Os01g0572300 - Revision history

Xysj1985 at 10:42, 5 April 2017

2017-04-05T10:42:04Z

Zhennan at 12:17, 22 March 2017

2017-03-22T12:17:58Z

192.168.72.52 at 04:47, 14 May 2015

2015-05-14T04:47:27Z

124.16.129.48 at 18:53, 22 July 2012

2012-07-22T18:53:15Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os01g0572300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001049917.1 GI:115437791 GeneID:4326304| Length = 264..."

2012-06-25T04:45:44Z

Created page with "{{JaponicaGene| GeneName = Os01g0572300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001049917.1 GI:115437791 GeneID:4326304| Length = 264..."

New page

{{JaponicaGene|
GeneName = Os01g0572300|
Description = Zinc finger, C2H2-type domain containing protein|
Version = NM_001049917.1 GI:115437791 GeneID:4326304|
Length = 2648 bp|
Definition = Oryza sativa Japonica Group Os01g0572300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
AP = Chromosome 1:23650769..23653416|
CDS = 23650769..23651127,23652426..23653416|
GCID = <gbrowseImage1>
name=NC_008394:23650769..23653416
source=RiceChromosome01
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008394:23650769..23653416
source=RiceChromosome01
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaacctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaaggaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccctcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcccactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccaggcgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaaggccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccaccaccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgccgcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccagcatcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtgaagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctgcagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgccaccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctgctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggcgcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgccaccttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggcaacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccggagcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttcctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgcatgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccatggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgagccatggcatggcatgggcagccatagctaa</cdnaseq>|
AA = <aaseq>MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVR KKVYICPEASCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHS KICGTREYKCDCGTIFSRRDSFITHRAFCDALTEESAKAIGGIPAAMAAPGHHHHHHH HHHQLLFSPPPVMAHHQELAALQEQQQQQHHQDVMQSPHQHQQQQQQRQQLVQQNCGY AVKPEMAPWPTTMPYDHHHPLLQPLCNANAAATAQSSATSAPPTTPQLPAAAAAAHLS ATALLQKAAQMGATIGGAGTGAAGAHYAHMASPAGAGAPAGGSATFGLGLSCLNTHQD GGGGGGNGLIPAGMMGHLARTASHGRSGEDVAGAGGGGGDGMTRDFLGLRAFSHRDIL LAGFDSSCMGHVNAAAGMAGYEPPPPHHGQPQHQHQQQQQQQQGGSNEPWHGMGSHS</aaseq>|
DNA = <dnaseqindica>1..359#1658..2648#atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaacctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaaggaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccctcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcccactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccaggtccttcttcttcctccctcctcctccatcttgcttgcttccatccatccatggcgatcgattgcagcacttgcactcctactgccttctgctcagatatacctgccttggctggcttgccgtgctcctttctcattgccactttgccagtaatccagtgttctcgctgccgcctgcgctttcagttggcacagtgacgagtaggaatcgaagcagcctataagatgagcgtttgttagtgttaacacacctgtaatcatccaataattagggcagcgatagatataccggttgttgattaaccagcaacaaccatgtgcccatccctgccgcgagcatctagccgaaaagatttgtgaacagtggcaactagtacgtagcttagctagctgctcgctgcagcagcgaaacaagcaaagaaaagaagccatatcgatcgatcgacatcgacatcgagatcgagattggagtcgtttcttgcctcttcttctttttgtttcttggcttgtgctgccactgccatccatggctgaaacctcctttggattgatccgggctgatgaatgcgcacggtgcaggacccgatggagacgacgacgacgatgacgacgacgctactagtggtagctaggttggtggtagtactactggcttgtgcgtatgcgcgtgtctgtttgcattgcgtccgtgtgatgagagagagaaatgagagattgggaaacaaacaagcagcaaagctatttgcccataggacaaaggaaggaggggagatctgagcttgatgatgatgagctatggctagctagctgtggtggcagctgatgatgctgagccatggaggaagaaagagaggaggaggaggaagaaagagagacatgtgaatctctttgcagtcgtctgcatcctgctcctgcatggatggatggatggcttttccatctctctctctctccctctctctcccaggctttgcctatgctgttcatcctagccactattcctcctgcctaattgcctactccactctactctgcaagagtgttcatgcatggctatctctctgtgttgtcacttccatggagttcattctagcttgagcatctctctctatcctttttttttttgagatggctataggtgtagtaggagtgtagaagcaacaatgacaagtgagcaagaatacgggggaaatatgatatctttggcttttggccttttgaaatttgatgttttttggttttggtgtgatccgtgtggtttttgatgtgtgtgtctttcggttcttgcattgcatgcaggcgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaaggccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccaccaccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgccgcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccagcatcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtgaagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctgcagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgccaccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctgctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggcgcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgccaccttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggcaacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccggagcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttcctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgcatgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccatggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgagccatggcatggcatgggcagccatagctaa</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049917.1 RefSeq:Os01g0572300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

