Atp1 - Revision history

192.168.72.52 at 05:33, 15 May 2015

2015-05-15T05:33:49Z

Liuxianju: /* References */

2014-06-07T07:11:03Z

‎References

Liuxianju: /* Expression */

2014-06-07T07:10:44Z

‎Expression

Liuxianju: /* Expression */

2014-06-07T07:03:27Z

‎Expression

Liuxianju: /* Expression */

2014-06-07T07:00:49Z

‎Expression

Hailin Li at 02:43, 6 June 2014

2014-06-06T02:43:38Z

Hailin Li at 02:42, 6 June 2014

2014-06-06T02:42:23Z

Guo Xiaojia at 09:30, 4 June 2014

2014-06-04T09:30:31Z

ZlyNo.1 at 12:03, 24 May 2014

2014-05-24T12:03:40Z

ZlyNo.1 at 11:39, 20 May 2014

2014-05-20T11:39:00Z

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 ===Expression===
 Please input expression information here.
 ===Evolution===
 Please input evolution information here.
 You can also add sub-section(s) at will.
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 ==References==
 Please input cited references here.
 ==Structured Information==
-{{Mitochondrion|
+     [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Mitochondrion]]

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 ==References==
 Please input cited references here.
 ==Structured Information==

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 Please input expression information here.
   rice mitochondria
-the transcription of riceatp1starts from at least eight positions,
+the transcription of riceatp1starts from at least eight positions, as follows:!678 (h),!470 (g),!441 (f),!438 (e),
 ===Evolution===

@@ Line 8: / Line 8: @@
 Please input expression information here.
   rice mitochondria
 ===Evolution===

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 ===Expression===
 Please input expression information here.
 ===Evolution===

← Older revision		Revision as of 02:42, 6 June 2014
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
	{{Mitochondrion\|		{{Mitochondrion\|
	GeneName = atp1\|		GeneName = atp1\|

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 GeneName = atp1|
 Annotated Information = protein coding; the gene of protein Atp1(ATP synthase F0 subunit 1).|
-Function = Involved in the synthesis of ATP|
+Function = Involved in the synthesis of ATP|This is one of the mitochondrial-encoded genes, which encodes one of the ATP sythases of the respiratory chain.Encode the αsubunit of F1.
-Expression = In the rice atp1 gene, multiple transcripts were observed at some regions of initiation of transcription by primer extension analysis. There were at least eight transcription initiation sites upstream of atp1. Rice atp1 is present in a unique environment and is transcribed at a high level.  The multiple initiation sites of the
+Expression = With the in vitro capping method, ribonuclease protection experiments and from primer extension analysis, it has been prove that rice atp1 is transcribed from multiple initiation sites.Further experiments prove that there are at least eight transcription initiation sites of the rice mitochondrial atp1 gene. This only exist in rice atp1 gene, which are different from other plant species, such as wheat , maize and ''Oenothera''. Rice atp1 is present in a unique environment and is transcribed at a high level.  The multiple initiation sites of the rice mitochondrial atp1 gene is also regulated in different ways.|
-rice mitochondrial atp1 gene is also regulated in different ways.|
+Evolution = R1c might have evolved from R1b through elimination of its partial segments at the end containing the atp1 gene, which was integrated in the soybean genome at another location.The mitochondrial DNA is more conservative and the evolution rate of chloroplast DNA is higher than mitochondrial DNA in rice.|During the evolution peocess, the majarity of the mitochondria genetics content were transferred into the nucleus of the cell.Mitochondrial biogenesis today relies on the coordinated regulation of both the nuclear genomes and the mitochondrial genomes. So the expression of rice atp1 now is influence by bothe the nuclear genomes and the mitochondrial genomes.
-Evolution = R1c might have evolved from R1b through elimination of its partial segments at the end containing the atp1 gene, which was integrated in the soybean genome at another location.The mitochondrial DNA is more conservative and the evolution rate of chloroplast DNA is higher than mitochondrial DNA in rice.|
+Labs wodking on this gene = Laboratory of Plant Molecular Genetics; Key Laboratory of Crop Heterosis and Utilization of Ministry of Education; Beijing Key Laboratory of Crop Genetic Improvement; Key Laboratory of MOE for Plant Developmental Biology; State Key Laboratory of Pharmaceutical Biotechnology; Key Laboratory of Tea Biochemistry and Biotechnology; MOE Key Laboratory of Bioinformatics and Bioinformatics Div. TNLIST.|Laboratory of Radiation Genetics, Faculty of Agriculture, The University
-Labs wodking on this gene = Laboratory of Plant Molecular Genetics; Key Laboratory of Crop Heterosis and Utilization of Ministry of Education; Beijing Key Laboratory of Crop Genetic Improvement; Key Laboratory of MOE for Plant Developmental Biology; State Key Laboratory of Pharmaceutical Biotechnology; Key Laboratory of Tea Biochemistry and Biotechnology; MOE Key Laboratory of Bioinformatics and Bioinformatics Div. TNLIST.|
+of Tokyo. Laboratory of Plant Breeding, Faculty of Agriculture, The University
 References = Notsu Y, Masood S, Nishikawa T, et al. The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants[J]. Molecular Genetics and Genomics, 2002, 268(4): 434-445.
               Wei X, Wang R, Cao L, et al. Origin of Oryza sativa in China inferred by nucleotide polymorphisms of organelle DNA[J]. PloS one, 2012, 7(11): e49546.
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               Chen X, Wang Y, Li J, et al. Mitochondrial proteome during salt stress-induced programmed cell death in rice[J]. Plant Physiology and Biochemistry, 2009, 47(5): 407-415.
               Lei B, Li S, Liu G, et al. Evolution of mitochondrial gene content: loss of genes, tRNAs and introns between Gossypium harknessii and other plants[J]. Plant Systematics and Evolution, 2013, 299(10): 1889-1897.|
 Structured information = The product of the gene is the subunit of the ATP synthase F0(ATP synthase F0 subunit 1)