http://192.168.164.12:81/ricewiki/api.php?action=feedcontributions&feedformat=atom&user=Younger123456 2026-05-27T10:51:40Z User contributions MediaWiki 1.30.0 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=173198 2014-05-27T11:04:00Z

<p>Younger123456: /* Extension */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> ===Extension===<br /> [[File:younger1.png]]RDV P2 Protein Interacts with Rice ent-Kaurene Oxidases<br /> (Shifeng Zhu et al,.2005)<br /> <br /> [[File:younger2.jpg]]&quot;RDV-infected rice plants sprayed with GA3 grew almost as tall as the uninfected rice plants. Significantly, application of indole-3-acetic acid (IAA) to the RDV-infected plants failed to restore the height of infected plants &quot;(Shifeng Zhu et al,.2005)<br /> [[File:younger3.png]]GA and Pollen Activities (Tory et al.,2007)<br /> [[File:younger4.jpg]](Tory et al.,2007)<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> D35 is owing to 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine. Also ,it has high homologous with arabidopsis and pumpkin.<br /> <br /> ==Labs working on this gene==<br /> a Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan<br /> b Japan Society for the Promotion of Science, Chiyoda, Tokyo 102-8472, Japan<br /> c Honda Research Institute Japan, Kazusa-Kamatari, Kisarazu-shi, Chiba 292-0818, Japan<br /> d Graduate School of Life Science, Tohoku University, Aoba, Sendai 980-8577, Japan<br /> e Peking-Yale Joint Center for Plant Molecular Genetics and Agrobiotechnology, National Laboratory<br /> of Protein Engineering and Plant Genetic Engineering, College of Life Science, Peking University,<br /> Beijing 100871, China<br /> f 1Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi 464-8601, Japan.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Younger1.png&diff=173197 2014-05-27T11:00:31Z

<p>Younger123456: uploaded a new version of &amp;quot;File:Younger1.png&amp;quot;</p> <hr /> <div></div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=173196 2014-05-27T10:58:56Z

<p>Younger123456: /* Extension */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> ===Extension===<br /> [[File:younger1.jpg]]RDV P2 Protein Interacts with Rice ent-Kaurene Oxidases<br /> (Shifeng Zhu et al,.2005)<br /> <br /> [[File:younger2.jpg]]&quot;RDV-infected rice plants sprayed with GA3 grew almost as tall as the uninfected rice plants. Significantly, application of indole-3-acetic acid (IAA) to the RDV-infected plants failed to restore the height of infected plants &quot;(Shifeng Zhu et al,.2005)<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> D35 is owing to 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine. Also ,it has high homologous with arabidopsis and pumpkin.<br /> <br /> ==Labs working on this gene==<br /> a Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan<br /> b Japan Society for the Promotion of Science, Chiyoda, Tokyo 102-8472, Japan<br /> c Honda Research Institute Japan, Kazusa-Kamatari, Kisarazu-shi, Chiba 292-0818, Japan<br /> d Graduate School of Life Science, Tohoku University, Aoba, Sendai 980-8577, Japan<br /> e Peking-Yale Joint Center for Plant Molecular Genetics and Agrobiotechnology, National Laboratory<br /> of Protein Engineering and Plant Genetic Engineering, College of Life Science, Peking University,<br /> Beijing 100871, China<br /> f 1Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi 464-8601, Japan.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=173191 2014-05-27T10:57:02Z

<p>Younger123456: /* Annotated Information */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> ===Extension===<br /> [[File:younger1]]RDV P2 Protein Interacts with Rice ent-Kaurene Oxidases<br /> (Shifeng Zhu et al,.2005)<br /> <br /> [[File:younger2]]&quot;RDV-infected rice plants sprayed with GA3 grew almost as tall as the uninfected rice plants. Significantly, application of indole-3-acetic acid (IAA) to the RDV-infected plants failed to restore the height of infected plants &quot;(Shifeng Zhu et al,.2005)<br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> D35 is owing to 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine. Also ,it has high homologous with arabidopsis and pumpkin.<br /> <br /> ==Labs working on this gene==<br /> a Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan<br /> b Japan Society for the Promotion of Science, Chiyoda, Tokyo 102-8472, Japan<br /> c Honda Research Institute Japan, Kazusa-Kamatari, Kisarazu-shi, Chiba 292-0818, Japan<br /> d Graduate School of Life Science, Tohoku University, Aoba, Sendai 980-8577, Japan<br /> e Peking-Yale Joint Center for Plant Molecular Genetics and Agrobiotechnology, National Laboratory<br /> of Protein Engineering and Plant Genetic Engineering, College of Life Science, Peking University,<br /> Beijing 100871, China<br /> f 1Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi 464-8601, Japan.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=173189 2014-05-27T10:52:18Z

<p>Younger123456: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> D35 is owing to 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine. Also ,it has high homologous with arabidopsis and pumpkin.<br /> <br /> ==Labs working on this gene==<br /> a Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan<br /> b Japan Society for the Promotion of Science, Chiyoda, Tokyo 102-8472, Japan<br /> c Honda Research Institute Japan, Kazusa-Kamatari, Kisarazu-shi, Chiba 292-0818, Japan<br /> d Graduate School of Life Science, Tohoku University, Aoba, Sendai 980-8577, Japan<br /> e Peking-Yale Joint Center for Plant Molecular Genetics and Agrobiotechnology, National Laboratory<br /> of Protein Engineering and Plant Genetic Engineering, College of Life Science, Peking University,<br /> Beijing 100871, China<br /> f 1Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi 464-8601, Japan.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Younger4.jpg&diff=173188 2014-05-27T10:51:15Z

<p>Younger123456: </p> <hr /> <div></div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Younger3.png&diff=173187 2014-05-27T10:50:55Z

<p>Younger123456: </p> <hr /> <div></div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Younger1.png&diff=173186 2014-05-27T10:50:35Z

<p>Younger123456: </p> <hr /> <div></div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=File:Younger2.jpg&diff=173185 2014-05-27T10:50:08Z

<p>Younger123456: </p> <hr /> <div></div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=173178 2014-05-27T10:42:14Z

<p>Younger123456: /* Labs working on this gene */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> D35 is owing to 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine. Also ,it has high homologous with arabidopsis and pumpkin.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> a Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan<br /> b Japan Society for the Promotion of Science, Chiyoda, Tokyo 102-8472, Japan<br /> c Honda Research Institute Japan, Kazusa-Kamatari, Kisarazu-shi, Chiba 292-0818, Japan<br /> d Graduate School of Life Science, Tohoku University, Aoba, Sendai 980-8577, Japan<br /> e Peking-Yale Joint Center for Plant Molecular Genetics and Agrobiotechnology, National Laboratory<br /> of Protein Engineering and Plant Genetic Engineering, College of Life Science, Peking University,<br /> Beijing 100871, China<br /> f 1Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi 464-8601, Japan.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0746400&diff=172393 2014-05-25T14:00:30Z

