Os01g0869800 - Revision history

Liman at 15:07, 20 December 2016

2016-12-20T15:07:36Z

Liman at 14:42, 20 December 2016

2016-12-20T14:42:12Z

Liman at 14:09, 15 October 2016

2016-10-15T14:09:49Z

192.168.72.52 at 05:03, 14 May 2015

2015-05-14T05:03:29Z

124.16.129.48 at 19:02, 22 July 2012

2012-07-22T19:02:49Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os01g0869800| Description = Similar to Photosystem II subunit PsbS| Version = NM_001051464.1 GI:115441298 GeneID:4324933| Length = 2559 bp| Def..."

2012-06-25T05:12:53Z

Created page with "{{JaponicaGene| GeneName = Os01g0869800| Description = Similar to Photosystem II subunit PsbS| Version = NM_001051464.1 GI:115441298 GeneID:4324933| Length = 2559 bp| Def..."

New page

{{JaponicaGene|
GeneName = Os01g0869800|
Description = Similar to Photosystem II subunit PsbS|
Version = NM_001051464.1 GI:115441298 GeneID:4324933|
Length = 2559 bp|
Definition = Oryza sativa Japonica Group Os01g0869800, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
AP = Chromosome 1:39452871..39455429|
CDS = 39452956..39453153,39453270..39453386,39454766..39455257|
GCID = <gbrowseImage1>
name=NC_008394:39452871..39455429
source=RiceChromosome01
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008394:39452871..39455429
source=RiceChromosome01
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgcagtcgatgctggtgtcgggagccaatggcacggtggccgccgcgagcaccagcaggctgcagcccgtgcggccgacgccgttctcgcggctcgtgctgtcgcagccgtcgtcgtcgctggggcgcgcggtgtccgtcaagacggtggcgctgttcggcaggtccaagaccaaggccgcgcccgcaagaaaggctgagccgaagccaaagttcaagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacgagctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgctcggcgaccgcggcagcttcgtcgacgaccagccggtgacgggcctcgacaaggccgtcatcgccccgggcaagggcttccgctccgcgctgggcctcagcgagggcggcccgctgttcggcttcaccaaggccaacgagctgttcgtcggccggctcgcgcagctcggcatcgccttctccatcatcggcgagatcatcaccggcaagggcgccctcgcgcagctcaacatcgagaccggcgtccccatcaacgagatcgagccgctcgtcctcttcaacgtcgtcttcttcttcatcgccgccatcaaccccggcaccggcaagttcgtcagcgacgacgacgaagagtag</cdnaseq>|
AA = <aaseq>MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGR AVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAML GFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD DQPVTGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEII TGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSDDDEE</aaseq>|
DNA = <dnaseqindica>86..283#400..516#1896..2387#agcacgaggcggcctgagctgaacaccgcatcagcagcagcaagcagctaatcgcgcacgtacgcacaccgcgacccggggcgagatggcgcagtcgatgctggtgtcgggagccaatggcacggtggccgccgcgagcaccagcaggctgcagcccgtgcggccgacgccgttctcgcggctcgtgctgtcgcagccgtcgtcgtcgctggggcgcgcggtgtccgtcaagacggtggcgctgttcggcaggtccaagaccaaggccgcgcccgcaagaaaggttggaatttggatggatgaatgcaagctaaactaagctaagctaagctcgcgtttgttttagtcttatgtttgatggtgctaactattttgtaacgtgtcaacgtgtgtatgtaggctgagccgaagccaaagttcaagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacgagctgttcgtcgggcgtgtcgccatgctcgggtttgccgtaagtagacctttcttggccttctagttatttggtatgcatcatttcttgccatcttggtacgtacctgtgcgttcgggtttgggttagctagctagcaagagcacaagcttaaacgtcaaaagttttgtggttaacggaagcactttacccgggagcgtcatcctttattctataaagggtcacatgttgcataggtagatttgcttccaactacttttttttaaaaaaaaattatagtttttgtcatatattttactttgaattttctgtgcacataaaaatgctatatttctccttagcaaatattgctacttttattttatttttcagtccgagttttgacagcgacattgtttaatctaggccagttagcaactcacatgtataccacacacataactaatgaattatctggatttagtaatataggtattgtaggttttaaaaaattcgtctttcgagcagatatattgtttaatgagtaaattttagagaactataaatttagtgactaaattatcagcttgttgtaacgttagtgacatattatatttcagtttaggaagaagaggggatttctgaaaaaaaaagaatgaatctccttcctgcagcaataacaaagaaaatcattataaatctacaactacgtgaacaacctaacgttaatcctgctgaaacgccgctcagtcggtgcacctgagtcaaaacctcattccaaggtagggcaaatggccatttcatcttcccctttgccctttttagcttgatgggttttaacctcggtgcaccaaccgagtgcgagtagcattctagtcggaacaaacggaacaattagtttcaggccgattttagttacaaactttttcttcaaacttttaacttttctatcacatcaaaactttcctatacaaataatcttacaacttttccgtcacatcgttccaatttcaactataaacttttaagtttagcgtgaactaaacacacccctagtggagtcgaaccaaagtgatgcacttagttgtcggccgatgtggcatgctgctacgatgcacatcttgacattgacgtgtcatgaagacatgttcctccatcttgccacactatatactacctctatgacacgcgatgtccatgtatcaataatattactaggatgtatatgatgttacagatttgtgatattttttttcttttattactgtaacaaactaaaactggttgtaaatgttgtagcacttagatagtttagtcactaaatttacagtgctttaaaatttactctcgtttaataatttgtatagtgtacatgcatgactagcacaatcgatcgttgagtcataccaacctgatgcaaaagcgctcaaactgtgcaggcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgctcggcgaccgcggcagcttcgtcgacgaccagccggtgacgggcctcgacaaggccgtcatcgccccgggcaagggcttccgctccgcgctgggcctcagcgagggcggcccgctgttcggcttcaccaaggccaacgagctgttcgtcggccggctcgcgcagctcggcatcgccttctccatcatcggcgagatcatcaccggcaagggcgccctcgcgcagctcaacatcgagaccggcgtccccatcaacgagatcgagccgctcgtcctcttcaacgtcgtcttcttcttcatcgccgccatcaaccccggcaccggcaagttcgtcagcgacgacgacgaagagtagaattacgaggatcgatcgatctaccgaggtttcgccgccattgttgtgcttgcgcatcattgagactttctttcaagtgtatatgtactgtgtacgtgtaggtgtaaagacgtaccttgtttaattagttgttaattaatgcccatggagaaaattaacgtgagatttagct</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051464.1 RefSeq:Os01g0869800]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 1]]
[[Category:Chromosome 1]]

