Os02g0673700 - Revision history

Caojiabao: /* Phenotypic analysis */

2017-05-26T02:45:22Z

‎Phenotypic analysis

Caojiabao: /* Phenotypic analysis */

2017-05-26T02:44:49Z

‎Phenotypic analysis

Caojiabao at 02:42, 26 May 2017

2017-05-26T02:42:31Z

Caojiabao at 02:41, 26 May 2017

2017-05-26T02:41:54Z

Caojiabao at 02:40, 26 May 2017

2017-05-26T02:40:27Z

Caojiabao at 02:23, 26 May 2017

2017-05-26T02:23:12Z

192.168.72.52 at 06:46, 14 May 2015

2015-05-14T06:46:00Z

124.16.129.48 at 19:20, 22 July 2012

2012-07-22T19:20:41Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os02g0673700| Description = Zinc finger, Dof-type family protein| Version = NM_001054251.1 GI:115447872 GeneID:4330293| Length = 2299 bp| Defin..."

2012-06-25T02:46:28Z

Created page with "{{JaponicaGene| GeneName = Os02g0673700| Description = Zinc finger, Dof-type family protein| Version = NM_001054251.1 GI:115447872 GeneID:4330293| Length = 2299 bp| Defin..."

New page

{{JaponicaGene|
GeneName = Os02g0673700|
Description = Zinc finger, Dof-type family protein|
Version = NM_001054251.1 GI:115447872 GeneID:4330293|
Length = 2299 bp|
Definition = Oryza sativa Japonica Group Os02g0673700, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
AP = Chromosome 2:28322917..28325215|
CDS = 28323082..28324203,28324886..28324891|
GCID = <gbrowseImage1>
name=NC_008395:28322917..28325215
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008395:28322917..28325215
source=RiceChromosome02
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgtgggggctagggctagtgaagcccatggaagagatgctgatgggtgcaaatccaaatcctaatgggagctcaaatcagccaccgccaccgccgtcctcggcggccagcgcccagcggcctatcgccccaccggcggctggagcggccgccggcgcgggcgccgccggagctggggctggcacggagcgccgcgcgcggccgcagaaggagaaggcgctcaactgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgcaacgtccccgtcggcggcggctcacggaagaacaagcgctcgtcgtcctcggtggtgccgtcggcggccgcgtcggcctccacctccgcggcggtgtccggctcggtccccgtggggctggcggccaagaacccgaagctgatgcacgagggagcgcaggacctcaacctagcgttcccgcaccaccacggccgcgccctgcagccgccggagttcacggcgttcccgagcttggagagcagcagcgtgtgcaaccccggaggcaacctggcggcggcgaacggcgccggtggcaggggcagcgtgggcgcgttctcggcgatggagttgctgaggagcaccggctgctacgttccgctgccgcagatggcgccgctagggatgccggcggagtacgcagctgcggggttccatctcggcgagttccgcatgccaccgccgccacagcagcagcagcagcaacaagctcagaccgtgctcggtttctccctggacacgcacggcgcgggtgcaggcggcggctccggggtgttcggcgcgtgcagcgctgggttgcaagagagcgcggcgggcaggttgctgttccccttcgaggacctgaagccggtggtgagcgccgcggctggcgacgcgaacagcggcggcgatcatcagtacgaccacggcaagaaccaaggtggtggcggcggcgtcatcggtggccatgaggccccagggttctggaatagcagcatgatcggcaacggcagcagcaatggcggcggcggcggcggttcttggtaa</cdnaseq>|
