Os02g0654700 - Revision history

Xysj2012: /* Structured Information */

2015-05-14T05:49:46Z

‎Structured Information

Zhangye at 07:38, 28 February 2015

2015-02-28T07:38:05Z

124.16.129.48 at 19:20, 22 July 2012

2012-07-22T19:20:07Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os02g0654700| Description = Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5..."

2012-06-25T02:44:44Z

Created page with "{{JaponicaGene| GeneName = Os02g0654700| Description = Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5..."

New page

{{JaponicaGene|
GeneName = Os02g0654700|
Description = Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5)|
Version = NM_001054149.1 GI:115447668 GeneID:4330189|
Length = 1299 bp|
Definition = Oryza sativa Japonica Group Os02g0654700, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:27309048..27310346|
CDS = 27309375..27310286|
GCID = <gbrowseImage1>
name=NC_008395:27309048..27310346
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:27309048..27310346
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgctgcttaatccggcgtcgagagaggtggccgcgctggacagcatccggcaccacctcctggaggaggaggaggagacgccggcgacggcgccggcgccgacgcggcggccggtgtactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccgttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcctccggctggctccccgacggctcattcgccgccgtcaagccggagtcgcaggactcctacgacgggtcctccatcggcagcttcctcgcgtcgtcgtcgtccgaggcggggacgcccggggaggtgacgtcgacggaggcgacggtgacgccggggatcagggagggcgagggcgaggccgtggcggtggcgtcgagggggaagcactaccgcggggtgaggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgcgcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccgcctaccgcatgcgcggctcccgcgcgctcctcaacttcccgctccgcatcggctccgagatcgccgccgcggccgccgccgccgccgcgggcaacaagcggccatatcccgacccggcgagctccggctcttcttccccttcatcctcttcctcctcgtcgtcgtcttcctcctccgggtcaccgaagcggaggaagagaggcgaggccgcggccgcgtccatggccatggcactggttccaccaccgccaccaccggcgcaggcaccggtgcagctcgccctcccggcccagccatggttcgccgccggtccgatccagcagctggtgagctaa</cdnaseq>|
AA = <aaseq>MLLNPASREVAALDSIRHHLLEEEEETPATAPAPTRRPVYCRSS SFGSLVADQWSESLPFRPNDAEDMVVYGALRDAFSSGWLPDGSFAAVKPESQDSYDGS SIGSFLASSSSEAGTPGEVTSTEATVTPGIREGEGEAVAVASRGKHYRGVRQRPWGKF AAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAA AAAAGNKRPYPDPASSGSSSPSSSSSSSSSSSSGSPKRRKRGEAAAASMAMALVPPPP PPAQAPVQLALPAQPWFAAGPIQQLVS</aaseq>|
DNA = <dnaseqindica>61..972#acaattccgctagtccgagtcaaaacaaaatcaaattcaaattcacgggataattcaaagatgctgcttaatccggcgtcgagagaggtggccgcgctggacagcatccggcaccacctcctggaggaggaggaggagacgccggcgacggcgccggcgccgacgcggcggccggtgtactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccgttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcctccggctggctccccgacggctcattcgccgccgtcaagccggagtcgcaggactcctacgacgggtcctccatcggcagcttcctcgcgtcgtcgtcgtccgaggcggggacgcccggggaggtgacgtcgacggaggcgacggtgacgccggggatcagggagggcgagggcgaggccgtggcggtggcgtcgagggggaagcactaccgcggggtgaggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgcgcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccgcctaccgcatgcgcggctcccgcgcgctcctcaacttcccgctccgcatcggctccgagatcgccgccgcggccgccgccgccgccgcgggcaacaagcggccatatcccgacccggcgagctccggctcttcttccccttcatcctcttcctcctcgtcgtcgtcttcctcctccgggtcaccgaagcggaggaagagaggcgaggccgcggccgcgtccatggccatggcactggttccaccaccgccaccaccggcgcaggcaccggtgcagctcgccctcccggcccagccatggttcgccgccggtccgatccagcagctggtgagctaagtggcgatgtggtagtggtagtggtgatttagccatcttgtgcgactgtgcgtgatcgattgctgcttgatgggtcgagcaagttcagaacagagcatcactctctgcagaatagaagaagttcatgaacagagcaatgcactgctccaagaaatgtgacgagttccaggcaatcacgccattgttcttggatgattgcgcagcaccagaaaaaagggaaaaaaaagattgtttgtgaaatgtggtgaggttttgtaagacttgcacaaaatttgagaaaaagaaaaagatcaatacatataaaatcttactagaaaaaagactttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054149.1 RefSeq:Os02g0654700]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+'''''AP59''''' is a member of stress-inducible AP2 genes in rice<ref name="ref1"/>.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+*Transcription factors with an APETELA2 (AP2) domain have been implicated in various cellular processes involved in plant development and stress responses. Of the 139 AP2 genes predicted in rice, ''Oh et al.'' identified 42 genes in study that are induced by one or more stress conditions, including drought, high salinity, low temperature, and abscisic acid. Phylogenic analysis of these '''42 stress-inducible AP2 genes''' revealed the presence of '''six subgroups''' ('''I–VI''') with distinct signature motifs. Two genes, ''AP37'' and ''AP59'', representing subgroups I and II, respectively<ref name="ref1"/>.
 ===Expression===
-Please input expression information here.
+*The expression of both ''AP37'' and ''AP59'' was found to be induced after 2 h of exposure to '''high-salinity''' and '''drought stress'''. ''AP37'' differs from ''AP59'' in its response to low temperature and ABA. The expression of the former responded rapidly to low temperature and was induced by ABA, whereas the latter responded '''slowly''' to '''low temperature''' and was '''not induced by ABA'''. This is somewhat inconsistent with the microarray results, which indicated that ''AP37'' is not induced by ABA. This discrepancy may be due to variation in the stress treatments, which showed that ''AP37'' and ''AP59'' are '''stress-inducible AP2 genes''' that are closely related yet different in their expression profiles<ref name="ref1"/>.
 ===Evolution===
-Please input evolution information here.
+''AP59'' is  member of '''stress-inducible AP2 genes''', it belongs to '''subgroup II'''<ref name="ref1"/>.
-You can also add sub-section(s) at will.
+*It is conceivable that the differential inactivation of one of the two AP2 DNA binding domains is responsible for the differential effects of the ap2-7 mutation on Af2 activity. It will be interesting to determine whether these effects involve a direct interaction of AP2 protein with AG regulatory sequences<ref name="ref2"/>. The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding<ref name="ref3"/>.
 ==Labs working on this gene==
-Please input related labs here.
+*School of Biotechnology and Environmental Engineering, Myongji University, Yongin 449–728, Korea
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

← Older revision		Revision as of 19:20, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os02g0654700\|		GeneName = Os02g0654700\|

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]