BGIOSGA033504 - Revision history

Xysj2027: Blanked the page

2017-05-06T16:08:32Z

Blanked the page

Huanghs at 08:43, 3 June 2014

2014-06-03T08:43:48Z

Huanghs at 08:43, 3 June 2014

2014-06-03T08:43:32Z

Huanghs at 08:43, 3 June 2014

2014-06-03T08:43:07Z

Huanghs: /* Labs working on this gene */

2014-06-03T08:42:23Z

‎Labs working on this gene

Huanghs: /* References */

2014-06-02T15:10:43Z

‎References

Wangll at 11:04, 2 June 2014

2014-06-02T11:04:02Z

124.16.129.48 at 17:38, 22 July 2012

2012-07-22T17:38:55Z

127.0.0.1: Created page with "{{IndicaGene| GeneName = BGIOSGA033504| Description = Csld4-cellulose synthase-like family d| Definition = Oryza sativa Indica Group BGIOSGA033504, complete gene.| tag = O..."

2012-06-26T04:27:01Z

Created page with "{{IndicaGene| GeneName = BGIOSGA033504| Description = Csld4-cellulose synthase-like family d| Definition = Oryza sativa Indica Group BGIOSGA033504, complete gene.| tag = O..."

New page

{{IndicaGene|
GeneName = BGIOSGA033504|
Description = Csld4-cellulose synthase-like family d|
Definition = Oryza sativa Indica Group BGIOSGA033504, complete gene.|
tag = OSJNBA0056G17.16|
tid = BGIOSGA033504-TA|
pid = BGIOSGA033504-PA|
Length = 3474|
Source = Oryza sativa Indica Group

ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Indica Chromosome 10|Chromosome 10]]|
AP = Chromosome 10:22128267..22131740|
CDS = 22128267..22130942,22131033..22131740|
GCID = <gbrowseImage1>
name=IndicaChromosome10:22128267..22131740
source=RiceIndica10
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=IndicaChromosome10:22128267..22131740
source=RiceIndica10
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>ATGGCGTCGAAGGGCATCCTCAAGAACGGCGGTAAGCCGCCGACGGCGCCATCGTCGGCGGCGCCCACGGTGGTGTTCGGTCGGCGGACGGACTCGGGGCGATTCATCAGCTACTCCCGCGACGACCTTGACTCGGAGATCAGCAGCGTGGACTTCCAGGACTACCACGTCCACATCCCCATGACGCCGGACAACCAGCCCATGGACCCTGCCGCCGGCGACGAGCAGCAGTACGTGTCCAGCTCGCTCTTCACCGGCGGGTTCAACAGCGTGACACGCGCGCACGTGATGGAGAAGCAGGCGTCGTCGGCGAGGGCGACGGTGTCGGCGTGCATGGTGCAGGGGTGCGGGTCCAAGATCATGCGCAACGGGCGCGGCGCCGACATCCTCCCCTGCGAGTGCGACTTCAAGATCTGCGTGGACTGCTTCACCGACGCCGTCAAGGGCGGCGGCGGCGTGTGCCCGGGGTGCAAGGAGCCGTACAAGCACGCGGAGTGGGAGGAGGTGGTGTCGGCGTCCAACCACGACGCCATCAACAGGGCGCTGTCGCTGCCGCACGGGCACGGGCATGGCCCCAAGATGGAGAGGCGGCTGTCGCTGGTGAAGCAGAACGGGGGGGCGCCCGGCGAGTTCGACCACAACCGCTGGCTCTTCGAGACCAAGGGCACCTACGGCTACGGCAACGCAATCTGGCCCGAGGACGACGGCGTGGCGGGGCACCCCAAGGAGCTGATGAGCAAGCCATGGCGGCCGCTGACCCGCAAGCTCCGGATCCAGGCGGCGGTGATCAGCCCGTACAGGCTGCTGGTCCTGATCCGGCTGGTGGCGCTGGGGTTGTTCCTGATGTGGCGCATCAAGCACCAGAACGAGGACGCCATCTGGCTGTGGGGGATGTCCATCGTGTGCGAGCTGTGGTTCGCCTTGTCGTGGGTGCTGGACCAGCTGCCCAAGCTGTGCCCCATCAACCGCGCCACCGACCTGAGCGTGCTCAAGGACAAGTTCGAGACGCCCACGCCGAGCAACCCCACCGGCAAGTCCGACCTCCCCGGGATCGACATCTTCGTCTCCACCGCCGACCCGGAGAAGGAGCCCGTGCTGGTGACGGCCAACACCATCCTCTCCATCCTGGCCGCCGACTACCCCGTCGACAAGCTGGCGTGCTACGTGTCCGACGACGGCGGGGCGCTGCTGACGTTCGAGGCCATGGCGGAGGCGGCGAGCTTCGCCAACCTGTGGGTGCCATTCTGCCGGAAGCACGAGATCGAGCCGAGGAACCCCGACAGCTACTTCAACCTCAAGAGGGACCCGTTCAAGAACAAGGTGAAGGGCGACTTCGTCAAGGACAGGCGGCGGGTGAAGCGGGAGTACGACGAGTTCAAGGTCCGCGTCAATGGCCTCCCCGACGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGCGAGGAGATCCAGGCCATGAACCTGCAGCGGGAGAAGATGAAGGCCGGCGGCGACGAGCAGCAGCTGGAGCCGATAAAGATCCCCAAGGCGACGTGGATGGCGGACGGCACGCACTGGCCGGGGACGTGGCTGCAGGCGTCGCCGGAGCACGCGAGGGGCGACCACGCGGGGATCATACAGGTGATGCTAAAGCCTCCCAGTCCCAGTCCCAGCAGCAGCGGCGGCGACATGGAAAAGAGGGTGGATTTGTCGGGCGTGGACACCCGGCTGCCGATGCTGGTGTACGTGTCGCGGGAGAAGCGGCCGGGGTACGACCACAACAAGAAGGCGGGCGCCATGAACGCGCTGGTGCGGGCGTCGGCGATCATGTCCAACGGGCCGTTCATCCTCAACCTGGACTGCGACCACTACGTGTACAACTCCAAGGCGTTCCGGGAGGGGATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGCTACGTCCAGTTCCCGCAGCGCTTCGAGGGCATCGACCCCTCCGACCGCTACGCCAACCACAACACCGTCTTCTTCGACGTCAACATGCGCGCCCTCGACGGCCTCCAGGGCCCCGTCTATGTCGGAACTGGCTGCCTCTTCCGCCGCATCGCGCTCTACGGCTTCGACCCGCCCAGGTCCAAGGACCACACCACCCCGTGGTCCTGCTGCCTGCCACGTCGCCGCCGAACAAGATCCCAGCCCCAGCCCCAGGAGGAGGAGGAGGAGACGATGGCCCTCCGCATGGACATGGACGGCGCGATGAACATGGCGAGCTTCCCCAAGAAGTTCGGCAACTCGAGCTTCCTGATCGACTCCATCCCGGTGGCGGAGTTCCAGGGACGGCCGCTGGCGGACCACCCGTCGGTGAAGAACGGGCGGCCGCCGGGGGCGCTGACGATCCCGCGGGAGACGCTGGACGCGTCGATCGTGGCGGAGGCGATCAGCGTGGTGTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGACGAGGGTGGGTTGGATATACGGGTCGGTGACGGAGGACGTGGTCACCGGCTACCGCATGCACAACCGGGGGTGGAAGTCCGTCTACTGCGTCACCCACCGCGACGCCTTCCGCGGCACCGCCCCCATCAACCTCACCGACCGCCTCCACCAGGTCCTCCGATGGGCCACTGGCTCCGTCGAGATCTTCTTCTCACGCAACAACGCACTCTTCGCTTCCTCAAAGATGAAGGTTCTCCAGCGCATCGCTTACCTCAACGTTGGCATCTACCCCTTCACCTCCGTCTTCCTCATCGTCTACTGCTTCCTCCCGGCGCTCTCCCTCTTCTCGGGGCAGTTCATCGTGCAGACGCTCAACGTCACCTTCCTCACCTACCTGCTCATCATCACCATCACGCTCTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCCGGCATCGCGCTGGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGCGGAACCAGCGCCCACCTCGCCGCCGTCCTGCAGGGCCTTCTCAAGGTCATCGCCGGCATCGAGATCTCCTTCACCCTCACCTCCAAGCAGCTCGGCGACGACGTCGACGACGAGTTCGCCGAGCTCTACGCGGTCAAGTGGACGTCCCTCATGATACCGCCGCTCACCATCATAATGATCAACCTCGTCGCCATCGCCGTCGGCTTCAGCCGCACCATCTACAGCACCATCCCGCAGTGGAGCAAGCTTCTCGGTGGAGTCTTCTTCAGCTTCTGGGTCCTCGCGCATCTCTACCCCTTCGCCAAGGGCCTCATGGGCAGGAGGGGAAGGACACCCACCATCGTCTACGTCTGGTCTGGCCTCGTCGCCATCACCATCTCCTTGCTCTGGATTGCAATCAAGCCTCCTTCTGCACAAGCCAACTCACAGCTAGGAGGATCCTTCTCTTTCCCCTGA</cdnaseq>|
AA = <aaseq>MASKGILKNGGKPPTAPSSAAPTVVFGRRTDSGRFISYSRDDLDSEISSVDFQDYHVHIPMTPDNQPMDPAAGDEQQYVSSSLFTGGFNSVTRAHVMEKQASSARATVSACMVQGCGSKIMRNGRGADILPCECDFKICVDCFTDAVKGGGGVCPGCKEPYKHAEWEEVVSASNHDAINRALSLPHGHGHGPKMERRLSLVKQNGGAPGEFDHNRWLFETKGTYGYGNAIWPEDDGVAGHPKELMSKPWRPLTRKLRIQAAVISPYRLLVLIRLVALGLFLMWRIKHQNEDAIWLWGMSIVCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQREKMKAGGDEQQLEPIKIPKATWMADGTHWPGTWLQASPEHARGDHAGIIQVMLKPPSPSPSSSGGDMEKRVDLSGVDTRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKAFREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKDHTTPWSCCLPRRRRTRSQPQPQEEEEETMALRMDMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKPPSAQANSQLGGSFSFP</aaseq>|
DNA = <dnaseqindica>1..2676#2767..3474#ATGGCGTCGAAGGGCATCCTCAAGAACGGCGGTAAGCCGCCGACGGCGCCATCGTCGGCGGCGCCCACGGTGGTGTTCGGTCGGCGGACGGACTCGGGGCGATTCATCAGCTACTCCCGCGACGACCTTGACTCGGAGATCAGCAGCGTGGACTTCCAGGACTACCACGTCCACATCCCCATGACGCCGGACAACCAGCCCATGGACCCTGCCGCCGGCGACGAGCAGCAGTACGTGTCCAGCTCGCTCTTCACCGGCGGGTTCAACAGCGTGACACGCGCGCACGTGATGGAGAAGCAGGCGTCGTCGGCGAGGGCGACGGTGTCGGCGTGCATGGTGCAGGGGTGCGGGTCCAAGATCATGCGCAACGGGCGCGGCGCCGACATCCTCCCCTGCGAGTGCGACTTCAAGATCTGCGTGGACTGCTTCACCGACGCCGTCAAGGGCGGCGGCGGCGTGTGCCCGGGGTGCAAGGAGCCGTACAAGCACGCGGAGTGGGAGGAGGTGGTGTCGGCGTCCAACCACGACGCCATCAACAGGGCGCTGTCGCTGCCGCACGGGCACGGGCATGGCCCCAAGATGGAGAGGCGGCTGTCGCTGGTGAAGCAGAACGGGGGGGCGCCCGGCGAGTTCGACCACAACCGCTGGCTCTTCGAGACCAAGGGCACCTACGGCTACGGCAACGCAATCTGGCCCGAGGACGACGGCGTGGCGGGGCACCCCAAGGAGCTGATGAGCAAGCCATGGCGGCCGCTGACCCGCAAGCTCCGGATCCAGGCGGCGGTGATCAGCCCGTACAGGCTGCTGGTCCTGATCCGGCTGGTGGCGCTGGGGTTGTTCCTGATGTGGCGCATCAAGCACCAGAACGAGGACGCCATCTGGCTGTGGGGGATGTCCATCGTGTGCGAGCTGTGGTTCGCCTTGTCGTGGGTGCTGGACCAGCTGCCCAAGCTGTGCCCCATCAACCGCGCCACCGACCTGAGCGTGCTCAAGGACAAGTTCGAGACGCCCACGCCGAGCAACCCCACCGGCAAGTCCGACCTCCCCGGGATCGACATCTTCGTCTCCACCGCCGACCCGGAGAAGGAGCCCGTGCTGGTGACGGCCAACACCATCCTCTCCATCCTGGCCGCCGACTACCCCGTCGACAAGCTGGCGTGCTACGTGTCCGACGACGGCGGGGCGCTGCTGACGTTCGAGGCCATGGCGGAGGCGGCGAGCTTCGCCAACCTGTGGGTGCCATTCTGCCGGAAGCACGAGATCGAGCCGAGGAACCCCGACAGCTACTTCAACCTCAAGAGGGACCCGTTCAAGAACAAGGTGAAGGGCGACTTCGTCAAGGACAGGCGGCGGGTGAAGCGGGAGTACGACGAGTTCAAGGTCCGCGTCAATGGCCTCCCCGACGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGCGAGGAGATCCAGGCCATGAACCTGCAGCGGGAGAAGATGAAGGCCGGCGGCGACGAGCAGCAGCTGGAGCCGATAAAGATCCCCAAGGCGACGTGGATGGCGGACGGCACGCACTGGCCGGGGACGTGGCTGCAGGCGTCGCCGGAGCACGCGAGGGGCGACCACGCGGGGATCATACAGGTGATGCTAAAGCCTCCCAGTCCCAGTCCCAGCAGCAGCGGCGGCGACATGGAAAAGAGGGTGGATTTGTCGGGCGTGGACACCCGGCTGCCGATGCTGGTGTACGTGTCGCGGGAGAAGCGGCCGGGGTACGACCACAACAAGAAGGCGGGCGCCATGAACGCGCTGGTGCGGGCGTCGGCGATCATGTCCAACGGGCCGTTCATCCTCAACCTGGACTGCGACCACTACGTGTACAACTCCAAGGCGTTCCGGGAGGGGATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGCTACGTCCAGTTCCCGCAGCGCTTCGAGGGCATCGACCCCTCCGACCGCTACGCCAACCACAACACCGTCTTCTTCGACGTCAACATGCGCGCCCTCGACGGCCTCCAGGGCCCCGTCTATGTCGGAACTGGCTGCCTCTTCCGCCGCATCGCGCTCTACGGCTTCGACCCGCCCAGGTCCAAGGACCACACCACCCCGTGGTCCTGCTGCCTGCCACGTCGCCGCCGAACAAGATCCCAGCCCCAGCCCCAGGAGGAGGAGGAGGAGACGATGGCCCTCCGCATGGACATGGACGGCGCGATGAACATGGCGAGCTTCCCCAAGAAGTTCGGCAACTCGAGCTTCCTGATCGACTCCATCCCGGTGGCGGAGTTCCAGGGACGGCCGCTGGCGGACCACCCGTCGGTGAAGAACGGGCGGCCGCCGGGGGCGCTGACGATCCCGCGGGAGACGCTGGACGCGTCGATCGTGGCGGAGGCGATCAGCGTGGTGTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGACGAGGGTGGGTTGGATATACGGGTCGGTGACGGAGGACGTGGTCACCGGCTACCGCATGCACAACCGGGGGTGGAAGTCCGTCTACTGCGTCACCCACCGCGACGCCTTCCGCGGCACCGCCCCCATCAACCTCACCGACCGCCTCCACCAGGTCCTCCGATGGGCCACTGGCTCCGTCGAGATCTTCTTCTCACGCAACAACGCACTCTTCGCTTCCTCAAAGATGAAGGTGCCTAGCTTGCTATTCGATCGATTATTTTTCTTCTTCTTCTTCTTCTTCCGCTGCCGCCAAACAAACAATTATCCATTGCATTTGCAGGTTCTCCAGCGCATCGCTTACCTCAACGTTGGCATCTACCCCTTCACCTCCGTCTTCCTCATCGTCTACTGCTTCCTCCCGGCGCTCTCCCTCTTCTCGGGGCAGTTCATCGTGCAGACGCTCAACGTCACCTTCCTCACCTACCTGCTCATCATCACCATCACGCTCTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCCGGCATCGCGCTGGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGCGGAACCAGCGCCCACCTCGCCGCCGTCCTGCAGGGCCTTCTCAAGGTCATCGCCGGCATCGAGATCTCCTTCACCCTCACCTCCAAGCAGCTCGGCGACGACGTCGACGACGAGTTCGCCGAGCTCTACGCGGTCAAGTGGACGTCCCTCATGATACCGCCGCTCACCATCATAATGATCAACCTCGTCGCCATCGCCGTCGGCTTCAGCCGCACCATCTACAGCACCATCCCGCAGTGGAGCAAGCTTCTCGGTGGAGTCTTCTTCAGCTTCTGGGTCCTCGCGCATCTCTACCCCTTCGCCAAGGGCCTCATGGGCAGGAGGGGAAGGACACCCACCATCGTCTACGTCTGGTCTGGCCTCGTCGCCATCACCATCTCCTTGCTCTGGATTGCAATCAAGCCTCCTTCTGCACAAGCCAACTCACAGCTAGGAGGATCCTTCTCTTTCCCCTGA</dnaseqindica>|
Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA033504 EnsemblPlants:BGIOSGA033504]|
}}
[[Category:Genes]]
[[Category:Indica mRNA]]
[[Category:Oryza Sativa Indica Group]]
[[Category:Indica Genes]]
[[Category:Indica Chromosome 10]]
[[Category:Chromosome 10]]