<p>Younger123456: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> 　　　D10,carotenoid cleavage dioxygenase 8（OsCCD8）controls lateral bud outgrowth of rice, and then ultimate control of rice tillers. OsCCD8 is an important enzyme of biosynthesis Strigolactones process.It´s involved in the biosynthesis of Strigolactones / Strigolactones derivative SL.　D10 may plays an important role in regulate Strigolactones and its derivatives by auxin , but may reduce the transport ability of auxin and promote the synthesis of cytokinin by reducing the auxin levels at the same time.<br /> <br /> ===Expression===<br /> D10 is a carotenoid cleavage dioxygenase, mainly expressed in vascular cells of various organs, and induced by exogenous auxin.<br /> In addition, the expression of D10 up-regulated in 6 mutated branches,including d3,d10,d14,d17,d27,htdi.But MAX2 and MAX3 rice homologous gene D3 and HTD1 have no expression change in these mutants.<br /> These finding may indicate that D10's transcription may be key factor of regulating branches inhibition pathway.(Arie et al.,2007)<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> 　　<br /> 　　　D10 is MAX4/RMS1/DAD1 orthologous genes in rice<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1 The State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese <br /> Academy of Sciences<br /> 2 College of Biological Sciences and Biotechnology, Beijing Forestry University<br /> 3 Department of Applied Biological Chemistry, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo<br /> 4 RIKEN Plant Science Center, Japan<br /> 5 Research Institute for Bioresources, Okayama University, Kurashiki, Okayama 710-0046, Japan<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1. Shuying Zhang;Gang Li;Jun Fang;Weiqi Chen;Haipai Jiang;Junhuang Zou;Xue Liu;Xianfeng Zhao;Xiaobing Li;Chengcai Chu;Qi Xie;Xiangning Jiang;Lihuang Zhu<br /> The Interactions among DWARF10, Auxin and Cytokinin Underlie Lateral Bud Outgrowth in Rice.Journal of Integrative Plant Biology, 2010, 52(7): 626-638<br /> <br /> 2. Shinsaku Ito;Nobutaka Kitahata;Mikihisa Umehara;Atsushi Hanada;Atsutaka Kato;Kotomi Ueno;Kiyoshi Mashiguchi;Junko Kyozuka;Koichi Yoneyama;Shinjiro Yamaguchi;Tadao Asami .A New Lead Chemical for Strigolactone Biosynthesis Inhibitors. Plant and Cell Physiology, 2010, 51(7): 1143-1150<br /> <br /> 3. Tomotsugu Arite;Hirotaka Iwata;Kenji Ohshima;Masahiko Maekawa;Masatoshi Nakajima;Mikiko Kojima;Hitoshi Sakakibara and Junko Kyozuka<br /> DWARF10, an RMS1/MAX4/DAD1 ortholog, controls lateral bud outgrowth in rice.The Plant Journal, 2007, 51(6): 1019-1029<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os01g0746400|<br /> Description = Carotenoid oxygenase family protein|<br /> Version = NM_001050764.2 GI:297597605 GeneID:4326177|<br /> Length = 3109 bp|<br /> Definition = Oryza sativa Japonica Group Os01g0746400, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|<br /> AP = Chromosome 1:32981304..32984412|<br /> CDS = 32981304..32981461,32981562..32981854,32981954..32982147,32982254..32982997,32984092..32984412&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008394:32981304..32984412<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008394:32981304..32984412<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtctcccgctatgctgcaggcgtcgtcgctgtgcgtatccgcggcgctgtcaggcgccgcgagccggccgggccgcctggccagccaggggcaccagggcaagcgggccgtggcgcagcctctcgcggctagcgccgtgacggaggcagcgccgcccgcgccggtcgtcgcgccgccggcccgccccgtcgacgccccgcggcgccgtggcggacgtggcggcggcggaggcggcggcgagctcgtggcgtggaagagtgtacggcaggagaggtgggagggtgcgctcgaggtggacggagagctgcctctctggctggatggcacgtacctgaggaacggcccgggactatggaacctcggcgactacggcttccggcacctgttcgacggctacgcgacgctggtgcgcgtctcgttccgcggcggccgcgccgtgggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtgtgctaccgcgagttctcggaggtgcccaagccggacaacttcctgtcctacgtcggccagctggcgaccctcttctcgggctcgtcgctcaccgacaactccaacaccggcgtcgtcatgctcggcgacggccgcgtgctctgcctcacggagaccatcaagggctccatccaggtcgacccggacacgctcgacacggtcggcaagttccagtacacggacaagctgggcgggctgatccactcggcgcacccgatcgtgaccgacaccgagttctggacgctgatccccgacctgatccggcccggctacgtggtggcgaggatggacgccggtagcaacgagaggcagttcgtcggcagggtggactgccgcggcgggccggcgccagggtgggtgcactcgttccccgtcaccgagcactacgtcgtcgtgccggagatgccgctccgctactgcgccaagaacctcctccgcgccgagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtcatgtgcaaggccagcggcaagattgtggcgagcgtggaggtgccgccgttcgtgacgttccacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggcgatcatcgccgactgctgcgagcacaacgccaacaccgccatcctcgacaagctccgcctccacaacctccgctcctccagcggccaggacgtcctccccgacgccagggtggggcggttcaggatccccctggacgggagccagttcggcgagctggagacggcgctggacccggaggagcacgggcggggcatggacatgtgcagcatcaacccggcgcacgtcggcagggagtaccggtacgcctacgcctgcggcgcccgccggccgtgcaacttccccaacacgctcaccaaggtcgacctggtggagaggacggccaagaactggcacgaggagggctccgtgccgtccgagcccttcttcgtgccacgccccggcgccaccgaggaagacgacggcgtggcgatatcgatggtgagcgccaaggacgggtcgggctatgcgctggtgctggacggcaagacgttcgaggaggtcgcgcgggccaagttcccgtacgggctgccctacggcttgcactgctgctgggtgcccaggaaaaggaacagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSPAMLQASSLCVSAALSGAASRPGRLASQGHQGKRAVAQPLAA