Os01g0678600 - Revision history

Xysj1987: /* Annotated Information */

2016-10-08T08:55:38Z

‎Annotated Information

Xysj1987: /* References */

2016-10-08T08:54:38Z

‎References

Xysj1987: /* Annotated Information */

2016-10-08T08:53:48Z

‎Annotated Information

Xysj1987 at 08:53, 8 October 2016

2016-10-08T08:53:38Z

Xysj1987: /* Function */

2016-10-08T08:51:10Z

‎Function

Xysj1987: /* Function */

2016-10-08T08:50:03Z

‎Function

Xysj1987 at 08:49, 8 October 2016

2016-10-08T08:49:53Z

192.168.72.52 at 04:52, 14 May 2015

2015-05-14T04:52:17Z

124.16.129.48 at 18:56, 22 July 2012

2012-07-22T18:56:20Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os01g0678600| Description = Ribosomal protein S20 family protein| Version = NM_001050394.1 GI:115439158 GeneID:4325273| Length = 2018 bp| Defin..."

2012-06-25T04:53:34Z

Created page with "{{JaponicaGene| GeneName = Os01g0678600| Description = Ribosomal protein S20 family protein| Version = NM_001050394.1 GI:115439158 GeneID:4325273| Length = 2018 bp| Defin..."

New page

{{JaponicaGene|
GeneName = Os01g0678600|
Description = Ribosomal protein S20 family protein|
Version = NM_001050394.1 GI:115439158 GeneID:4325273|
Length = 2018 bp|
Definition = Oryza sativa Japonica Group Os01g0678600, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
AP = Chromosome 1:29678164..29680181|
CDS = 29678196..29678343,29678425..29678630,29679657..29679893|
GCID = <gbrowseImage1>
name=NC_008394:29678164..29680181
source=RiceChromosome01
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008394:29678164..29680181
source=RiceChromosome01
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgaccgccacctccacgctcttctccctctcctccctctccgcctctctcccttcccccgcgcagccagccccggcgtctctctccctccgcgccgtctccccgcgggcccgcctgtccgcctcctacgccgccttccccatcggtgggatcggggcatgggcggcggcgacgccggcgtcgtcggggaggtggaggaggaggggactggaggtggtgtgcgaggcggccaagaccggcaccgcgaccgggaggcgcccggactcggtcaagaagagggagcggcagaacgaccggcaccgcatccgcaaccatgcacgcaaggccgagatgcgcaccaggatgaagaaggttttgaaagcccttgaaaagctgagaaagaaagctgatgccacacctgaagatatcattcaaatagagaaatggatttctgaggcatacaaagccattgacaagacagtgaaggttggcgccatgcacaggaatactggtaaccatcgcaagtcccttcttgcgaggaggaagaaggccatcgagatactccgtggttggtatgttccaaacgctgaacctgctgctaccagctag</cdnaseq>|
AA = <aaseq>MATATSTLFSLSSLSASLPSPAQPAPASLSLRAVSPRARLSASY AAFPIGGIGAWAAATPASSGRWRRRGLEVVCEAAKTGTATGRRPDSVKKRERQNDRHR IRNHARKAEMRTRMKKVLKALEKLRKKADATPEDIIQIEKWISEAYKAIDKTVKVGAM HRNTGNHRKSLLARRKKAIEILRGWYVPNAEPAATS</aaseq>|
DNA = <dnaseqindica>33..180#262..467#1494..1730#ggtgctcctcgagctcactccgcaccgcagccatggcgaccgccacctccacgctcttctccctctcctccctctccgcctctctcccttcccccgcgcagccagccccggcgtctctctccctccgcgccgtctccccgcgggcccgcctgtccgcctcctacgccgccttccccatcggtaccacctccctctctctctctcctcgagagtgttcttcctttgctcttattcgtcggtgatgcgaaatgccttgttcaggtgggatcggggcatgggcggcggcgacgccggcgtcgtcggggaggtggaggaggaggggactggaggtggtgtgcgaggcggccaagaccggcaccgcgaccgggaggcgcccggactcggtcaagaagagggagcggcagaacgaccggcaccgcatccgcaaccatgcacgcaaggccgagatgcgcaccaggatgaagaaggtagtacataaaatgtggtgctgccctttctcgcattgcctatgatccagagctttccaatggttccatcccactgtaaaaaaaaatgatataggagtacttagttgcacattgcacgatacactgtgcagagagaatgggaaattaggcgtaattagctgcgtcagtgcgtcaatcagctcatgagcagagtttcttgttagtacgccttcttggaaatgtagatggatttatgtaatgtccactgtccactgtcaagctccaaaaatggagtgaatgtgattttaaaaggtgctgcttatttgaattatagtatcaaactagtaatgtacccatgctaacgctacggcgatactatgtgataatgtaaatcatacaaccaaaagatagtatgtattttagcaaatcagattaacttaagatacacaaaaaagaaaaaagactaaagataagaagagttatcttattgttactctccctagttatacatagttgacgtgtactcttcagtcataaatatttgatgttatggcacagtaaaactttaagagtctgacttgcaacataacaaaatcagtcttatatcataatcgatcagattttgtagcttagcatcatataatttgttttcatgatcgtaatgaggcagttcaaactaatttataccattgataccattttactataagaccacatcgagacaatggtaatattcaatatcaatggattataacatcatgttcgccaatcatctacataatgtagtagttacattgacatctcaaaggagaaaactactaaactgaatttaatttcgcagttacctttcatgtgaactatagttattctgtcaatctaatggatatgctattatgaaatttacctgttagagaagcaagaggggttcatttgttgtacatatattccttttggttcctctaaaataagttacacttttatgcagcattcaatattataagttctttctatggatatgaaataccataagccttgttctttgattaggttttgaaagcccttgaaaagctgagaaagaaagctgatgccacacctgaagatatcattcaaatagagaaatggatttctgaggcatacaaagccattgacaagacagtgaaggttggcgccatgcacaggaatactggtaaccatcgcaagtcccttcttgcgaggaggaagaaggccatcgagatactccgtggttggtatgttccaaacgctgaacctgctgctaccagctagtctattgacaaatcgtcttcaggaattcgcagcagattcattgtcaacacgtcttgccaattttggacatgcatatgttgtttaaggaattaaatagctttgttatattctctccattccaagcgatgtgtatacctttggtccatgttatgtgttcatgttcttgctctggaagccttgaaacagaactgggccaatacttttctcccacttctgttatccttcacatcagtgttgtaaaatgacaagctgaaatattttttttctatggtaaggatgttttcaaag</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050394.1 RefSeq:Os01g0678600]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:19-Os01g0678600.png|right|thumb|427px|'''Figure 1.''' ''Characterization of the asl1 mutants.<ref name="ref1" />.'']]
+[[File:19-Os01g0678600.png|right|thumb|327px|'''Figure 1.''' ''Characterization of the asl1 mutants.<ref name="ref1" />.'']]
 ===Gene Symbol===
 *'''''Os01g0678600''''' '''<=>''' '''''ASL1,OsASL1'''''

@@ Line 29: / Line 29: @@
 * Institute of Plant Physiology and Ecology, Shanghai Institute for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:19-Os01g0678600.png|right|thumb|527px|'''Figure 1.''' ''Characterization of the asl1 mutants.<ref name="ref1" />.'']]
+[[File:19-Os01g0678600.png|right|thumb|427px|'''Figure 1.''' ''Characterization of the asl1 mutants.<ref name="ref1" />.'']]
 ===Gene Symbol===
 *'''''Os01g0678600''''' '''<=>''' '''''ASL1,OsASL1'''''

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Gene Symbol===
 *'''''Os01g0678600''''' '''<=>''' '''''ASL1,OsASL1'''''

@@ Line 9: / Line 9: @@
 * '''''ASL1''''' is involved in the establishment of the transcription/translation apparatus and plastid-to-nucleus signaling.
 * '''''ASL1''''' plays an important role in rice seedlings, especially at early stages.
 ===Expression===

