpc.020701
|
*The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis
|-
|281
|''lsi2''
|[[Os03g0107300]]
|10.1038/nature05964
|
*An efflux transporter of silicon in rice
|-
|282
|''rim1''
|[[Os03g0119966]]
|10.1111/j.1365-313X.2008.03712.x
|
*Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus
|-
|283
|''osmads50''
|[[Os03g0122600]]
|10.1111/j.1365-313X.2004.02082.x
|
*Annotated
|-
|284
|''dsm2''
|[[Os03g0125100]]
|10.1104/pp.110.163741
|
*Annotated
|-
|285
|''OsCYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0028069
|
*Annotated
|
|-
|286
|''XS-lpa2-1''
|[[Os03g0142800]]
|10.1007/s00122-009-1018-1
|
*Annotated
|-
|287
|''arl1''
|[[Os03g0149100]]
|10.1111/j.1365-313X.2005.02434.x
|
*Annotated
|-
|288
|''crl1''
|[[Os03g0149100]]
|10.1105/tpc.105.030981
|
*Annotated
|-
|289
|''OsEDR1''
|[[Os03g0160100]]
|10.1111/j.1365-3040.2010.02219.x
|
*OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce
|-
|290
|''oscow1''
|[[Os03g0162000]]
|10.1007/s11103-007-9203-6
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|291
|''nal7''
|[[Os03g0162000]]
|10.1007/s00438-008-0328-3
|
*NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|-
|292
|''dpw''
|[[Os03g0167600]]
|10.1105/tpc.111.087528
|
*Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
|-
|293
|''cyp704B2''
|[[Os03g0168600]]
|10.1105/tpc.109.070326
|Annotated
|Development
|-
|294
|''oni1''
|[[Os03g0181500]]
|10.1111/j.1365-313X.2011.04530.x
|
*Annotated
|-
|295
|''OsPDS''
|[[Os03g0184000]]
|10.1111/j.1365-313X.2008.03411.x
|
*Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|296
|''gid2''
|[[Os03g0196500]]
|10.1126/science.1081077
|
*Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
|-
|297
|''d88''
|[[Os03g0203200]]
|10.1007/s11103-009-9522-x
|
*Annotated
|-
|298
|''htd2''
|[[Os03g0203200]]
|10.1007/s00425-009-0975-6
|
*Annotated
|-
|299
|''d14''
|[[Os03g0203200]]
|10.1093/pcp/pcp091
|
*Annotated
|-
|300
|''dl''
|[[Os03g0215200]]
|10.1105/tpc.018044
|Annotated
|-
|301
|''lhs1''
|[[Os03g0215400]]
|10.1105/tpc.12.6.871
|
* Annotated
|-
|302
|''OsFRDL1''
|[[Os03g0216700]]
|10.1104/pp.108.128132
|
* OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice
|-
|303
|''dsm3''
|[[Os03g0230500]]
|10.1007/s11103-011-9830-9
|
* Annotated
|-
|304
|''Osapc6''
|[[Os03g0236966]]
|10.1007/s10142-009-0155-6
|
* A candidate gene OsAPC6 of anaphase-promoting complex of rice identified through T-DNA insertion
|-
|305
|''rcn1''
|[[Os03g0281900]]
|10.1111/j.1469-8137.2008.02724.x
|
* Annotated
|-
|306
|''mit''
|[[Os03g0296800]]
|10.1038/ncomms1326
|
* The rice mitochondrial iron transporter is essential for plant growth
|-
|307
|''ssd1''
|[[Os03g0302900]]
|10.2183/pjab.86.265
|
* SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice
|-
|308
|''phyB''
|[[Os03g0309200]]
|10.1105/tpc.105.035899
|
* Annotated
|-
|309
|''oscipk31''
|[[Os03g0319400]]
|10.1007/s10059-010-0084-1
|Annotated
|-
|310
|''v2''
|[[Os03g0320900]]
|10.1111/j.1365-313X.2007.03251.x
|
* The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria
|-
|311
|''OschlH''
|[[Os03g0323200]]
|10.1093/pcp/pcg064
|
* Characterization of a Rice Chlorophyll-Deficient Mutant Using the T-DNA Gene-Trap System
|-
|312
|''glu1''
|[[Os03g0329500]]
|10.1007/s11103-005-2972-x
|
* Annotated
|-
|313
|''cwa1/bc1''
|[[Os03g0416200]]
|10.1007/s00425-010-1171-4
|
* Isolation of a novel cell wall architecture mutant of rice with defective Arabidopsis COBL4 ortholog BC1 required for regulated deposition of secondary cell wall components
|-
|314
|''glup4''
|[[Os03g0427300]]
|10.1270/jsbbs.60.556
|
* Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm
|-
|315
|''OsAGO7''
|[[Os03g0449200]]
|10.1007/s00425-006-0472-0
|
* Annotated
|-
|316
|''shl4/sho2''
|[[Os03g0449200]]
|10.1073/pnas.0704339104
|
* Annotated
|-
|317
|''chl9''
|[[Os03g0563300]]
|10.1007/s11103-006-9024-z
|
* Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development
|-
|318
|''pez1''
|[[Os03g0571900]]
|10.1074/jbc.M111.221168
|
* A Rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele
|-
|321
|''OsIAA11''
|[[Os03g0633500]]
|10.1093/mp/ssr074
|
* A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice
|-
|322
|''Osam1''
|[[Os03g0650400]]
|10.1038/cr.2011.7
|
* OsAM1 is required for leptotene-zygotene transition in rice
|-
|323
|''nol1''
|[[Os03g0654600]]
|10.1111/j.1365-313X.2008.03670.x
|
* Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice
|-
|324
|''v1''
|[[Os03g0656900]]
|10.1111/j.1365-313X.2011.04755.x
|
* Annotated
|-
|325
|''crl4''
|[[Os03g0666100]]
|10.3117/plantroot.2.19
|
* CRL4 regulates crown root formation through auxin transport in rice
|-
|327
|''fc1/OsTB1''
|[[Os03g0706500]]
|10.1046/j.1365-313X.2003.01648.x
|
* Annotated
|-
|328
|''slr1''
|[[Os03g0707600]]
|10.1105/tpc.13.5.999
|
* Annotated
|-
|329
|''Slr1-d''
|[[Os03g0707600]]
|10.1007/s00438-008-0406-6
|
* Annotated
|-
|330
|''phyA''
|[[Os03g0719800]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|331
|''OsMIK''
|[[Os03g52760]]
|10.1007/s00122-008-0863-7
|
* Isolation and characterization of a low phytic acid rice mutant reveals a mutation in the rice orthologue of maize MIK
|-
|332
|''phyC''
|[[Os03g0752100]]
|10.1105/tpc.105.035899
|
* Distinct and Cooperative Functions of Phytochromes A, B, and C in the Control of Deetiolation and Flowering in Rice
|-
|333
|''pap2''
|[[Os03g0753100]]
|10.1093/pcp/pcp166
|
* Annotated
|-
|334
|''osmads34''
|[[Os03g0753100]]
|10.1104/pp.110.156711
|
* Annotated
|-
|335
|''pho1''
|[[Os03g0758100]]
|10.1105/tpc.107.054007
|
* Mutation of the Plastidial a-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
|-
|336
|''bel''
|[[Os03g0760200]]
|10.1007/s11103-006-0058-z
|
* Annotated
|-
|337
|''DST''
|[[Os03g0786400]]
|10.1101/gad.1812409
|
* Annotated
|-
|338
|''pla3/gp''
|[[Os03g0790600]]
|10.1111/j.1365-313X.2009.03841.x
|
* PLASTOCHRON3/GOLIATH encodes a glutamate carboxypeptidase required for proper development in rice
|-
|339
|''el1''
|[[Os03g0793500]]
|10.1038/emboj.2010.75
|
* Annotated
|-
|340
|''chl1''
|[[Os03g0811100]]
|10.1007/s11103-006-9024-z
|
* Annotated
|-
|341
|''OsIDS1''
|[[Os03g0818800]]
|10.1111/j.1365-313X.2011.04804.x
|
* Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice
|-
|342
|''Xb15''
|[[Os03g0821300]]
|10.1371/journal.pbio.0060231
|
* Rice XB15, a Protein Phosphatase 2C, Negatively Regulates Cell Death and XA21-Mediated Innate Immunity Chang
|-
|343
|''Os-castor''
|[[Os03g0843600]]
|10.1104/pp.108.131540
|
* Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants
|-
|345
|''etr2''
|[[Os04g0169100]]
|10.1105/tpc.108.065391
|
* The Ethylene Receptor ETR2 Delays Floral Transition and Affects Starch Accumulation in Rice
|-
|346
|''OsYSL6''
|[[Os04g0390500]]
|10.1104/pp.111.186031
|* OsYSL6 Is Involved in the Detoxification of Excess Manganese in Rice1[W][OA]
|-
|347
|''lax2''
|[[Os04g0396500]]
|10.1105/tpc.111.088765
|
* LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems
|-
|348
|''ACL1''
|[[Os04g0415000]]
|10.1093/mp/ssq022
|
* Annotated
|-
|349
|''zep1''
|[[Os04g0452500]]
|10.1105/tpc.109.070789
|
* Annotated
|-
|350
|''tdd1''
|[[Os04g0463500]]
|10.1111/j.1365-313X.2009.03952.x
|
* A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos
|-
|351
|''d11''
|[[Os04g0469800]]
|10.1105/tpc.104.024950
|
* Annotated
|-
|352
|''OsGLU3''
|[[Os04g0497200]]
|10.1093/mp/ssr084
|
* OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.)
|-
|353
|''OsDCL4''
|[[Os04g0509300]]
|10.1105/tpc.107.052209
|
* Oryza sativa Dicer-like4 Reveals a Key Role for Small Interfering RNA Silencing in Plant Development
|-
|355
|''TOB1''
|[[Os04g0536300]]
|10.1105/tpc.111.094797
|
* The YABBY Gene TONGARI-BOUSHI1 Is Involved in Lateral Organ Development and Maintenance of Meristem Organization in the Rice Spikelet
|-
|356
|''Osvpe1''
|[[Os04g0537900]]
|10.1111/j.1365-313X.2009.03801.x
|
* The vacuolar processing enzyme OsVPE1 is required for efficient glutelin processing in rice
|-
|357
|''d17''
|[[Os04g0550600]]
|10.1038/nature07272
|
* Inhibition of shoot branching by new terpenoid plant hormones
|-
|359
|''OsCPK12''
|[[Os04g0560600]]
|10.1111/j.1365-313X.2011.04766.x
|
* Annotated
|-
|360
|''glr3.1''
|[[Os04g0585200]]
|10.1105/tpc.105.037713
|
* Annotated
|-
|361
|''apo2''
|[[Os04g0598300]]
|10.1111/j.1365-313X.2011.04781.x
|
* ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1
|-
|362
|''rlin1''
|[[Os04g0610800]]
|10.1016/j.jcg.2010.12.001
|
* RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice
|-
|363
|''osks1''
|[[Os04g0611800]]
|10.1104/pp.103.033696
|
* An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
|-
|364
|''fc1''
|[[Os04g0612700]]
|10.1007/s11103-008-9448-8
|
* FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice
|-
|366
|''ili1''
|[[Os04g0641700]]
|10.1105/tpc.109.070441
|
* Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis
|-
|367
|''flo2''
|[[Os04g0645100]]
|10.1105/tpc.109.070821
|
* Annotation
|-
|368
|''OsCP1''
|[[Os04g0670500]]
|10.1023/B:PLAN.0000040904.15329.29
|
* Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system
|-
|369
|''OsARF12''
|[[Os04g0671900]]
|10.1111/j.1469-8137.2011.03910.x
|
* Annotation
|-
|370
|''OsMKP1''
|[[Os05g0115800]]
|10.1093/pcp/pcm007
|
* A Calmodulin-Binding Mitogen-Activated Protein Kinase Phosphatase is Induced by Wounding and Regulates the Activities of Stress-Related Mitogen-Activated Protein Kinases in Rice
|-
|371
|''rsr1''
|[[Os05g0121600]]
|10.1104/pp.110.159517
|
* Coexpression Analysis Identifies Rice Starch Regulator1, a Rice AP2/EREBP Family Transcription Factor, as a Novel Rice Starch Biosynthesis Regulator1
|-
|372
|''siz1''
|[[Os05g0125000]]
|10.1111/j.1469-8137.2010.03538.x
|
* Annotation
|-
|373
|''srs3''
|[[Os05g0154700]]
|10.1093/pcp/pcq092
|
* Annotation
|-
|374
|''bc10''
|[[Os05g0170000]]
|10.1111/j.1365-313X.2008.03703.x
|
* BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.)