SAVTEAAPPAPVVAPPARPVDAPRRRGGRGGGGGGGELVAWKSVRQERWEGALEVDGE LPLWLDGTYLRNGPGLWNLGDYGFRHLFDGYATLVRVSFRGGRAVGAHRQIESEAYKA ARAHGKVCYREFSEVPKPDNFLSYVGQLATLFSGSSLTDNSNTGVVMLGDGRVLCLTE TIKGSIQVDPDTLDTVGKFQYTDKLGGLIHSAHPIVTDTEFWTLIPDLIRPGYVVARM DAGSNERQFVGRVDCRGGPAPGWVHSFPVTEHYVVVPEMPLRYCAKNLLRAEPTPLYK FEWHLESGSYMHVMCKASGKIVASVEVPPFVTFHFINAYEETDEEGRVTAIIADCCEH NANTAILDKLRLHNLRSSSGQDVLPDARVGRFRIPLDGSQFGELETALDPEEHGRGMD MCSINPAHVGREYRYAYACGARRPCNFPNTLTKVDLVERTAKNWHEEGSVPSEPFFVP RPGATEEDDGVAISMVSAKDGSGYALVLDGKTFEEVARAKFPYGLPYGLHCCWVPRKR NSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2952..3109#2559..2851#2266..2459#1416..2159#1..321#atgtctcccgctatgctgcaggcgtcgtcgctgtgcgtatccgcggcgctgtcaggcgccgcgagccggccgggccgcctggccagccaggggcaccagggcaagcgggccgtggcgcagcctctcgcggctagcgccgtgacggaggcagcgccgcccgcgccggtcgtcgcgccgccggcccgccccgtcgacgccccgcggcgccgtggcggacgtggcggcggcggaggcggcggcgagctcgtggcgtggaagagtgtacggcaggagaggtgggagggtgcgctcgaggtggacggagagctgcctctctggctggtgggttaagcctcctactgattgcaaatctccctaaatatgacttgatttggcttttgccttctctccaccctaattaagtattcatgaacacaccataacctcagcattttataagatctgccggtggtcaagctaaggctagccgtgcatttttcattcaagaatgcgaatcttttctgttattttgattcaaaggtttcccagtactccatatcgctttcttgagatcatctataaactaaagatccttttgaacatcttagtaaaaaagcatgcacaacatcttcccacacattgagaaatacgaaaggcactttctggaccacatcactgtgcaacaaatcctttataattaacctaaccattttcatcttgtagcatctccttgattagtgcaggctaaccgctgacctagagcacatatatgcatatagccccagaagggtcctaaaaaggtaccagctttggccacgtacctagcatatttttaccagcagtatctaacacgccagggtatattacttgccgactgtcatttttaatttccactgtgccagcagttgctgaagcactcacccaaatcttcagtaatttgatcgacaaagaggagggcgacactaacttaccctatgctggcctagcgaaaaggagatggcatcttggcactcacgatgcttgcggggaacacaacatatatacccagattctctgctcacccctagcttcgatcggcgacaacaatggcatcactgtcttgtggttgcagttttgttgcaccccgcaactctctgaaaacaaaagtcaaaaaccttggtctcccctaactccaagtgatcttatcactgttcttgccaattttgatagtgacttgatttgaggaattaatacaggtgtacatgtagtataatattgttgtaactttgtagttacactcactaagctatggataatacaatcgtttcagctaattaaaaatgcaatcttctgaggtaagctcgtggatagattaatttgtcggtcgttaattagaggtggacggatttgtcgacgtgctgcaaatgattgatcggatcgatgcatacttgctgcaggatggcacgtacctgaggaacggcccgggactatggaacctcggcgactacggcttccggcacctgttcgacggctacgcgacgctggtgcgcgtctcgttccgcggcggccgcgccgtgggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtgtgctaccgcgagttctcggaggtgcccaagccggacaacttcctgtcctacgtcggccagctggcgaccctcttctcgggctcgtcgctcaccgacaactccaacaccggcgtcgtcatgctcggcgacggccgcgtgctctgcctcacggagaccatcaagggctccatccaggtcgacccggacacgctcgacacggtcggcaagttccagtacacggacaagctgggcgggctgatccactcggcgcacccgatcgtgaccgacaccgagttctggacgctgatccccgacctgatccggcccggctacgtggtggcgaggatggacgccggtagcaacgagaggcagttcgtcggcagggtggactgccgcggcgggccggcgccagggtgggtgcactcgttccccgtcaccgagcactacgtcgtcgtgccggagatgccgctccgctactgcgccaagaacctcctccgcgccgagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtcatgtgcaaggccagcggcaagattgtaagccatcatcaatcgctgccgcccgtagtgcgttcccgttttgcctatttaattggttgggtgatctaatgatgatatttgtcgggacgatggccaaccgaaggtggcgagcgtggaggtgccgccgttcgtgacgttccacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggcgatcatcgccgactgctgcgagcacaacgccaacaccgccatcctcgacaagctccgcctccacaacctccgctcctccagcggccaggacgtcctccccgacgccaggtacgtacacacacgagccacacgacgacgtcccgccgtcaatttgctacgctacgcatgcacgtatgcacgatggatgacggggaacaccatgtgtagggtggggcggttcaggatccccctggacgggagccagttcggcgagctggagacggcgctggacccggaggagcacgggcggggcatggacatgtgcagcatcaacccggcgcacgtcggcagggagtaccggtacgcctacgcctgcggcgcccgccggccgtgcaacttccccaacacgctcaccaaggtcgacctggtggagaggacggccaagaactggcacgaggagggctccgtgccgtccgagcccttcttcgtgccacgccccggcgccaccgaggaagacgacggttagtgtcaccatctctcctcgttggctgcgtatacgtacgtcttggctttgcctcgtttcgtttgtaataacttgaccaactctgttattgatggcaggcgtggcgatatcgatggtgagcgccaaggacgggtcgggctatgcgctggtgctggacggcaagacgttcgaggaggtcgcgcgggccaagttcccgtacgggctgccctacggcttgcactgctgctgggtgcccaggaaaaggaacagcaagtaa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050764.2 RefSeq:Os01g0746400]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 1]]<br /> [[Category:Chromosome 1]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0746400&diff=172368 2014-05-25T12:07:49Z

