Os01g0633500 - Revision history

Liman: /* Function */

2016-12-13T02:43:24Z

‎Function

Liman at 02:43, 13 December 2016

2016-12-13T02:43:00Z

Liman: /* Annotated Information */

2016-12-13T02:42:39Z

‎Annotated Information

Liman: /* Function */

2016-12-13T02:42:18Z

‎Function

Liman: /* Annotated Information */

2016-12-13T02:42:00Z

‎Annotated Information

Liman at 02:41, 13 December 2016

2016-12-13T02:41:38Z

Liman at 02:26, 13 December 2016

2016-12-13T02:26:19Z

Liman at 14:08, 15 October 2016

2016-10-15T14:08:57Z

192.168.72.52 at 04:50, 14 May 2015

2015-05-14T04:50:12Z

124.16.129.48 at 18:55, 22 July 2012

2012-07-22T18:55:06Z

@@ Line 8: / Line 8: @@
 [[File:Os01g0633500-1.png|right|thumb|200px|'''Figure 1. Metabolic pathways for the synthesis of pro-anthocyanidins and anthocyanins.''' '' <ref name="ref1" />.'']]
 * '''''Rd''''' encodes dihydroflavonol-4-reductase (DFR).
-* Red coloration in rice grains is determined by the complementary effect of two genes, '''''Rc''''' and '''''Rd''''', and each of these genes is inherited monogenetically. '''''Rc''''' gene is responsible for the accumulation of pigments in the pericarp of brown-colored grains. Furthermore, red rice grains require the '''''Rd'''''' gene to increase the content of the pigment.
+* Red coloration in rice grains is determined by the complementary effect of two genes, '''''Rc''''' and '''''Rd''''', and each of these genes is inherited monogenetically. '''''Rc''''' gene is responsible for the accumulation of pigments in the pericarp of brown-colored grains. Furthermore, red rice grains require the '''''Rd''''' gene to increase the content of the pigment.
 ===Mutation===

@@ Line 30: / Line 30: @@
 <references>
 * <ref name="ref1">
 </ref>

@@ Line 11: / Line 11: @@
 ===Mutation===
 * The Rc and Rd genes are involved in the red pigmentation in rice grains, Rc and rd are involved in the brown pigmentation in rice grains, and either rc and rd or rc and Rd produce ordinary white rice grains (Figure 3).
 ===Expression ===

@@ Line 6: / Line 6: @@
 ===Function===
-[[File:Os01g0633500-1.png|right|thumb|150px|'''Figure 1. Metabolic pathways for the synthesis of pro-anthocyanidins and anthocyanins.''' '' <ref name="ref1" />.'']]
+[[File:Os01g0633500-1.png|right|thumb|200px|'''Figure 1. Metabolic pathways for the synthesis of pro-anthocyanidins and anthocyanins.''' '' <ref name="ref1" />.'']]
 * '''''Rd''''' encodes dihydroflavonol-4-reductase (DFR).
 * Red coloration in rice grains is determined by the complementary effect of two genes, '''''Rc''''' and '''''Rd''''', and each of these genes is inherited monogenetically. '''''Rc''''' gene is responsible for the accumulation of pigments in the pericarp of brown-colored grains. Furthermore, red rice grains require the '''''Rd'''''' gene to increase the content of the pigment.
 ===Mutation===
 [[File:Os01g0633500-2.png|right|thumb|400px|'''Figure 3. Phenotypes and genotypes of Rc and Rd.''' '' <ref name="ref1" />.'']]

@@ Line 6: / Line 6: @@
 ===Function===
-[[File:Os01g0633500-1.png|right|thumb|400px|'''Figure 1. Metabolic pathways for the synthesis of pro-anthocyanidins and anthocyanins.''' '' <ref name="ref1" />.'']]
+[[File:Os01g0633500-1.png|right|thumb|150px|'''Figure 1. Metabolic pathways for the synthesis of pro-anthocyanidins and anthocyanins.''' '' <ref name="ref1" />.'']]
 * '''''Rd''''' encodes dihydroflavonol-4-reductase (DFR).
 * Red coloration in rice grains is determined by the complementary effect of two genes, '''''Rc''''' and '''''Rd''''', and each of these genes is inherited monogenetically. '''''Rc''''' gene is responsible for the accumulation of pigments in the pericarp of brown-colored grains. Furthermore, red rice grains require the '''''Rd'''''' gene to increase the content of the pigment.
@@ Line 17: / Line 17: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 *Genetic Diversity Department, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan,

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os01g0633500 was reported as '''''Rd''''' in 2006<ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os01g0633500 <=> Rd, DFR, OsDFR, OS-DFR
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+*Genetic Diversity Department, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan,
 ==References==
 <references>