|-
|375
|''mads58''
|[[Os05g0203800]]
|10.1105/tpc.111.087262
|
* ??Rice MADS6 Interacts with the Floral Homeotic Genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in Specifying Floral Organ Identities and Meristem Fate
|-
|376
|''d1''
|[[Os05g0333200]]
|10.1073/pnas.96.18.10284
|
* Annotation
|-
|377
|''ygl1''
|[[Os05g0349700]]
|10.1104/pp.107.100321
|
* Annotation
|-
|378
|''OsImpβ1''
|[[Os05g0353400]]
|10.1007/s10059-011-2321-7
|
* Rice Importin β1 Gene Affects Pollen Tube Elongation
|-
|379
|''osbc1l4''
|[[Os05g0386800]]
|10.1007/s11103-009-9537-3
|
* Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice
|-
|380
|''flo4''
|[[Os05g0405000]]
|10.1111/j.1365-313X.2005.02423.x
|
* White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB)
|-
|382
|''gid1''
|[[Os05g0407500]]
|10.1038/nature04028
|
* Annotation
|-
|383
|''DNG701''
|[[Os05g0446000]]
|10.1073/pnas.1112704108
|
* A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice
|-
|384
|''bgl''
|[[Os05g0454200]]
|10.1007/s11103-011-9839-0
|
* The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces
|-
|385
|''oszip5''
|[[Os05g0472700]]
|10.1007/s11103-010-9637-0
|
* OsZIP5 is a plasma membrane zinc transporter in rice
|-
|386
|''eui1''
|[[Os05g0482400]]
|10.1093/pcp/pci233
|
* Annotation
|-
|389
|''spl7''
|[[Os05g0530400]]
|10.1073/pnas.112209199
|
* Annotation
|-
|390
|''snrk1a''
|[[Os05g0530500]]
|10.1105/tpc.105.037887
|
* The SnRK1A Protein Kinase Plays a Key Role in Sugar Signaling during Germination and Seedling Growth of Rice
|-
|391
|''ltn1''
|[[Os05g0557700]]
|10.1104/pp.110.170209
|
*Annotated
|-
|392
|''nl1''
|[[Os05g0578900]]
|10.1038/cr.2009.36
|
* NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice
|-
|393
|''Osrec8''
|[[Os05g0580500]]
|10.1104/pp.111.177428
|
* Annotated
|-
|394
|''osjar1''
|[[Os05g0586200]]
|10.1111/j.1365-3040.2008.01790.x
|
* Annotated
|-
|395
|''Osexpa17''
|[[Os06g0108600]]
|10.1111/j.1365-313X.2011.04533.x
|
* Root hair-specific expansins modulate root hair elongation in rice
|-
|398
|''zn''
|[[Os06g0116400]]
|10.1111/j.1365-313X.2010.04183.x
|
* ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development
|-
|399
|''osbbi1''
|[[Os06g0125800]]
|10.1038/cr.2011.4
|
* Annotated
|-
|400
|''d62/dlt''
|[[Os06g0127800]]
|10.1007/s00425-010-1263-1
|
* Annotated
|-
|402
|''sik1''
|[[Os06g0130100]]
|10.1111/j.1365-313X.2010.04146.x
|
* Annotated
|-
|403
|''dp1''
|[[Os06g0136900]]
|10.1016/j.ydbio.2011.08.023
|
* An AT-hook gene is required for palea formation and floral organ number control in rice
|-
|404
|''d3''
|[[Os06g0154200]]
|10.1093/pcp/pci022
|
* Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
|-
|405
|''OsSSI''
|[[Os06g0160700]]
|10.1104/pp.105.071845
|
* Annotated
|-
|406
|''v3''
|[[Os06g0168600]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|407
|''aid1''
|[[Os06g0181300]]
|10.1104/pp.104.041459
|
* The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice
|-
|408
|''abl1''
|[[Os06g0211200]]
|10.1104/pp.111.173427
|
* Annotated
|-
|409
|''Osabf2''
|[[Os06g0211200]]
|10.1016/j.jplph.2010.05.008
|
* Annotated
|-
|410
|''lsi6''
|[[Os06g0228200]]
|10.1105/tpc.108.059311
|
* A Transporter Regulating Silicon Distribution in Rice Shoots
|-
|411
|''st1''
|[[Os06g0257450]]
|10.1104/pp.109.136648
|
* Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
|-
|412
|''nyc3''
|[[Os06g0354700]]
|10.1111/j.1365-313X.2009.03919.x
|
* Defect in non-yellow coloring 3, an a/b hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice
|-
|413
|''d35''
|[[Os06g0569500]]
|10.1023/B:PLAN.0000038261.21060.47
|
* Annotated
|-
|414
|''OsIAA23''
|[[Os06g0597000]]
|10.1111/j.1365-313X.2011.04698.x
|
* Annotated
|-
|415
|''se5''
|[[Os06g0603000]]
|10.1046/j.1365-313X.2000.00753.x
|
* Annotated
|-
|416
|''moc1''
|[[Os06g0610350]]
|10.1038/nature01518
|
* Annotated
|-
|417
|''spp''
|[[Os06g0625400]]
|10.1093/pcp/pcq012
|
* A Rice Stromal Processing Peptidase Regulates Chloroplast and Root Development
|-
|418
|''apo1''
|[[Os06g0665400]]
|10.1111/j.1365-313X.2007.03200.x
|
* Rice ABERRANT PANICLE ORGANIZATION 1, encoding an F-box protein, regulates meristem fate
|-
|419
|''oshma9''
|[[Os06g0665800]]
|10.1104/pp.107.102236
|
* Annotated
|-
|420
|''dep3''
|[[Os06g0677000]]
|10.1007/s00122-011-1543-6
|
* Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.)
|-
|421
|''star1''
|[[Os06g0695800]]
|10.1105/tpc.108.064543
|
* Annotated
|-
|422
|''OsHMA2''
|[[Os06g0700700]]
|10.1093/pcp/pcr166
|
* Annotated
|-
|423
|''oshkt2;1''
|[[Os06g0701700]]
|10.1038/sj.emboj.7601732
|
* Annotated
|-
|424
|''spw1''
|[[Os06g0712700]]
|10.1242/dev.00294
|
* Annotated
|-
|425
|''fon1''
|[[Os06g0717200]]
|10.1242/dev.01441
|
* The gene FLORAL ORGAN NUMBER1 regulates floral meristem size in rice and encodes a leucine-rich repeat receptor kinase orthologous to Arabidopsis CLAVATA1
|-
|426
|''ila1''
|[[Os06g0724900]]
|10.1105/tpc.111.093419
|
* Annotated
|-
|427
|''GA2ox5''
|[[Os07g0103500]]
|10.1105/tpc.108.060913
|
* A Novel Class of Gibberellin 2-Oxidases Control Semidwarfism, Tillering, and Root Development in Rice
|-
|428
|''crl5''
|[[Os07g0124700]]
|10.1111/j.1365-313X.2011.04610.x
|
|* Finished
|-
|429
|''g1''
|[[Os07g0139300]]
|10.1073/pnas.0907896106
|
* The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet
|-
|430
|''waf1''
|[[Os07g0164000]]
|10.1104/pp.110.160234
|
* Annotated
|-
|431
|''osku70''
|[[Os07g0184900]]
|10.1104/pp.109.150391
|
* OsKu70 Is Associated with Developmental Growth and Genome Stability in Rice
|-
|432
|''OsPHF1''
|[[Os07g0187700]]
|10.1104/pp.111.181669
|
* OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice
|-
|433
|''STR2''
|[[Os07g0191600]]
|10.1111/j.1365-313X.2011.04842.x
|
* The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice
|-
|434
|''OsZDS''
|[[Os07g0204900]]
|10.1111/j.1365-313X.2008.03411.x
|
* Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice
|-
|435
|''sh-h''
|[[Os07g0207700]]
|10.1111/j.1365-313X.2009.04039.x
|
* Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice
|-
|436
|''OsZIP8''
|[[Os07g0232800]]
|10.1007/s10059-010-0069-0
|
* Zinc Deficiency-Inducible OsZIP8 Encodes a Plasma Membrane-Localized Zinc Transporter in Rice
|-
|437
|''snb''
|[[Os07g0235800]]
|10.1111/j.1365-313X.2006.02941.x
|
* The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem
|-
|438
|''oscbt''
|[[Os07g0490200]]
|10.1007/s10059-009-0081-4
|
* The Calmodulin-Binding Transcription Factor OsCBT Suppresses Defense Responses to Pathogens in Rice
|-
|439
|''oswrky78''
|[[Os07g0583700]]
|10.1007/s00425-011-1423-y
|
* The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice
|-
|440
|''bui1''
|[[Os07g0596300]]
|10.1105/tpc.110.081802
|
* Annotated
|-
|441
|''dep2''
|[[Os07g0616000]]
|10.1038/cr.2010.69
|
* Annotated
|-
|442
|''srs1''
|[[Os07g0616000]]
|10.1266/ggs.85.327
|
* Annotated
|-
|445
|''rth1''
|[[Os07g0682800]]
|10.1270/jsbbs.59.13
|
* Annotated
|-
|446
|''wox11''
|[[Os07g0684900]]
|10.1105/tpc.108.061655
|
* The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice
|-
|447
|''OsNAS3''
|[[Os07g0689600]]
|10.1073/pnas.0910950106
|
* Iron fortification of rice seeds through activation of the nicotianamine synthase gene
|-
|448
|''ehd3''
|[[Os08g0105000]]
|10.1111/j.1365-313X.2011.04517.x
|
* Annotated
|-
|449
|''pss1''
|[[Os08g0117000]]
|10.1105/tpc.109.073692
|
* Annotated
|-
|450
|''cyp703a3''
|[[Os08g0131100]]
|10.1105/tpc.108.062935
|
* Annotated
|-
|451
|''crr6''
|[[Os08g0167500]]
|10.1111/j.1365-313X.2011.04747.x
|
* Annotated
|-
|453
|''ss3a''
|[[Os08g0191433]]
|10.1093/jxb/err125
|
* Annotated
|-
|454
|''osagps2''
|[[Os08g0345800]]
|10.1007/s11103-007-9153-z
|
* Annotated
|-
|455
|''GF14c''
|[[Os08g0430500]]
|10.1093/pcp/pcp012
|
* The 14-3-3 Protein GF14c Acts as a Negative Regulator of Flowering in Rice by Interacting with the Florigen Hd3a
|-
|456
|''coe1''
|[[Os08g0442700]]
|10.1111/j.1365-313X.2010.04250.x
|
* COE1, an LRR–RLK responsible for commissural vein pattern formation in rice
|-
|457
|''bc12''
|[[Os09g0114500]]
|10.1111/j.1365-313X.2010.04238.x
|
* Annotated
|-
|458
|''gdd1''
|[[Os09g0114500]]
|10.1105/tpc.110.081901
|
* Annotated
|-
|459
|''sll1''
|[[Os09g0395300]]
|10.1105/tpc.108.061457
|
* Annotated
|-
|460
|''rl9''
|[[Os09g0395300]]
|10.1007/s11103-008-9365-x
|
* Annotated
|-
|461
|''STR1''
|[[Os09g0401100]]
|10.1111/j.1365-313X.2011.04842.x
|
* Annotated
|-
|462
|''rep1''
|[[Os09g0410500]]
|10.1104/pp.108.128231
|
* RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice
|-
|463
|''bc6''
|[[Os09g0422500]]
|10.1093/jxb/erq395
|
* Annotated
|-
|464
|''OsCesA9''
|[[Os09g0422500]]
|10.1104/pp.103.022442
|
* Annotated
|-
|465
|''osgl1-1''
|[[Os09g0426800]]
|10.1093/mp/ssr028
|
* Annotated
|-
|466
|''wsl2''
|[[Os09g0426800]]
|10.1007/s00425-011-1481-1
|
* Annotated
|-
|470
|''PTC1''
|[[Os09g0449000]]
|10.1104/pp.111.175760
|
* Annotated
|-
|471
|''aco1''
|[[Os09g0451000]]
|10.1111/j.1365-3040.2009.02106.x
|
* ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice
|-
|472
|''isa3''
|[[Os09g0469400]]
|10.1093/pcp/pcr058
|
* Rice Debranching Enzyme Isoamylase3 Facilitates Starch Metabolism and Affects Plastid Morphogenesis
|-
|473
|''gna1''
|[[Os09g0488000]]
|10.1104/pp.104.058248
|
* A Novel Short-Root Gene Encodes a Glucosamine-6-Phosphate Acetyltransferase Required for Maintaining Normal Root Cell Shape in Rice
|-
|474
|''PAIR2''
|[[Os09g0506800]]
|10.1007/s00438-003-0934-z
|
* An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis
|-
|475
|''sgr''
|[[Os09g0532000]]
|10.1105/tpc.106.044891
|
* The Senescence-Induced Staygreen Protein Regulates Chlorophyll Degradation
|-
|476
|''OsAT1/Spl18''
|[[Os10g0195600]]
|10.1007/s11103-006-9130-y
|
* Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice
|-
|477
|''brd2''
|[[Os10g0397400]]
|10.1105/tpc.105.030973
|
* Annotated
|-
|478
|''pla1''
|[[Os10g0403000]]
|10.1073/pnas.2636936100
|
* Annotated
|-
|479
|''pair3''
|[[Os10g0405500]]
|10.1111/j.1365-313X.2009.03870.x
|
* Annotated
|-
|480
|''ehd2''
|[[Os10g0419200]]
|10.1104/pp.108.125542
|
* Annotated
|-
|481
|''rid1''
|[[Os10g0419200]]
|10.1073/pnas.0806019105
|
* Annotated
|-
|482
|''OsCesA7''
|[[Os10g0467800]]
|10.1104/pp.103.022442
|
* Annotated
|-
|483
|''wda1''
|[[Os10g0471100]]
|10.1105/tpc.106.042044
|
* Wax-deficient anther1 Is Involved in Cuticle and Wax Production in Rice Anther Walls and Is Required for Pollen Development
|-
|484
|''OsMPK6''
|[[Os10g0533600]]
|10.1007/s00425-007-0541-z
|
* Annotated
|-
|485
|''OsCAO1''
|[[Os10g0567200]]
|10.1007/s11103-005-2066-9
|
* Annotated
|-
|486
|''cao''
|[[Os10g0567400]]
|10.1270/jsbbs.55.361
|
* Annotated
|-
|487
|''jmj6''
|[[Os10g0577600]]
|10.1073/pnas.0805901105
|
* Annotated
|-
|488
|''OsCSLD1''
|[[Os10g0578200]]
|10.1104/pp.106.091546
|
* OsCSLD1, a Cellulose Synthase-Like D1 Gene, Is Required for Root Hair Morphogenesis in Rice
|-
|489
|''phot1a''
|[[Os11g0102200]]
|10.1007/s11103-008-9442-1
|
* Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth
|-
|490
|''OsPK1''
|[[Os11g0148500]]
|10.1007/s00425-011-1471-3
|
* Annotated
|-
|491
|''PDIL1''
|[[Os11g0199200]]
|10.1093/jxb/err262
|
* The failure to express a protein disulphide isomerase-like protein results in a floury endosperm and an endoplasmic reticulum stress response in rice
|-
|492
|''rad''
|[[Os11g0210300]]
|10.1270/jsbbs.56.69
|
* Annotated
|-
|493
|''sp1''
|[[Os11g0235200]]
|10.1111/j.1365-313X.2009.03799.x
|
* Annotated
|-
|494
|''Tid1''
|[[Os11g0247300]]
|10.1266/ggs.84.209
|
* Annotated
|-
|495
|''nls1-1D''
|[[Os11g0249000]]
|10.1111/j.1365-313X.2011.04557.x
|
* Annotated
|-
|496
|''lazy1''
|[[Os11g0490600]]
|10.1038/cr.2007.38
|
* Annotated
|-
|497
|''osarf1''
|[[Os11g0523800]]
|10.1007/s11103-009-9474-1
|
* Annotated
|-
|498
|''tld1-D''
|[[Os11g0528700]]
|10.1104/pp.109.146803
|
* Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation
|-
|501
|''d27''
|[[Os11g0587000]]
|10.1105/tpc.109.065987
|
* Annotated
|-
|502
|''fon2''
|[[Os11g0595400]]
|10.1093/pcp/pcl025
|
* Conservation and Diversification of Meristem Maintenance Mechanism in Oryza sativa: Function of the FLORAL ORGAN NUMBER2 Gene
|-
|503
|''wdl1''
|[[Os11g0708400]]
|10.1007/s11103-010-9656-x
|
* Mutation in Wilted Dwarf and Lethal 1 (WDL1) causes abnormal cuticle formation and rapid water loss in rice
|-
|504
|''rip1''
|[[Os12g0132400]]
|10.1093/pcp/pcl013
|
* Rice Immature Pollen 1 (RIP1) is a Regulator of Late Pollen Development
|-
|505
|''art1''
|[[Os12g0170400]]
|10.1105/tpc.109.070771
|
* A Zinc Finger Transcription Factor ART1 Regulates Multiple Genes Implicated in Aluminum Tolerance in Rice
|-
|506
|''OsMADS13''
|[[Os12g0207000]]
|10.1111/j.1365-313X.2007.03272.x
|
* The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice
|-
|507
|''ogr1''
|[[Os12g0270200]]
|10.1111/j.1365-313X.2009.03909.x
|
* Rice OGR1 encodes a pentatricopeptide repeat–DYW protein and is essential for RNA editing in mitochondria
|-
|508
|''osatg10b''
|[[Os12g0506800]]
|10.1007/s10059-009-0006-2
|
* Annotated
|-
|509
|''kch1''
|[[Os12g0547500]]
|10.1093/jxb/erq164
|
* A kinesin with calponin-homology domain is involved in premitotic nuclear migration
|-
|513
|''spl11''
|[[Os12g0570000]]
|10.1105/tpc.108.058610
|
* SPIN1, a K Homology Domain Protein Negatively Regulated and Ubiquitinated by the E3 Ubiquitin Ligase SPL11, Is Involved in Flowering Time Control in Rice
|-
|514
|''mel2''
|[[Os12g0572800]]
|10.1371/journal.pgen.1001265
|
* A Novel RNA-Recognition-Motif Protein Is Required for Premeiotic G1/S-Phase Transition in Rice (Oryza sativa L.)