@@ Line 6: / Line 6: @@
 ===Function===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''qNPQ1-2''''' seems to be responsible for the difference in NPQ capacity between Indica and Japonica.
+* Indica cultivars lack a 2.7-kb region at the point 0.4 kb upstream of the '''''OsPsbS1''''' gene, suggesting evolutionary discrimination of this gene.
 ===Mutation===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* One of the two rice PsbS homologues (OsPsbS1) was found within the qNPQ1-2 region. PsbS protein was not accumulated in the leaf blade of the mutant harboring transferred DNA insertion in OsPsbS1.
+* NPQ capacity increased as '''''OsPsbS1''''' expression increased in a series of transgenic lines ectopically expressing OsPsbS1 in an Indica cultivar.
 ===Expression ===
 ===Evolution===

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os01g0869800 was reported as '''''qNPQ1-2''''' in 2011<ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os01g0869800 <=> qNPQ1-2,OsqNPQ1-2
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+*Institute for Environmental Science and Technology, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama City, Saitama 338-8570, Japan;
 ==References==
 <references>
 * <ref name="ref1">
+Lin F, Chen S, Que Z, et al. The blast resistance gene Pi37 encodes a nucleotide binding site–leucine-rich repeat protein and is a member of a resistance gene cluster on rice chromosome 1[J]. Genetics, 2007, 177(3): 1871-1880.
 </ref>
 </references>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