@@ Line 6: / Line 6: @@
 ===Function===
-* The Cys 2/His 2 zinc-finger proteins (ZFPs) constitute one of the largest transcription factor class regulatory protein families in eukaryotes. <ref name="ref1" /> <ref name="ref2" />
+* The Cys 2/His 2 zinc-finger proteins (ZFPs) constitute one of the largest transcription factor class regulatory protein families in eukaryotes. <ref name="ref1" />
 * The classical C2H2 zinc finger domain is involved in a wide range of functions and can bind to DNA, RNA and proteins.
 * Plant Q-type C2H2 zinc finger transcription factors play an important role in plant tolerance to various environmental stresses such as drought, cold, osmotic stress, wounding and mechanical loading.
@@ Line 19: / Line 19: @@
 <references>
 * <ref name="ref1">
-Xu H, Watanabe KA, Zhang L, Shen QJ. WRKY transcription factor genes in wild
+Agarwal P, Arora R, Ray S, Singh AK, Singh VP, Takatsuji H, Kapoor S, Tyagi
-rice Oryza nivara. DNA Res. 2016 Aug;23(4):311-23. doi: 10.1093/dnares/dsw025.
+AK. Genome-wide identification of C2H2 zinc-finger gene family in rice and their
-PubMed PMID: 27345721; PubMed Central PMCID: PMC4991837.
+phylogeny and expression analysis. Plant Mol Biol. 2007 Nov;65(4):467-85. Epub
-</ref>
+Jul 4. PubMed PMID: 17610133.
 </ref>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os01g0572300''' was reported as '''''ZOS1-10''''' in 2007 <ref name="ref1" /> by researchers from the India. It is a member of C2H2 transcription factor gene family.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* The Cys 2/His 2 zinc-finger proteins (ZFPs) constitute one of the largest transcription factor class regulatory protein families in eukaryotes. <ref name="ref1" /> <ref name="ref2" />
+* The classical C2H2 zinc finger domain is involved in a wide range of functions and can bind to DNA, RNA and proteins.
-===Expression===
+* Plant Q-type C2H2 zinc finger transcription factors play an important role in plant tolerance to various environmental stresses such as drought, cold, osmotic stress, wounding and mechanical loading.
-Please input expression information here.
+* The ZFPs not only interact with DNA or chromatin but their interactions with RNA and other proteins are also well documented in lower as well as higher eukaryotes.
 ==Labs working on this gene==
-Please input related labs here.
+* Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, New Delhi 110021, India
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