|-
|515
|''gpa1''
|[[Os12g0631100]]
|10.1111/j.1365-313X.2010.04370.x
|
* OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells
|-
|516
|''ossut2''
|[[Os12g0641400]]
|10.1104/pp.111.176982
|
* Annotated
|-
|517
|''d18''
|[[Os01g0177400]]
|10.1073/pnas.141239398
|
* Annotated
|-
|518
|''Gn1a''
|[[Os01g0197700]]
|10.1126/science.1113373
|
* Cytokinin Oxidase Regulates Rice Grain Production
|-
|520
|''SKC1''
|[[Os01g0307500]]
|10.1038/ng1643
|
* Annotated
|-
|521
|''PSR''
|[[Os01g0357100]]
|10.1073/pnas.0504220102
|
* Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems
|-
|522
|''SaF''
|[[Os01g0578500]]
|10.1073/pnas.0810108105
|
* Annotated
|-
|523
|''SaM''
|[[Os01g0578700]]
|10.1073/pnas.0810108105
|
* Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes
|-
|524
|''Rd''
|[[Os01g0633500]]
|10.1111/j.1365-313X.2006.02958.x
|
* The Rc and Rd genes are involved in proanthocyanidin synthesis in rice pericarp
|-
|525
|''Pi37''
|[[Os01g0781700]]
|10.1534/genetics.107.080648
|
* The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site–Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
|-
|526
|''qSH1''
|[[Os01g0848400]]
|10.1126/science.1126410
|
* Annotated
|-
|527
|''qNPQ1-2''
|[[Os01g0869800]]
|10.1073/pnas.1104809108
|
|Finished
|-
|528
|''sd1''
|[[Os01g0883800]]
|10.1038/416701a
|
* Annotated
|-
|529
|''GW2''
|[[Os02g0244100]]
|10.1038/ng2014
|
* Annotated
|-
|530
|''Rf2''
|[[Os02g0274000]]
|10.1111/j.1365-313X.2010.04427.x
|
* The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein
|-
|531
|''hbd2''
|[[Os02g0622100]]
|10.1007/s00438-010-0514-y
|
* Annotated
|-
|532
|''Pib''
|[[Os02g0818450]]
|10.1046/j.1365-313X.1999.00498.x
|
* The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes
|-
|533
|''qLTG3?1''
|[[Os03g0103300]]
|10.1073/pnas.0805303105
|
* Annotated
|-
|534
|''dth3''
|[[Os03g0122600]]
|10.1007/s00299-011-1129-4
|
* Annotated
|-
|535
|''GS3''
|[[Os03g0407400]]
|10.1007/s00122-006-0218-1
|
* Annotated
|-
|536
|''GRP162''
|[[Os03g0641300]]
|10.1105/tpc.111.093211
|
* The Rice Pentatricopeptide Repeat Protein RF5 Restores Fertility in Hong-Lian Cytoplasmic Male-Sterile Lines via a Complex with the Glycine-Rich Protein GRP162
|-
|537
|''LOX-3''
|[[Os03g0700400]]
| 10.1007/s12374-013-0085-7
|
* Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity
|-
|538
|''Hd6''
|[[Os03g0762000]]
|10.1073/pnas.111136798
|
* Annotated
|-
|539
|''Bph14''
|[[Os03g0848700]]
|10.1073/pnas.0912139106
|
* Annotated
|-
|541
|''Pi21''
|[[Os04g0401000]]
|10.1126/science.1175550
|
* Annotated
|-
|542
|''GIF1''
|[[Os04g0413500]]
|10.1038/ng.220
|
* Annotated
|-
|543
|''Rf17''
|[[Os04g0475900]]
|10.1073/pnas.0901860106
|
* Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants
|-
|544
|''BET1''
|[[Os04g0477300]]
|10.1104/pp.110.171470
|
* Suppression of a NAC-Like Transcription Factor Gene Improves Boron-Toxicity Tolerance in Rice
|-
|545
|''OSB2''
|[[Os04g0557500]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|546
|''OSB1''
|[[Os04g0557800]]
|10.1093/pcp/pce128
|
* The Purple leaf (Pl) Locus of Rice: the Plw Allele has a Complex Organization and Includes Two Genes Encoding Basic Helix-Loop-Helix Proteins Involved in Anthocyanin Biosynthesis
|-
|547
|''Xa1''
|[[Os04g0622600]]
|10.1073/pnas.95.4.1663
|
* Annotated
|-
|548
|''sh4''
|[[Os04g0670900]]
|10.1126/science.1123604
|
* Rice Domestication by Reducing Shattering
|-
|549
|''Xa5''
|[[Os05g0107700]]
|10.1094/MPMI.2004.17.12.1348
|
* Annotated
|-
|550
|''GS5''
|[[Os05g0158500]]
|10.1038/ng.977
|
* Annotated
|-
|551
|''GW5''
|[[DQ991205]]
|10.1038/cr.2008.307
|
* Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
|-
|552
|''qSW5''
|[[AB433345_DQ991205]]
|10.1038/ng.169
|
* Deletion in a gene associated with grain size increased yields during rice domestication
|-
|553
|''wx''
|[[Os06g0133000]]
|10.1046/j.1365-313X.1995.7040613.x
|
* Annotated
|-
|554
|''Hd3a''
|[[Os06g0157700]]
|10.1093/pcp/pcf156
|
* Annotated
|-
|555
|''DPL2''
|[[Os06g0184100]]
|10.1073/pnas.1003124107
|
* Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
|-
|556
|''S5''
|[[Os06g0213100]]
|10.1073/pnas.0804761105
|
* A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica–japonica hybrids in rice
|-
|557
|''ALK''
|[[Os06g0229800]]
|10.1111/j.1744-7909.2011.01065.x
|
* Annotated
|-
|558
|''Hd1''
|[[Os06g0275000]]
|10.1105/tpc.12.12.2473
|
* Annotated
|-
|559
|''Pi2''
|[[Os06g0286700]]
|10.1094/MPMI-19-1216
|
* Annotated
|-
|560
|''Pi9''
|[[Os06g0286700]]
|10.1534/genetics.105.044891
|
* Annotated
|-
|561
|''Pi25''
|[[Os06g0330100]]
|10.1016/j.jgg.2011.03.010
|
* Annotated
|-
|562
|''Pid3''
|[[Os06g0330100]]
|10.1534/genetics.109.102871
|
* Annotated
|-
|563
|''Pi-d2''
|[[Os06g0494100]]
|10.1111/j.1365-313X.2006.02739.x
|
* Annotated
|-
|564
|''Xa27''
|[[Os06g0598900]]
|10.1038/nature03630
|
* R gene expression induced by a type-III effector triggers disease resistance in rice
|-
|566
|''PROG1''
|[[Os07g0153600]]
|10.1038/ng.197
|
* Control of a key transition from prostrate to erect growth in rice domestication
|-
|567
|''Rc''
|[[Os07g0211500]]
|10.1105/tpc.105.038430
|
* Caught Red-Handed: Rc Encodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
|-
|569
|''OsHMA3''
|[[Os07g0232900]]
|10.1073/pnas.1005396107
|
* Annotated
|-
|571
|''Ghd7''
|[[Os07g0261200]]
|10.1038/ng.143
|
* Annotated
|-
|572
|''Sdr4''
|[[Os07g0585700]]
|10.1073/pnas.0911965107
|
* Annotated
|-
|573
|''Pi36''
|[[Os08g0150100]]
|10.1534/genetics.107.075465
|
* The in Silico Map-Based Cloning of Pi36, a Rice Coiled-Coil–Nucleotide-Binding Site–Leucine-Rich Repeat Gene That Confers Race-Specific Resistance to the Blast Fungus
|-
|574
|''DTH8''
|[[Os08g0174500]]
|10.1104/pp.110.156943
|
* Annotated
|-
|578
|''Badh2''
|[[Os08g0424500]]
|10.1105/tpc.108.058917
|
* Annotated
|-
|579
|''WFP''
|[[Os08g0509600]]
|10.1038/ng.592
|
* Annotated
|-
|580
|''IPA1''
|[[Os08g0509600]]
|10.1038/ng.591
|
* Annotated
|-
|581
|''xa13''
|[[Os08g0535200]]
|10.1101/gad.1416306
|
* Annotated
|-
|582
|''Sub1A''
|[[AAZ06207]]
|10.1038/nature04920
|
* Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|-
|584
|''DEP1''
|[[Os09g0441900]]
|10.1038/ng.352
|
* Annotated
|-
|585
|''TAC1''
|[[Os09g0529300]]
|10.1111/j.1365-313X.2007.03284.x
|
* Annotated
|-
|586
|''CPDphotolyase''
|[[Os10g0167600]]
|10.1093/pcp/pch215
|
* Annotated
|-
|588
|''Ehd1''
|[[Os10g0463400]]
|10.1101/gad.1189604
|
* Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
|-
|589
|''RF1A''
|[[Os10g0497300]]
|10.1105/tpc.105.038240
|
* Annotated
|-
|591
|''Rf-1''
|[[Os10g0497432]]
|10.1046/j.1365-313X.2003.01961.x
|
* Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.)