@@ Line 5: / Line 5: @@
 *'''''Os01g0678600''''' '''<=>''' '''''ASL1,OsASL1'''''
 ===Function===
-* Plastid ribosomal proteins (PRPs) are essential for ribosome biogenesis, plastid protein biosynthesis, chloroplast differentiation, and early chloroplast development. * In their is study, the researchers identifies the first rice PRP mutant, asl1 (albino seedling lethality1), which exhibits an albino lethal phenotype at the seedling
+* Plastid ribosomal proteins (PRPs) are essential for ribosome biogenesis, plastid protein biosynthesis, chloroplast differentiation, and early chloroplast development. * In their is study, the researchers identifies the first rice PRP mutant, asl1 (albino seedling lethality1), which exhibits an albino lethal phenotype at the seedling stage.
 * '''''ASL1''''' is essential for chloroplast development in rice.
 * '''''ASL1''''' is involved in the establishment of the transcription/translation apparatus and plastid-to-nucleus signaling.
 * '''''ASL1''''' plays an important role in rice seedlings, especially at early stages.
 ===Expression===
 * The researchers used RT-PCR to examine the expression of ASL1 in WT plants (Figure 5A). The researchers detected a significantly high level of expression in young leaves, culms, and flag leaves but weak expression in roots and young panicles. The ASL1 transcript was substantially reduced in asl1 mutants, indicating that the mutation in ASL1 causes a decreased transcript level.

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os01g0678600''''' was reported as '''''ASL1''''' in 2013 <ref name="ref1" /> by researchers from China.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* Plastid ribosomal proteins (PRPs) are essential for ribosome biogenesis, plastid protein biosynthesis, chloroplast differentiation, and early chloroplast development. * In their is study, the researchers identifies the first rice PRP mutant, asl1 (albino seedling lethality1), which exhibits an albino lethal phenotype at the seedling
+stage.
 ===Expression===
-Please input expression information here.
+* The researchers used RT-PCR to examine the expression of ASL1 in WT plants (Figure 5A). The researchers detected a significantly high level of expression in young leaves, culms, and flag leaves but weak expression in roots and young panicles. The ASL1 transcript was substantially reduced in asl1 mutants, indicating that the mutation in ASL1 causes a decreased transcript level.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* Development Center of Plant Germplasm Resources, College of Life and Environmental Sciences, Shanghai Normal University, Shanghai 200234, China
+* Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
 ==References==
 Please input cited references here.