<p>Younger123456: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> 　　　D10,carotenoid cleavage dioxygenase 8（OsCCD8）controls lateral bud outgrowth of rice, and then ultimate control of rice tillers. OsCCD8 is an important enzyme of biosynthesis Strigolactones process.It´s involved in the biosynthesis of Strigolactones / Strigolactones derivative SL.　D10 may plays an important role in regulate Strigolactones and its derivatives by auxin , but may reduce the transport ability of auxin and promote the synthesis of cytokinin by reducing the auxin levels at the same time.<br /> <br /> ===Expression===<br /> D10 is a carotenoid cleavage dioxygenase, mainly expressed in vascular cells of various organs, and induced by exogenous auxin.In addition, the expression of D10 up-regulated in 6 mutated branches,including d3,d10,d14,d17,d27,htdi.But MAX2 and MAX3 rice homologous gene D3 and HTD1 have no expression change in these mutants.These finding may indicate that D10's transcription may be key factor of regulating branches inhibition pathway.(Arie et al.,2007)<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> 　　<br /> 　　　D10 is MAX4/RMS1/DAD1 orthologous genes in rice<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1 The State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese <br /> Academy of Sciences<br /> 2 College of Biological Sciences and Biotechnology, Beijing Forestry University<br /> 3 Department of Applied Biological Chemistry, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo<br /> 4 RIKEN Plant Science Center, Japan<br /> 5 Research Institute for Bioresources, Okayama University, Kurashiki, Okayama 710-0046, Japan<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1. Shuying Zhang;Gang Li;Jun Fang;Weiqi Chen;Haipai Jiang;Junhuang Zou;Xue Liu;Xianfeng Zhao;Xiaobing Li;Chengcai Chu;Qi Xie;Xiangning Jiang;Lihuang Zhu<br /> The Interactions among DWARF10, Auxin and Cytokinin Underlie Lateral Bud Outgrowth in Rice.Journal of Integrative Plant Biology, 2010, 52(7): 626-638<br /> <br /> 2. Shinsaku Ito;Nobutaka Kitahata;Mikihisa Umehara;Atsushi Hanada;Atsutaka Kato;Kotomi Ueno;Kiyoshi Mashiguchi;Junko Kyozuka;Koichi Yoneyama;Shinjiro Yamaguchi;Tadao Asami .A New Lead Chemical for Strigolactone Biosynthesis Inhibitors. Plant and Cell Physiology, 2010, 51(7): 1143-1150<br /> <br /> 3. Tomotsugu Arite;Hirotaka Iwata;Kenji Ohshima;Masahiko Maekawa;Masatoshi Nakajima;Mikiko Kojima;Hitoshi Sakakibara and Junko Kyozuka<br /> DWARF10, an RMS1/MAX4/DAD1 ortholog, controls lateral bud outgrowth in rice.The Plant Journal, 2007, 51(6): 1019-1029<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os01g0746400|<br /> Description = Carotenoid oxygenase family protein|<br /> Version = NM_001050764.2 GI:297597605 GeneID:4326177|<br /> Length = 3109 bp|<br /> Definition = Oryza sativa Japonica Group Os01g0746400, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|<br /> AP = Chromosome 1:32981304..32984412|<br /> CDS = 32981304..32981461,32981562..32981854,32981954..32982147,32982254..32982997,32984092..32984412&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008394:32981304..32984412<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008394:32981304..32984412<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtctcccgctatgctgcaggcgtcgtcgctgtgcgtatccgcggcgctgtcaggcgccgcgagccggccgggccgcctggccagccaggggcaccagggcaagcgggccgtggcgcagcctctcgcggctagcgccgtgacggaggcagcgccgcccgcgccggtcgtcgcgccgccggcccgccccgtcgacgccccgcggcgccgtggcggacgtggcggcggcggaggcggcggcgagctcgtggcgtggaagagtgtacggcaggagaggtgggagggtgcgctcgaggtggacggagagctgcctctctggctggatggcacgtacctgaggaacggcccgggactatggaacctcggcgactacggcttccggcacctgttcgacggctacgcgacgctggtgcgcgtctcgttccgcggcggccgcgccgtgggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtgtgctaccgcgagttctcggaggtgcccaagccggacaacttcctgtcctacgtcggccagctggcgaccctcttctcgggctcgtcgctcaccgacaactccaacaccggcgtcgtcatgctcggcgacggccgcgtgctctgcctcacggagaccatcaagggctccatccaggtcgacccggacacgctcgacacggtcggcaagttccagtacacggacaagctgggcgggctgatccactcggcgcacccgatcgtgaccgacaccgagttctggacgctgatccccgacctgatccggcccggctacgtggtggcgaggatggacgccggtagcaacgagaggcagttcgtcggcagggtggactgccgcggcgggccggcgccagggtgggtgcactcgttccccgtcaccgagcactacgtcgtcgtgccggagatgccgctccgctactgcgccaagaacctcctccgcgccgagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtcatgtgcaaggccagcggcaagattgtggcgagcgtggaggtgccgccgttcgtgacgttccacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggcgatcatcgccgactgctgcgagcacaacgccaacaccgccatcctcgacaagctccgcctccacaacctccgctcctccagcggccaggacgtcctccccgacgccagggtggggcggttcaggatccccctggacgggagccagttcggcgagctggagacggcgctggacccggaggagcacgggcggggcatggacatgtgcagcatcaacccggcgcacgtcggcagggagtaccggtacgcctacgcctgcggcgcccgccggccgtgcaacttccccaacacgctcaccaaggtcgacctggtggagaggacggccaagaactggcacgaggagggctccgtgccgtccgagcccttcttcgtgccacgccccggcgccaccgaggaagacgacggcgtggcgatatcgatggtgagcgccaaggacgggtcgggctatgcgctggtgctggacggcaagacgttcgaggaggtcgcgcgggccaagttcccgtacgggctgccctacggcttgcactgctgctgggtgcccaggaaaaggaacagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSPAMLQASSLCVSAALSGAASRPGRLASQGHQGKRAVAQPLAA SAVTEAAPPAPVVAPPARPVDAPRRRGGRGGGGGGGELVAWKSVRQERWEGALEVDGE LPLWLDGTYLRNGPGLWNLGDYGFRHLFDGYATLVRVSFRGGRAVGAHRQIESEAYKA ARAHGKVCYREFSEVPKPDNFLSYVGQLATLFSGSSLTDNSNTGVVMLGDGRVLCLTE TIKGSIQVDPDTLDTVGKFQYTDKLGGLIHSAHPIVTDTEFWTLIPDLIRPGYVVARM DAGSNERQFVGRVDCRGGPAPGWVHSFPVTEHYVVVPEMPLRYCAKNLLRAEPTPLYK FEWHLESGSYMHVMCKASGKIVASVEVPPFVTFHFINAYEETDEEGRVTAIIADCCEH NANTAILDKLRLHNLRSSSGQDVLPDARVGRFRIPLDGSQFGELETALDPEEHGRGMD MCSINPAHVGREYRYAYACGARRPCNFPNTLTKVDLVERTAKNWHEEGSVPSEPFFVP RPGATEEDDGVAISMVSAKDGSGYALVLDGKTFEEVARAKFPYGLPYGLHCCWVPRKR NSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2952..3109#2559..2851#2266..2459#1416..2159#1..321#atgtctcccgctatgctgcaggcgtcgtcgctgtgcgtatccgcggcgctgtcaggcgccgcgagccggccgggccgcctggccagccaggggcaccagggcaagcgggccgtggcgcagcctctcgcggctagcgccgtgacggaggcagcgccgcccgcgccggtcgtcgcgccgccggcccgccccgtcgacgccccgcggcgccgtggcggacgtggcggcggcggaggcggcggcgagctcgtggcgtggaagagtgtacggcaggagaggtgggagggtgcgctcgaggtggacggagagctgcctctctggctggtgggttaagcctcctactgattgcaaatctccctaaatatgacttgatttggcttttgccttctctccaccctaattaagtattcatgaacacaccataacctcagcattttataagatctgccggtggtcaagctaaggctagccgtgcatttttcattcaagaatgcgaatcttttctgttattttgattcaaaggtttcccagtactccatatcgctttcttgagatcatctataaactaaagatccttttgaacatcttagtaaaaaagcatgcacaacatcttcccacacattgagaaatacgaaaggcactttctggaccacatcactgtgcaacaaatcctttataattaacctaaccattttcatcttgtagcatctccttgattagtgcaggctaaccgctgacctagagcacatatatgcatatagccccagaagggtcctaaaaaggtaccagctttggccacgtacctagcatatttttaccagcagtatctaacacgccagggtatattacttgccgactgtcatttttaatttccactgtgccagcagttgctgaagcactcacccaaatcttcagtaatttgatcgacaaagaggagggcgacactaacttaccctatgctggcctagcgaaaaggagatggcatcttggcactcacgatgcttgcggggaacacaacatatatacccagattctctgctcacccctagcttcgatcggcgacaacaatggcatcactgtcttgtggttgcagttttgttgcaccccgcaactctctgaaaacaaaagtcaaaaaccttggtctcccctaactccaagtgatcttatcactgttcttgccaattttgatagtgacttgatttgaggaattaatacaggtgtacatgtagtataatattgttgtaactttgtagttacactcactaagctatggataatacaatcgtttcagctaattaaaaatgcaatcttctgaggtaagctcgtggatagattaatttgtcggtcgttaattagaggtggacggatttgtcgacgtgctgcaaatgattgatcggatcgatgcatacttgctgcaggatggcacgtacctgaggaacggcccgggactatggaacctcggcgactacggcttccggcacctgttcgacggctacgcgacgctggtgcgcgtctcgttccgcggcggccgcgccgtgggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtgtgctaccgcgagttctcggaggtgcccaagccggacaacttcctgtcctacgtcggccagctggcgaccctcttctcgggctcgtcgctcaccgacaactccaacaccggcgtcgtcatgctcggcgacggccgcgtgctctgcctcacggagaccatcaagggctccatccaggtcgacccggacacgctcgacacggtcggcaagttccagtacacggacaagctgggcgggctgatccactcggcgcacccgatcgtgaccgacaccgagttctggacgctgatccccgacctgatccggcccggctacgtggtggcgaggatggacgccggtagcaacgagaggcagttcgtcggcagggtggactgccgcggcgggccggcgccagggtgggtgcactcgttccccgtcaccgagcactacgtcgtcgtgccggagatgccgctccgctactgcgccaagaacctcctccgcgccgagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtcatgtgcaaggccagcggcaagattgtaagccatcatcaatcgctgccgcccgtagtgcgttcccgttttgcctatttaattggttgggtgatctaatgatgatatttgtcgggacgatggccaaccgaaggtggcgagcgtggaggtgccgccgttcgtgacgttccacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggcgatcatcgccgactgctgcgagcacaacgccaacaccgccatcctcgacaagctccgcctccacaacctccgctcctccagcggccaggacgtcctccccgacgccaggtacgtacacacacgagccacacgacgacgtcccgccgtcaatttgctacgctacgcatgcacgtatgcacgatggatgacggggaacaccatgtgtagggtggggcggttcaggatccccctggacgggagccagttcggcgagctggagacggcgctggacccggaggagcacgggcggggcatggacatgtgcagcatcaacccggcgcacgtcggcagggagtaccggtacgcctacgcctgcggcgcccgccggccgtgcaacttccccaacacgctcaccaaggtcgacctggtggagaggacggccaagaactggcacgaggagggctccgtgccgtccgagcccttcttcgtgccacgccccggcgccaccgaggaagacgacggttagtgtcaccatctctcctcgttggctgcgtatacgtacgtcttggctttgcctcgtttcgtttgtaataacttgaccaactctgttattgatggcaggcgtggcgatatcgatggtgagcgccaaggacgggtcgggctatgcgctggtgctggacggcaagacgttcgaggaggtcgcgcgggccaagttcccgtacgggctgccctacggcttgcactgctgctgggtgcccaggaaaaggaacagcaagtaa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050764.2 RefSeq:Os01g0746400]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 1]]<br /> [[Category:Chromosome 1]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0746400&diff=172367 2014-05-25T12:06:59Z