|-
|592
|''RF1B''
|[[Os10g0499500]]
|10.1105/tpc.105.038240
|
* Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing
|-
|593
|''Pia''
|[[Os11g0225100]]
|10.1111/j.1365-313X.2011.04502.x
|
* Annotated
|-
|594
|''Xa21''
|[[Os11g0559200]]
|10.1126/science.270.5243.1804
|
* Annotated
|-
|595
|''Pb1''
|[[Os11g0598500]]
|10.1111/j.1365-313X.2010.04348.x
|
* Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication
|-
|596
|''Pik1''
|[[Os11g0687800]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|597
|''Pik2''
|[[Os11g0687900]]
|10.1111/j.1469-8137.2010.03462.x
|
* The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication
|-
|599
|''Pik-p''
|[[Os11g0689100]]
|10.1007/s00122-010-1506-3
|
* The Pik-p resistance to Magnaporthe oryzae in rice is mediated by a pair of closely linked CC-NBS-LRR genes
|-
|600
|''Xa3''
|[[Os11g0692300]]
|10.1007/s00122-006-0388-x
|
* Annotated
|-
|601
|''Xa26''
|[[Os11g0692300]]
|10.1046/j.1365-313X.2003.01976.x
| Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein
|
|-
|602
|''Pi-ta''
|[[Os12g0281300]]
|10.1105/tpc.12.11.2033
| A Single Amino Acid Difference Distinguishes Resistant and Susceptible Alleles of the Rice Blast Resistance Gene Pi-ta
|
|-
|606
|''OsCOIN''
|[[Os01g0104100]]
|10.1007/s00425-007-0548-5
|
|Finished
|-
|607
|''OsIRL''
|[[Os01g0106400]]
|10.1111/j.1399-3054.2009.01290.x
|
|Finished
|-
|609
|''OsDREB2A''
|[[Os01g0165000]]
|10.1007/s10529-011-0620-x
|
|Finished
|-
|610
|''OsIAA1''
|[[Os01g0178500]]
|10.1007/s11103-009-9474-1
|
|Annotated
|-
|611
|''OsCDR1''
|[[Os01g0178600]]
|10.1094/MPMI-22-12-1635
|
|Finished
|-
|613
|''NH1''
|[[Os01g0194300]]
|10.1094/MPMI-18-0511
|
|Annotated
|-
|614
|''OsRAA1''
|[[Os01g0257300]]
|10.1104/pp.104.041996
|
|Annotated
|-
|615
|''CYP734A6''
|[[Os01g0388000]]
|10.1111/j.1365-313X.2011.04567.x
|
|Finished
|-
|616
|''OsWRKY11''
|[[Os01g0626400]]
|10.1007/s00299-008-0614-x
|
|Annotated
|-
|617-1
|''SLRL1''
|[[Os01g0646300]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|617-2
|''SLRL2''
|[[Os05g0574900]]
|10.1111/j.1365-313X.2005.02562.x
|
|Finished
|-
|618
|''RACK1A''
|[[Os01g0686800]]
|10.1105/tpc.107.054395
|
|Annotated
|-
|619
|''OsWRKY13''
|[[Os01g0750100]]
|10.1094/MPMI-20-5-0492
|
|Finished
|-
|620
|''OsKAT1''
|[[Os01g0756700]]
|10.1104/pp.107.101154
|
|Annotated
|-
|621
|''OsCIPK12''
|[[Os01g0759400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|623
|''GH3-2''
|[[Os01g0764800]]
|10.1104/pp.110.163774
|
|Annotated
|-
|624
|''OsGH3.1''
|[[Os01g0785400]]
|10.1094/MPMI-22-2-0201
|
|-
|626
|''AP37''
|[[Os01g0797600]]
|10.1104/pp.109.137554
|
|Finished
|-
|627
|''ZFP179''
|[[Os01g0839100]]
|10.1093/jxb/erq120
|
|Annotated
|-
|628
|''OsMYB3R-2''
|[[Os01g0841500]]
|10.1104/pp.108.133454
|
|-
|629
|''QHB''
|[[Os01g0854500]]
|10.1046/j.1365-313X.2003.01816.x
|
|-
|630
|''SAPK4''
|[[Os01g0869900]]
|10.1186/1471-2229-8-49
|
|Finished
|-
|631
|''SNAC2''
|[[Os01g0884300]]
|10.1007/s11103-008-9309-5
|
|-
|632
|''OsSBP''
|[[Os01g0916400]]
|10.1271/bbb.68.873
|
|-
|633
|''OsDREB1F''
|[[Os01g0968800]]
|10.1007/s11103-008-9340-6
|
|Annotated
|-
|635
|''BiP''
|[[Os02g0115900]]
|10.1093/pcp/pcp098
|
|-
|636
|''BiP3''
|[[Os02g0115900]]
|10.1371/journal.pone.0009262
|
|-
|637
|''OsRacB''
|[[Os02g0120800]]
|10.1016/j.plaphy.2005.12.001
|
|Finished
|-
|638
|''OsCYP2''
|[[Os02g0121300]]
|10.1186/1471-2229-11-34
|
|-
|639
|''OsMAPK33''
|[[Os02g0148100]]
|10.1007/s12038-011-9002-8
|
|Annotated
|-
|640
|''LRK1''
|[[Os02g0154200]]
|10.1111/j.1467-7652.2009.00428.x
|
|-
|641
|''OsWRKY71''
|[[Os02g0181300]]
|10.1016/j.jplph.2006.07.006
|
|-
|642
|''OsAGAP''
|[[Os02g0198300]]
|10.1111/j.1365-313X.2006.02898.x
|
|Annotated
|-
|643
|''CYP734A2''
|[[Os02g0204700]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|644
|''OsHPL2''
|[[Os02g0218700]]
|10.1111/j.1365-313X.2009.04031.x
|
|-
|645
|''RCN2''
|[[Os02g0531600]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|647
|''OsTPP1''
|[[Os02g0661100]]
|10.1007/s00425-008-0729-x
|
|Annotated
|-
|648
|''MAIF1''
|[[Os02g0671100]]
|10.1093/mp/ssq066
|
|Finished
|-
|649
|''SBPase''
|[[Os02g0698000]]
|10.1007/s00299-006-0299-y
|
|Finished
|-
|650
|''OsFAD2''
|[[Os02g0716500]]
|10.1007/s11032-011-9587-5
|
|Finished
|-
|651
|''OsHAP3E''
|[[Os02g0725700]]
|10.1016/j.plantsci.2011.04.009
|
|Finished
|-
|652
|''OsSKIPa''
|[[Os02g0759800]]
|10.1073/pnas.0901940106
|
|Finished
|-
|653
|''Orysa;KRP1''
|[[Os02g0762400]]
|10.1104/pp.106.087056
|
|Finished
|-
|654
|''mtHsp70''
|[[Os02g0774300]]
|10.1016/j.febslet.2010.11.051
|
|Finished
|-
|657
|''RWC3''
|[[Os02g0823100]]
|10.1093/pcp/pch058
|
|Finished
|-
|658
|''CDPK13''
|[[Os03g0128700]]
|10.1007/s00438-007-0220-6
|
|Annotated
|-
|659
|''OsCDPK13''
|[[Os03g0128700]]
|10.1007/s11103-004-1178-y
|
|Annotated
|-
|660
|''OsDof12''
|[[Os03g0169600]]
|10.1007/s00425-009-0893-7
|
|-
|661
|''OsTIFY11a''
|[[Os03g0180800]]
|10.1007/s11103-009-9524-8
|
|Annotated
|-
|662
|''GS1;2''
|[[Os03g0223400]]
|10.1007/s00299-008-0665-z
|
|Annotated
|-
|664
|''OsAOS2''
|[[Os03g0225900]]
|10.1094/MPMI-19-1127
|
|-
|665
|''RPN10''
|[[Os03g0243300]]
|10.5511/plantbiotechnology.21.233
|
|-
|666
|''sHSP17.7''
|[[Os03g0267200]]
|10.1007/s00299-007-0470-0
|
|Annotated
|-
|667
|''OsSDIR1''
|[[Os03g0272300]]
|10.1007/s11103-011-9775-z
|
|Annotated
|-
|668
|''OsAPXa''
|[[Os03g0285700]]
|10.1007/s00299-010-0985-7
|
|-
|669
|''OsCIPK03''
|[[Os03g0319400]]
|10.1104/pp.107.101295
|
|Annotated
|-
|670
|''OsEIL1''
|[[Os03g0324300]]
|10.1007/s11103-005-6184-1
|
|-
|671
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Annotated
|-
|673
|''OsIRO3''
|[[Os03g0379300]]
|10.1186/1471-2229-10-166
|
|-
|674
|''OSH1''
|[[Os03g0727000]]
|10.1105/tpc.5.9.1039
|
|-
|675
|''OsbHLH148''
|[[Os03g0741100]]
|10.1111/j.1365-313X.2010.04477.x
|
|Annotated
|-
|676
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|-
|677
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|-
|678
|''SNAC1''
|[[Os03g0815100]]
|10.1073/pnas.0604882103
|
|Annotated
|-
|679
|''SPIN1''
|[[Os03g0815700]]
|10.1105/tpc.108.058610
|
|-
|680
|''ZFP182''
|[[Os03g0820300]]
|10.1016/j.bbaexp.2007.02.006
|
|Annotated
|-
|681
|''OASA1D''
|[[Os03g0826500]]
|10.1093/jxb/erl068
|
|-
|684
|''OsSERK1''
|[[Os04g0457800]]
|10.1007/s00425-005-1534-4
|
|-
|685
|''OsOxi1''
|[[Os04g0488700]]
|10.1093/pcp/pcq132
|
|Annotated
|-
|686
|''OsRDCP1''
|[[Os04g0530500]]
|10.1016/j.plantsci.2011.02.008
|
|Annotated
|-
|687
|''OsDREB1E''
|[[Os04g0572400]]
|10.1007/s10529-008-9811-5
|
|-
|688
|''OsCDPK7''
|[[Os04g0584600]]
|10.1046/j.1365-313x.2000.00787.x
|
|Annotated
|-
|689
|''OsAP2-39''
|[[Os04g0610400]]
|10.1371/journal.pone.0025216
|
|-
|690
|''ostgap1''
|[[Os04g0637000]]
|10.1074/jbc.M109.036871
|
|-
|691
|''GS2''
|[[Os04g0659100]]
|10.1023/A:1006408712416
|
|-
|692
|''OsRR6''
|[[Os04g0673300]]
|10.1093/pcp/pcm022
|
|-
|694
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|-
|695
|''OsLti6b''
|[[Os05g0138300]]
|10.1007/s00299-006-0297-0
|
|Annotated
|-
|696
|''OsPYL/RCAR5''
|[[Os05g0213500]]
|10.1093/jxb/err338
|
|Annotated
|-
|697
|''OsIPT3''
|[[Os05g0311801]]
|10.1104/pp.106.085811
|
|-
|698
|''OsWRKY53''
|[[Os05g0343400]]
|10.1016/j.bbaexp.2007.04.006
|
|-
|699
|''OsDREB2B''
|[[Os05g0346200]]
|10.1007/s10529-008-9811-5
|
|-
|700
|''DEPG1''
|[[Os05g0365300]]
|10.1007/s11033-011-1122-6
|Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants
|Susceptibility to Biotic Stress
|-
|701
|''Gns1''
|[[Os05g0375400]]
|10.1023/A:1020714426540
|Characterization of transgenic rice plants over-expressing the stress-inducible beta-glucanase gene Gns1
|
|-
|702
|''OsISA2''
|[[Os05g0393700]]
|10.1104/pp.111.173435
|Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
|
|-
|703
|''OsTPS1''
|[[Os05g0518600]]
|10.1007/s00425-011-1458-0
|Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice
|Abiotic stress
|-
|704
|''OsLEA3-1''
|[[Os05g0542500]]
|10.1007/s00122-007-0538-9
|
|Annotated
|-
|705-1
|''OsIPT7''
|[[Os05g0551700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-2
|''OsIPT5''
|[[Os07g0211700]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-3
|''OsIPT4''
|[[Os03g0810100]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-4
|''OsIPT2''
|[[Os03g0356900]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-5
|''OsIPT8''
|[[Os01g0688300]]
|10.1104/pp.106.085811
|
|Finished
|-
|705-6
|''OsIPT10''
|[[Os06g0729800]]
|10.1104/pp.106.085811
|
|Finished
|-
|706
|''OsRAN2''
|[[Os05g0574500]]
|10.1111/j.1365-3040.2010.02225.x
|
|Annotated
|-
|707
|''OsHDT1''
|[[Os05g0597100]]
|10.1371/journal.pone.0021789
|
|Annotated
|-
|708
|''OsDREB1C''
|[[Os06g0127100]]
|10.1093/pcp/pci230
|
|Annotated
|-
|709
|''OsENOD93-1''
|[[Os06g0142350]]
|10.1111/j.1365-3040.2009.02032.x
|
|Annotated
|-
|710
|''OsPTF1''
|[[Os06g0193400]]
|10.1104/pp.105.063115
|
|Annotated
|-
|711
|''bu1''
|[[Os06g0226500]]
|10.1104/pp.109.140806
|
|Finished
|-
|712
|''HOX1a''
|[[Os06g0229300]]
|10.1111/j.1744-7909.2011.01075.x
|
|Finished
|-
|713
|''OsGLK1''
|[[Os06g0348800]]
|10.1093/pcp/pcp138
|
|Annotated
|-
|714-1
|''OsHDAC1''
|[[Os06g0583400]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-2
|''OsHDAC2''
|[[Os02g0215200]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|714-3
|''OsHDAC3''
|[[Os02g0214900]]
|10.1046/j.1365-313X.2003.01650.x
|
|Finished
|-
|715
|''CYP734A4''
|[[Os06g0600400]]
|10.1111/j.1365-313X.2011.04567.x
|
|-
|716
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1365-313X.2008.03734.x
|
|-
|717
|''OsiSAP8''
|[[Os06g0612800]]
|10.1007/s11103-007-9284-2
|
|Finished
|-
|718
|''OVP1''
|[[Os06g0644200]]
|10.1016/j.plaphy.2010.09.014
|
|Finished
|-
|719
|''OsWRKY28''
|[[Os06g0649000]]
|10.1007/s12284-010-9039-6
|
|-
|721
|''YK1''
|[[Os06g0651100]]
|10.1023/A:1019275218830
|
|Finished
|-
|722
|''OsPIN2''
|[[Os06g0660200]]
|10.1111/j.1467-7652.2011.00637.x
|
|-
|723-1
|''OSH1''
|[[Os03g0727000]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-2
|''OSH15''
|[[Os07g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-3
|''OSH43''
|[[Os03g0771500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-4
|''OSH6''
|[[Os01g0302500]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|723-5
|''OSH71''
|[[Os05g0129700]]
|10.1006/dbio.2000.9624
|
|Finished
|-
|724
|''YAB1''
|[[Os07g0160100]]
|10.1104/pp.107.096586
|
|-
|725
|''OsNek3''
|[[Os07g0176600]]
|10.1093/pcp/pcp026
|
|Finished
|-
|726
|''OsNRAMP1''
|[[Os07g0258400]]
|10.1093/jxb/err136
|
|Finished
|-
|727
|''OsPHR2''
|[[Os07g0438800]]
|10.1104/pp.107.111443
|
|-
|728
|''CrtintP1''
|[[Os07g0498800]]
|10.1007/s00438-007-0220-6
|
|Finished
|-
|729
|''GH3-8''
|[[Os07g0592600]]
|10.1105/tpc.107.055657
|
|-
|730
|''OsMADS18''
|[[Os07g0605200]]
|10.1104/pp.104.045039
|
|-
|731
|''OsNHX1''
|[[Os07g0666900]]
|10.1093/pcp/pch014
|
|Finished
|-
|732
|''OsMADS26''
|[[Os08g0112700]]
|10.1104/pp.107.114256
|
|-
|733
|''OsGAPC3''
|[[Os08g0126300]]
|10.1007/s11240-011-9950-6
|
|Finished
|-
|734
|''OsZIP4''
|[[Os08g0207500]]
|10.1093/jxb/erm147
|
|-
|735
|''OsDOG''
|[[Os08g0504700]]
|10.1016/j.jplph.2010.12.013
|
|Finished
|-
|736
|''OsISA1''
|[[Os08g0520900]]
|10.1104/pp.111.173435
|
|-
|737
|''OsCPK21''
|[[Os08g0540400]]
|10.1007/s11103-010-9717-1
|
|Finished
|-
|738
|''OsDREB1G''
|[[Os08g0545500]]
|10.1007/s10529-008-9811-5
|
|-
|739
|''rFCA''
|[[Os09g0123200]]
|10.1007/s10540-007-9047-y