← Older revision		Revision as of 05:03, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
−	~~GeneName = Os01g0869800\|~~
−	~~Description = Similar to Photosystem II subunit PsbS\|~~
−	~~Version = NM_001051464.1 GI:115441298 GeneID:4324933\|~~
−	~~Length = 2559 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os01g0869800, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 1\|Chromosome 1]]\|~~
−	~~AP = Chromosome 1:39452871..39455429\|~~
−	~~CDS = 39452956..39453153,39453270..39453386,39454766..39455257\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008394:39452871..39455429~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008394:39452871..39455429~~
−	~~source=RiceChromosome01~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcgcagtcgatgctggtgtcgggagccaatggcacggtggccgccgcgagcaccagcaggctgcagcccgtgcggccgacgccgttctcgcggctcgtgctgtcgcagccgtcgtcgtcgctggggcgcgcggtgtccgtcaagacggtggcgctgttcggcaggtccaagaccaaggccgcgcccgcaagaaaggctgagccgaagccaaagttcaagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacgagctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgctcggcgaccgcggcagcttcgtcgacgaccagccggtgacgggcctcgacaaggccgtcatcgccccgggcaagggcttccgctccgcgctgggcctcagcgagggcggcccgctgttcggcttcaccaaggccaacgagctgttcgtcggccggctcgcgcagctcggcatcgccttctccatcatcggcgagatcatcaccggcaagggcgccctcgcgcagctcaacatcgagaccggcgtccccatcaacgagatcgagccgctcgtcctcttcaacgtcgtcttcttcttcatcgccgccatcaaccccggcaccggcaagttcgtcagcgacgacgacgaagagtag</cdnaseq>\|
−	AA = <aaseq>MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGR AVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAML GFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD DQPVTGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEII TGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSDDDEE</aaseq>\|
−	DNA = <dnaseqindica>86..283#400..516#1896..2387#agcacgaggcggcctgagctgaacaccgcatcagcagcagcaagcagctaatcgcgcacgtacgcacaccgcgacccggggcgagatggcgcagtcgatgctggtgtcgggagccaatggcacggtggccgccgcgagcaccagcaggctgcagcccgtgcggccgacgccgttctcgcggctcgtgctgtcgcagccgtcgtcgtcgctggggcgcgcggtgtccgtcaagacggtggcgctgttcggcaggtccaagaccaaggccgcgcccgcaagaaaggttggaatttggatggatgaatgcaagctaaactaagctaagctaagctcgcgtttgttttagtcttatgtttgatggtgctaactattttgtaacgtgtcaacgtgtgtatgtaggctgagccgaagccaaagttcaagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacgagctgttcgtcgggcgtgtcgccatgctcgggtttgccgtaagtagacctttcttggccttctagttatttggtatgcatcatttcttgccatcttggtacgtacctgtgcgttcgggtttgggttagctagctagcaagagcacaagcttaaacgtcaaaagttttgtggttaacggaagcactttacccgggagcgtcatcctttattctataaagggtcacatgttgcataggtagatttgcttccaactacttttttttaaaaaaaaattatagtttttgtcatatattttactttgaattttctgtgcacataaaaatgctatatttctccttagcaaatattgctacttttattttatttttcagtccgagttttgacagcgacattgtttaatctaggccagttagcaactcacatgtataccacacacataactaatgaattatctggatttagtaatataggtattgtaggttttaaaaaattcgtctttcgagcagatatattgtttaatgagtaaattttagagaactataaatttagtgactaaattatcagcttgttgtaacgttagtgacatattatatttcagtttaggaagaagaggggatttctgaaaaaaaaagaatgaatctccttcctgcagcaataacaaagaaaatcattataaatctacaactacgtgaacaacctaacgttaatcctgctgaaacgccgctcagtcggtgcacctgagtcaaaacctcattccaaggtagggcaaatggccatttcatcttcccctttgccctttttagcttgatgggttttaacctcggtgcaccaaccgagtgcgagtagcattctagtcggaacaaacggaacaattagtttcaggccgattttagttacaaactttttcttcaaacttttaacttttctatcacatcaaaactttcctatacaaataatcttacaacttttccgtcacatcgttccaatttcaactataaacttttaagtttagcgtgaactaaacacacccctagtggagtcgaaccaaagtgatgcacttagttgtcggccgatgtggcatgctgctacgatgcacatcttgacattgacgtgtcatgaagacatgttcctccatcttgccacactatatactacctctatgacacgcgatgtccatgtatcaataatattactaggatgtatatgatgttacagatttgtgatattttttttcttttattactgtaacaaactaaaactggttgtaaatgttgtagcacttagatagtttagtcactaaatttacagtgctttaaaatttactctcgtttaataatttgtatagtgtacatgcatgactagcacaatcgatcgttgagtcataccaacctgatgcaaaagcgctcaaactgtgcaggcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgctcggcgaccgcggcagcttcgtcgacgaccagccggtgacgggcctcgacaaggccgtcatcgccccgggcaagggcttccgctccgcgctgggcctcagcgagggcggcccgctgttcggcttcaccaaggccaacgagctgttcgtcggccggctcgcgcagctcggcatcgccttctccatcatcggcgagatcatcaccggcaagggcgccctcgcgcagctcaacatcgagaccggcgtccccatcaacgagatcgagccgctcgtcctcttcaacgtcgtcttcttcttcatcgccgccatcaaccccggcaccggcaagttcgtcagcgacgacgacgaagagtagaattacgaggatcgatcgatctaccgaggtttcgccgccattgttgtgcttgcgcatcattgagactttctttcaagtgtatatgtactgtgtacgtgtaggtgtaaagacgtaccttgtttaattagttgttaattaatgcccatggagaaaattaacgtgagatttagct</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051464.1 RefSeq:Os01g0869800]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 1]]~~
−	~~[[Category:~~Chromosome 1]]

← Older revision		Revision as of 19:02, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os01g0869800\|		GeneName = Os01g0869800\|