<p>Younger123456: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> <br /> 　　　D10,carotenoid cleavage dioxygenase 8（OsCCD8）controls lateral bud outgrowth of rice, and then ultimate control of rice tillers. OsCCD8 is an important enzyme of biosynthesis Strigolactones process.It´s involved in the biosynthesis of Strigolactones / Strigolactones derivative SL.　D10 may plays an important role in regulate Strigolactones and its derivatives by auxin , but may reduce the transport ability of auxin and promote the synthesis of cytokinin by reducing the auxin levels at the same time.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> 　　　D10 is a carotenoid cleavage dioxygenase, mainly expressed in vascular cells of various organs, and induced by exogenous auxin.In addition, the expression of D10 up-regulated in 6 mutated branches,including d3,d10,d14,d17,d27,htdi.But MAX2 and MAX3 rice homologous gene D3 and HTD1 have no expression change in these mutants.These finding may indicate that D10's transcription may be key factor of regulating branches inhibition pathway.(Arie et al.,2007)<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> 　　<br /> 　　　D10 is MAX4/RMS1/DAD1 orthologous genes in rice<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> 1 The State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese <br /> Academy of Sciences<br /> 2 College of Biological Sciences and Biotechnology, Beijing Forestry University<br /> 3 Department of Applied Biological Chemistry, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo<br /> 4 RIKEN Plant Science Center, Japan<br /> 5 Research Institute for Bioresources, Okayama University, Kurashiki, Okayama 710-0046, Japan<br /> <br /> ==References==<br /> Please input cited references here.<br /> <br /> 1. Shuying Zhang;Gang Li;Jun Fang;Weiqi Chen;Haipai Jiang;Junhuang Zou;Xue Liu;Xianfeng Zhao;Xiaobing Li;Chengcai Chu;Qi Xie;Xiangning Jiang;Lihuang Zhu<br /> The Interactions among DWARF10, Auxin and Cytokinin Underlie Lateral Bud Outgrowth in Rice.Journal of Integrative Plant Biology, 2010, 52(7): 626-638<br /> <br /> 2. Shinsaku Ito;Nobutaka Kitahata;Mikihisa Umehara;Atsushi Hanada;Atsutaka Kato;Kotomi Ueno;Kiyoshi Mashiguchi;Junko Kyozuka;Koichi Yoneyama;Shinjiro Yamaguchi;Tadao Asami .A New Lead Chemical for Strigolactone Biosynthesis Inhibitors. Plant and Cell Physiology, 2010, 51(7): 1143-1150<br /> <br /> 3. Tomotsugu Arite;Hirotaka Iwata;Kenji Ohshima;Masahiko Maekawa;Masatoshi Nakajima;Mikiko Kojima;Hitoshi Sakakibara and Junko Kyozuka<br /> DWARF10, an RMS1/MAX4/DAD1 ortholog, controls lateral bud outgrowth in rice.The Plant Journal, 2007, 51(6): 1019-1029<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os01g0746400|<br /> Description = Carotenoid oxygenase family protein|<br /> Version = NM_001050764.2 GI:297597605 GeneID:4326177|<br /> Length = 3109 bp|<br /> Definition = Oryza sativa Japonica Group Os01g0746400, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|<br /> AP = Chromosome 1:32981304..32984412|<br /> CDS = 32981304..32981461,32981562..32981854,32981954..32982147,32982254..32982997,32984092..32984412&lt;br&gt;|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008394:32981304..32984412<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008394:32981304..32984412<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgtctcccgctatgctgcaggcgtcgtcgctgtgcgtatccgcggcgctgtcaggcgccgcgagccggccgggccgcctggccagccaggggcaccagggcaagcgggccgtggcgcagcctctcgcggctagcgccgtgacggaggcagcgccgcccgcgccggtcgtcgcgccgccggcccgccccgtcgacgccccgcggcgccgtggcggacgtggcggcggcggaggcggcggcgagctcgtggcgtggaagagtgtacggcaggagaggtgggagggtgcgctcgaggtggacggagagctgcctctctggctggatggcacgtacctgaggaacggcccgggactatggaacctcggcgactacggcttccggcacctgttcgacggctacgcgacgctggtgcgcgtctcgttccgcggcggccgcgccgtgggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtgtgctaccgcgagttctcggaggtgcccaagccggacaacttcctgtcctacgtcggccagctggcgaccctcttctcgggctcgtcgctcaccgacaactccaacaccggcgtcgtcatgctcggcgacggccgcgtgctctgcctcacggagaccatcaagggctccatccaggtcgacccggacacgctcgacacggtcggcaagttccagtacacggacaagctgggcgggctgatccactcggcgcacccgatcgtgaccgacaccgagttctggacgctgatccccgacctgatccggcccggctacgtggtggcgaggatggacgccggtagcaacgagaggcagttcgtcggcagggtggactgccgcggcgggccggcgccagggtgggtgcactcgttccccgtcaccgagcactacgtcgtcgtgccggagatgccgctccgctactgcgccaagaacctcctccgcgccgagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtcatgtgcaaggccagcggcaagattgtggcgagcgtggaggtgccgccgttcgtgacgttccacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggcgatcatcgccgactgctgcgagcacaacgccaacaccgccatcctcgacaagctccgcctccacaacctccgctcctccagcggccaggacgtcctccccgacgccagggtggggcggttcaggatccccctggacgggagccagttcggcgagctggagacggcgctggacccggaggagcacgggcggggcatggacatgtgcagcatcaacccggcgcacgtcggcagggagtaccggtacgcctacgcctgcggcgcccgccggccgtgcaacttccccaacacgctcaccaaggtcgacctggtggagaggacggccaagaactggcacgaggagggctccgtgccgtccgagcccttcttcgtgccacgccccggcgccaccgaggaagacgacggcgtggcgatatcgatggtgagcgccaaggacgggtcgggctatgcgctggtgctggacggcaagacgttcgaggaggtcgcgcgggccaagttcccgtacgggctgccctacggcttgcactgctgctgggtgcccaggaaaaggaacagcaagtaa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MSPAMLQASSLCVSAALSGAASRPGRLASQGHQGKRAVAQPLAA