Os02g0612300 - Revision history

Guangyi at 07:01, 12 December 2016

2016-12-12T07:01:08Z

Guangyi at 06:57, 12 December 2016

2016-12-12T06:57:20Z

192.168.72.52 at 06:42, 14 May 2015

2015-05-14T06:42:46Z

124.16.129.48 at 19:18, 22 July 2012

2012-07-22T19:18:49Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os02g0612300| Description = Similar to Nuclear cap binding protein subunit 2 (20 kDa nuclear cap binding protein) (NCBP 20 kDa subunit) (CBP20)| ..."

2012-06-25T02:40:48Z

Created page with "{{JaponicaGene| GeneName = Os02g0612300| Description = Similar to Nuclear cap binding protein subunit 2 (20 kDa nuclear cap binding protein) (NCBP 20 kDa subunit) (CBP20)| ..."

New page

{{JaponicaGene|
GeneName = Os02g0612300|
Description = Similar to Nuclear cap binding protein subunit 2 (20 kDa nuclear cap binding protein) (NCBP 20 kDa subunit) (CBP20)|
Version = NM_001053947.1 GI:115447264 GeneID:4329963|
Length = 3313 bp|
Definition = Oryza sativa Japonica Group Os02g0612300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:24958019..24961331|
CDS = 24958299..24958376,24958472..24958557,24958635..24958688,24959196..24959294,24959534..24959567<br>,24959656..24959794,24960812..24961035,24961142..24961159|
GCID = <gbrowseImage1>
name=NC_008395:24958019..24961331
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:24958019..24961331
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgtccctcttcaaggacccgaccaagctgtccgcgtaccgggacaggcggttcaccgggacgcaggaggagtacgaggcggcgctgcaggcgtcggtgacggtgtacgtcgggaacatgtccttctacaccacggaggagcaggcctatgagctcttctcccgcgccggcgagatcaggaagatcatcatgggactcgacaagaactccaagaccccctgcggcttctgcttcatactgtactactccagggaggatgctgaagatgcggtcaaatatattagtggaacaatgcttgatgatcgcccaattcgtgttgattttgattggggctttgaagaaggcagacaatggggtcgtggacggagtggtggacaagtaagggatgagtaccgcacggactacgatcctggaagaggtggctatggtaagatggttcagaaagagctagaagcacaacgtgagttagttgactatggaggtgcttttcaacctaatgcaccacctcaatatgacagaggtgacaggaagagagggtatggagattcttaccggaacgacagagattaccaacggaaacgttaccggaacgatgagcgatcgtcgcaaagagcacctgactctgagttcaagagagatgcgattgattcggagaagaatcctaggtttcgtgagaaaggtgattctgatgaagaagacgatgattatgataagagacgccggcgctga</cdnaseq>|
AA = <aaseq>MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFY TTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDD RPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDY GGAFQPNAPPQYDRGDRKRGYGDSYRNDRDYQRKRYRNDERSSQRAPDSEFKRDAIDS EKNPRFREKGDSDEEDDDYDKRRRR</aaseq>|
DNA = <dnaseqindica>2956..3033#2775..2860#2644..2697#2038..2136#1765..1798#1538..1676#297..520#173..190#cctggaggctgcagctcctggcctcccgggcaactagggttcggcaaatcccccgcaaggagggtgaaacccttccccaaaactccccaatccccacccgaccttcttcgaaatcggaggcaaaaccctaatcgcaaacagctcgtcctcgcgcggccgccgctccgcagcaatggcgtccctcttcaaggtacggattccccccccccccctccgaaaccctagctacccgagctcgtcgattccccctcctctcgcccttcctctgaggcggctcgcccgattcgcttttccaggacccgaccaagctgtccgcgtaccgggacaggcggttcaccgggacgcaggaggagtacgaggcggcgctgcaggcgtcggtgacggtgtacgtcgggaacatgtccttctacaccacggaggagcaggcctatgagctcttctcccgcgccggcgagatcaggaagatcatcatgggactcgacaagaactccaagaccccctgcggcttctgcttcatactgtaccctctcctttccttcctcaatccgttttttttttaatacaagagatgtagtttggtgctatgttcaaattaaaggtgctgcttctgttttattctagtataagcgggtgtccaaatgtagtttggtgccttttaagatgtttttctagttctagttatgcattgatttaacagtgaagtatcaatggtggttgtgacttgtgacagagaagctaagggagttttaggagtctgatgttgtgttggtactggcaggaatgtgtgattttccctagaatacgggcagcaaagaattctatctcagtgcgaatatttggcttgagcagttagatattgctattggttaagtgagtaattttgtagtagtgagctcatatgtggctccttggagagctggttttggtccgctagtatgggccaatatagtgcaccaagtttcttgttttttaccctttgtttggttacttttaatctgatgtagtgttgattagtccgcaatatggtccagatgtgtcttggttgtcgagggggcatggtttaagttatatttggccaactggtgatttttgagagtctattgggatcttttttatgtattcaggctcttgttttggtgttttgtgttcgaatttggggttttgtatgctggtagttagccatactttgtacctctaattcgaaatgtggcatcatcttgatctctgatctgttaaggttagagtatgtcttttttgttcattcaaaaaatatataccacagttcctttaactggtgtgcgtgtcttggattcctggcagcaaggcaccccttgaattatcaatcttctattaaccttacagttatggaagggattattctctgataggcatatattgctttattgtcttgtgcatcgggcatgttgttagtttatattggattttggaagatgtaaaaatgacatttatctagtttgagccaacggtgtatgtgctgttagcctacatatcgttataataccttccttcctttcaggtactactccagggaggatgctgaagatgcggtcaaatatattagtggaacaatgcttgatgatcgcccaattcgtgttgattttgattggggctttgaagaaggcagacaatggggtcgtggacggagtggtggacaagtattaccatgatcttattctgcatgaataacaaatgtatgacatttgaccatatttttgatgatagttcatgtttcttttttcataggtaagggatgagtaccgcacggactacgatcctgatatcctttggtactattgaattaccatttattacatttagagcggggttatgctggtaactcagaaacccatccgtgttagttcatactgatgaaaatgttacctgtagatccatcctaaatatggcaattcaactatctgctgattgtttcttaatagcgctcctttaaattttgtatgcctttacatgctgctatgttttttctgttgagttggctacttccttaatgaatcttacgaagaggtggctatggtaagatggttcagaaagagctagaagcacaacgtgagttagttgactatggaggtgcttttcaacctaatgcaccacctcaatgtaagtgctgaaagttttgaggactgtaccttaagcctttaactacatccttgtataattttcatttgtgttaaccttattaactgcagtaattgctttgttagagatttgcatgtgtggcctcttgatatatttttcaattggaagtattttatggtgaaacaatttgctttataactggtccgatcatatttacatgaagttagcattcatgcataatgtagcctttttttattctagtaaagcataattagacattacctttttctctggtgaccatgtgtgcctttccactattgactctgatctcacttgttaactttagctgcattttaccttgtcgtttgccaccaaaaagcgttggttgagagtttggttcactgctttatttgattcaatccttggcagcataccgtccaatcaatttactgtttatcttctgtccaaacatgttcctgattatatttcatcattttcacaaatcttggcattttttgaaatatgcagatgacagaggtgacaggaagagagggtatggagattcttaccggaacgacagaggtcgcacatctcgcatattcttgttcttttctttcccctgaactaatagctaacacaatctggtgtgctgccaccagattaccaacggaaacgttaccggaacgatgagcgatcgtcgcaaagagcacctgactctgagttcaagagagatgcgattgattcggtattagagcctgcatacgtgtcatctggcttttcctgtactaccccttcggaaaaacaatatgtttacaaaatatctcgtggttatgtttgcaggagaagaatcctaggtttcgtgagaaaggtgattctgatgaagaagacgatgattatgataagagacgccggcgctgaactgaaagaaacaattgctgataaatgcaaatgggcagttgcagtgactacactagtaaagcccgtcgagcttatgttttttaccctgttgtgtaccatatgacttatatatctgtcgtcagctcatttctatgttgcggttcatcaccacatgcttgcataggtctcgcatgcgactgggaatggattttgtgtttattgacacttcagcttatgtattgacctgttatttaggttggcaactaattgattttggtcggtaacaattaccttgcgaact</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053947.1 RefSeq:Os02g0612300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