AA = <aaseq>MWGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAP PAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCK TCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNP KLMHEGAQDLNLAFPHHHGRALQPPEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVG AFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLG FSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQY DHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW</aaseq>|
DNA = <dnaseqindica>1013..2134#325..330#ctgatctgcgctcgatcctttctcgaatcggtgcatgcaacaccggcgacatgtctacaattaagatctctcaccgggggcccggccgggtcgattttggcttctgctcttcttctggatcttgttgatgtgggtgtttcttggtcgatccttcttgtttaatctgcctgtgccttgatcttggcgcttgcttttcctctggtgggatacggtgatctctattctctctcggctttgtttgctcttgggaaccgccatggccaaccttttattctttgtgcagatctatgcacggatcggccatattcttctcgctctgtgtgtatgtgggttagtttctgtcttctccattggcttcgagctgagggctcttgttgttgttgtttggggccttttaattctcttgctccctcctctccttccccttttaatccttgaaaggagcacacgacgcaccgcttttcttttcctttgttcctcgctttctttcttatcctccctttcctttttatcttttcatctctcttttcctcatggcttttctctccacccctcaccctttcgtctctctcctcaagcccacaccttgcatcaaaagagtagccatgtcttggaggatgatgtagtagcagcagcagcagtactgctacgccacaaacacaaccctacaagagcacaaacaaagttgtgtgttttgtgtggtggtgtgttttctctctcatctttactttgctttttttttcccgctttatttctatctttcacctttccctcttctagctttaatctcgctttgtatccatttgcttggttctttgttgcaccataaggatcctagctcacatcacacctcatgctcattcatcttcccccattcgtctctcatatactacatgttcttgcttcttggttcttgctaattgtctagtattgcataacttagttctaggtttgtgttgatacttgcaattgcaacatctaatggagtgcaacgacatgtgtcaatcaccaggggctagggctagtgaagcccatggaagagatgctgatgggtgcaaatccaaatcctaatgggagctcaaatcagccaccgccaccgccgtcctcggcggccagcgcccagcggcctatcgccccaccggcggctggagcggccgccggcgcgggcgccgccggagctggggctggcacggagcgccgcgcgcggccgcagaaggagaaggcgctcaactgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgcaacgtccccgtcggcggcggctcacggaagaacaagcgctcgtcgtcctcggtggtgccgtcggcggccgcgtcggcctccacctccgcggcggtgtccggctcggtccccgtggggctggcggccaagaacccgaagctgatgcacgagggagcgcaggacctcaacctagcgttcccgcaccaccacggccgcgccctgcagccgccggagttcacggcgttcccgagcttggagagcagcagcgtgtgcaaccccggaggcaacctggcggcggcgaacggcgccggtggcaggggcagcgtgggcgcgttctcggcgatggagttgctgaggagcaccggctgctacgttccgctgccgcagatggcgccgctagggatgccggcggagtacgcagctgcggggttccatctcggcgagttccgcatgccaccgccgccacagcagcagcagcagcaacaagctcagaccgtgctcggtttctccctggacacgcacggcgcgggtgcaggcggcggctccggggtgttcggcgcgtgcagcgctgggttgcaagagagcgcggcgggcaggttgctgttccccttcgaggacctgaagccggtggtgagcgccgcggctggcgacgcgaacagcggcggcgatcatcagtacgaccacggcaagaaccaaggtggtggcggcggcgtcatcggtggccatgaggccccagggttctggaatagcagcatgatcggcaacggcagcagcaatggcggcggcggcggcggttcttggtaaggtggtgcgagctgctactgcttgcccgccgccgccatgcatggctcatgcatgcacgcgtggtggtcagcagctagcagcatgtggagatagagaaacgagatagagacaaggggggttaataagcctgtggtgattagtgttacatatggcgttttgtttctc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054251.1 RefSeq:Os02g0673700]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 2]]
[[Category:Chromosome 2]]