← Older revision		Revision as of 04:50, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
−	~~GeneName = Os01g0633500\|~~
−	~~Description = Similar to NADPH-dependent reductase A1 (Fragment)\|~~
−	~~Version = NM_001050192.1 GI:115438754 GeneID:4326597\|~~
−	~~Length = 1964 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os01g0633500, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 1\|Chromosome 1]]\|~~
−	~~AP = Chromosome 1:27039560..27041523\|~~
−	~~CDS = 27039901..27040261,27040649..27041259\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008394:27039560..27041523~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008394:27039560..27041523~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>cgttgggaagacgaagccgttgctggagctggcggggtagaaggagaggctgacgctgtggaaggccgacctgggcgaggaaggcagcttcgacgcggcgatcaggggttgcacgggcgtgttccacgtcgcgacgcccatggacttcgagtccgaggacccggagaacgaggtggtcaagcccaccgtggaagggatgctgagcatcatgcgggcctgcagggacgccggcaccgtcaagcgcatcgtcttcacctcctccgccgggaccgtcaacatcgaggagcggcagcgcccctcctacgaccacgacgactggagcgacatcgacttctgccgccgcgtcaagatgaccggatggatgtacttcgtgtccaagtcattggcggagaaggccgccatggaatacgcgagggagcacgggctggacctcatcagcgtcatccccacgctcgtcgtcgggcccttcatcagcaacgggatgccgccgagccacgtcaccgcgctggcgctgctcacggggaacgaggcccactactcgatcctgaagcaggtgcagttcgtccacctcgacgacctctgcgacgccgagatcttcctcttcgagagccccgaggcgcgcggccgctacgtctgctcctcccacgacgccaccatccacggcctcgcgacgatgctcgcggacatgttcccggagtacgacgtgccgcggagctttcccgggatcgacgccgaccacctccagccggtgcacttctcgtcgtggaagctcctcgcccacgggttcaggttcaggtacacgctggaggacatgttcgaggccgccgtccggacgtgcagggagaaggggcttctcccgccgctgccgccaccgccgacgacggccgtggccggaggagacggctcggcgggtgtggccggcgagaaggaaccgatactggggagggggaccgggacggcggttggtgctga</cdnaseq>\|
−	AA = <aaseq>RWEDEAVAGAGGVEGEADAVEGRPGRGRQLRRGDQGLHGRVPRR DAHGLRVRGPGERGGQAHRGRDAEHHAGLQGRRHRQAHRLHLLRRDRQHRGAAAPLLR PRRLERHRLLPPRQDDRMDVLRVQVIGGEGRHGIREGARAGPHQRHPHARRRALHQQR DAAEPRHRAGAAHGERGPLLDPEAGAVRPPRRPLRRRDLPLREPRGARPLRLLLPRRH HPRPRDDARGHVPGVRRAAELSRDRRRPPPAGALLVVEAPRPRVQVQVHAGGHVRGRR PDVQGEGASPAAAATADDGRGRRRRLGGCGRREGTDTGEGDRDGGWC</aaseq>\|
−	DNA = <dnaseqindica>342..702#1090..1700#tgcgaatccaacacaagcaccgcggcgtagtactactacttgcgcgcgcgtgttagattcgcgtgcgaatccaacacaagcagatcgatcacgcacggtacgccatgggcgaggcggtgaaggggccagtggtggtgacgggcgcgtcgggcttcgtcggctcatggctcgtcatgaagctcctccaggccggctacaccgtccgcgccacagtgcgcgacccctgtgagctctctcatcgtgcactctagctctctcctcgtagtttactgactccaattatatatgccgcttgcttgactctgacaagtgtacgtgttgttgttgttgttttcagctaacgttgggaagacgaagccgttgctggagctggcggggtagaaggagaggctgacgctgtggaaggccgacctgggcgaggaaggcagcttcgacgcggcgatcaggggttgcacgggcgtgttccacgtcgcgacgcccatggacttcgagtccgaggacccggagaacgaggtggtcaagcccaccgtggaagggatgctgagcatcatgcgggcctgcagggacgccggcaccgtcaagcgcatcgtcttcacctcctccgccgggaccgtcaacatcgaggagcggcagcgcccctcctacgaccacgacgactggagcgacatcgacttctgccgccgcgtcaagatgaccggatgggtatgtatcgaaaatgttgtcgtgggttaggaacaacgatcctccacgtacataaaacgaaacgataagttaacatgagcatgattaatattagtatggtataattgatatttgtttaaaaatctaaaaaatattaatatgatttttaaataactattttatagaattttttttatgaaaacacaaggaaacagaaattgagaaatagtacgttcaaactcacccttaagcaactgaaactagcttagcacgtgaatttggccgtgtgagtcatatgatatgaaggtcggggatgttttttttttttttgcggggatgtaattaactaattatgtaaaccatttctattgtctaaaagaagttagcaagtgataattgtggtggcagatgtacttcgtgtccaagtcattggcggagaaggccgccatggaatacgcgagggagcacgggctggacctcatcagcgtcatccccacgctcgtcgtcgggcccttcatcagcaacgggatgccgccgagccacgtcaccgcgctggcgctgctcacggggaacgaggcccactactcgatcctgaagcaggtgcagttcgtccacctcgacgacctctgcgacgccgagatcttcctcttcgagagccccgaggcgcgcggccgctacgtctgctcctcccacgacgccaccatccacggcctcgcgacgatgctcgcggacatgttcccggagtacgacgtgccgcggagctttcccgggatcgacgccgaccacctccagccggtgcacttctcgtcgtggaagctcctcgcccacgggttcaggttcaggtacacgctggaggacatgttcgaggccgccgtccggacgtgcagggagaaggggcttctcccgccgctgccgccaccgccgacgacggccgtggccggaggagacggctcggcgggtgtggccggcgagaaggaaccgatactggggagggggaccgggacggcggttggtgctgaaacagaagcgttggtcaaatgagtgttgactagtgagtccagagaacggtattgaaattgatcgtgtttcgctgctccttgcctcgttggcttcgtctatttcacaatgcgagatttggaataaatcagagcggttaatcctgtaagttcatatgtaacgtacccatttgattttttattggttacatatggttactccctccggtttcattttaattgacactttgaacaataatacgttttacaagatatacctttgacttt</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050192.1 RefSeq:Os01g0633500]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 1]]~~
−	~~[[Category:~~Chromosome 1]]

← Older revision		Revision as of 18:55, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os01g0633500\|		GeneName = Os01g0633500\|