Os02g0274000 - Revision history

Liman at 11:32, 20 December 2016

2016-12-20T11:32:48Z

Liman at 11:28, 20 December 2016

2016-12-20T11:28:15Z

Liman at 14:10, 15 October 2016

2016-10-15T14:10:27Z

192.168.72.52 at 06:33, 14 May 2015

2015-05-14T06:33:08Z

124.16.129.48 at 19:12, 22 July 2012

2012-07-22T19:12:53Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os02g0274000| Description = Conserved hypothetical protein| Version = NM_001053070.1 GI:115445510 GeneID:4328996| Length = 4191 bp| Definition ..."

2012-06-25T02:24:31Z

Created page with "{{JaponicaGene| GeneName = Os02g0274000| Description = Conserved hypothetical protein| Version = NM_001053070.1 GI:115445510 GeneID:4328996| Length = 4191 bp| Definition ..."

New page

{{JaponicaGene|
GeneName = Os02g0274000|
Description = Conserved hypothetical protein|
Version = NM_001053070.1 GI:115445510 GeneID:4328996|
Length = 4191 bp|
Definition = Oryza sativa Japonica Group Os02g0274000, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:10023011..10027201|
CDS = 10026557..10026644,10026729..10026961|
GCID = <gbrowseImage1>
name=NC_008395:10023011..10027201
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:10023011..10027201
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>caacagagcgtaagatgcaatgccactcagacccaaagtgctcagcggaaatcttcaactgcaaccgtcaaacgatctgaccccaaaggaaaaactcaggggccaaaattggatgatgggagcggtggttttcctccattccgtttcggcaaaggtggtggtggcggcggaggtggtggaggtggcagcaactacttcggtggattccttctcttcacttgtgtgttgctcctagattacctgaaggagtttgagaaaaacctgattgctcgaaggcaacgcgctggatatgatgcaaacaatgatatgttccaacaataa</cdnaseq>|
AA = <aaseq>QQSVRCNATQTQSAQRKSSTATVKRSDPKGKTQGPKLDDGSGGF PPFRFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFEKNLIARRQRAGYDANND MFQQ</aaseq>|
DNA = <dnaseqindica>3547..3634#3719..3951#cgcctcctccttcgccgccgcctacgacgaggctttcctcctctctcccatcgccttcctcctctcctccctttcctcccaggcggcggcggcgccctcagcagcaggatccaccctcgcgccaccccaggccggccgatccgatccccaacgcgatcttgtggggggcgaggcgcggaaaggtggccgccgaatcgtcgcgtggttggttggttcctaggtgagtgagggggtcaagggttattagagatttcatgatttcatcccgtgggcatgtcatcctgcctgttggagagtttgataaagacgtggtttcgatacttagttggggggggggggaataatttgtgattttagtttggagaatagggtttaatctgccgcagcggttctttgtttttgggaggtaacctgtacaaagatcatgctaatccccttcatgatcatttttttttggttattgggaaattttcctgaaccgtgctccctgtagaaccctgcaaaaacaggatcgtgttgacggcagtggttagcattgttaaaaattggggatcatggttactgttatagatttttttttgttttttacttatgggggtaacactatctgttggataaaatccatcatcttgatgattgttagctgcccaattgtttaaaactaatgggtgtcgggacgattgaggtgttgagcatatggggtgggatctcgactacacttttaaaagcactatggtgatatcggagttgtatgacaagtatcatacttttcaaacctgtgttgtgacttaatccctccgttccatattataagactttccagcattacccacgttcatatagatgttaatgatgtgtctagattcattaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggaggaagtattatttttatatgcatgataacattatccctgagcatactgtgttgtttctcaagcagtcaaatcaggtttgagatgccatgtatttatgcactctgtagtaaatagttatttcattttgcaatcatttggcatggcatttcatttcttttcatatgtgacaatgttatgttgcttgattgtagatcttaaaagtgtcctccatgtcaacacttgtcacgtgctcactgccaggggctgtaaccactcatgcatcaaccaggagatttggaggtaaataattggctttaacatttatatttgtttgctttatagagtaattcatgaattgctgtcctcaacattgtttcatgatttcacaatgtttgtctctcccttactcgttgttaagtgtctttggccctcttctctttgcatcgtgacagttaaaaaaattccacggattgagaatatgtaatacctcattacttcttaaattcatctgtgtttgttgacttgctctcaattttgatgtcctaatagtgcactaagaaaatgtaggtatgtaagcatccatttggactatgcaatatagtatacaaatatgacaagtagcccgaaacctgtctgcctgatccttttgctccttttttttagagcacccttgagtttatgttaagagggttctttagggaaattggtaaactgtttcattttccaaatcataagttcacataacacgtggtttgggaattatgggtcgaaatcacatcattagggcctgtttggcacagctctagctccagctccacccctcctggagctggagctcagccaaacagtttcagctccactaatactgggagtggagttgggtggagctctctcacaaaatgtactagagttgtggagctgggtttaggcagctccacaactccactctagactcaactcctggagtaatatttaggagttggagctgtaccaaacaggcccttagtctcctgatcaggcaccttgtgatcttgttgatcctcttttgccaaacaatgtttcattatgtactaatttttcattataccttctctgggcaggttcacaatttcagacatctcaagctagctgcatctcatttaaaagggaagtgtctgctaaagcagtattaagagtaagttggaatatatcatagattcatatctacctcaatcttcctataaacaaaattaagtgttcaattcctgcaaacaaatttactattttctgtttggttagcttattgtgagttcatgacaataaggcatttgatcaataaccaaattggcatgtatcaccctctttttattatatatgattatatatagattctatagaaaaattgaattaggagttactgttactccctccgacccaaaatatgacaacttaggaccagattggacacccctgtccaaattcgtagtactaggatatgtccaattctgtcctagttgctatattttgggactgaggagtatgaactatgaaatattcatgttaaaatggtttagttcaaaatacagtagataaggattttaccatacttgattggtttattggttatacccttcctagctagtactaatcgtagtgctcaataggtgcatatctcatgggccatggcatgtgcatgctgcatacatttaaagataaggtgctttgaattgttaattagtagataaaactgcatcagtaccactacaattttgatggtatcaacaaaacatttcagtatttcacctctaatatataccagcaagttggtctaaaaattcgaaatacctcttctgttacatttgaaggcaacggtgttagataagggtgatttattgattttgtccttacgtgaatattaaattgttgcactaccaaatctcacatctctccagcagccagtagtagtggccggcggcatcattagtgtcgctggaggtgggcaacaagttaatggagcaaagagacgtgggcggtcaaggcatcagagcgtctgcagcctggccgagacccccacctctgagcggcctcaccatgagggtcagtgtgagcagtgtggctgggctgagagcattggctgtggatgcatacaaccaggctgaggactgcactgccaggtggcctcagatgttgacacaggtcctaggtggagcctaatgagatcaagatcataagaacatgcttttcctggtttcttgcttccctcttagcacggtagattgagcagccaagccaagtagtgtcacctccatgatgaagacagcaagcagtgggtattgcagtcattctgcgtggtaaaaaaaaggggtcaaaaccgaaataggaacaaagcatgacaggggatgtaatgttctgatgttatttattgggatcactgaaactctggtggtatagatgcagttttttcttaatagtagtactaaaagaagcaatattatccctggtacatggtcaatctcaatgattaatatatgttctgaattattcatgatgctttacctccagttactgaacttcaaaactgatgaaagggaaaatgctagcttgcttatctgcatacttcactgtcagatcttctcattgactgcttttttgtgcgaacgctattgacaacagagcgtaagatgcaatgccactcagacccaaagtgctcagcggaaatcttcaactgcaaccgtcaaacgatctgaccccaaaggtagatctgcctctaattgaattttattctataggtggcaggaacgcaatcgcttaatttcactttctgtcctgtgactttcaggaaaaactcaggggccaaaattggatgatgggagcggtggttttcctccattccgtttcggcaaaggtggtggtggcggcggaggtggtggaggtggcagcaactacttcggtggattccttctcttcacttgtgtgttgctcctagattacctgaaggagtttgagaaaaacctgattgctcgaaggcaacgcgctggatatgatgcaaacaatgatatgttccaacaataattgtttaacttgttagcactaccctatctgttgatctgtaaaactctacaagaattcctgccgtgcatgtttatttcgttcacattacccgtagtaaatcatggcttgacctcaccgagaggaagctcagatgcactggacacagctactggaaatgtgagttcagtgctgtggtacatccaaatggaccgtattattgcaggtgttgaaattggaatgctttttggaatgttgaatcgc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053070.1 RefSeq:Os02g0274000]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

@@ Line 23: / Line 23: @@
 <references>
 * <ref name="ref1">
+Itabashi E, Iwata N, Fujii S, et al. The fertility restorer gene, Rf2, for Lead Rice‐type cytoplasmic male sterility of rice encodes a mitochondrial glycine‐rich protein[J]. The plant journal, 2011, 65(3): 359-367.
 </ref>
 </references>