SAVTEAAPPAPVVAPPARPVDAPRRRGGRGGGGGGGELVAWKSVRQERWEGALEVDGE LPLWLDGTYLRNGPGLWNLGDYGFRHLFDGYATLVRVSFRGGRAVGAHRQIESEAYKA ARAHGKVCYREFSEVPKPDNFLSYVGQLATLFSGSSLTDNSNTGVVMLGDGRVLCLTE TIKGSIQVDPDTLDTVGKFQYTDKLGGLIHSAHPIVTDTEFWTLIPDLIRPGYVVARM DAGSNERQFVGRVDCRGGPAPGWVHSFPVTEHYVVVPEMPLRYCAKNLLRAEPTPLYK FEWHLESGSYMHVMCKASGKIVASVEVPPFVTFHFINAYEETDEEGRVTAIIADCCEH NANTAILDKLRLHNLRSSSGQDVLPDARVGRFRIPLDGSQFGELETALDPEEHGRGMD MCSINPAHVGREYRYAYACGARRPCNFPNTLTKVDLVERTAKNWHEEGSVPSEPFFVP RPGATEEDDGVAISMVSAKDGSGYALVLDGKTFEEVARAKFPYGLPYGLHCCWVPRKR NSK&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;2952..3109#2559..2851#2266..2459#1416..2159#1..321#atgtctcccgctatgctgcaggcgtcgtcgctgtgcgtatccgcggcgctgtcaggcgccgcgagccggccgggccgcctggccagccaggggcaccagggcaagcgggccgtggcgcagcctctcgcggctagcgccgtgacggaggcagcgccgcccgcgccggtcgtcgcgccgccggcccgccccgtcgacgccccgcggcgccgtggcggacgtggcggcggcggaggcggcggcgagctcgtggcgtggaagagtgtacggcaggagaggtgggagggtgcgctcgaggtggacggagagctgcctctctggctggtgggttaagcctcctactgattgcaaatctccctaaatatgacttgatttggcttttgccttctctccaccctaattaagtattcatgaacacaccataacctcagcattttataagatctgccggtggtcaagctaaggctagccgtgcatttttcattcaagaatgcgaatcttttctgttattttgattcaaaggtttcccagtactccatatcgctttcttgagatcatctataaactaaagatccttttgaacatcttagtaaaaaagcatgcacaacatcttcccacacattgagaaatacgaaaggcactttctggaccacatcactgtgcaacaaatcctttataattaacctaaccattttcatcttgtagcatctccttgattagtgcaggctaaccgctgacctagagcacatatatgcatatagccccagaagggtcctaaaaaggtaccagctttggccacgtacctagcatatttttaccagcagtatctaacacgccagggtatattacttgccgactgtcatttttaatttccactgtgccagcagttgctgaagcactcacccaaatcttcagtaatttgatcgacaaagaggagggcgacactaacttaccctatgctggcctagcgaaaaggagatggcatcttggcactcacgatgcttgcggggaacacaacatatatacccagattctctgctcacccctagcttcgatcggcgacaacaatggcatcactgtcttgtggttgcagttttgttgcaccccgcaactctctgaaaacaaaagtcaaaaaccttggtctcccctaactccaagtgatcttatcactgttcttgccaattttgatagtgacttgatttgaggaattaatacaggtgtacatgtagtataatattgttgtaactttgtagttacactcactaagctatggataatacaatcgtttcagctaattaaaaatgcaatcttctgaggtaagctcgtggatagattaatttgtcggtcgttaattagaggtggacggatttgtcgacgtgctgcaaatgattgatcggatcgatgcatacttgctgcaggatggcacgtacctgaggaacggcccgggactatggaacctcggcgactacggcttccggcacctgttcgacggctacgcgacgctggtgcgcgtctcgttccgcggcggccgcgccgtgggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtgtgctaccgcgagttctcggaggtgcccaagccggacaacttcctgtcctacgtcggccagctggcgaccctcttctcgggctcgtcgctcaccgacaactccaacaccggcgtcgtcatgctcggcgacggccgcgtgctctgcctcacggagaccatcaagggctccatccaggtcgacccggacacgctcgacacggtcggcaagttccagtacacggacaagctgggcgggctgatccactcggcgcacccgatcgtgaccgacaccgagttctggacgctgatccccgacctgatccggcccggctacgtggtggcgaggatggacgccggtagcaacgagaggcagttcgtcggcagggtggactgccgcggcgggccggcgccagggtgggtgcactcgttccccgtcaccgagcactacgtcgtcgtgccggagatgccgctccgctactgcgccaagaacctcctccgcgccgagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtcatgtgcaaggccagcggcaagattgtaagccatcatcaatcgctgccgcccgtagtgcgttcccgttttgcctatttaattggttgggtgatctaatgatgatatttgtcgggacgatggccaaccgaaggtggcgagcgtggaggtgccgccgttcgtgacgttccacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggcgatcatcgccgactgctgcgagcacaacgccaacaccgccatcctcgacaagctccgcctccacaacctccgctcctccagcggccaggacgtcctccccgacgccaggtacgtacacacacgagccacacgacgacgtcccgccgtcaatttgctacgctacgcatgcacgtatgcacgatggatgacggggaacaccatgtgtagggtggggcggttcaggatccccctggacgggagccagttcggcgagctggagacggcgctggacccggaggagcacgggcggggcatggacatgtgcagcatcaacccggcgcacgtcggcagggagtaccggtacgcctacgcctgcggcgcccgccggccgtgcaacttccccaacacgctcaccaaggtcgacctggtggagaggacggccaagaactggcacgaggagggctccgtgccgtccgagcccttcttcgtgccacgccccggcgccaccgaggaagacgacggttagtgtcaccatctctcctcgttggctgcgtatacgtacgtcttggctttgcctcgtttcgtttgtaataacttgaccaactctgttattgatggcaggcgtggcgatatcgatggtgagcgccaaggacgggtcgggctatgcgctggtgctggacggcaagacgttcgaggaggtcgcgcgggccaagttcccgtacgggctgccctacggcttgcactgctgctgggtgcccaggaaaaggaacagcaagtaa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050764.2 RefSeq:Os01g0746400]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 1]]<br /> [[Category:Chromosome 1]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0177400&diff=172365 2014-05-25T11:48:53Z