← Older revision		Revision as of 16:08, 6 May 2017
Line 1:		Line 1:
−	~~BGIOSGA033504，namely '''csld4'''，is biosynthesis of cell walls and plant growth.~~

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−	~~==Annotated Information==~~
−	~~[[File:Figure 1.jpg\|200px\|thumb\|right\|Fig.1.Vegetative phenotypes of wild-type and mutation]]~~
−	~~[[File:Figure 2.png\|200px\|thumb\|right\|Fig.2. Development of the third-leaf blade in wild-type and mutation.]]~~
−	~~[[File:Figure 3.jpg\|200px\|thumb\|right\|Fig.3. Reproductive phenotypes of wild-type and mutation .]]~~
−	~~[[File:Figure 4.png\|200px\|thumb\|right\|Fig.4.In situhybridization of OsCSLD4in longitudinal sections of 10-d-old shoot apex]]~~
−	~~[[File:Figure 5.jpg\|200px\|thumb\|right\|Fig.5.Double-target in situhybridization of OsCSLD4and CDKB2;1in the shoot apex of wild-type plants. ]]~~
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−	~~===Function===~~
−	Cellulose synthase-like (CSL) genes are predicted to catalyse the biosynthesis of non-cellulosic polysaccharides such as the β-d-glycan backbone of hemicelluloses and are classified into nine subfamilies (CSLA–CSLH and CSLJ). The CSLD subfamily is conserved in all land plants, and among the nine CSL subfamilies, it shows the highest sequence similarity to the cellulose synthase genes, suggesting that it plays fundamental roles in plant development. The mutants of csld4 showed rolled and narrow leaf blades and a reduction in plant height（figure1）. The narrow leaf blade of sle1 was caused by reduced cell proliferation beginning at the P3 primordial stage （figure 2）. In addition to the size reduction of organs, sle1 mutants exhibited serious developmental defects in pollen formation , anther dehiscence（figure 3）, stomata formation, and cell arrangement in various tissues.
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−	~~===Expression===~~
−	In situ hybridization experiments showed that OsCSLD4 was expressed in a patchy pattern in developing organs（figure 4）. Double-target in situ hybridization and quantitative RT-PCR analyses revealed that SLE1 was expressed specifically during the M-phase of the cell cycle（figure 5）, and suggested that the cell-cycle regulation was altered in sle1 mutants. These results suggest that the OsCSLD4 protein plays a pivotal role in the M phase to regulate cell proliferation.
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−	~~==Labs working on this gene==~~
−	*1.Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1, Yayoi, Bunkyo-ku, Tokyo, 113–8657, Japan
−	*2.National Institute of Genetics, 1111 Yata, Mishima, Shizuoka, 411–8540, Japan
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−	~~==References==~~
−	1. Takanori Yoshikawa;Mitsugu Eiguchi;Ken-Ichiro Hibara;Jun-Ichi Ito;Yasuo Nagato, Rice SLENDER LEAF 1 gene encodes cellulose synthase-like D4 and is specifically expressed in M-phase cells to regulate cell proliferation. Journal of Experimental Botany, 2013, 64(7): 2049-2061
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−	2. Jiang Hu;Li Zhu;Dali Zeng;Zhenyu Gao;Longbiao Guo;Yunxia Fang;Guangheng Zhang;Guojun Dong;Meixian Yan;Jian Liu;Qian Qian.. Identification and characterization of NARROW AND ROLLED LEAF 1, a novel gene regulating leaf morphology and plant architecture in rice. Plant Molecular Biology, 2010, 73(3): 283-292
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−	~~3. Chao Wu;Yaping Fu;Guocheng Hu;Huamin Si;Shihua Cheng;Wenzhen Liu. Isolation and characterization of a rice mutant with narrow and rolled leaves. Planta, 2010, 232(2): 313-324~~
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−	~~==Structured Information==~~
−	~~{{IndicaGene\|~~
−	~~GeneName = BGIOSGA033504\|~~
−	~~Description = Csld4-cellulose synthase-like family d\|~~
−	~~Definition = Oryza sativa Indica Group BGIOSGA033504, complete gene.\|~~
−	~~tag = OSJNBA0056G17.16\|~~
−	~~tid = BGIOSGA033504-TA\|~~
−	~~pid = BGIOSGA033504-PA\|~~
−	~~Length = 3474\|~~
−	~~Source = Oryza sativa Indica Group~~
−
−	~~ORGANISM Oryza sativa Indica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Indica Chromosome 10\|Chromosome 10]]\|~~
−	~~AP = Chromosome 10:22128267..22131740\|~~