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os02g0274000 was reported as '''''Rf2''''' in 2011<ref name="ref1" /> by researchers from Japan and Australia.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os02g0274000 <=> Rf2, OsRf2
 ===Function===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''Rf2''''' encodes a protein consisting of 152 amino acids with a glycine-rich domain.
+* The fertility of cytoplasmic male sterility (CMS) plants is restored in the presence of a nuclear-encoded '''''fertility restorer (Rf)''''' gene. In Lead Rice-type CMS, discovered in the indica variety ‘Lead Rice’, fertility of the CMS plant is restored by the single nuclear-encoded gene '''''Rf2''''' in a gametophytic manner.
 ===Mutation===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* Replacement of isoleucine by threonine at amino acid 78 of the RF2 protein was considered to be the cause of functional loss in the rf2 allele.
 ===Expression ===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* Expression of '''''Rf2''''' mRNA was detected in developing and mature anthers.
+===Sublocalization===
+* An RF2–GFP fusion was shown to be targeted to mitochondria.
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+* Present address: Agricultural Research Institute, HOKUREN Federation of Agricultural Cooperatives, Higashi-5, Kita-15, Nagamura, Hokkaido 069-1317, Japan.
 ==References==
 <references>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

← Older revision		Revision as of 06:33, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
−	~~GeneName = Os02g0274000\|~~
−	~~Description = Conserved hypothetical protein\|~~
−	~~Version = NM_001053070.1 GI:115445510 GeneID:4328996\|~~
−	~~Length = 4191 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os02g0274000, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 2\|Chromosome 2]]\|~~
−	~~AP = Chromosome 2:10023011..10027201\|~~
−	~~CDS = 10026557..10026644,10026729..10026961\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008395:10023011..10027201~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008395:10023011..10027201~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>caacagagcgtaagatgcaatgccactcagacccaaagtgctcagcggaaatcttcaactgcaaccgtcaaacgatctgaccccaaaggaaaaactcaggggccaaaattggatgatgggagcggtggttttcctccattccgtttcggcaaaggtggtggtggcggcggaggtggtggaggtggcagcaactacttcggtggattccttctcttcacttgtgtgttgctcctagattacctgaaggagtttgagaaaaacctgattgctcgaaggcaacgcgctggatatgatgcaaacaatgatatgttccaacaataa</cdnaseq>\|
−	~~AA = <aaseq>QQSVRCNATQTQSAQRKSSTATVKRSDPKGKTQGPKLDDGSGGF PPFRFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFEKNLIARRQRAGYDANND MFQQ</aaseq>\|~~
−	DNA = <dnaseqindica>3547..3634#3719..3951#cgcctcctccttcgccgccgcctacgacgaggctttcctcctctctcccatcgccttcctcctctcctccctttcctcccaggcggcggcggcgccctcagcagcaggatccaccctcgcgccaccccaggccggccgatccgatccccaacgcgatcttgtggggggcgaggcgcggaaaggtggccgccgaatcgtcgcgtggttggttggttcctaggtgagtgagggggtcaagggttattagagatttcatgatttcatcccgtgggcatgtcatcctgcctgttggagagtttgataaagacgtggtttcgatacttagttggggggggggggaataatttgtgattttagtttggagaatagggtttaatctgccgcagcggttctttgtttttgggaggtaacctgtacaaagatcatgctaatccccttcatgatcatttttttttggttattgggaaattttcctgaaccgtgctccctgtagaaccctgcaaaaacaggatcgtgttgacggcagtggttagcattgttaaaaattggggatcatggttactgttatagatttttttttgttttttacttatgggggtaacactatctgttggataaaatccatcatcttgatgattgttagctgcccaattgtttaaaactaatgggtgtcgggacgattgaggtgttgagcatatggggtgggatctcgactacacttttaaaagcactatggtgatatcggagttgtatgacaagtatcatacttttcaaacctgtgttgtgacttaatccctccgttccatattataagactttccagcattacccacgttcatatagatgttaatgatgtgtctagattcattaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggaggaagtattatttttatatgcatgataacattatccctgagcatactgtgttgtttctcaagcagtcaaatcaggtttgagatgccatgtatttatgcactctgtagtaaatagttatttcattttgcaatcatttggcatggcatttcatttcttttcatatgtgacaatgttatgttgcttgattgtagatcttaaaagtgtcctccatgtcaacacttgtcacgtgctcactgccaggggctgtaaccactcatgcatcaaccaggagatttggaggtaaataattggctttaacatttatatttgtttgctttatagagtaattcatgaattgctgtcctcaacattgtttcatgatttcacaatgtttgtctctcccttactcgttgttaagtgtctttggccctcttctctttgcatcgtgacagttaaaaaaattccacggattgagaatatgtaatacctcattacttcttaaattcatctgtgtttgttgacttgctctcaattttgatgtcctaatagtgcactaagaaaatgtaggtatgtaagcatccatttggactatgcaatatagtatacaaatatgacaagtagcccgaaacctgtctgcctgatccttttgctccttttttttagagcacccttgagtttatgttaagagggttctttagggaaattggtaaactgtttcattttccaaatcataagttcacataacacgtggtttgggaattatgggtcgaaatcacatcattagggcctgtttggcacagctctagctccagctccacccctcctggagctggagctcagccaaacagtttcagctccactaatactgggagtggagttgggtggagctctctcacaaaatgtactagagttgtggagctgggtttaggcagctccacaactccactctagactcaactcctggagtaatatttaggagttggagctgtaccaaacaggcccttagtctcctgatcaggcaccttgtgatcttgttgatcctcttttgccaaacaatgtttcattatgtactaatttttcattataccttctctgggcaggttcacaatttcagacatctcaagctagctgcatctcatttaaaagggaagtgtctgctaaagcagtattaagagtaagttggaatatatcatagattcatatctacctcaatcttcctataaacaaaattaagtgttcaattcctgcaaacaaatttactattttctgtttggttagcttattgtgagttcatgacaataaggcatttgatcaataaccaaattggcatgtatcaccctctttttattatatatgattatatatagattctatagaaaaattgaattaggagttactgttactccctccgacccaaaatatgacaacttaggaccagattggacacccctgtccaaattcgtagtactaggatatgtccaattctgtcctagttgctatattttgggactgaggagtatgaactatgaaatattcatgttaaaatggtttagttcaaaatacagtagataaggattttaccatacttgattggtttattggttatacccttcctagctagtactaatcgtagtgctcaataggtgcatatctcatgggccatggcatgtgcatgctgcatacatttaaagataaggtgctttgaattgttaattagtagataaaactgcatcagtaccactacaattttgatggtatcaacaaaacatttcagtatttcacctctaatatataccagcaagttggtctaaaaattcgaaatacctcttctgttacatttgaaggcaacggtgttagataagggtgatttattgattttgtccttacgtgaatattaaattgttgcactaccaaatctcacatctctccagcagccagtagtagtggccggcggcatcattagtgtcgctggaggtgggcaacaagttaatggagcaaagagacgtgggcggtcaaggcatcagagcgtctgcagcctggccgagacccccacctctgagcggcctcaccatgagggtcagtgtgagcagtgtggctgggctgagagcattggctgtggatgcatacaaccaggctgaggactgcactgccaggtggcctcagatgttgacacaggtcctaggtggagcctaatgagatcaagatcataagaacatgcttttcctggtttcttgcttccctcttagcacggtagattgagcagccaagccaagtagtgtcacctccatgatgaagacagcaagcagtgggtattgcagtcattctgcgtggtaaaaaaaaggggtcaaaaccgaaataggaacaaagcatgacaggggatgtaatgttctgatgttatttattgggatcactgaaactctggtggtatagatgcagttttttcttaatagtagtactaaaagaagcaatattatccctggtacatggtcaatctcaatgattaatatatgttctgaattattcatgatgctttacctccagttactgaacttcaaaactgatgaaagggaaaatgctagcttgcttatctgcatacttcactgtcagatcttctcattgactgcttttttgtgcgaacgctattgacaacagagcgtaagatgcaatgccactcagacccaaagtgctcagcggaaatcttcaactgcaaccgtcaaacgatctgaccccaaaggtagatctgcctctaattgaattttattctataggtggcaggaacgcaatcgcttaatttcactttctgtcctgtgactttcaggaaaaactcaggggccaaaattggatgatgggagcggtggttttcctccattccgtttcggcaaaggtggtggtggcggcggaggtggtggaggtggcagcaactacttcggtggattccttctcttcacttgtgtgttgctcctagattacctgaaggagtttgagaaaaacctgattgctcgaaggcaacgcgctggatatgatgcaaacaatgatatgttccaacaataattgtttaacttgttagcactaccctatctgttgatctgtaaaactctacaagaattcctgccgtgcatgtttatttcgttcacattacccgtagtaaatcatggcttgacctcaccgagaggaagctcagatgcactggacacagctactggaaatgtgagttcagtgctgtggtacatccaaatggaccgtattattgcaggtgttgaaattggaatgctttttggaatgttgaatcgc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053070.1 RefSeq:Os02g0274000]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 2]]~~
−	~~[[Category:~~Chromosome 2]]

← Older revision		Revision as of 19:12, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os02g0274000\|		GeneName = Os02g0274000\|