Os02g0531600 - Revision history

Xysj2018 at 01:06, 17 February 2017

2017-02-17T01:06:47Z

Xysj1985: /* Function */

2016-10-16T04:55:01Z

‎Function

Xysj1985 at 04:54, 16 October 2016

2016-10-16T04:54:41Z

Xysj1985 at 04:52, 16 October 2016

2016-10-16T04:52:55Z

192.168.72.52 at 06:38, 14 May 2015

2015-05-14T06:38:27Z

124.16.129.48 at 19:16, 22 July 2012

2012-07-22T19:16:23Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os02g0531600| Description = PEBP family protein| Version = NM_001186077.1 GI:297721286 GeneID:9266285| Length = 1165 bp| Definition = Oryza sat..."

2012-06-25T02:33:25Z

Created page with "{{JaponicaGene| GeneName = Os02g0531600| Description = PEBP family protein| Version = NM_001186077.1 GI:297721286 GeneID:9266285| Length = 1165 bp| Definition = Oryza sat..."

New page

{{JaponicaGene|
GeneName = Os02g0531600|
Description = PEBP family protein|
Version = NM_001186077.1 GI:297721286 GeneID:9266285|
Length = 1165 bp|
Definition = Oryza sativa Japonica Group Os02g0531600, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:20425494..20426658|
CDS = 20425494..20425711,20425977..20426017,20426279..20426340,20426458..20426658|
GCID = <gbrowseImage1>
name=NC_008395:20425494..20426658
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:20425494..20426658
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgtcgagggtgctggagcctctcattgtggggaaggtgatcggcgaggtgctggacaacttcaaccccacggtgaagatgacggccacctacggcgccaacaagcaggtgttcaacggccacgagttcttcccctccgccgtcgccggcaagccgcgcgtcgaggtccagggcggcgacctcaggtccttcttcacattggtgatgactgaccctgatgtgccagggcctagtgatccatacctgagggagcatcttcactggattgttactgatattcctgggactactgatgcctcttttgggagggaggtggtgagctacgagagcccgcggccaaacatcggcatccacaggttcatcctggtgctgttccggcagaagcgccggcaggcggtgagcccgccgccgtcgagggaccgcttcagcacccgccagttcgccgaggacaacgacctcggcctccccgtcgccgccgtctacttcaacgcgcagcgcgagaccgccgctcgccgccgctaa</cdnaseq>|
AA = <aaseq>MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFF PSAVAGKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFG REVVSYESPRPNIGIHRFILVLFRQKRRQAVSPPPSRDRFSTRQFAEDNDLGLPVAAV YFNAQRETAARRR</aaseq>|
DNA = <dnaseqindica>948..1165#642..682#319..380#1..201#atgtcgagggtgctggagcctctcattgtggggaaggtgatcggcgaggtgctggacaacttcaaccccacggtgaagatgacggccacctacggcgccaacaagcaggtgttcaacggccacgagttcttcccctccgccgtcgccggcaagccgcgcgtcgaggtccagggcggcgacctcaggtccttcttcacattggtgcgtatgcctgtctcatctgctgctggattcatcagactatcgcacatctatactgtaatatgtatgtgtccattatgtgctaattgatcctttgtacttgtgtgcttaattcaggtgatgactgaccctgatgtgccagggcctagtgatccatacctgagggagcatcttcactggtaatttatactactacctgtacaagttaatattgctcggtcttattcaagttgattagacattattaggtacaagtgtcacctacatagccagacaaatttgtataggtggtcactggtcacgccatgattgattgcttgcaaagattctgtcatgcatgctgttaatcattgtttttccagattaattttcaatcaatgcattctatagagtatgtgtagctaatcaggtgaccttttgattggaccaccttgctgcaggattgttactgatattcctgggactactgatgcctcttttggtaagcctttcccctgtacatcctgctttagtctttgccagttttgaaccttgatgagaattgactgatcagagagatccagagtgaacaattagccacaatacaaggtcaattaatttgtggtaaactggtaatgtagtaactattttttttttaaaaaaaatatgtactaattaatcaaaacaatatttatttgtcttatctaggttatagctttctctgatctctctataattaattttgtgtgtgatcaatggtgatgcagggagggaggtggtgagctacgagagcccgcggccaaacatcggcatccacaggttcatcctggtgctgttccggcagaagcgccggcaggcggtgagcccgccgccgtcgagggaccgcttcagcacccgccagttcgccgaggacaacgacctcggcctccccgtcgccgccgtctacttcaacgcgcagcgcgagaccgccgctcgccgccgctaa</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001186077.1 RefSeq:Os02g0531600]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

@@ Line 4: / Line 4: @@
 [[File:94-Os02g0531600-1.png|right|thumb|427px|'''Figure 1.''' ''Morphological characterization of the wild type and dp2 mutant.<ref name="ref1" />.'']]
 ===Gene Symbol===
-*'''''Os04g0459000''''' '''''<=>''''' '''''OsRCN2,OsDP2''''','''''RCN2,DP2'''''
+*'''''Os02g0531600''''' '''''<=>''''' '''''OsRCN2,OsDP2''''','''''RCN2,DP2'''''
 ===Function===
 *Overexpression of '''''RCN1''''' and '''''RCN2''''' retarded the transition from vegetative to reproductive development in the SAM of rice

@@ Line 6: / Line 6: @@
 *'''''Os04g0459000''''' '''''<=>''''' '''''OsRCN2,OsDP2''''','''''RCN2,DP2'''''
 ===Function===
-*Overexpression of '''''RCN1''''' and '''''RCN2''''' retarded the transition from vegetative to reproductive development in the SAM
+*Overexpression of '''''RCN1''''' and '''''RCN2''''' retarded the transition from vegetative to reproductive development in the SAM of rice
 ===Phenotypic analysis===