<p>Younger123456: /* Annotated Information */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> Please input function information here.<br /> D18 CDS 1113 bp, contains three exons, encoding a 370 amino acid composition of protein products.<br /> Phytochrome in the regulation of rice section elongation of different levels, such as regulating OsGA3ox2 GA biosynthesis gene expression, the expression of ACO1 section and the elongation of the initial (Iwamoto et al. 2011)<br /> Gibberellin 3 beta hydroxylase activity (0016707) GO:<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Rice genome library makes use of degenerate primers PCR amplification, filter and cloned into two gibberellin 3 beta OsGA3ox1 and OsGA3ox2 hydroxylase gene.The authors use the GC - MS full range scan and Kovats retention index to test the function of the recombinant fusion protein.Two proteins in GA20 to GA1, GA5 to GA3 and GA44 to GA38 and GA9 to GA4 show hydroxylase activity.In addition, the indirect evidence also suggests that proteins in catalytic GA9 OsGA3ox1 to 2, 3 - dehydro - GA9, GA20 to GA5 (2, 3 - dehydro - GA20) have 2, 3 dehydrogenase activity, in the process of the catalytic GA1 to GA8, GA4 to GA34 plays in the process of 2 beta hydroxylase activity.Molecules and linkage analysis showed that OsGA3ox1 located in chromosome 5 short arm distal, OsGA3ox2 located in chromosome 1 short arm distal D18 seat.OsGA3ox2 and verified by complementary experiments, the correlation of d18 by OsGA3ox2 complementary d18 - AD alleles, gm strains showed normal phenotype.The two genes are characterized by brief expression, including OsGA3ox1 expressed in unopened flower, highest OsGA3ox2 expressed in elongation of blade top (Itoh et al., 2001)<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> ===Extension=== <br /> Its number Genebank is AB056519 , and a 1122 bp mRNA .<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> 1. Makoto Matsuoka<br /> personal home page：http://www.bio.nagoya-u.ac.jp/gcoe/english/member/matsuoka.html<br /> 2. Makoto Takano<br /> personal home page：http://www.pimco.com/EN/experts/pages/makototakano.aspx<br /> <br /> ==References==<br /> Please input cited references here.<br /> 1. Masao Iwamoto;Seiichiro Kiyota;Atsushi Hanada;Shinjiro Yamaguchi;Makoto Takano<br /> The Multiple Contributions of Phytochromes to the Control of Internode Elongation in Rice<br /> Plant Physiology, 2011, 157(3): 1187-1195<br /> 2. Hironori Itoh;Miyako Ueguchi-Tanaka;Naoki Sentoku;Hidemi Kitano;Makoto Matsuoka;and Masatomo Kobayashi<br /> Cloning and functional analysis of two gibberellin 3β-hydroxylase genes that are differently expressed during the growth of rice<br /> Proceedings of the National Academy of Sciences, 2001, 98(15): 8909-8914<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os01g0177400|<br /> Description = GA 3beta-hydroxylase|<br /> Version = NM_001048721.1 GI:115434855 GeneID:4323864|<br /> Length = 1229 bp|<br /> Definition = Oryza sativa Japonica Group Os01g0177400, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|<br /> AP = Chromosome 1:4002659..4003887|<br /> CDS = 4002659..4003307,4003415..4003697,4003707..4003887|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008394:4002659..4003887<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008394:4002659..4003887<br /> source=RiceChromosome01<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atgccgacgccgtcgcacttgaagaacccgctctgcttcgacttccgggcggcgaggcgggtgccggagacgcacgcgtggccggggctggacgaccacccggtggtggacggcggcggcggcggcggcgaggacgcggtgccggtggtggacgtcggggcgggcgacgcggcggcgcgggcggcggagcagtggggcgcgttccttctggtcgggcacggcgtgccggcggcgctgctgtcgcgcgtcgaggagcgcgtcgcccgcgtgttctccctgccggcgtcggagaagatgcgcgccgtccgcggccccggcgagccctgcggctacggctcgccgcccatctcctccttcttctccaagctcatgtggtccgagggctacaccttctccccttcctccctccgctccgagctccgccgcctctggcccaagtccggcgacgactacctcctcttctgtgacgtgatggaggagtttcacaaggagatgcggcggctagccgacgagttgctgaggttgttcttgagggcgctggggctcaccggcgaggaggtcgccggagtcgaggcggagaggaggatcggcgagaggatgacggcgacggtgcacctcaactggtacccgaggtgcccggagccgcggcgagcgctggggctcatcgcgcacacggactcgggcttcttcaccttcgtgctccagagcctcgtcccggggctgcagctgttccgtcgagggcccgaccggtgggtggcggtgccggcggtggcgggggccttcgtcgtcaacgtcggcgacctcttccacatcctcaccaacggccgcttccacagcgtctaccaccgcgccgtcgtgaaccgcgaccgcgaccgggtctcgctcggctacttcctcggcccgccgccggacgccgaggtggcgccgctgccggaggccgtgccggccggccggagccccgcctaccgcgctgtcacgtggccggagtacatggccgtccgcaagaaggccttcgccaccggcggctccgccctcaagatggtctccaccgacgccgccgccgccgccgacgaacacgacgacgtcgccgccgccgccgacgtccacgcataa&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MPTPSHLKNPLCFDFRAARRVPETHAWPGLDDHPVVDGGGGGGE DAVPVVDVGAGDAAARAAEQWGAFLLVGHGVPAALLSRVEERVARVFSLPASEKMRAV RGPGEPCGYGSPPISSFFSKLMWSEGYTFSPSSLRSELRRLWPKSGDDYLLFCDVMEE FHKEMRRLADELLRLFLRALGLTGEEVAGVEAERRIGERMTATVHLNWYPRCPEPRRA LGLIAHTDSGFFTFVLQSLVPGLQLFRRGPDRWVAVPAVAGAFVVNVGDLFHILTNGR FHSVYHRAVVNRDRDRVSLGYFLGPPPDAEVAPLPEAVPAGRSPAYRAVTWPEYMAVR KKAFATGGSALKMVSTDAAAAADEHDDVAAAADVHA&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;581..1229#191..473#1..181#atgccgacgccgtcgcacttgaagaacccgctctgcttcgacttccgggcggcgaggcgggtgccggagacgcacgcgtggccggggctggacgaccacccggtggtggacggcggcggcggcggcggcgaggacgcggtgccggtggtggacgtcggggcgggcgacgcggcggcgcgggtggcgcgggcggcggagcagtggggcgcgttccttctggtcgggcacggcgtgccggcggcgctgctgtcgcgcgtcgaggagcgcgtcgcccgcgtgttctccctgccggcgtcggagaagatgcgcgccgtccgcggccccggcgagccctgcggctacggctcgccgcccatctcctccttcttctccaagctcatgtggtccgagggctacaccttctccccttcctccctccgctccgagctccgccgcctctggcccaagtccggcgacgactacctcctcttctggtatatatacatatatactctcccatgcattccatgcacatacactctacgtatatatctacctctacgtatatatctacgtattgatctacgtataatatacgcagtgacgtgatggaggagtttcacaaggagatgcggcggctagccgacgagttgctgaggttgttcttgagggcgctggggctcaccggcgaggaggtcgccggagtcgaggcggagaggaggatcggcgagaggatgacggcgacggtgcacctcaactggtacccgaggtgcccggagccgcggcgagcgctggggctcatcgcgcacacggactcgggcttcttcaccttcgtgctccagagcctcgtcccggggctgcagctgttccgtcgagggcccgaccggtgggtggcggtgccggcggtggcgggggccttcgtcgtcaacgtcggcgacctcttccacatcctcaccaacggccgcttccacagcgtctaccaccgcgccgtcgtgaaccgcgaccgcgaccgggtctcgctcggctacttcctcggcccgccgccggacgccgaggtggcgccgctgccggaggccgtgccggccggccggagccccgcctaccgcgctgtcacgtggccggagtacatggccgtccgcaagaaggccttcgccaccggcggctccgccctcaagatggtctccaccgacgccgccgccgccgccgacgaacacgacgacgtcgccgccgccgccgacgtccacgcataa&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048721.1 RefSeq:Os01g0177400]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 1]]<br /> [[Category:Chromosome 1]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=172362 2014-05-25T11:36:59Z