|
|-
|740
|''OsCO3''
|[[Os09g0240200]]
|10.1007/s00425-008-0742-0
|
|Finished
|-
|741
|''OsWRKY76''
|[[Os09g0417600]]
|10.1007/s12284-010-9039-6
|
|Finished
|-
|742
|''OsWRKY62''
|[[Os09g0417800]]
|10.1093/mp/ssn024
|
|-
|743
|''OsbZIP72''
|[[Os09g0456200]]
|10.1007/s00425-008-0857-3
|
|Finished
|-
|744
|''OsEATB''
|[[Os09g0457900]]
|10.1104/pp.111.179945
|
|-
|745
|''Oshox4''
|[[Os09g0470500]]
|10.1007/s11103-007-9270-8
|
|Finished
|-
|746
|''OsTFX1''
|[[Os09g0474000]]
|10.1073/pnas.0701742104
|
|-
|747
|''RF2a''
|[[Os09g0516200]]
|10.1073/pnas.0810303105
|
|-
|748
|''OsDREB1B''
|[[Os09g0522000]]
|10.1093/pcp/pci230
|
|Finished
|-
|749
|''OsDREB1A''
|[[Os09g0522200]]
|10.1093/pcp/pci230
|
|Finished
|-
|750
|''OsPIP2;7''
|[[Os09g0541000]]
|10.1093/pcp/pcn166
|
|Finished
|-
|751
|''SAUR39''
|[[Os09g0545300]]
|10.1104/pp.109.143875
|
|Finished
|-
|753-1
|''OsSPX1''
|[[Os06g0603600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753-2
|''OsSPX2''
|[[Os02g0202200]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX3''
|[[Os10g0392600]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX4''
|[[Os03g0827500]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX5''
|[[Os03g0406100]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|753
|''OsSPX6''
|[[Os07g0614700]]
|10.1111/j.1744-7909.2009.00834.x
|
|Annotated
|-
|754
|''OsiICK6''
|[[Os10g0471700]]
|10.1093/aob/mcr057
|
|Finished
|-
|755
|''OsMADS56''
|[[Os10g0536100]]
|10.1111/j.1365-3040.2009.02008.x
|
|Finished
|-
|756
|''MYBS3''
|[[Os10g0561400]]
|10.1104/pp.110.153015
|
|Annotated
|-
|757
|''OsMSRA4.1''
|[[Os10g0563600]]
|10.1007/s00425-009-0934-2
|
|Annotated
|-
|758
|''Rir1b''
|[[Os10g0569400]]
|10.1023/A:1006423232753
|
|Finished
|-
|759
|''WOX3''
|[[Os11g0102100]]
|10.1104/pp.107.095737
|
|Annotated
|-
|760
|''OsCIPK15''
|[[Os11g0113700]]
|10.1104/pp.107.101295
|
|Finished
|-
|761
|''OsNAC10''
|[[Os11g0126900]]
|10.1104/pp.110.154773
|
|Finished
|-
|762
|''ONAC045''
|[[Os11g0127600]]
|10.1016/j.bbrc.2008.12.163
|
|Finished
|-
|763
|''RCN1''
|[[Os11g0152500]]
|10.1046/j.1365-313X.2002.01255.x
|
|Annotated
|-
|764
|''OsAsr1''
|[[Os11g0167800]]
|10.1007/s10059-009-0055-6
|
|Annotated
|-
|765-1
|''OsPR4a''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-2
|''OsPR4b''
|[[Os11g0592100]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-3
|''OsPR4c''
|[[Os11g0592000]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-4
|''OsPR4d''
|[[Os11g0591800]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|765-5
|''OsPR4e''
|[[Os11g0592200]]
|10.1016/j.jplph.2011.07.013
|
|Finished
|-
|766
|''OsMT1a''
|[[Os11g0704500]]
|10.1007/s11103-009-9466-1
|
|Finished
|-
|767
|''OsWAK1''
|[[Os11g0690066]]
|10.1007/s11103-008-9430-5
|
|Annotated
|-
|768
|''ZFP252''
|[[Os12g0583700]]
|10.1016/j.febslet.2008.02.052
|
|Finished
|-
|769
|''OsPID''
|[[Os12g0614600]]
|10.1093/pcp/pcm024
|
|Finished
|-
|771
|''OsTLP27''
|[[Os01g0102300]]
|10.1016/j.plantsci.2012.06.006
|
|Finished
|-
|772
|''OsHsp17.0''
|[[Os01g0136200]]
|10.1016/j.jplph.2011.12.014
|
|Finished
|-
|775
|''OsMKK6''
|[[Os01g0510100]]
|10.1016/j.jplph.2011.11.012
|
|Finished
|-
|776
|''OsRDR6''
|[[Os01g0527600]]
|10.1111/j.1365-313X.2012.05001.x
|
|Finished
|-
|777
|''RAD51C''
|[[Os01g0578000]]
|10.1093/jxb/ers190
|
|Finished
|-
|779
|''CFO1''
|[[Os01g0726400]]
|10.1104/pp.112.200980
|
|Finished
|-
|780
|''OsPAP10a''
|[[Os01g0776600]]
|10.1111/j.1744-7909.2012.01143.x
|
|Finished
|-
|782
|''OsCOI1''
|[[Os01g0853400]]
|10.1371/journal.pone.0036214
|
|Finished
|-
|783
|''OsMGT1''
|[[Os01g0869200]]
|10.1104/pp.112.199778
|
|Finished
|-
|784
|''PsbS''
|[[Os01g0869800]]
|10.1111/j.1365-313X.2012.04995.x
|
|Finished
|-
|785
|''OsHPL3''
|[[Os02g0110200]]
|10.1111/j.1365-313X.2012.05027.x
|
|Finished
|-
|786
|''MADS29''
|[[Os02g0170300]]
|10.1105/tpc.111.094854
|
|Finished
|-
|787
|''MTR1''
|[[Os02g0491300]]
|10.1016/j.devcel.2012.04.011
|
|Finished
|-
|788
|''cry1a''
|[[Os02g0573200]]
|10.1093/pcp/pcs097
|
|Finished
|-
|788-2
|''cry1b''
|[[Os04g0452100]]
|10.1093/pcp/pcs097
|
|Finished
|-
|789
|''OsABC1-2''
|[[Os02g0575500]]
|10.1016/j.gene.2012.02.017
|
|Finished
|-
|791
|''OsHk6''
|[[Os02g0738400]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1227
|''OsHk3''
|[[Os01g0923700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|1228
|''OsHk4''
|[[Os03g0717700]]
|10.1093/pcp/pcs079
|
|Finished
|-
|792
|''D50''
|[[Os02g0477700]]
|10.1111/j.1365-3040.2012.02534.x
|
|Finished
|-
|793
|''th1''
|[[Os02g0811000]]
|10.1007/s11103-011-9868-8
|Annotated
|
|-
|794
|''osdrm2''
|[[Os03g0110800]]
|10.1111/j.1365-313X.2012.04974.x
| Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
|
|-
|795
|''te''
|[[Os03g0123300]]
|10.1038/ncomms1716
|
|Finished
|-
|796
|''OsMYB2''
|[[Os03g0315400]]
|10.1093/jxb/err431
|The rice Os03g0315400 was reported as OsMYB2 in 2012 [1] by researchers from China.
|
|-
|797
|''OsCam1-1''
|[[Os03g0319300]]
|10.1007/s12374-011-0154-8
| The rice Os03g0319300 was reported as OsCam1-1 in 2012 [1] by researchers from Thailand.
|
|-
|798
|''OsLEA3-2''
|[[Os03g0322900]]
|10.1371/journal.pone.0045117
| OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance
|
|-
|800
|''ysa''
|[[Os03g0597200]]
|10.1104/pp.112.195081
|
|Disruption of a Rice Pentatricopeptide Repeat Protein Causes a Seedling-Specific Albino Phenotype and Its Utilization to Enhance Seed Purity in Hybrid Rice Production
|-
|801
|''OsSh1''
|[[Os03g0650000]]
|10.1038/ng.2281
| Parallel domestication of the Shattering1 genes in cereals
|
|-
|802
|''OsSWAP70A''
|[[Os03g0666200]]
|10.1111/j.1365-313X.2011.04874.x
|Annotated
|
|-
|803
|''OsDDM1b''
|[[Os03g0722400]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|804
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)
|
|-
|806
|''OsPIL1''
|[[Os03g0782500]]
|10.1073/pnas.1207324109
|Annotated
|
|-
|807
|''gh1''
|[[Os03g0819600]]
|10.1007/s00425-012-1598-x
| A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype
|
|-
|808
|''OsPT1''
|[[Os03g0150600]]
|10.1104/pp.112.196345
|A Constitutive Expressed Phosphate Transporter, OsPht1;1, Modulates Phosphate Uptake and Translocation in Phosphate-Replete Rice
|
|-
|810
|''OsVIT1''
|[[Os04g0463400]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|811
|''YSL16''
|[[Os04g0542800]]
|10.1105/tpc.112.103820
| Annotated
|
|-
|812
|''cZOGT1''
|[[Os04g0556500]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|-
|813
|''cZOGT2''
|[[Os04g0556600]]
|10.1104/pp.112.196733
|Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|1026
|''cZOGT3''
|[[Os04g0565400]]
|10.1104/pp.112.196733
| Cytokinin Activity of cis-Zeatin and Phenotypic Alterations Induced by Overexpression of Putative cis-Zeatin-O-glucosyltransferase in Rice
|
|-
|814
|''xiao''
|[[Os04g0576900]]
|10.1111/j.1365-313X.2011.04877.x
|XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassino steroids and cell cycling in rice
|
|-
|815
|''MPR25''
|[[Os04g0602600]]
|10.1111/j.1365-313X.2012.05091.x
| Annotated
|
|-
|816
|''shat1''
|[[Os04g0649100]]
|10.1105/tpc.111.094383
| Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1
|
|-
|817
|''SLAC1''
|[[Os04g0674700]]
|10.1093/jxb/ers216
| Increased leaf photosynthesis caused by elevated stomatal conductance in a rice mutant deficient in SLAC1, a guard cell anion channel protein
|
|-
|819
|''OsMYB2P-1 1''
|[[Os05g0140100]]
|10.1104/pp.112.194217
| OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
|
|-
|820
|''OsSYP71''
|[[Os05g0553700]]
|10.1016/j.gene.2012.05.011
| Overexpression of the Qc-SNARE gene OsSYP71 enhances tolerance to oxidative stress and resistance to rice blast in rice
|
|-
|821
|''HDT701''
|[[Os05g0597100]]
|10.1105/tpc.112.101972
| HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice
|
|-
|822
|''OsELF3-1''
|[[Os06g0142600]]
|10.1371/journal.pone.0043705
| Annotated
|
|-
|823
|''Hd17''
|[[Os06g0142600]]
|10.1093/pcp/pcs028
| Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering
|-
|825
|''LYP6''
|[[Os06g0208800]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|826
|''OsbZIP46''
|[[Os06g0211200]]
|10.1104/pp.111.190389
| Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice
|
|-
|830
|''RPL1''
|[[Os06g0245600]]
|10.1093/mp/ssr091
| RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice
|
|-
|831
|''OsHSBP2''
|[[Os06g0274000]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|1027
|''OsHSBP1''
|[[Os09g0375100]]
|10.1093/jxb/ers245
| Functional analysis of OsHSBP1 and OsHSBP2 revealed
|-
|832
|''OsMIOX''
|[[Os06g0561000]]
|10.1016/j.plantsci.2012.08.003
| Annotated
|
|-
|833
|''SE5''
|[[Os06g0603000]]
|10.1007/s11103-012-9945-7
| Annotated
|
|-
|834
|''OsCOM1''
|[[Os06g0613400]]
|10.1111/j.1365-313X.2012.05025.x
| The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis
|
|-
|835
|''OsbZIP52/RISBZ5''
|[[Os06g0662200]]
|10.1007/s00425-011-1564-z
| Annotated
|
|-
|836
|''SRL1''
|[[Os07g0102300]]
|10.1104/pp.112.199968
| Annotated
|
|-
|837
|''MADS15''
|[[Os07g0108900]]
|10.1105/tpc.112.097105
| Annotated
|
|-
|840
|''OsSWAP70B''
|[[Os07g0138100]]
|10.1111/j.1365-313X.2011.04874.x
| SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice
|
|-
|841
|''spl5''
|[[Os07g0203700]]
|10.1007/s11032-011-9677-4
| SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
|
|-
|842
|''Nramp5''
|[[Os07g0257200]]
|10.1105/tpc.112.096925
| Annotated
|
|-
|843
|''OsCHR4''
|[[Os07g0497000]]
|10.1007/s00425-012-1667-1
| Molecular cloning and characterization of OsCHR4, a rice chromatin-remodeling factor required for early chloroplast development in adaxial mesophyll
|
|-
|844
|''chr729''
|[[Os07g0497100]]
|10.1073/pnas.1203148109
| CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
|
|-
|845
|''OSRIP18''
|[[Os07g0556800]]
|10.1007/s11248-011-9568-9
| Annotated
|
|-
|846
|''ObgC''
|[[Os07g0669200]]
|10.1111/j.1365-313X.2012.04976.x
| Functional characterization of ObgC in ribosome biogenesis during chloroplast development
|
|-
|847
|''cslf6''
|[[Os08g0160500]]
|10.1104/pp.112.195495
| Loss of Cellulose Synthase-Like F6 Function Affects Mixed-Linkage Glucan Deposition, Cell Wall Mechanical Properties, and Defense Responses in Vegetative Tissues of Rice
|
|-
|848
|''OsLIS-L1''
|[[Os08g0162100]]
|10.1007/s00425-011-1532-7
| Annotated
|
|-
|851
|''WRKY30''
|[[Os08g0499300]]
|10.1007/s00425-012-1668-0
| Annotated
|
|-
|852
|''Orysa;CDKB2;1''
|[[Os08g0512600]]
|10.1111/j.1365-313X.2011.04847.x
| CDKB2 is involved in mitosis and DNA damage response in rice
|
|-
|853
|''qGW8''
|[[Os08g0531600]]
|10.1038/ng.2327
| Annotated
|
|-
|854
|''SDG724''
|[[Os09g0307800]]
|10.1105/tpc.112.101436
| Annotated
|
|-
|856
|''OsVIT2''
|[[Os09g0396900]]
|10.1111/j.1365-313X.2012.05088.x
| Annotated
|
|-
|857
|''OsDDM1a''
|[[Os09g0442700]]
|10.1007/s00438-012-0717-5
| Annotated
|
|-
|858
|''LYP4''
|[[Os09g0452200]]
|10.1105/tpc.112.102475
| Annotated
|
|-
|859
|''BC15/OsCTL1''
|[[Os09g0494200]]
|10.1104/pp.112.195529
|Annotated
|
|-
|860
|''LGD1''
|[[Os09g0502100]]
|10.1111/j.1365-313X.2012.04989.x
|Annotated
|
|-
|861
|''BSR1''
|[[Os09g0533600]]
|10.1111/j.1467-7652.2010.00568.x
|Screening for resistance against Pseudomonas syringae in rice-FOX Arabidopsis lines identified a putative receptor-like cytoplasmic kinase gene that confers resistance to major bacterial and fungal pathogens in Arabidopsis and rice.