@@ Line 9: / Line 9: @@
 ===Phenotypic analysis===
-*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO4<sup>2-</sup>,Cl-,PO43- and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
+*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO4<sup>2-</sup>,Cl-,PO4<sup>3-</sup> and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
 *The overexpression of '''''RDD1''''' increased nitrogen responsiveness and grain productiv-ity.

@@ Line 9: / Line 9: @@
 ===Phenotypic analysis===
-*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO42-,Cl-,PO43- and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
+*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO4<sup>2-</sup>,Cl-,PO43- and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
 *The overexpression of '''''RDD1''''' increased nitrogen responsiveness and grain productiv-ity.
 ===Expression===

@@ Line 9: / Line 9: @@
 ===Phenotypic analysis===
-*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO4^2-,Cl-,PO4^3- and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
+*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO42-,Cl-,PO43- and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
 *The overexpression of '''''RDD1''''' increased nitrogen responsiveness and grain productiv-ity.

@@ Line 9: / Line 9: @@
 ===Phenotypic analysis===
-*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO42,Cl,PO43and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
+*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO4^2-,Cl-,PO4^3- and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
 *The overexpression of '''''RDD1''''' increased nitrogen responsiveness and grain productiv-ity.

@@ Line 5: / Line 5: @@
 *'''''Os02g0673700''''' '''''<=>''''' '''''RDD1'''''
 ===Function===
-*Transcription factor encoding gene RDD1 plays a role in improving the uptake and accu-mulation of various nutrient ions in rice.
+*Transcription factor encoding gene '''''RDD1''''' plays a role in improving the uptake and accu-mulation of various nutrient ions in rice.
-*RDD1 can contribute to the increased grain productivity of rice via inducing theefﬁcient uptake and accumulation of various nutrient ions.
+*'''''RDD1''''' can contribute to the increased grain productivity of rice via inducing theefﬁcient uptake and accumulation of various nutrient ions.
 ===Phenotypic analysis===
-*The overexpression of RDD1induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO42,Cl,PO43and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
+*The overexpression of '''''RDD1''''' induced the expression of genes associated with the transport of several nutrients such as NH4+,Na+,SO42,Cl,PO43and sucrose, and the uptake and accumulation of various nutrient ions under low-nutrientconditions.
-*The overexpression of RDD1 increased nitrogen responsiveness and grain productiv-ity.
+*The overexpression of '''''RDD1''''' increased nitrogen responsiveness and grain productiv-ity.
 ===Expression===
-*An RDD1transgene driven by a strong constitutive promoter exhibited a diurnally oscillating expression similar tothat of the endogenous RDD1, and nucleotide substitution within the miR166 recognition site to preventmiR166–RDD1 mRNA pairing resulted in constitutive RDD1 expression.
+*An '''''RDD1''''' transgene driven by a strong constitutive promoter exhibited a diurnally oscillating expression similar tothat of the endogenous RDD1, and nucleotide substitution within the miR166 recognition site to preventmiR166–RDD1 mRNA pairing resulted in constitutive '''''RDD1''''' expression.

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os02g0673700''''' was reported as '''''RDD1''''' in 2016 <ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+*Transcription factor encoding gene RDD1 plays a role in improving the uptake and accu-mulation of various nutrient ions in rice.
 ===Expression===
-Please input expression information here.
+*An RDD1transgene driven by a strong constitutive promoter exhibited a diurnally oscillating expression similar tothat of the endogenous RDD1, and nucleotide substitution within the miR166 recognition site to preventmiR166–RDD1 mRNA pairing resulted in constitutive RDD1 expression.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+*Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba Ibaraki 305-8602, Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