<p>Younger123456: /* Evolution */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> D35 is owing to 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine. Also ,it has high homologous with arabidopsis and pumpkin.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=172361 2014-05-25T11:31:27Z

<p>Younger123456: /* Expression */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> Isolating from rice genome with 5 KO-like genes,they encode proteins that have high homologous with arabidopsis and pumkin KOs.Expression analysis shows that OsKO2 and OsKO4 have high transcription in different organs,while OsKO1 and OsKO5 have low expression and OsKOL3 maybe a pseudogene.Corresponding to OsKO2,D35 locates in the rice long arm of chromosome 6,linkaged with C214 marker.Gene OsKo2 gene is 8262kb,including 8 exons and 7 introns.D35 is owing of 5 exon 's mononucleotide A change into T,resulting the coding of arginine changed into serine.d35Tan-Ginbozu is just a kind of weak alleles of D35.And lacking of D35 may lead to dwarf seriously.Moreover ,OsKO4 and OsKO5 may consist of systhesizing phytoalexin.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

Younger123456 https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0570100&diff=172360 2014-05-25T11:11:39Z

<p>Younger123456: /* Function */</p> <hr /> <div>Please input one-sentence summary here.<br /> <br /> ==Annotated Information==<br /> ===Function===<br /> A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s.<br /> the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO).<br /> Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35.<br /> Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.<br /> <br /> ===Expression===<br /> Please input expression information here.<br /> <br /> ===Evolution===<br /> Please input evolution information here.<br /> <br /> You can also add sub-section(s) at will.<br /> <br /> ==Labs working on this gene==<br /> Please input related labs here.<br /> <br /> ==References==<br /> <br /> 1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945<br /> <br /> 2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547<br /> <br /> 3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888<br /> <br /> ==Structured Information==<br /> {{JaponicaGene|<br /> GeneName = Os06g0570100|<br /> Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)|<br /> Version = NM_001064444.1 GI:115468619 GeneID:4341347|<br /> Length = 8510 bp|<br /> Definition = Oryza sativa Japonica Group Os06g0570100, complete gene.|<br /> Source = Oryza sativa Japonica Group<br /> <br /> ORGANISM Oryza sativa Japonica Group<br /> Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;<br /> Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP<br /> clade; Ehrhartoideae; Oryzeae; Oryza.<br /> |<br /> Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|<br /> AP = Chromosome 6:22950979..22959488|<br /> CDS = 22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072&lt;br&gt;,22953227..22953388,22953483..22953643,22959275..22959401|<br /> GCID = &lt;gbrowseImage1&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage1&gt;|<br /> GSID = &lt;gbrowseImage2&gt;<br /> name=NC_008399:22950979..22959488<br /> source=RiceChromosome06<br /> preset=GeneLocation<br /> &lt;/gbrowseImage2&gt;|<br /> CDNA = &lt;cdnaseq&gt;atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga&lt;/cdnaseq&gt;|<br /> AA = &lt;aaseq&gt;MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM&lt;/aaseq&gt;|<br /> DNA = &lt;dnaseqindica&gt;8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat&lt;/dnaseqindica&gt;|<br /> Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064444.1 RefSeq:Os06g0570100]|<br /> }}<br /> [[Category:Genes]]<br /> [[Category:Japonica mRNA]]<br /> [[Category:Oryza Sativa Japonica Group]]<br /> [[Category:Japonica Genes]]<br /> [[Category:Japonica Chromosome 6]]<br /> [[Category:Chromosome 6]]</div>

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