← Older revision		Revision as of 04:52, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
−	~~GeneName = Os01g0678600\|~~
−	~~Description = Ribosomal protein S20 family protein\|~~
−	~~Version = NM_001050394.1 GI:115439158 GeneID:4325273\|~~
−	~~Length = 2018 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os01g0678600, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 1\|Chromosome 1]]\|~~
−	~~AP = Chromosome 1:29678164..29680181\|~~
−	~~CDS = 29678196..29678343,29678425..29678630,29679657..29679893\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008394:29678164..29680181~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008394:29678164..29680181~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcgaccgccacctccacgctcttctccctctcctccctctccgcctctctcccttcccccgcgcagccagccccggcgtctctctccctccgcgccgtctccccgcgggcccgcctgtccgcctcctacgccgccttccccatcggtgggatcggggcatgggcggcggcgacgccggcgtcgtcggggaggtggaggaggaggggactggaggtggtgtgcgaggcggccaagaccggcaccgcgaccgggaggcgcccggactcggtcaagaagagggagcggcagaacgaccggcaccgcatccgcaaccatgcacgcaaggccgagatgcgcaccaggatgaagaaggttttgaaagcccttgaaaagctgagaaagaaagctgatgccacacctgaagatatcattcaaatagagaaatggatttctgaggcatacaaagccattgacaagacagtgaaggttggcgccatgcacaggaatactggtaaccatcgcaagtcccttcttgcgaggaggaagaaggccatcgagatactccgtggttggtatgttccaaacgctgaacctgctgctaccagctag</cdnaseq>\|
−	AA = <aaseq>MATATSTLFSLSSLSASLPSPAQPAPASLSLRAVSPRARLSASY AAFPIGGIGAWAAATPASSGRWRRRGLEVVCEAAKTGTATGRRPDSVKKRERQNDRHR IRNHARKAEMRTRMKKVLKALEKLRKKADATPEDIIQIEKWISEAYKAIDKTVKVGAM HRNTGNHRKSLLARRKKAIEILRGWYVPNAEPAATS</aaseq>\|
−	DNA = <dnaseqindica>33..180#262..467#1494..1730#ggtgctcctcgagctcactccgcaccgcagccatggcgaccgccacctccacgctcttctccctctcctccctctccgcctctctcccttcccccgcgcagccagccccggcgtctctctccctccgcgccgtctccccgcgggcccgcctgtccgcctcctacgccgccttccccatcggtaccacctccctctctctctctcctcgagagtgttcttcctttgctcttattcgtcggtgatgcgaaatgccttgttcaggtgggatcggggcatgggcggcggcgacgccggcgtcgtcggggaggtggaggaggaggggactggaggtggtgtgcgaggcggccaagaccggcaccgcgaccgggaggcgcccggactcggtcaagaagagggagcggcagaacgaccggcaccgcatccgcaaccatgcacgcaaggccgagatgcgcaccaggatgaagaaggtagtacataaaatgtggtgctgccctttctcgcattgcctatgatccagagctttccaatggttccatcccactgtaaaaaaaaatgatataggagtacttagttgcacattgcacgatacactgtgcagagagaatgggaaattaggcgtaattagctgcgtcagtgcgtcaatcagctcatgagcagagtttcttgttagtacgccttcttggaaatgtagatggatttatgtaatgtccactgtccactgtcaagctccaaaaatggagtgaatgtgattttaaaaggtgctgcttatttgaattatagtatcaaactagtaatgtacccatgctaacgctacggcgatactatgtgataatgtaaatcatacaaccaaaagatagtatgtattttagcaaatcagattaacttaagatacacaaaaaagaaaaaagactaaagataagaagagttatcttattgttactctccctagttatacatagttgacgtgtactcttcagtcataaatatttgatgttatggcacagtaaaactttaagagtctgacttgcaacataacaaaatcagtcttatatcataatcgatcagattttgtagcttagcatcatataatttgttttcatgatcgtaatgaggcagttcaaactaatttataccattgataccattttactataagaccacatcgagacaatggtaatattcaatatcaatggattataacatcatgttcgccaatcatctacataatgtagtagttacattgacatctcaaaggagaaaactactaaactgaatttaatttcgcagttacctttcatgtgaactatagttattctgtcaatctaatggatatgctattatgaaatttacctgttagagaagcaagaggggttcatttgttgtacatatattccttttggttcctctaaaataagttacacttttatgcagcattcaatattataagttctttctatggatatgaaataccataagccttgttctttgattaggttttgaaagcccttgaaaagctgagaaagaaagctgatgccacacctgaagatatcattcaaatagagaaatggatttctgaggcatacaaagccattgacaagacagtgaaggttggcgccatgcacaggaatactggtaaccatcgcaagtcccttcttgcgaggaggaagaaggccatcgagatactccgtggttggtatgttccaaacgctgaacctgctgctaccagctagtctattgacaaatcgtcttcaggaattcgcagcagattcattgtcaacacgtcttgccaattttggacatgcatatgttgtttaaggaattaaatagctttgttatattctctccattccaagcgatgtgtatacctttggtccatgttatgtgttcatgttcttgctctggaagccttgaaacagaactgggccaatacttttctcccacttctgttatccttcacatcagtgttgtaaaatgacaagctgaaatattttttttctatggtaaggatgttttcaaag</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050394.1 RefSeq:Os01g0678600]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 1]]~~
−	~~[[Category:~~Chromosome 1]]

← Older revision		Revision as of 18:56, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os01g0678600\|		GeneName = Os01g0678600\|