@@ Line 1: / Line 1: @@
-The rice '''Os08g0189200''' was reported as '''	OsGLP8''' in 2009 <ref name="ref1" /> by researchers from the USA.
+The rice '''Os02g0612300''' was reported as '''	du3''' in 2008 <ref name="ref1" /> by researchers from the Japan.
 <br>
 ==Annotated Information==
 ===Gene Symbol===
-*'''Os08g0189200 <=> 	OsGLP8'''
+*'''Os02g0612300 <=> 	du3'''
 <br>
 ===Function===
-Please input function information here.
+*Transient expression of green fluorescent protein (GFP)-tagged '''Du3''' proteins in rice protoplasts resulted in localization to the nucleus showing a speckled pattern similar to the pattern displayed by other splicing factors.
+<br>
 ===Expression===
-Please input expression information here.
+*The '''du3''' mutant has also reduced the splicing efficiency of Wxb pre-mRNA. Furthermore, map-based cloning revealed that '''Du3''' encodes the rice homolog of a cap-binding protein 20 kD subunit (CBP20), a component of the heterodimeric nuclear cap-binding complex (CBC) playing a role in pre-mRNA splicing, RNA nuclear export, and nonsense-mediated decay.
+<br>
 ==Labs working on this gene==
 *Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, Nara 630-0101, Japan;

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os08g0189200''' was reported as '''	OsGLP8''' in 2009 <ref name="ref1" /> by researchers from the USA.
+<br>
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 14: / Line 17: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, Nara 630-0101, Japan;
-==References==
+</references>
-Please input cited references here.
+<br>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