−	~~CDS = 22128267..22130942,22131033..22131740\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=IndicaChromosome10:22128267..22131740~~
−	~~source=RiceIndica10~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=IndicaChromosome10:22128267..22131740~~
−	~~source=RiceIndica10~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>ATGGCGTCGAAGGGCATCCTCAAGAACGGCGGTAAGCCGCCGACGGCGCCATCGTCGGCGGCGCCCACGGTGGTGTTCGGTCGGCGGACGGACTCGGGGCGATTCATCAGCTACTCCCGCGACGACCTTGACTCGGAGATCAGCAGCGTGGACTTCCAGGACTACCACGTCCACATCCCCATGACGCCGGACAACCAGCCCATGGACCCTGCCGCCGGCGACGAGCAGCAGTACGTGTCCAGCTCGCTCTTCACCGGCGGGTTCAACAGCGTGACACGCGCGCACGTGATGGAGAAGCAGGCGTCGTCGGCGAGGGCGACGGTGTCGGCGTGCATGGTGCAGGGGTGCGGGTCCAAGATCATGCGCAACGGGCGCGGCGCCGACATCCTCCCCTGCGAGTGCGACTTCAAGATCTGCGTGGACTGCTTCACCGACGCCGTCAAGGGCGGCGGCGGCGTGTGCCCGGGGTGCAAGGAGCCGTACAAGCACGCGGAGTGGGAGGAGGTGGTGTCGGCGTCCAACCACGACGCCATCAACAGGGCGCTGTCGCTGCCGCACGGGCACGGGCATGGCCCCAAGATGGAGAGGCGGCTGTCGCTGGTGAAGCAGAACGGGGGGGCGCCCGGCGAGTTCGACCACAACCGCTGGCTCTTCGAGACCAAGGGCACCTACGGCTACGGCAACGCAATCTGGCCCGAGGACGACGGCGTGGCGGGGCACCCCAAGGAGCTGATGAGCAAGCCATGGCGGCCGCTGACCCGCAAGCTCCGGATCCAGGCGGCGGTGATCAGCCCGTACAGGCTGCTGGTCCTGATCCGGCTGGTGGCGCTGGGGTTGTTCCTGATGTGGCGCATCAAGCACCAGAACGAGGACGCCATCTGGCTGTGGGGGATGTCCATCGTGTGCGAGCTGTGGTTCGCCTTGTCGTGGGTGCTGGACCAGCTGCCCAAGCTGTGCCCCATCAACCGCGCCACCGACCTGAGCGTGCTCAAGGACAAGTTCGAGACGCCCACGCCGAGCAACCCCACCGGCAAGTCCGACCTCCCCGGGATCGACATCTTCGTCTCCACCGCCGACCCGGAGAAGGAGCCCGTGCTGGTGACGGCCAACACCATCCTCTCCATCCTGGCCGCCGACTACCCCGTCGACAAGCTGGCGTGCTACGTGTCCGACGACGGCGGGGCGCTGCTGACGTTCGAGGCCATGGCGGAGGCGGCGAGCTTCGCCAACCTGTGGGTGCCATTCTGCCGGAAGCACGAGATCGAGCCGAGGAACCCCGACAGCTACTTCAACCTCAAGAGGGACCCGTTCAAGAACAAGGTGAAGGGCGACTTCGTCAAGGACAGGCGGCGGGTGAAGCGGGAGTACGACGAGTTCAAGGTCCGCGTCAATGGCCTCCCCGACGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGCGAGGAGATCCAGGCCATGAACCTGCAGCGGGAGAAGATGAAGGCCGGCGGCGACGAGCAGCAGCTGGAGCCGATAAAGATCCCCAAGGCGACGTGGATGGCGGACGGCACGCACTGGCCGGGGACGTGGCTGCAGGCGTCGCCGGAGCACGCGAGGGGCGACCACGCGGGGATCATACAGGTGATGCTAAAGCCTCCCAGTCCCAGTCCCAGCAGCAGCGGCGGCGACATGGAAAAGAGGGTGGATTTGTCGGGCGTGGACACCCGGCTGCCGATGCTGGTGTACGTGTCGCGGGAGAAGCGGCCGGGGTACGACCACAACAAGAAGGCGGGCGCCATGAACGCGCTGGTGCGGGCGTCGGCGATCATGTCCAACGGGCCGTTCATCCTCAACCTGGACTGCGACCACTACGTGTACAACTCCAAGGCGTTCCGGGAGGGGATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGCTACGTCCAGTTCCCGCAGCGCTTCGAGGGCATCGACCCCTCCGACCGCTACGCCAACCACAACACCGTCTTCTTCGACGTCAACATGCGCGCCCTCGACGGCCTCCAGGGCCCCGTCTATGTCGGAACTGGCTGCCTCTTCCGCCGCATCGCGCTCTACGGCTTCGACCCGCCCAGGTCCAAGGACCACACCACCCCGTGGTCCTGCTGCCTGCCACGTCGCCGCCGAACAAGATCCCAGCCCCAGCCCCAGGAGGAGGAGGAGGAGACGATGGCCCTCCGCATGGACATGGACGGCGCGATGAACATGGCGAGCTTCCCCAAGAAGTTCGGCAACTCGAGCTTCCTGATCGACTCCATCCCGGTGGCGGAGTTCCAGGGACGGCCGCTGGCGGACCACCCGTCGGTGAAGAACGGGCGGCCGCCGGGGGCGCTGACGATCCCGCGGGAGACGCTGGACGCGTCGATCGTGGCGGAGGCGATCAGCGTGGTGTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGACGAGGGTGGGTTGGATATACGGGTCGGTGACGGAGGACGTGGTCACCGGCTACCGCATGCACAACCGGGGGTGGAAGTCCGTCTACTGCGTCACCCACCGCGACGCCTTCCGCGGCACCGCCCCCATCAACCTCACCGACCGCCTCCACCAGGTCCTCCGATGGGCCACTGGCTCCGTCGAGATCTTCTTCTCACGCAACAACGCACTCTTCGCTTCCTCAAAGATGAAGGTTCTCCAGCGCATCGCTTACCTCAACGTTGGCATCTACCCCTTCACCTCCGTCTTCCTCATCGTCTACTGCTTCCTCCCGGCGCTCTCCCTCTTCTCGGGGCAGTTCATCGTGCAGACGCTCAACGTCACCTTCCTCACCTACCTGCTCATCATCACCATCACGCTCTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCCGGCATCGCGCTGGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGCGGAACCAGCGCCCACCTCGCCGCCGTCCTGCAGGGCCTTCTCAAGGTCATCGCCGGCATCGAGATCTCCTTCACCCTCACCTCCAAGCAGCTCGGCGACGACGTCGACGACGAGTTCGCCGAGCTCTACGCGGTCAAGTGGACGTCCCTCATGATACCGCCGCTCACCATCATAATGATCAACCTCGTCGCCATCGCCGTCGGCTTCAGCCGCACCATCTACAGCACCATCCCGCAGTGGAGCAAGCTTCTCGGTGGAGTCTTCTTCAGCTTCTGGGTCCTCGCGCATCTCTACCCCTTCGCCAAGGGCCTCATGGGCAGGAGGGGAAGGACACCCACCATCGTCTACGTCTGGTCTGGCCTCGTCGCCATCACCATCTCCTTGCTCTGGATTGCAATCAAGCCTCCTTCTGCACAAGCCAACTCACAGCTAGGAGGATCCTTCTCTTTCCCCTGA</cdnaseq>\|
−	AA = <aaseq>MASKGILKNGGKPPTAPSSAAPTVVFGRRTDSGRFISYSRDDLDSEISSVDFQDYHVHIPMTPDNQPMDPAAGDEQQYVSSSLFTGGFNSVTRAHVMEKQASSARATVSACMVQGCGSKIMRNGRGADILPCECDFKICVDCFTDAVKGGGGVCPGCKEPYKHAEWEEVVSASNHDAINRALSLPHGHGHGPKMERRLSLVKQNGGAPGEFDHNRWLFETKGTYGYGNAIWPEDDGVAGHPKELMSKPWRPLTRKLRIQAAVISPYRLLVLIRLVALGLFLMWRIKHQNEDAIWLWGMSIVCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQREKMKAGGDEQQLEPIKIPKATWMADGTHWPGTWLQASPEHARGDHAGIIQVMLKPPSPSPSSSGGDMEKRVDLSGVDTRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKAFREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKDHTTPWSCCLPRRRRTRSQPQPQEEEEETMALRMDMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKPPSAQANSQLGGSFSFP</aaseq>\|