← Older revision		Revision as of 06:46, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
−	~~GeneName = Os02g0673700\|~~
−	~~Description = Zinc finger, Dof-type family protein\|~~
−	~~Version = NM_001054251.1 GI:115447872 GeneID:4330293\|~~
−	~~Length = 2299 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os02g0673700, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 2\|Chromosome 2]]\|~~
−	~~AP = Chromosome 2:28322917..28325215\|~~
−	~~CDS = 28323082..28324203,28324886..28324891\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008395:28322917..28325215~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008395:28322917..28325215~~
−	~~source=RiceChromosome02~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgtgggggctagggctagtgaagcccatggaagagatgctgatgggtgcaaatccaaatcctaatgggagctcaaatcagccaccgccaccgccgtcctcggcggccagcgcccagcggcctatcgccccaccggcggctggagcggccgccggcgcgggcgccgccggagctggggctggcacggagcgccgcgcgcggccgcagaaggagaaggcgctcaactgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgcaacgtccccgtcggcggcggctcacggaagaacaagcgctcgtcgtcctcggtggtgccgtcggcggccgcgtcggcctccacctccgcggcggtgtccggctcggtccccgtggggctggcggccaagaacccgaagctgatgcacgagggagcgcaggacctcaacctagcgttcccgcaccaccacggccgcgccctgcagccgccggagttcacggcgttcccgagcttggagagcagcagcgtgtgcaaccccggaggcaacctggcggcggcgaacggcgccggtggcaggggcagcgtgggcgcgttctcggcgatggagttgctgaggagcaccggctgctacgttccgctgccgcagatggcgccgctagggatgccggcggagtacgcagctgcggggttccatctcggcgagttccgcatgccaccgccgccacagcagcagcagcagcaacaagctcagaccgtgctcggtttctccctggacacgcacggcgcgggtgcaggcggcggctccggggtgttcggcgcgtgcagcgctgggttgcaagagagcgcggcgggcaggttgctgttccccttcgaggacctgaagccggtggtgagcgccgcggctggcgacgcgaacagcggcggcgatcatcagtacgaccacggcaagaaccaaggtggtggcggcggcgtcatcggtggccatgaggccccagggttctggaatagcagcatgatcggcaacggcagcagcaatggcggcggcggcggcggttcttggtaa</cdnaseq>\|
−	AA = <aaseq>MWGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAP PAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCK TCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNP KLMHEGAQDLNLAFPHHHGRALQPPEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVG AFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLG FSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQY DHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW</aaseq>\|
−	DNA = <dnaseqindica>1013..2134#325..330#ctgatctgcgctcgatcctttctcgaatcggtgcatgcaacaccggcgacatgtctacaattaagatctctcaccgggggcccggccgggtcgattttggcttctgctcttcttctggatcttgttgatgtgggtgtttcttggtcgatccttcttgtttaatctgcctgtgccttgatcttggcgcttgcttttcctctggtgggatacggtgatctctattctctctcggctttgtttgctcttgggaaccgccatggccaaccttttattctttgtgcagatctatgcacggatcggccatattcttctcgctctgtgtgtatgtgggttagtttctgtcttctccattggcttcgagctgagggctcttgttgttgttgtttggggccttttaattctcttgctccctcctctccttccccttttaatccttgaaaggagcacacgacgcaccgcttttcttttcctttgttcctcgctttctttcttatcctccctttcctttttatcttttcatctctcttttcctcatggcttttctctccacccctcaccctttcgtctctctcctcaagcccacaccttgcatcaaaagagtagccatgtcttggaggatgatgtagtagcagcagcagcagtactgctacgccacaaacacaaccctacaagagcacaaacaaagttgtgtgttttgtgtggtggtgtgttttctctctcatctttactttgctttttttttcccgctttatttctatctttcacctttccctcttctagctttaatctcgctttgtatccatttgcttggttctttgttgcaccataaggatcctagctcacatcacacctcatgctcattcatcttcccccattcgtctctcatatactacatgttcttgcttcttggttcttgctaattgtctagtattgcataacttagttctaggtttgtgttgatacttgcaattgcaacatctaatggagtgcaacgacatgtgtcaatcaccaggggctagggctagtgaagcccatggaagagatgctgatgggtgcaaatccaaatcctaatgggagctcaaatcagccaccgccaccgccgtcctcggcggccagcgcccagcggcctatcgccccaccggcggctggagcggccgccggcgcgggcgccgccggagctggggctggcacggagcgccgcgcgcggccgcagaaggagaaggcgctcaactgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgcaacgtccccgtcggcggcggctcacggaagaacaagcgctcgtcgtcctcggtggtgccgtcggcggccgcgtcggcctccacctccgcggcggtgtccggctcggtccccgtggggctggcggccaagaacccgaagctgatgcacgagggagcgcaggacctcaacctagcgttcccgcaccaccacggccgcgccctgcagccgccggagttcacggcgttcccgagcttggagagcagcagcgtgtgcaaccccggaggcaacctggcggcggcgaacggcgccggtggcaggggcagcgtgggcgcgttctcggcgatggagttgctgaggagcaccggctgctacgttccgctgccgcagatggcgccgctagggatgccggcggagtacgcagctgcggggttccatctcggcgagttccgcatgccaccgccgccacagcagcagcagcagcaacaagctcagaccgtgctcggtttctccctggacacgcacggcgcgggtgcaggcggcggctccggggtgttcggcgcgtgcagcgctgggttgcaagagagcgcggcgggcaggttgctgttccccttcgaggacctgaagccggtggtgagcgccgcggctggcgacgcgaacagcggcggcgatcatcagtacgaccacggcaagaaccaaggtggtggcggcggcgtcatcggtggccatgaggccccagggttctggaatagcagcatgatcggcaacggcagcagcaatggcggcggcggcggcggttcttggtaaggtggtgcgagctgctactgcttgcccgccgccgccatgcatggctcatgcatgcacgcgtggtggtcagcagctagcagcatgtggagatagagaaacgagatagagacaaggggggttaataagcctgtggtgattagtgttacatatggcgttttgtttctc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054251.1 RefSeq:Os02g0673700]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 2]]~~
−	~~[[Category:~~Chromosome 2]]

← Older revision		Revision as of 19:20, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os02g0673700\|		GeneName = Os02g0673700\|