← Older revision		Revision as of 04:47, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
−	~~GeneName = Os01g0572300\|~~
−	~~Description = Zinc finger, C2H2-type domain containing protein\|~~
−	~~Version = NM_001049917.1 GI:115437791 GeneID:4326304\|~~
−	~~Length = 2648 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os01g0572300, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 1\|Chromosome 1]]\|~~
−	~~AP = Chromosome 1:23650769..23653416\|~~
−	~~CDS = 23650769..23651127,23652426..23653416\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008394:23650769..23653416~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008394:23650769..23653416~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaacctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaaggaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccctcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcccactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccaggcgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaaggccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccaccaccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgccgcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccagcatcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtgaagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctgcagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgccaccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctgctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggcgcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgccaccttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggcaacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccggagcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttcctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgcatgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccatggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgagccatggcatggcatgggcagccatagctaa</cdnaseq>\|
−	AA = <aaseq>MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVR KKVYICPEASCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHS KICGTREYKCDCGTIFSRRDSFITHRAFCDALTEESAKAIGGIPAAMAAPGHHHHHHH HHHQLLFSPPPVMAHHQELAALQEQQQQQHHQDVMQSPHQHQQQQQQRQQLVQQNCGY AVKPEMAPWPTTMPYDHHHPLLQPLCNANAAATAQSSATSAPPTTPQLPAAAAAAHLS ATALLQKAAQMGATIGGAGTGAAGAHYAHMASPAGAGAPAGGSATFGLGLSCLNTHQD GGGGGGNGLIPAGMMGHLARTASHGRSGEDVAGAGGGGGDGMTRDFLGLRAFSHRDIL LAGFDSSCMGHVNAAAGMAGYEPPPPHHGQPQHQHQQQQQQQQGGSNEPWHGMGSHS</aaseq>\|
−	DNA = <dnaseqindica>1..359#1658..2648#atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaacctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaaggaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccctcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcccactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccaggtccttcttcttcctccctcctcctccatcttgcttgcttccatccatccatggcgatcgattgcagcacttgcactcctactgccttctgctcagatatacctgccttggctggcttgccgtgctcctttctcattgccactttgccagtaatccagtgttctcgctgccgcctgcgctttcagttggcacagtgacgagtaggaatcgaagcagcctataagatgagcgtttgttagtgttaacacacctgtaatcatccaataattagggcagcgatagatataccggttgttgattaaccagcaacaaccatgtgcccatccctgccgcgagcatctagccgaaaagatttgtgaacagtggcaactagtacgtagcttagctagctgctcgctgcagcagcgaaacaagcaaagaaaagaagccatatcgatcgatcgacatcgacatcgagatcgagattggagtcgtttcttgcctcttcttctttttgtttcttggcttgtgctgccactgccatccatggctgaaacctcctttggattgatccgggctgatgaatgcgcacggtgcaggacccgatggagacgacgacgacgatgacgacgacgctactagtggtagctaggttggtggtagtactactggcttgtgcgtatgcgcgtgtctgtttgcattgcgtccgtgtgatgagagagagaaatgagagattgggaaacaaacaagcagcaaagctatttgcccataggacaaaggaaggaggggagatctgagcttgatgatgatgagctatggctagctagctgtggtggcagctgatgatgctgagccatggaggaagaaagagaggaggaggaggaagaaagagagacatgtgaatctctttgcagtcgtctgcatcctgctcctgcatggatggatggatggcttttccatctctctctctctccctctctctcccaggctttgcctatgctgttcatcctagccactattcctcctgcctaattgcctactccactctactctgcaagagtgttcatgcatggctatctctctgtgttgtcacttccatggagttcattctagcttgagcatctctctctatcctttttttttttgagatggctataggtgtagtaggagtgtagaagcaacaatgacaagtgagcaagaatacgggggaaatatgatatctttggcttttggccttttgaaatttgatgttttttggttttggtgtgatccgtgtggtttttgatgtgtgtgtctttcggttcttgcattgcatgcaggcgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaaggccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccaccaccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgccgcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccagcatcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtgaagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctgcagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgccaccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctgctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggcgcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgccaccttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggcaacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccggagcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttcctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgcatgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccatggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgagccatggcatggcatgggcagccatagctaa</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049917.1 RefSeq:Os01g0572300]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 1]]~~
−	~~[[Category:~~Chromosome 1]]

← Older revision		Revision as of 18:53, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os01g0572300\|		GeneName = Os01g0572300\|