|Resistance
|-
|862
|''OsLDC-like 1''
|[[Os09g0547500]]
|10.1007/s10059-012-0067-5
|Increased Polyamine Biosynthesis Enhances Stress Tolerance by Preventing the Accumulation of Reactive Oxygen Species: T-DNA Mutational Analysis of Oryza sativa Lysine Decarboxylase-like Protein 1
|
|-
|863
|''OsDEES1''
|[[Os09g0561600]]
|10.1104/pp.112.203943
|Annotated
|
|-
|864
|''OsFbx352''
|[[Os10g0127900]]
|10.1093/jxb/ers206
|Annotated
|
|-
|865
|''rl14''
|[[Os10g0558900]]
|10.1111/j.1467-7652.2012.00679.x
|Annotated
|
|-
|866
|''ospk1''
|[[Os11g0148500]]
|10.1007/s11105-011-0386-2
| Downregulation of OsPK1 Contributes to Oxidative Stress and the Variations in ABA/GA Balance in Rice
|
|-
|867
|''MIL2''
|[[Os12g0152500]]
|10.1111/j.1469-8137.2012.04270.x
| MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther
|
|-
|868
|''PSTOL1''
|[[BAK26566]]
|10.1038/nature11346
|
|-
|869
|''p/tms12-1''
|[[smRNA615912]]
|10.1038/cr.2012.28
|
|-
|870
|''OsHsp23.7''
|[[Os12g0569700]]
|10.1016/j.jplph.2011.12.014
| Annotated
|
|-
|871
|''Amy1A''
|[[Os02g0765600]]
|10.1111/j.1467-7652.2012.00741.x
| Annotated
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|872
|''Amy2A''
|[[Os06g0713800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|873
|''Amy3A''
|[[Os09g0457400]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|874
|''Amy3B''
|[[Os09g0457600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1236
|''Amy3C''
|[[Os09g0457800]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1237
|''Amy3D''
|[[Os08g0473900]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|1238
|''Amy3E''
|[[Os08g0473600]]
|10.1111/j.1467-7652.2012.00741.x
|Suppression of a-amylase genes improves quality of rice grain ripened under high temperature
|
|-
|875
|''ylc1''
|[[Os09g0380200]]
|10.1007/s00425-012-1756-1
| Young Leaf Chlorosis 1, a chloroplast-localized gene required for chlorophyll and lu
|
|-
|878
|''OsIAGLU''
|[[Os03g0693600]]
|10.1007/s12374-012-0238-0
| Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA
|
|-
|879
|''OsOAT''
|[[Os03g0643300]]
|10.1016/j.plantsci.2012.09.002
| Annotated
|
|-
|1230
|''OsAPS1''
|[[Os09g0298200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1231
|''OsAPS2''
|[[Os08g0345800]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1232
|''OsAGPL1''
|[[Os03g0735000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1234
|''OsAPL3''
|[[Os05g0580000]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|1235
|''OsAPL4''
|[[Os07g0243200]]
|10.1071/FP12186
| Gene Expression of ADP-glucose Pyrophosphorylase and Starch Contents in Rice Cultured Cells are Cooperatively Regulated by Sucrose and ABA
|
|-
|881
|''OsGH3-2''
|[[Os01g0764800]]
|10.1093/jxb/ers300
| Annotated
|
|-
|882
|''OsDMI3''
|[[Os05g0489900]]
|10.1093/mp/sss068
|
|Annotated
|-
|883
|''Psi?LDMAR''
|[[Os12g0545900]]
|10.1093/mp/sss095
| Annotated
|
|-
|884
|''OsJAZ8''
|[[Os09g0439200]]
|10.1093/pcp/pcs145
| Annotated
|
|-
|885
|''Osj10gBTF3''
|[[Os10g0483000]]
|10.1093/pcp/pcs146
| Inhibition of a Basal Transcription Factor 3-Like Gene Osj10gBTF3 in Rice Results in Significant Plant Miniaturization and Typical Pollen Abortion
|
|-
|886
|''LPA1''
|[[Os03g0237250]]
|10.1104/pp.112.208496
| Annotated
|
|-
|887
|''PT11''
|[[Os01g0657100]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|888
|''PT13''
|[[ Os04g0186800]]
|10.1105/tpc.112.104901
| Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family
|
|-
|889
|''OsMYB55''
|[[Os05g0553400]]
|10.1371/journal.pone.0052030
| Annotated
|
|-
|890
|''DDF1''
|[[Os06g0138700]]
|10.1111/j.1365-313X.2012.05126.x
|Dwarf and deformed flower 1, encoding an F‐box protein, is critical for vegetative and floral development in rice (Oryza sativa L.)
|
|-
|891
|''OsPIN3t''
|[[Os01g0643300]]
|10.1111/j.1365-313X.2012.05121.x
| Annotated
|
|-
|892
|''OsbHLH133''
|[[Os12g0508500]]
|10.1111/j.1365-3040.2012.02569.x
| Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa
|
|-
|893
|''PGR5''
|[[Os08g0566600]]
|10.1093/pcp/pcs153
| PGR5-Dependent Cyclic Electron Transport Around PSI Contributes to the Redox Homeostasis in Chloroplasts Rather Than CO2 Fixation and Biomass Production in Rice
|
|-
|894
|''OsNRT2.3a''
|[[Os01g0704100]]
|10.1104/pp.112.204461
| Annotated
|
|-
|895
|''bls1''
|[[Os02g0811000]]
|10.1007/s11105-012-0480-0
| BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Ri
|
|-
|896
|''UIP1''
|[[Os02g0818000]]
|10.1007/s11816-012-0239-y
| Transgenic overexpression of UIP1, an interactor of the 3 0 untranslated region of the Rubisco small subunit mRNA, increases rice tolerance to drought
|
|-
|897
|''OrbHLH001''
|[[Os01g0928000]]
|10.1016/j.jplph.2012.08.019
| Annotated
|
|-
|898
|''CSA''
|[[Os01g0274800]]
|10.1073/pnas.1213041110
|Annotated
|
|-
|899
|''qGL3''
|[[Os03g0646900]]
|10.1073/pnas.1219776110
|Annotated
|
|-
|900
|''OsPPKL2''
|[[Os05g0144400]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|901
|''OsPPKL3''
|[[Os12g0617900]]
|10.1073/pnas.1219776110
| Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice
|
|-
|902
|''OsSRO1c''
|[[Os03g0230300]]
|10.1093/jxb/ers349
|
* Annotated
|-
|903
|''OsGT1''
|[[Os01g0262600]]
|10.1104/pp.112.210948
|
* Annotated
|-
|904
|''FIE1''
|[[Os08g0137250]]
|10.1105/tpc.112.102269
|
* Annotated
|-
|905
|''APIP6''
|[[Os05g0154600]]
|10.1105/tpc.112.105429
| The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen Associated Molecular Pattern–Triggered Immunity in Rice
|
|-
|906
|''BRK1''
|[[Os07g0508500]]
|10.1105/tpc.112.105874
| BRK1, a Bub1-Related Kinase, Is Essential for Generating Proper Tension between Homologous Kinetochores at Metaphase I of Rice Meiosis
|
|-
|907
|''OsARG''
|[[Os04g0106300]]
|10.1111/j.1365-313x.2012.05122.x
|
* Annotated
|-
|908
|''DEC''
|[[Os12g0465700]]
|10.1111/j.1365-313x.2012.05123.x
| Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
|
|-
|909
|''OsIDD10''
|[[Os04g0566400]]
|10.1111/nph.12075
| Regulatory role of indeterminate domain 10 (IDD10) in ammonium-dependent gene expression in rice roots
|
|-
|910
|''OsARF16''
|[[Os06g0196700]]
|10.1111/pce.12001
|
* Annotated
|-
|911
|''OsMADS29''
|[[Os02g0170300]]
|10.1371/journal.pone.0051435
|
|Annotated
|-
|912
|''OsPDCD5''
|[[Os05g0547850]]
|10.1007/s11032-012-9793-9
|
|Annotated
|-
|913
|''OsCDPK1''
|[[Os03g0128700]]
|10.1007/s11103-012-0006-z
|
|Annotated
|-
|914
|''PDA1''
|[[Os06g0607700]]
|10.1007/s12374-013-0902-z
|
|Annotated
|-
|915
|''JMJ703''
|[[Os05g0196500]]
|10.1073/pnas.1217020110
|
|Annotated
|-
|916
|''OsVIL2''
|[[Os02g0152500]]
|10.1111/tpj.12057
| OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice
|
|-
|917
|''AIP1''
|[[Os01g0125800]]
|10.1111/tpj.12065
| Oryza sativa actin-interacting protein 1 is required for rice growth by promoting actin turnover
|
|-
|918
|''Xb25''
|[[Os09g0513000]]
|10.1111/tpj.12076
| The XA21 binding protein XB25 is required for maintaining XA21-mediated disease resistance
|
|-
|919
|''DTH2''
|[[Os02g0724000]]
|10.1073/pnas.1213962110
|
|Annotated
|-
|920
|''reg1''
|[[Os03g0786400]]
|10.1073/pnas.1300359110
|
|Annotated
|-
|924
|''fgl''
|[[Os10g0496900]]
|10.1111/tpj.12110
|
|Annotated
|-
|925
|''Ehd4''
|[[Os03g0112700]]
|10.1371/journal.pgen.1003281
|
|Annotated
|-
|926
|''GnTI''
|[[Os02g0833000]]
|10.1111/tpj.12087
| N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa
|
|-
|927
|''OsFH1''
|[[Os01g0897700]]
|10.1007-s00425-013-1838-8
|
|Annotated
|-
|928
|''moc2''
|[[Os01g0866400]]
|10.5511/plantbiotechnology.12.1210a
| Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
|
|-
|929
|''OsHsfA7''
|[[Os01g0571300]]
|10.5483/BMBRep.2013.46.1.090
|
|Annotated
|-
|930
|''OsPIANK1''
|[[Os11g0182500]]
|10.1371/journal.pone.0059699
| Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack
|
|-
|931
|''OsFIE2''
|[[Os08g0137100]]
|10.1371/journal.pgen.1003322
|
|Annotated
|-
|933
|''OsORC3''
|[[Os10g0402200]]
|10.1111/tpj.12126
| OsORC3 is required for lateral root development in rice
|
|-
|934
|''OsAOC''
|[[Os03g0438100]]
|10.1111/tpj.12115
| Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae
|
|-
|935
|''OsSNDP1''
|[[Os10g0122600]]
|10.1007-s11103-013-0033-4
| OsSNDP1, a Sec14-nodulin domain-containing protein, plays a critical role in root hair elongation in rice
|
|-
|936
|''OsRP1L1''
|[[Os05g0365300]]
|10.1007-s11105-012-0537-0
|
|Annotated
|-
|937
|''OsVPS22''
|[[Os09g0529700]]
|10.1007/s11033-012-2422-1
| Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality
|
|-
|938
|''OsTZF1''
|[[Os05g0195200]]
|10.1104/pp.112.205385
|
|Annotated
|-
|939
|''OsAt10''
|[[Os06g0594700]]
|10.1104/pp.112.208694
| Overexpression of a BAHD Acyltransferase, OsAt10, Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification
|
|-
|940
|''Cga1''
|[[Os02g0220400]]
|10.1104/pp.113.217265
|
|Annotated
|-
|941
|''nal2''
|[[Os11g0102100]]
|10.1111/nph.12231
| A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development
|
|-
|942
|''nal3''
|[[Os12g0101600]]
|10.1111/nph.12231
|
|Annotated
|-
|943
|''OsPTR9''
|[[Os06g0706400]]
|10.1111/pbi.12031
|
|Annotated
|-
|944
|''OsDHAR1''
|[[Os05g0116100]]
|10.1007/s00425-013-1862-8
| Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice
|
|-
|945
|''ASR1''
|[[Os11g0167800]]
|10.1007/s10059-013-0036-7
|
|Annotated
|-
|946
|''ASR3''
|[[Os02g0543000]]
|10.1007/s10059-013-0036-7
| Abiotic Stress Responsive Rice ASR1 and ASR3 Exhibit Different Tissue-Dependent Sugar and Hormone-Sensitivities
|
|-
|947
|''OsDIL1''
|[[Os10g0148000]]
|10.1007/s11103-013-0057-9
|
|Annotated
|-
|948
|''SLL1''
|[[Os04g0379900]]
|10.1016/j.plantsci.2013.01.003
| SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involve
|
|-
|949
|''Oscyp71Z2''
|[[Os07g0217600]]
|10.1016/j.plantsci.2013.02.005
| Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice
|
|-
|950
|''OsGPX3''
|[[Os02g0664000]]
|10.1016/j.plantsci.2013.03.017
|The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 homeostasis and root and shoot development in rice
|
|-
|951
|''OsGS1;2''
|[[Os03g0223400]]
|10.1093/pcp/pct046
|
|Annotated
|-
|952
|''MSF1''
|[[Os05g0497200]]
|10.1104/pp.113.216044
|Annotated
|
|-
|953
|''CAP1''
|[[Os02g0141300]]
|10.1104/pp.113.216523
|
|Annotated
|-
|954
|''glup6''
|[[Os03g0262900]]
|10.1104/pp.113.217869
|Annotated
|
|-
|955
|''OsGDCH''
|[[Os10g0516100]]
|10.1111/pce.12078
| Knockdown of GDCH gene reveals reactive oxygen species-induced leaf senescence in rice
|
|-
|956
|''RGA4''
|[[Os11g0225100]]
|10.1105/tpc.112.107201
|
|Annotated
|-
|957
|''RGA5''
|[[Os11g0225300]]
|10.1105/tpc.112.10720
| The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
|
|-
|958
|''LOX3''
|[[Os03g0700400]]
|10.1007/s12374-013-0085-7
| Molecular Genetic Characterization of Rice Seed Lipoxygenase 3 and Assessment of Its Effects on Seed Longevity
|
|-
|959
|''Sar1a''
|[[Os01g0338000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|-
|960
|''Sar1b''
|[[Os12g0560300 ]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1c''
|[[Os01g0254000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|961
|''Sar1d''
|[[Os06g0225000]]
|10.1093/jxb/ert128
| Small GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
|
|-
|962
|''vyl''
|[[Os03g0411500]]
|10.1104/pp.113.217604
|
|Annotated
|-
|963
|''SERF1''
|[[Os05g0420300]]
|10.1105/tpc.113.113068
| SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species–Dependent Signaling during the Initial Response to Salt Stress in Rice
|
|-
|964
|''dep''
|[[Os05g0118700]]
|10.1186/1939-8433-5-28
|A WUSCHEL-related homeobox 3B gene, depilous (dep), confers glabrousness of rice leaves and glumes
|
|-
|965
|''LC1''
|[[Os01g0785400]]
|10.1093/mp/sss064
|
|Annotated
|-
|966
|''TUD1''
|[[Os03g0232600]]
|10.1371/journal.pgen.1003391
|Annotated
|
|-
|967
|''GL3.1''
|[[Os03g0646900]]
|10.1038/cr.2012.151
|
|Annotated
|-
|971
|''Oshox22''
|[[Os04g0541700]]
|10.1007/s11103-012-9967-1
|Annotated
|
|-
|972
|''OsLG1''
|[[Os04g0656500]]
|10.1038/ng.2567
| OsLG1 regulates a closed panicle trait in domesticated rice
|
|-
|973
|''OsMSH5''
|[[Os05g0498300]]
|10.1093/mp/sss145
|Annotated
|
|-
|974
|''ABCG15''
|[[Os06g0607700]]
|10.1093/pcp/pcs162
|Annotated
|
|-
|975
|''TGW6''
|[[Os06g0623700]]
|10.1038/ng.2612
|Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield
|
|-
|976
|''OsFD2''
|[[Os06g0720900]]
|10.1093/pcp/pct005
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|Annotated
|-
|127
|''OsFD1''
|[[Os09g0540800]]
|10.1038/nature10272
| Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes
|-
|977
|''OsDGL1''
|[[Os07g0209000]]
|10.1093/pcp/pcs159
| OsDGL1, a Homolog of an Oligosaccharyltransferase Complex Subunit, is Involved in N-Glycosylation and Root Development in Rice
|
|-
|978
|''Rurm1''
|[[Os07g0466300]]
|10.1093/mp/sst042
|Loss-of-Function of a Ubiquitin-Related Modifier Promotes the Mobilization of the Active MITE mPing
|
|-
|979
|''RSS3''
|[[Os11g0446000]]
|10.1105/tpc.113.112052
|
|Annotated
|-
|980
|''OsRecQl4''
|[[Os04g0433800]]
|10.1093/pcp/pcs155
| DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants
|
|-
|981
|''OsExo1''
|[[Os01g0777300]]
|10.1093/pcp/pcs155
| Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase k and RPA subunit proteins, is involved in cell proliferation
|
|-
|982
|''OsIRX10''
|[[Os01g0926700]]
|10.1093/mp/sss135
| Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification
|
|-
|983
|''OsCpn60α1''
|[[Os12g0277500]]
|10.1007/s10059-013-2337-2
| OsCpn60α1, Encoding the Plastid Chaperonin 60α Subunit, Is Essential for Folding of rbcL
|
|-
|985
|''Dro1''
|[[Os09g0439800]]
|10.1038/ng.2725
|Annotated
|
|-
|986
|''OsSAG12-1''
|[[Os01g0907600]]
|10.1007/s12038-013-9334-7
| Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants
|
|-
|987
|''BGL11(t)''
|[[Os11g0592900]]
|10.1007/s13258-013-0094-4
| Identification and characterization of BGL11(t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)
|
|-
|990
|''OsDET1''
|[[Os01g0104600]]
|10.1016/j.plantsci.2013.06.003
| Mutation of OsDET1 increases chlorophyll content in rice
|
|-
|991
|''OsVHA-A''
|[[Os06g0662000]]
|10.1371/journal.pone.0069046
|Annotated
|
|-
|992
|''TIFY11b''
|[[Os03g0181100]]
|10.1271/bbb.120545
| Overexpression of a Rice TIFY Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
|
|-
|994
|''GE''
|[[Os07g0603700]]
|10.1111/tpj.12223
| GIANT EMBRYO encodes CYP78A13, required for proper size balance between embryo and endosperm in rice
|
|-
|999
|''OsAP65''
|[[Os07g0592200]]
|10.1093/jxb/ert173
| OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth
|
|-
|1000
|''OsbZIP58''
|[[Os07g0182000]]
|10.1093/jxb/ert187
| OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm
|
|-
|1001
|''YGL138(t)''
|[[Os11g0153600]]
|10.1186/1939-8433-6-7
| YGL138(t), encoding a putative signal recognition
particle 54 kDa protein, is involved in chloroplast
development of rice
|Development
|-
|1003
|''OsGA20ox3''
|[[Os07g0169700]]
|10.1094/MPMI-05-12-0138-R
| Gibberellin 20-Oxidase Gene OsGA20ox3 Regulates
Plant Stature and Disease Development in Rice
|Stress
|-
|1004
|''Hd16''
|[[Os03g0793500]]
|10.1111/tpj.12268
|
|Annotated
|-
|1005
|''Bh4''
|[[Os04g0460200]]
|10.1104/pp.110.168500
| Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
|Development
|-
|1006
|''OsSUV3''
|[[Os03g0746500]]
|10.1111/tpj.12277
|
|Annotated
|-
|1007
|''OsMPS''
|[[Os02g0618400]]
|10.1111/tpj.12286
|
|Annotated
|-
|1008
|''OsCDT3''
|[[Os01g0178300]]
|10.1111/tpj.12296
|A plasma membrane-localized small peptide is involved in rice aluminum tolerance
|Stress
|-
|1009
|''CRC1''
|[[Os04g0479000]]
|10.1105/tpc.113.113175
| CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice
|Development
|-
|1010
|''ASL1''
|[[Os01g0678600]]
|10.1534/g3.113.007856
|Disruption of the Rice Plastid Ribosomal Protein S20 Leads to Chloroplast Developmental Defects and Seedling Lethality
|Development
|-
|1011
|''OsNAP''
|[[Os03g0327800]]
|10.1186/1471-2229-13-132
|
|Annotated
|-
|1012
|''GS6''
|[[Os06g0127800]]
|10.1111/jipb.12062
|
|Annotated
|-
|1013
|''OsHOS1''
|[[Os03g0737200]]
|10.1007/s11103-013-0092-6
| Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response
|Stress
|-
|1014
|''SGRL''
|[[Os04g0692600]]
|10.1016/j.jplph.2013.05.016
|
|The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice
|-
|1017
|''An-1''
|[[Os04g0350700]]
|10.1105/tpc.113.113589
|
|Annotated
|-
|1018
|''OslecRK''
|[[Os04g0201900]]
|10.1111/tpj.12328
|
|A rice lectin receptor-like kinase that is involved in innateimmune responses also contributes to seed germination
|-
|1020
|''OsVOZ2''
|[[Os05g0515700]]
|10.1371/journal.pone.0073346
|Xanthomonas oryzae pv. oryzae Type III Effector XopN Targets OsVOZ2 and a Putative Thiamine Synthase as a Virulence Factor in Rice
|Stress
|-
|1021
|''OsHsfB2b''
|[[Os08g0546800]]
|10.1007/s00299-013-1492-4
|
|Annotated
|-
|1022
|''OsGRX8''
|[[Os02g0512400]]
|10.1007/s00425-013-1940-y
|Modified expression of an auxin‐responsive rice CC‐type glutaredoxin gene affects multiple abiotic stress responses
| stress
|-
|1023
|''DAO''
|[[Os04g0475600]]
|10.1016/j.devcel.2013.09.005
|
|Annotated
|-
|1024
|''OsHMA5''
|[[Os04g0556000]]
|10.1104/pp.113.226225
|A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
|Stress
|-
|1025
|''Osoxo4''
|[[Os03g0693700]]
|10.1111/mpp.12055
|
|Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice
|-
|1026
|''OsSTN8''
|[[Os05g0480000]]
|10.1111/tpj.12331
|
|Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice
|-
|1027
|''OsEXPA8''
|[[Os01g0248900]]
|10.1371/journal.pone.0075997
|
|Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension
|-
|1028
|''OsPRR37''
|[[Os07g0695100]]
|10.1093/mp/sst088
|
|Natural Variation in OsPRR37 Regulates Heading Date and Contributes to Rice Cultivation at a Wide Range of Latitudes
|-
|1029
|''OsMADS57''
|[[Os02g0731200]]
|10.1038/ncomms2542
|
|Annotated
|-
|1030
|''DWA1''
|[[Os04g0473900]]
|10.1073/pnas.1316412110
|
|Annotated
|-
|1031
|''gpa2''
|[[Os03g0262900]]
|10.1093/mp/sst081
|
|Annotated
|-
|1032
|''MHZ7/OsEIN2''
|[[Os07g0155600]]
|10.1093/mp/sst087
|
|Annotated
|-
|1033
|''YGL2''
|[[Os06g0603000]]
|10.1007/s00299-013-1498-y
|
|Annotated
|-
|1034
|''OsMTP8.1''
|[[Os03g0226400]]
|10.1093/jxb/ert243
|Mn tolerance in rice is mediated by MTP8.1, a member of the cation diffusion facilitator family
|
|-
|1035
|''this1''
|[[Os01g0751600]]
|10.1093/jxb/ert256
| THIS1 is a putative lipase that regulates tillering, plant height, and spikelet fertility in rice
|
|-
|1036
|''OsABCG15''
|[[Os06g0607700]]
|10.1111/jipb.12053
|
|The ATP‐binding Cassette Transporter OsABCG15 is Required for Anther Development and Pollen Fertility in Rice
|-
|1037
|''OsRRMh''
|[[Os09g0516300]]
|10.1111/jipb.12056
| OsRRMh, a Spen-like gene, plays an important role during the vegetative to reproductive transition in rice.
|
|-
|1038
|''OsCTR2''
|[[Os02g0527600]]
|10.1093/jxb/ert272
| Rice CONSTITUTIVE TRIPLE-RESPONSE2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
|
|-
|1039
|''OsbZIP71''
|[[Os09g0306400]]
|10.1007/s11103-013-0115-3
|
|Annotated
|-
|1040
|''OsHox33''
|[[Os12g0612700]]
|10.1007/s11427-013-4565-2
|Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice
|
|-
|1041
|''OsGAPDHB''
|[[Os03g0129300]]
|10.1016/j.plantsci.2013.09.010
|A proteomic study of rice cultivar TNG67 and its high aroma mutant SA0420.
|
|-
|1042
|''OsAPX7''
|[[Os04g0434800]]
|10.1016/j.plantsci.2013.10.001
| The knockdown of chloroplastic ascorbate peroxidases reveals its regulatory role in the photosynthesis and protection under photo-oxidative stress in rice
|
|-
|1043
|''OsAPX8''
|[[Os02g0553200]]
|10.1016/j.plantsci.2013.10.001
|
|Annotated
|-
|1044
|''OsRNS4''
|[[Os09g0537700]]
|10.1016/j.plantsci.2013.10.003
|
|Annotated
|-
|1045
|''D53''
|[[Os11g0104300]]
|"10.1038/nature12870, 10.1038/nature12878"
|
|Annotated
|-
|1046
|''OsHRZ1''
|[[Os01g0689451]]
|10.1038/ncomms3792
| Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1047
|''OsHRZ2''
|[[Os05g0551000]]
|10.1038/ncomms3792
|Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation
|
|-
|1048
|''PTB1''
|[[Os05g0145000]]
|10.1038/ncomms3793
| Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
|
|-
|1050
|''OsBOR4''
|[[Os05g0176800]]
|10.1093/pcp/pct136
|
|Annotated
|-
|1051
|''LYL1''
|[[Os02g0744900]]
|10.1371/journal.pone.0075299
| Mutation of the Light-Induced Yellow Leaf 1 Gene, Which Encodes a Geranylgeranyl Reductase, Affects Chlorophyll Biosynthesis and Light Sensitivity in Rice
|
|-
|1052
|''OsEBS''
|[[Os05g0591400]]
|10.1111/pbi.12097
|Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice
|
|-
|1053
|''SOR1''
|[[Os04g0101800]]
|10.1186/1939-8433-6-30
| Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
|
|-
|1054
|''OsCPK10''
|[[Os03g0788500]]
|10.1016/j.plaphy.2013.10.004
|
|Annotated
|-
|1055
|''JMJ705''
|[[Os01g0907400]]
|10.1105/tpc.113.118802
| Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice
|Stress
|-
|1056
|''OsCCaMK''
|[[Os05g0489900]]
|10.1128/AEM.03646-13.
| A rice gene for microbial symbiosis, OsCCaMK, reduces CH 4 flux in a paddy field with low nitrogen input
|Stress
|-
|1061
|''LH8''
|[[Os08g0174500]]
|10.1038/srep04263
|
|Annotated
|-
|1063
|''OsTrx1''
|[[Os09g0134500]]
|10.1104/pp.113.228049
| Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3
|
|-
|1071
|''RIXI''
|[[Os11g0701800]]
|10.1007/s10658-013-0342-0
| Functional characterization of a new pathogen induced xylanase inhibitor (RIXI) from rice
|
|-
|1072
|''TCD9''
|[[Os09g0563300]]
|10.1016/j.plantsci.2013.11.003
|Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage.
|
|-
|1074
|''OsBURP16''
|[[Os10g0409400]]
|10.1111/pce.12223
| Overexpression of stress-inducible OsBURP16, the β subunit of polygalacturonase 1, decreases pectin content and cell adhesion and increases abiotic stress sensitivity in rice
|
|-
|1075
|''OsDSR2''
|[[Os01g0839200]]
|10.1007/s00299-013-1532-0
|Overexpression of a new stress-repressive gene OsDSR2 encodinga protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice
|
|-
|1076
|''ssg4''
|[[Os01g0179400]]
|10.1104/pp.113.229591
| Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm
|
|-
|1080
|''OsAMT1;1''
|[[Os04g0509600]]
|10.1093/jxb/ert458
| AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions
|
|-
|1082
|''WLP1''
|[[Os01g0749200]]
|10.1007/s11103-013-0134-0
| The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions
|
|-
|1083
|''ADH1''
|[[Os11g0210300]]
|10.1093/aob/mct305
|
|Annotated
|-
|1084
|''OsAlba1''
|[[Os01g0173100]]
|10.1016/j.phytochem.2014.01.015
|
|Annotated
|-
|1086
|''OsDCL3a''
|[[Os01g0909200]]
|10.1073/pnas.1318131111
|
|Annotated
|-
|1087
|''SGL''
|[[Os05g0154700]]
|10.1007/s00299-013-1524-0
|
|Annotated
|-
|1088
|''OsHI-XIP''
|[[Os05g0247100]]
|10.1007/s11105-013-0661-5
| Overexpression of a Xylanase Inhibitor Gene, OsHI-XIP, Enhances Resistance in Rice to Herbivore
|
|-
|1089
|''OsZHD1''
|[[Os09g0466400]]
|10.1007/s00425-013-2009-7
|
|Annotated
|-
|1090
|''CYP96B4''
|[[Os03g0140400]]
|10.1371/journal.pone.0088068
| The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth.
|
|-
|1092
|''FLO6''
|[[Os03g0686900]]
|10.1111/tpj.12444
| FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm
|
|-
|1093
|''OsKS2''
|[[Os04g0612000]]
|10.1111/plb.12069
|
|Annotated
|-
|1094
|''OsDG2''
|[[Os02g0606000]]
| 10.1007/s00299-013-1549-4
| The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage
|
|-
|1095
|''Hwi2''
|[[Os01g0795400]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1222
|''Hwi1''
|[[Os11g0173500]]
|10.1038/ncomms4357
|
|A two-locus interaction causes interspecific hybrid weakness in rice
|-
|1096
|''OsGLO4''
|[[Os07g0152900]]
|10.1111/ppl.12104
| Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
|
|-
|1097
|''DL''
|[[Os03g0215200]]
|10.1111/tpj/12411
|
|Annotated
|-
|1098
|''OsETT2''
|[[Os01g0670800]]
|10.1111/tpj/12411
| The DROOPING LEAF and OsETTIN2 genes promote awndevelopment in rice
|
|-
|1099
|''SHL2''
|[[Os01g0527600]]
|10.1111/tpj/12411
| Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
|
|-
|1100
|''OsLIS''
|[[Os02g0121700]]
|10.1111/pce.12169
| Jasmonate induction of the monoterpene linalool confers resistance to rice bacterial blight and its biosynthesis is regulated by JAZ protein in rice
|
|-
|1101
|''OsPT9''
|[[Os06g0324800]]
|10.1111/pce.12224
|Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1102
|''OsPT10''
|[[Os06g0325200]]
|10.1111/pce.12224
| Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice.