−	DNA = <dnaseqindica>1..2676#2767..3474#ATGGCGTCGAAGGGCATCCTCAAGAACGGCGGTAAGCCGCCGACGGCGCCATCGTCGGCGGCGCCCACGGTGGTGTTCGGTCGGCGGACGGACTCGGGGCGATTCATCAGCTACTCCCGCGACGACCTTGACTCGGAGATCAGCAGCGTGGACTTCCAGGACTACCACGTCCACATCCCCATGACGCCGGACAACCAGCCCATGGACCCTGCCGCCGGCGACGAGCAGCAGTACGTGTCCAGCTCGCTCTTCACCGGCGGGTTCAACAGCGTGACACGCGCGCACGTGATGGAGAAGCAGGCGTCGTCGGCGAGGGCGACGGTGTCGGCGTGCATGGTGCAGGGGTGCGGGTCCAAGATCATGCGCAACGGGCGCGGCGCCGACATCCTCCCCTGCGAGTGCGACTTCAAGATCTGCGTGGACTGCTTCACCGACGCCGTCAAGGGCGGCGGCGGCGTGTGCCCGGGGTGCAAGGAGCCGTACAAGCACGCGGAGTGGGAGGAGGTGGTGTCGGCGTCCAACCACGACGCCATCAACAGGGCGCTGTCGCTGCCGCACGGGCACGGGCATGGCCCCAAGATGGAGAGGCGGCTGTCGCTGGTGAAGCAGAACGGGGGGGCGCCCGGCGAGTTCGACCACAACCGCTGGCTCTTCGAGACCAAGGGCACCTACGGCTACGGCAACGCAATCTGGCCCGAGGACGACGGCGTGGCGGGGCACCCCAAGGAGCTGATGAGCAAGCCATGGCGGCCGCTGACCCGCAAGCTCCGGATCCAGGCGGCGGTGATCAGCCCGTACAGGCTGCTGGTCCTGATCCGGCTGGTGGCGCTGGGGTTGTTCCTGATGTGGCGCATCAAGCACCAGAACGAGGACGCCATCTGGCTGTGGGGGATGTCCATCGTGTGCGAGCTGTGGTTCGCCTTGTCGTGGGTGCTGGACCAGCTGCCCAAGCTGTGCCCCATCAACCGCGCCACCGACCTGAGCGTGCTCAAGGACAAGTTCGAGACGCCCACGCCGAGCAACCCCACCGGCAAGTCCGACCTCCCCGGGATCGACATCTTCGTCTCCACCGCCGACCCGGAGAAGGAGCCCGTGCTGGTGACGGCCAACACCATCCTCTCCATCCTGGCCGCCGACTACCCCGTCGACAAGCTGGCGTGCTACGTGTCCGACGACGGCGGGGCGCTGCTGACGTTCGAGGCCATGGCGGAGGCGGCGAGCTTCGCCAACCTGTGGGTGCCATTCTGCCGGAAGCACGAGATCGAGCCGAGGAACCCCGACAGCTACTTCAACCTCAAGAGGGACCCGTTCAAGAACAAGGTGAAGGGCGACTTCGTCAAGGACAGGCGGCGGGTGAAGCGGGAGTACGACGAGTTCAAGGTCCGCGTCAATGGCCTCCCCGACGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGCGAGGAGATCCAGGCCATGAACCTGCAGCGGGAGAAGATGAAGGCCGGCGGCGACGAGCAGCAGCTGGAGCCGATAAAGATCCCCAAGGCGACGTGGATGGCGGACGGCACGCACTGGCCGGGGACGTGGCTGCAGGCGTCGCCGGAGCACGCGAGGGGCGACCACGCGGGGATCATACAGGTGATGCTAAAGCCTCCCAGTCCCAGTCCCAGCAGCAGCGGCGGCGACATGGAAAAGAGGGTGGATTTGTCGGGCGTGGACACCCGGCTGCCGATGCTGGTGTACGTGTCGCGGGAGAAGCGGCCGGGGTACGACCACAACAAGAAGGCGGGCGCCATGAACGCGCTGGTGCGGGCGTCGGCGATCATGTCCAACGGGCCGTTCATCCTCAACCTGGACTGCGACCACTACGTGTACAACTCCAAGGCGTTCCGGGAGGGGATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGCTACGTCCAGTTCCCGCAGCGCTTCGAGGGCATCGACCCCTCCGACCGCTACGCCAACCACAACACCGTCTTCTTCGACGTCAACATGCGCGCCCTCGACGGCCTCCAGGGCCCCGTCTATGTCGGAACTGGCTGCCTCTTCCGCCGCATCGCGCTCTACGGCTTCGACCCGCCCAGGTCCAAGGACCACACCACCCCGTGGTCCTGCTGCCTGCCACGTCGCCGCCGAACAAGATCCCAGCCCCAGCCCCAGGAGGAGGAGGAGGAGACGATGGCCCTCCGCATGGACATGGACGGCGCGATGAACATGGCGAGCTTCCCCAAGAAGTTCGGCAACTCGAGCTTCCTGATCGACTCCATCCCGGTGGCGGAGTTCCAGGGACGGCCGCTGGCGGACCACCCGTCGGTGAAGAACGGGCGGCCGCCGGGGGCGCTGACGATCCCGCGGGAGACGCTGGACGCGTCGATCGTGGCGGAGGCGATCAGCGTGGTGTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGACGAGGGTGGGTTGGATATACGGGTCGGTGACGGAGGACGTGGTCACCGGCTACCGCATGCACAACCGGGGGTGGAAGTCCGTCTACTGCGTCACCCACCGCGACGCCTTCCGCGGCACCGCCCCCATCAACCTCACCGACCGCCTCCACCAGGTCCTCCGATGGGCCACTGGCTCCGTCGAGATCTTCTTCTCACGCAACAACGCACTCTTCGCTTCCTCAAAGATGAAGGTGCCTAGCTTGCTATTCGATCGATTATTTTTCTTCTTCTTCTTCTTCTTCCGCTGCCGCCAAACAAACAATTATCCATTGCATTTGCAGGTTCTCCAGCGCATCGCTTACCTCAACGTTGGCATCTACCCCTTCACCTCCGTCTTCCTCATCGTCTACTGCTTCCTCCCGGCGCTCTCCCTCTTCTCGGGGCAGTTCATCGTGCAGACGCTCAACGTCACCTTCCTCACCTACCTGCTCATCATCACCATCACGCTCTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCCGGCATCGCGCTGGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGCGGAACCAGCGCCCACCTCGCCGCCGTCCTGCAGGGCCTTCTCAAGGTCATCGCCGGCATCGAGATCTCCTTCACCCTCACCTCCAAGCAGCTCGGCGACGACGTCGACGACGAGTTCGCCGAGCTCTACGCGGTCAAGTGGACGTCCCTCATGATACCGCCGCTCACCATCATAATGATCAACCTCGTCGCCATCGCCGTCGGCTTCAGCCGCACCATCTACAGCACCATCCCGCAGTGGAGCAAGCTTCTCGGTGGAGTCTTCTTCAGCTTCTGGGTCCTCGCGCATCTCTACCCCTTCGCCAAGGGCCTCATGGGCAGGAGGGGAAGGACACCCACCATCGTCTACGTCTGGTCTGGCCTCGTCGCCATCACCATCTCCTTGCTCTGGATTGCAATCAAGCCTCCTTCTGCACAAGCCAACTCACAGCTAGGAGGATCCTTCTCTTTCCCCTGA</dnaseqindica>\|
−	~~Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA033504 EnsemblPlants:BGIOSGA033504]\|~~
−	}}
−	~~[[Category:Genes]]~~
−	~~[[Category:Indica mRNA]]~~
−	~~[[Category:Oryza Sativa Indica Group]]~~
−	~~[[Category:Indica Genes]]~~
−	~~[[Category:Indica Chromosome 10]]~~
−	~~[[Category:Chromosome 10]]~~