← Older revision		Revision as of 06:42, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
−	~~GeneName = Os02g0612300\|~~
−	~~Description = Similar to Nuclear cap binding protein subunit 2 (20 kDa nuclear cap binding protein) (NCBP 20 kDa subunit) (CBP20)\|~~
−	~~Version = NM_001053947.1 GI:115447264 GeneID:4329963\|~~
−	~~Length = 3313 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os02g0612300, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 2\|Chromosome 2]]\|~~
−	~~AP = Chromosome 2:24958019..24961331\|~~
−	~~CDS = 24958299..24958376,24958472..24958557,24958635..24958688,24959196..24959294,24959534..24959567<br>,24959656..24959794,24960812..24961035,24961142..24961159\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008395:24958019..24961331~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008395:24958019..24961331~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcgtccctcttcaaggacccgaccaagctgtccgcgtaccgggacaggcggttcaccgggacgcaggaggagtacgaggcggcgctgcaggcgtcggtgacggtgtacgtcgggaacatgtccttctacaccacggaggagcaggcctatgagctcttctcccgcgccggcgagatcaggaagatcatcatgggactcgacaagaactccaagaccccctgcggcttctgcttcatactgtactactccagggaggatgctgaagatgcggtcaaatatattagtggaacaatgcttgatgatcgcccaattcgtgttgattttgattggggctttgaagaaggcagacaatggggtcgtggacggagtggtggacaagtaagggatgagtaccgcacggactacgatcctggaagaggtggctatggtaagatggttcagaaagagctagaagcacaacgtgagttagttgactatggaggtgcttttcaacctaatgcaccacctcaatatgacagaggtgacaggaagagagggtatggagattcttaccggaacgacagagattaccaacggaaacgttaccggaacgatgagcgatcgtcgcaaagagcacctgactctgagttcaagagagatgcgattgattcggagaagaatcctaggtttcgtgagaaaggtgattctgatgaagaagacgatgattatgataagagacgccggcgctga</cdnaseq>\|
−	AA = <aaseq>MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFY TTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDD RPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDY GGAFQPNAPPQYDRGDRKRGYGDSYRNDRDYQRKRYRNDERSSQRAPDSEFKRDAIDS EKNPRFREKGDSDEEDDDYDKRRRR</aaseq>\|
−	DNA = <dnaseqindica>2956..3033#2775..2860#2644..2697#2038..2136#1765..1798#1538..1676#297..520#173..190#cctggaggctgcagctcctggcctcccgggcaactagggttcggcaaatcccccgcaaggagggtgaaacccttccccaaaactccccaatccccacccgaccttcttcgaaatcggaggcaaaaccctaatcgcaaacagctcgtcctcgcgcggccgccgctccgcagcaatggcgtccctcttcaaggtacggattccccccccccccctccgaaaccctagctacccgagctcgtcgattccccctcctctcgcccttcctctgaggcggctcgcccgattcgcttttccaggacccgaccaagctgtccgcgtaccgggacaggcggttcaccgggacgcaggaggagtacgaggcggcgctgcaggcgtcggtgacggtgtacgtcgggaacatgtccttctacaccacggaggagcaggcctatgagctcttctcccgcgccggcgagatcaggaagatcatcatgggactcgacaagaactccaagaccccctgcggcttctgcttcatactgtaccctctcctttccttcctcaatccgttttttttttaatacaagagatgtagtttggtgctatgttcaaattaaaggtgctgcttctgttttattctagtataagcgggtgtccaaatgtagtttggtgccttttaagatgtttttctagttctagttatgcattgatttaacagtgaagtatcaatggtggttgtgacttgtgacagagaagctaagggagttttaggagtctgatgttgtgttggtactggcaggaatgtgtgattttccctagaatacgggcagcaaagaattctatctcagtgcgaatatttggcttgagcagttagatattgctattggttaagtgagtaattttgtagtagtgagctcatatgtggctccttggagagctggttttggtccgctagtatgggccaatatagtgcaccaagtttcttgttttttaccctttgtttggttacttttaatctgatgtagtgttgattagtccgcaatatggtccagatgtgtcttggttgtcgagggggcatggtttaagttatatttggccaactggtgatttttgagagtctattgggatcttttttatgtattcaggctcttgttttggtgttttgtgttcgaatttggggttttgtatgctggtagttagccatactttgtacctctaattcgaaatgtggcatcatcttgatctctgatctgttaaggttagagtatgtcttttttgttcattcaaaaaatatataccacagttcctttaactggtgtgcgtgtcttggattcctggcagcaaggcaccccttgaattatcaatcttctattaaccttacagttatggaagggattattctctgataggcatatattgctttattgtcttgtgcatcgggcatgttgttagtttatattggattttggaagatgtaaaaatgacatttatctagtttgagccaacggtgtatgtgctgttagcctacatatcgttataataccttccttcctttcaggtactactccagggaggatgctgaagatgcggtcaaatatattagtggaacaatgcttgatgatcgcccaattcgtgttgattttgattggggctttgaagaaggcagacaatggggtcgtggacggagtggtggacaagtattaccatgatcttattctgcatgaataacaaatgtatgacatttgaccatatttttgatgatagttcatgtttcttttttcataggtaagggatgagtaccgcacggactacgatcctgatatcctttggtactattgaattaccatttattacatttagagcggggttatgctggtaactcagaaacccatccgtgttagttcatactgatgaaaatgttacctgtagatccatcctaaatatggcaattcaactatctgctgattgtttcttaatagcgctcctttaaattttgtatgcctttacatgctgctatgttttttctgttgagttggctacttccttaatgaatcttacgaagaggtggctatggtaagatggttcagaaagagctagaagcacaacgtgagttagttgactatggaggtgcttttcaacctaatgcaccacctcaatgtaagtgctgaaagttttgaggactgtaccttaagcctttaactacatccttgtataattttcatttgtgttaaccttattaactgcagtaattgctttgttagagatttgcatgtgtggcctcttgatatatttttcaattggaagtattttatggtgaaacaatttgctttataactggtccgatcatatttacatgaagttagcattcatgcataatgtagcctttttttattctagtaaagcataattagacattacctttttctctggtgaccatgtgtgcctttccactattgactctgatctcacttgttaactttagctgcattttaccttgtcgtttgccaccaaaaagcgttggttgagagtttggttcactgctttatttgattcaatccttggcagcataccgtccaatcaatttactgtttatcttctgtccaaacatgttcctgattatatttcatcattttcacaaatcttggcattttttgaaatatgcagatgacagaggtgacaggaagagagggtatggagattcttaccggaacgacagaggtcgcacatctcgcatattcttgttcttttctttcccctgaactaatagctaacacaatctggtgtgctgccaccagattaccaacggaaacgttaccggaacgatgagcgatcgtcgcaaagagcacctgactctgagttcaagagagatgcgattgattcggtattagagcctgcatacgtgtcatctggcttttcctgtactaccccttcggaaaaacaatatgtttacaaaatatctcgtggttatgtttgcaggagaagaatcctaggtttcgtgagaaaggtgattctgatgaagaagacgatgattatgataagagacgccggcgctgaactgaaagaaacaattgctgataaatgcaaatgggcagttgcagtgactacactagtaaagcccgtcgagcttatgttttttaccctgttgtgtaccatatgacttatatatctgtcgtcagctcatttctatgttgcggttcatcaccacatgcttgcataggtctcgcatgcgactgggaatggattttgtgtttattgacacttcagcttatgtattgacctgttatttaggttggcaactaattgattttggtcggtaacaattaccttgcgaact</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053947.1 RefSeq:Os02g0612300]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 2]]~~
−	~~[[Category:~~Chromosome 2]]

← Older revision		Revision as of 19:18, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os02g0612300\|		GeneName = Os02g0612300\|