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Gene Symbol===
 *'''''Os04g0459000''''' '''''<=>''''' '''''OsRCN2,OsDP2''''','''''RCN2,DP2'''''

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os02g0531600''''' was reported as '''''RCN2''''' and '''''DP2''''' in 2002 <ref name="ref1" /> and 2014 <ref name="ref2" /> by researchers from Japan and China.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+*Overexpression of '''''RCN1''''' and '''''RCN2''''' retarded the transition from vegetative to reproductive development in the SAM
-===Expression===
+===Phenotypic analysis===
-Please input expression information here.
+* A dense panicle mutant ('''''dp2''''') derived from the Oryza sativa ssp. japonica cultivar Nipponbare through ethyl methane sulfonate mutagenesis was used in present study.
+* The dp2 mutant did not exhibit a visibly abnormal phenotype during early vegetative growth stages compared to the wild type. After completely development, the panicle of the dp2 mutant became very dense in appearance, which was significantly different from the panicle of the wild type
-===Evolution===
+* Compared to the wild type, the panicle of '''''dp2''''' mutant exhibited more branches and denser grains. Further more, the number of spikelets per panicle, number of primary branches and secondary branches of dp2 mutant were significantly increased while the panicle length, and 1,000-grain weight were significantly decreased.
-Please input evolution information here.
+* The results from the genetic analysis indicated that the dense panicle phenotype was controlled by a single dominance nuclear gene.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* Nara Institute of Science and Technology, Takayama 8916-5, Ikoma, Nara 630-0101, Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

← Older revision		Revision as of 06:38, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
−	~~GeneName = Os02g0531600\|~~
−	~~Description = PEBP family protein\|~~
−	~~Version = NM_001186077.1 GI:297721286 GeneID:9266285\|~~
−	~~Length = 1165 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os02g0531600, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 2\|Chromosome 2]]\|~~
−	~~AP = Chromosome 2:20425494..20426658\|~~
−	~~CDS = 20425494..20425711,20425977..20426017,20426279..20426340,20426458..20426658\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008395:20425494..20426658~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008395:20425494..20426658~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgtcgagggtgctggagcctctcattgtggggaaggtgatcggcgaggtgctggacaacttcaaccccacggtgaagatgacggccacctacggcgccaacaagcaggtgttcaacggccacgagttcttcccctccgccgtcgccggcaagccgcgcgtcgaggtccagggcggcgacctcaggtccttcttcacattggtgatgactgaccctgatgtgccagggcctagtgatccatacctgagggagcatcttcactggattgttactgatattcctgggactactgatgcctcttttgggagggaggtggtgagctacgagagcccgcggccaaacatcggcatccacaggttcatcctggtgctgttccggcagaagcgccggcaggcggtgagcccgccgccgtcgagggaccgcttcagcacccgccagttcgccgaggacaacgacctcggcctccccgtcgccgccgtctacttcaacgcgcagcgcgagaccgccgctcgccgccgctaa</cdnaseq>\|
−	AA = <aaseq>MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFF PSAVAGKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFG REVVSYESPRPNIGIHRFILVLFRQKRRQAVSPPPSRDRFSTRQFAEDNDLGLPVAAV YFNAQRETAARRR</aaseq>\|
−	DNA = <dnaseqindica>948..1165#642..682#319..380#1..201#atgtcgagggtgctggagcctctcattgtggggaaggtgatcggcgaggtgctggacaacttcaaccccacggtgaagatgacggccacctacggcgccaacaagcaggtgttcaacggccacgagttcttcccctccgccgtcgccggcaagccgcgcgtcgaggtccagggcggcgacctcaggtccttcttcacattggtgcgtatgcctgtctcatctgctgctggattcatcagactatcgcacatctatactgtaatatgtatgtgtccattatgtgctaattgatcctttgtacttgtgtgcttaattcaggtgatgactgaccctgatgtgccagggcctagtgatccatacctgagggagcatcttcactggtaatttatactactacctgtacaagttaatattgctcggtcttattcaagttgattagacattattaggtacaagtgtcacctacatagccagacaaatttgtataggtggtcactggtcacgccatgattgattgcttgcaaagattctgtcatgcatgctgttaatcattgtttttccagattaattttcaatcaatgcattctatagagtatgtgtagctaatcaggtgaccttttgattggaccaccttgctgcaggattgttactgatattcctgggactactgatgcctcttttggtaagcctttcccctgtacatcctgctttagtctttgccagttttgaaccttgatgagaattgactgatcagagagatccagagtgaacaattagccacaatacaaggtcaattaatttgtggtaaactggtaatgtagtaactattttttttttaaaaaaaatatgtactaattaatcaaaacaatatttatttgtcttatctaggttatagctttctctgatctctctataattaattttgtgtgtgatcaatggtgatgcagggagggaggtggtgagctacgagagcccgcggccaaacatcggcatccacaggttcatcctggtgctgttccggcagaagcgccggcaggcggtgagcccgccgccgtcgagggaccgcttcagcacccgccagttcgccgaggacaacgacctcggcctccccgtcgccgccgtctacttcaacgcgcagcgcgagaccgccgctcgccgccgctaa</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001186077.1 RefSeq:Os02g0531600]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 2]]~~
−	~~[[Category:~~Chromosome 2]]

← Older revision		Revision as of 19:16, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os02g0531600\|		GeneName = Os02g0531600\|