|
|-
|1106
|''LTG1''
|[[Os02g0622100]]
|10.1111/tpj.12487
| Annotated
|-
|1107
|''OsRPK1''
|[[Os05g0486100]]
|10.1016/j.bbagen.2014.01.003
|
|Annotated
|-
|1108
|''d89''
|[[Os05g0333200]]
|10.1007/s10681-014-1071-y
|
|Annotated
|-
|1112
|''OsEMF2b''
|[[Os09g0306800]]
|10.1007/s11105-014-0733-1
| OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice
|
|-
|1117
|''OsFIE1''
|[[Os08g0137250]]
|10.1104/pp.113.232413
|
|Annotated
|-
|1118
|''OsUGE1''
|[[Os05g0595100]]
|10.1371/journal.pone.0096158
| Functional Characterization of the Rice UDP-glucose 4- epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
|
|-
|1119
|''OsATG7''
|[[Os01g0614900]]
|10.4161/auto.28279
| OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development
|
|-
|1120
|''chalk5''
|[[Os05g0156900]]
|10.1038/ng.2923
| Chalk5 encodes a vacuolar H + -translocating pyrophosphatase influencing grain chalkiness in rice
|
|-
|1122
|''cl7(t)''
|[[Os07g0616000]]
|10.1093/jxb/eru074
|Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation
|
|-
|1123
|''OsGPX1''
|[[Os04g0556300]]
|10.1007/s10535-014-0394-9
|Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1124
|''OsGPX4''
|[[Os06g0185900]]
|10.1007/s10535-014-0394-9
| Chloroplastic and mitochondrial GPX genes play a critical role in rice development
|
|-
|1125
|''D1352''
|[[Os03g0232600]]
|10.1007/s11032-014-0021-7
|
|Annotated
|-
|1126
|''OsAHP1''
|[[Os08g0557700]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1127
|''OsAHP2''
|[[Os09g0567400]]
|10.1104/pp.113.232629
| Two Rice Authentic Histidine Phosphotransfer Proteins, OsAHP1 and OsAHP2, Mediate Cytokinin Signaling and Stress Responses in Rice
|
|-
|1128
|''OsWR2''
|[[Os06g0604000]]
|10.1007/s11105-013-0687-8
|
|Annotated
|-
|1129
|''Se14''
|[[Os03g0151300]]
|10.1371/journal.pone.0096064
| Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1
|
|-
|1130
|''MET1b''
|[[Os07g0182900]]
|10.1007/s11103-014-0178-9
|
|Annotated
|-
|1131
|''MET1a''
|[[Os03g0798300]]
|10.1007/s11103-014-0178-9
| Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
|
|-
|1133
|''smos1''
|[[Os05g0389000]]
|10.1093/pcp/pcu023
| A Novel AP2-Type Transcription Factor, SMALL ORGAN SIZE1, Controls Organ Size Downstream of an Auxin Signaling Pathway
|
|-
|1135
|''OsCPK4''
|[[Os02g0126400]]
|10.1104/pp.113.230268
|
|Annotated
|-
|1136
|''OsPAD4''
|[[Os11g0195500]]
|10.1111/tpj.12500
| Rice OsPAD4 functions differently from Arabidopsis AtPAD4 in host-pathogen interactions
|
|-
|1137
|''OsMOGS''
|[[Os01g0921200]]
|10.1111/tpj.12497
|
|Annotated
|-
|1138
|''OsJAR1''
|[[Os05g0586200]]
|10.1111/pce.12201
|
|Annotated
|-
|1139
|''OsMADS34''
|[[Os03g0756100]]
|10.1111/nph.12657
|
|Annotated
|-
|1140
|''OsMRP5''
|[[Os03g0142800]]
|10.1007/s11248-014-9792-1
| Seed-specific silencing of OsMRP5 reduces seed phytic acid and weight in rice
|
|-
|1141
|''TMS 9-1(OsMS1)''
|[[Os09g0449000]]
|10.1007/s00122-014-2289-8
|
|Annotated
|-
|1142
|''epsps''
|[[Os06g0133900]]
|10.1111/nph.12428
|A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide
|
|-
|1143
|''DWT1''
|[[Os01g0667400]]
|10.1371/journal.pgen.1004154
|
|Annotated
|-
|1144
|''DP2''
|[[Os02g0531600]]
|10.1007/s13258-013-0169-2
| Morphological characteristics and gene mapping of a dense panicle (dp2) mutant in rice (Oryza sativa L.)
|
|-
|1145
|''OsRACK1A''
|[[Os01g0686800]]
|10.1371/journal.pone.0097120
|OsRACK1 Is Involved in Abscisic Acid- and H 2 O 2 - Mediated Signaling to Regulate Seed Germination in Rice (Oryza sativa, L.)
|
|-
|1223
|''OsCAF1A''
|[[Os08g0440300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1146
|''OsCAF1B''
|[[Os04g0684900]]
|10.1007/s11103-014-0196-7
|
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|-
|1147
|''OsCAF1G''
|[[Os09g0416800]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1148
|''OsCAF1H''
|[[Os02g0796300]]
|10.1007/s11103-014-0196-7
| Divergence of the expression and subcellular localization of CCR4‐associated factor 1 (CAF1) deadenylase proteins in Oryza sativa
|
|-
|1149
|''OsLOX2 (L-2)''
|[[Os03g0738600]]
|10.1007/s11248-014-9803-2
| OsLOX2, a rice type I lipoxygenase, confers opposite effects on seed germination and longevity
|
|-
|1150
|''OsNAC111''
|[[Os10g0177000]]
|10.1094/mpmi-03-14-0065-r
| OsNAC111, a Blast Disease–Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes
|
|-
|1152
|''OsCKX4''
|[[Os01g0940000]]
|10.1104/pp.114.238584
|
|Annotated
|-
|1155
|''DIF1''
|[[Os01g0626400]]
|10.1371/journal.pone.0102529
|
|Annotated
|-
|1164
|''CYP93G1''
|[[Os04g0101400]]
|10.1104/pp.114.239723
| Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
|
|-
|1224
|''CYP93G2''
|[[Os06g0102100]]
|10.1104/pp.114.239723
| CYP93G2 Is a Flavanone 2-Hydroxylase Required for C-Glycosylflavone Biosynthesis in Rice
|
|-
|1165
|''OsMYB4P''
|[[Os11g0558200]]
|10.1016/j.plaphy.2014.02.024
| Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice
|
|-
|1166
|''rip-3 (a-tubulin)''
|[[Os03g0726100]]
|10.1016/j.plaphy.2014.04.011
| Water-stress-induced inhibition of a -tubulin gene expression during growth, and its implications for reproductive success in rice
|
|-
|1167
|''OsRDR1''
|[[Os02g0736200]]
|10.1186/1471-2229-14-177
| Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice
|
|-
|1168
|''ygl7''
|[[Os03g0811100]]
|10.1371/journal.pone.0099564
|
|Annotated
|-
|1169
|''OsDREB6''
|[[Os09g0369000]]
|10.1007/s12374-013-0480-0
| Characterization of OsDREB6 Responsive to Osmotic and Cold Stresses in Rice
|
|-
|1170
|''OsPAO7''
|[[Os09g0368500]]
|10.1093/pcp/pcu047
| Polyamine Oxidase 7 is a Terminal Catabolism-Type Enzyme in Oryza sativa and is Specifically Expressed in Anthers
|
|-
|1172
|''OsAGPL2''
|[[Os01g0633100]]
|10.1093/pcp/pcu057
| The Rice Endosperm ADP-Glucose Pyrophosphorylase Large Subunit is Essential for Optimal Catalysis and Allosteric Regulation of the Heterotetrameric Enzyme
|
|-
|1173
|''OsMYB103L''
|[[Os08g0151300]]
|10.1186/1471-2229-14-158
| OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice
|
|-
|1174
|''DRO1''
|[[Os09g0439800]]
|10.1038/srep05563
|
|Annotated
|-
|1175
|''FIB''
|[[Os01g0169800]]
|10.1111/tpj.12517
|
|Annotated
|-
|1176
|''OsNIP3;1''
|[[Os10g0513200]]
|10.1111/tpj.12511
| OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions
|
|-
|1177
|''OsETOL1''
|[[Os03g0294700]]
|10.1111/tpj.12508
|
|Annotated
|-
|1178
|''OsGLY1-11.2''
|[[Os08g0191700]]
|10.1111/tpj.12521
| A unique Ni 2+ -dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response
|
|-
|1179
|''OsKTN80a''
|[[Os10g0494800]]
|10.1111/jipb.12170
| Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza Sativa
|
|-
|1180
|''WRKY45''
|[[Os05g0322900]]
|10.1007/s11103-014-0221-x
|
|Annotated
|-
|1181
|''OsRZFP34''
|[[Os01g0719100]]
|10.1007/s11103-014-0217-6
|Expression of a gene encoding a rice RING zinc‐finger protein, OsRZFP34, enhances stomata opening
|Stress
|-
|1182
|''OsSPS1''
|[[Os01g0919400]]
|10.1016/j.plantsci.2014.05.018
|
|Annotated
|-
|1183
|''AM1''
|[[Os04g0682800]]
|10.1007/s00299-014-1639-y
|
|Annotated
|-
|1184
|''OsMPK3''
|[[Os02g0148100]]
|10.1007/s00299-014-1620-9
|
|Annotated
|-
|1186
|''OsMet1-2''
|[[Os07g0182900]]
|10.1073/pnas.1410761111
|
|Annotated
|-
|1189
|''sped1''
|[[Os06g0597500]]
|10.1534/genetics.114.163931
|Regulation of Inflorescence Branch Development in Rice Through a Novel Pathway Involving the Pentatricopeptide Repeat Protein sped1-D
|
|-
|1190
|''OsXXT1''
|[[Os03g0300000]]
|10.1093/jxb/eru189
| Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa
|
|-
|1191
|''Nrat1''
|[[Os02g0131800]]
|10.1093/jxb/eru201
|
|Annotated
|-
|1192
|''SLCHL4 (NAL1)''
|[[Os04g0615000]]
|10.1093/mp/ssu055
|
|Annotated
|-
|1193
|''OsNMD3''
|[[Os10g0573900]]
|10.1093/jxb/eru150
|
|Annotated
|-
|1194
|''OsRAN1''
|[[Os01g0611100]]
|10.1093/jxb/eru178
|
|Annotated
|-
|1195
|''OsABCB14''
|[[Os04g0459000]]
|10.1111/tpj.12544
| OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa.L)
|
|-
|1196
|''OsRAD51D''
|[[Os09g0104200]]
|10.1111/tpj.12558
|
|Annotated
|-
|1197
|''OsYUCCA11''
|[[Os12g0189500]]
|10.1111/tpj.12553
|
|Annotated
|-
|1198
|''Roc5(rl(t))''
|[[Os02g0674800]]
|10.1007/s11434-014-0357-8
|Isolation and characterization of rl (t) , a gene that controls leaf rolling in rice
|
|-
|1199
|''OsWRKY42''
|[[Os02g0462800]]
|10.14348/molcells.2014.0128
|
|Annotated
|-
|1200
|''OsB12D1''
|[[Os07g0604700]]
|10.3390/ijms150813461
|The Mitochondrion-Located Protein OsB12D1 Enhances Flooding Tolerance during Seed Germination and Early Seedling Growth in Rice
|Stress
|-
|1201
|''OsHO2''
|[[Os03g0395000]]
|10.1007/s00425-014-2116-0
|Annotated
|Biosynthesis
|-
|1202
|''CL4 (= dwarf11)''
|[[Os04g0469800]]
|10.1007/s11434-014-0568-z
|Annotated
|Development
|-
|1203
|''OsEXPA3''
|[[Os05g0276500]]
|10.2135/cropsci2013.11.0746
|Repression of OsEXPA3 Expression Leadsto Root System Growth Suppression in Rice
|Stress,Development
|-
|1204
|''bHLH142''
|[[Os01g0293100]]
|10.1105/tpc.114.126292
|Annotated
|Development
|-
|1205
|''SIT1''
|[[Os02g0640500]]
|10.1105/tpc.114.125187
|The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1206
|''SIT2''
|[[Os04g0531400]]
|10.1105/tpc.114.125187
| The Receptor-Like Kinase SIT1 Mediates Salt
Sensitivity by Activating MAPK3/6 and Regulating
Ethylene Homeostasis in Rice
|Stress
|-
|1207
|''CPK18''
|[[Os07g0409900]]
|10.1105/tpc.114.126441
| Direct Phosphorylation and Activation of a Mitogen-Activated
Protein Kinase by a Calcium-Dependent Protein
Kinase in Rice
|Stress
|-
|1208
|''OsHPR1''
|[[Os02g0101500]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1222
|''OsHPR2''
|[[Os01g0228600]]
|10.1111/jipb.12125
| Two hydroxypyruvate reductases encoded by OsHPR1 and OsHPR2 are involved in
photorespiratory metabolism in rice
|Metabolism
|-
|1209
|''OsCAD2''
|[[Os02g0187800]]
|10.1038/srep06567
|Annotated
|
|-
|1210
|''OsSLI1''
|[[Os02g0649300]]
|10.1155/2014/809353
|OsSLI1, a Homeodomain Containing Transcription Activator, Involves Abscisic Acid Related Stress Response in Rice (Oryza sativa L.)
|Stress,Development
|-
|1211
|''OsMKK1 (MAPKK)''
|[[Os06g0147800]]
|10.1016/j.plantsci.2014.08.007
|The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice
|Stress
|-
|1212
|''SPK1(SYG1)''
|[[Os06g0603600]]
|10.1073/pnas.1404680111
|Annotated
|Finished
|-
|1213
|''SPK2(SYG2)''
|[[Os02g0202200]]
|10.1073/pnas.1404680111
| Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner
|
|-
|1215
|''OsAAP6''
|[[Os01g0878700]]
|10.1038/ncomms5847
| OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice
|
|-
|1216
|''OsSOT1(STV11)''
|[[Os11g0505300]]
|10.1038/ncomms5768
| STV11 encodes a sulphotransferase and confers durable resistance to rice stripe virus
|
|-
|1217
|''tms5''
|[[Os02g0214300]]
|10.1038/srep06567
|
|Annotated
|-
|1218
|''CYP703A3''
|[[Os08g0131100]]
|10.1111/jipb.12212
|Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine
|Development
|-
|1219
|''OsGUN4''
|[[Os11g0267000]]
|10.1007/s00122-014-2393-9
|A down-regulated epi-allele of the genomes uncoupled 4 gene generates a xantha marker trait in rice.
|Color
|-
|1220
|''OsBADH1''
|[[Os04g0464200]]
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|OsBADH1 is possibly involved in acetaldehyde oxidation in rice plant peroxisomes
|Stress
|-
|243
|''gh2''
|[[Os02g0187800]]
|10.1104/pp.105.073007
|Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production
|Stress
|-
|1221
|''OsABCC1''
|[[Os04g0620000]]
|10.1073/pnas.1414968111
|A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain
|Stress
|-
|demo
|demo
|[[Os04g0459000]]
|demo
|demo
|demo
|}