← Older revision		Revision as of 08:43, 3 June 2014
Line 1:		Line 1:
−	BGIOSGA033504，namely '''csld4'''，is biosynthesis of cell walls and plant growth	+	BGIOSGA033504，namely '''csld4'''，is biosynthesis of cell walls and plant growth.

← Older revision		Revision as of 08:43, 3 June 2014
Line 1:		Line 1:
−	BGIOSGA033504，namely ~~csld4， is~~ biosynthesis of cell walls and plant growth	+	BGIOSGA033504，namely '''csld4'''，is biosynthesis of cell walls and plant growth

← Older revision		Revision as of 08:43, 3 June 2014
Line 1:		Line 1:
−	~~csld4:~~biosynthesis of cell walls and plant growth	+	BGIOSGA033504，namely csld4， is biosynthesis of cell walls and plant growth

@@ Line 26: / Line 26: @@
 ==Labs working on this gene==
-Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1, Yayoi, Bunkyo-ku, Tokyo, 113–8657, Japan
+*1.Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1, Yayoi, Bunkyo-ku, Tokyo, 113–8657, Japan
-National Institute of Genetics, 1111 Yata, Mishima, Shizuoka, 411–8540, Japan
+*2.National Institute of Genetics, 1111 Yata, Mishima, Shizuoka, 411–8540, Japan
 ==References==

@@ Line 35: / Line 35: @@
 ==References==
 . Takanori Yoshikawa;Mitsugu Eiguchi;Ken-Ichiro Hibara;Jun-Ichi Ito;Yasuo Nagato, Rice SLENDER LEAF 1 gene encodes cellulose synthase-like D4 and is specifically expressed in M-phase cells to regulate cell proliferation. Journal of Experimental Botany, 2013, 64(7): 2049-2061
 . Jiang Hu;Li Zhu;Dali Zeng;Zhenyu Gao;Longbiao Guo;Yunxia Fang;Guangheng Zhang;Guojun Dong;Meixian Yan;Jian Liu;Qian Qian.. Identification and characterization of NARROW AND ROLLED LEAF 1, a novel gene regulating leaf morphology and plant architecture in rice. Plant Molecular Biology, 2010, 73(3): 283-292
 . Chao Wu;Yaping Fu;Guocheng Hu;Huamin Si;Shihua Cheng;Wenzhen Liu. Isolation and characterization of a rice mutant with narrow and rolled leaves. Planta, 2010, 232(2): 313-324
 ==Structured Information==

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+csld4:biosynthesis of cell walls and plant growth
 ==Annotated Information==
 ===Function===
-Please input function information here.
+Cellulose synthase-like (CSL) genes are predicted to catalyse the biosynthesis of non-cellulosic polysaccharides such as the β-d-glycan backbone of hemicelluloses and are classified into nine subfamilies (CSLA–CSLH and CSLJ). The CSLD subfamily is conserved in all land plants, and among the nine CSL subfamilies, it shows the highest sequence similarity to the cellulose synthase genes, suggesting that it plays fundamental roles in plant development. The mutants of csld4 showed rolled and narrow leaf blades and a reduction in plant height（figure1）. The narrow leaf blade of sle1 was caused by reduced cell proliferation beginning at the P3 primordial stage （figure 2）. In addition to the size reduction of organs, sle1 mutants exhibited serious developmental defects in pollen formation , anther dehiscence（figure 3）, stomata formation, and cell arrangement in various tissues.
 ===Expression===
-Please input expression information here.
+In situ hybridization experiments showed that OsCSLD4 was expressed in a patchy pattern in developing organs（figure 4）. Double-target in situ hybridization and quantitative RT-PCR analyses revealed that SLE1 was expressed specifically during the M-phase of the cell cycle（figure 5）, and suggested that the cell-cycle regulation was altered in sle1 mutants. These results suggest that the OsCSLD4 protein plays a pivotal role in the M phase to regulate cell proliferation.
 ==Labs working on this gene==
-Please input related labs here.
+Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1, Yayoi, Bunkyo-ku, Tokyo, 113–8657, Japan
 ==References==
-Please input cited references here.
+. Takanori Yoshikawa;Mitsugu Eiguchi;Ken-Ichiro Hibara;Jun-Ichi Ito;Yasuo Nagato, Rice SLENDER LEAF 1 gene encodes cellulose synthase-like D4 and is specifically expressed in M-phase cells to regulate cell proliferation. Journal of Experimental Botany, 2013, 64(7): 2049-2061
 ==Structured Information==

← Older revision		Revision as of 17:38, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{IndicaGene\|		{{IndicaGene\|
	GeneName = BGIOSGA033504\|		GeneName = BGIOSGA033504\|