Os03g0107300 - Revision history

Guangyi: /* Annotated Information */

2016-11-19T06:19:01Z

‎Annotated Information

Guangyi: /* Expression */

2016-11-19T06:14:47Z

‎Expression

Guangyi: /* Expression */

2016-11-19T06:14:03Z

‎Expression

Guangyi at 06:11, 19 November 2016

2016-11-19T06:11:28Z

Guangyi at 06:10, 19 November 2016

2016-11-19T06:10:22Z

192.168.72.52 at 07:03, 14 May 2015

2015-05-14T07:03:07Z

124.16.129.48 at 19:26, 22 July 2012

2012-07-22T19:26:40Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0107300| Description = Citrate transporter family protein| Version = NM_001055226.1 GI:115450180 GeneID:4331328| Length = 2178 bp| Definit..."

2012-06-24T12:14:53Z

Created page with "{{JaponicaGene| GeneName = Os03g0107300| Description = Citrate transporter family protein| Version = NM_001055226.1 GI:115450180 GeneID:4331328| Length = 2178 bp| Definit..."

New page

{{JaponicaGene|
GeneName = Os03g0107300|
Description = Citrate transporter family protein|
Version = NM_001055226.1 GI:115450180 GeneID:4331328|
Length = 2178 bp|
Definition = Oryza sativa Japonica Group Os03g0107300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:409044..411221|
CDS = 409559..409827,409923..411072|
GCID = <gbrowseImage1>
name=NC_008396:409044..411221
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:409044..411221
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgagtgagcttgcgtcggcgcccaaggtggcgcttggatcgatcgcgttcgcggtgttctggatgatggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcggggtcgctgctgagcgcggtgctgatggtgatattccacgtgatcagccccgacgacgcgtacgcctccatcgacctcccaatcctgggcctcctcttcgccaccatggtggtgggcagctacctccggaacgccgggatgttcaagcacctggggcgtctgctggcgtggaagagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgccctcgccagcgccctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtcctcgagctcgccgccgagcgcaacctccccgccaagcccttcctcctcgccctcgcctccagcgccaacatcggctccgccgccacccccatcggcaacccccagaacctggtcatcgccttcaatagcaagatcaccttccccaagttcctcatgggaatcctcccggccatgctcgtcgggatggccgtcaacatggtcatgctgctctgcatgtactggagggagctgggcggaggggccgagctcagcgtcgacggcaagcagatggaggcggtggaggaaggcaggtcgccggcgtcggccaagagcacgccgcagctgaacggcaacggcaacacgatgatgtcgctggagatgtcggagaacataacgaccaagcacccatggttcatgcagtgcacggaggcgcggcggaagctgttcctcaagagcttcgcgtacgtggtgacggtggggatggtggtggcctacatggtggggctcaacatgtcgtggacggccatcaccacggcgctggcgctggtggtggtcgacttccgcgacgccgagccgtgcctggacaccgtgtcctactcgctgctcgtcttcttctccgggatgttcatcaccgtcagcggcttcaacaagacgggcctcccgggagccatctgggacttcatggccccctactccaaggtcaacagcgtcggcggcatctccgtcctctccgtcatcatcctcctcctctccaacctcgcatcaaacgtaccaacggtgcttcttatgggtgatgaggtggcgaaggcggcggcgctgatatcgccggcggcggtgacgacgtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatagtgtgcgagcaggcgaggagggcgcccaggaacgcctacgacctcaccttctggcagcacatcgtcttcggcgtcccatccaccctcatcgtcaccgccgtcggcatacccctcatcggcaagatctga</cdnaseq>|
AA = <aaseq>MSELASAPKVALGSIAFAVFWMMAVFPSVPFLPIGRTAGSLLSA VLMVIFHVISPDDAYASIDLPILGLLFATMVVGSYLRNAGMFKHLGRLLAWKSQGGRD LMCRVCVVTALASALFTNDTCCVVLTEFVLELAAERNLPAKPFLLALASSANIGSAAT PIGNPQNLVIAFNSKITFPKFLMGILPAMLVGMAVNMVMLLCMYWRELGGGAELSVDG KQMEAVEEGRSPASAKSTPQLNGNGNTMMSLEMSENITTKHPWFMQCTEARRKLFLKS FAYVVTVGMVVAYMVGLNMSWTAITTALALVVVDFRDAEPCLDTVSYSLLVFFSGMFI TVSGFNKTGLPGAIWDFMAPYSKVNSVGGISVLSVIILLLSNLASNVPTVLLMGDEVA KAAALISPAAVTTSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRAPRNAYDLTFWQH IVFGVPSTLIVTAVGIPLIGKI</aaseq>|
DNA = <dnaseqindica>1395..1663#150..1299#tcagcagcgcatgcactagcagcttagctactgcgcgcgtaccagagagagatcatcagctcaagtagctaagctagctataatctgctagctagctcgatcagacacttaattacctgctaggtggtggtcgatcgaagaagaagaagatgagtgagcttgcgtcggcgcccaaggtggcgcttggatcgatcgcgttcgcggtgttctggatgatggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcggggtcgctgctgagcgcggtgctgatggtgatattccacgtgatcagccccgacgacgcgtacgcctccatcgacctcccaatcctgggcctcctcttcgccaccatggtggtgggcagctacctccggaacgccgggatgttcaagcacctggggcgtctgctggcgtggaagagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgccctcgccagcgccctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtcctcgagctcgccgccgagcgcaacctccccgccaagcccttcctcctcgccctcgcctccagcgccaacatcggctccgccgccacccccatcggcaacccccagaacctggtcatcgccttcaatagcaagatcaccttccccaagttcctcatgggaatcctcccggccatgctcgtcgggatggccgtcaacatggtcatgctgctctgcatgtactggagggagctgggcggaggggccgagctcagcgtcgacggcaagcagatggaggcggtggaggaaggcaggtcgccggcgtcggccaagagcacgccgcagctgaacggcaacggcaacacgatgatgtcgctggagatgtcggagaacataacgaccaagcacccatggttcatgcagtgcacggaggcgcggcggaagctgttcctcaagagcttcgcgtacgtggtgacggtggggatggtggtggcctacatggtggggctcaacatgtcgtggacggccatcaccacggcgctggcgctggtggtggtcgacttccgcgacgccgagccgtgcctggacaccgtgtcctactcgctgctcgtcttcttctccgggatgttcatcaccgtcagcggcttcaacaagacgggcctcccgggagccatctgggacttcatggccccctactccaaggtcaacagcgtcggcggcatctccgtcctctccgtcatcatcctcctcctctccaacctcgcatcaaacgtaccaacgggtaattatacattctattaatccagaattaatgtatactactccatataagtataactaattaacatacaaaaatatatatgcgcatgcatgcagtgcttcttatgggtgatgaggtggcgaaggcggcggcgctgatatcgccggcggcggtgacgacgtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatagtgtgcgagcaggcgaggagggcgcccaggaacgcctacgacctcaccttctggcagcacatcgtcttcggcgtcccatccaccctcatcgtcaccgccgtcggcatacccctcatcggcaagatctgatctcatctcatcgacccatccaaattaattaattatgagatcgacaaacatccaagcttgctaggctcgtcgtcgtcgtcgtcgaccaccgtaccatatatatgcatgcatgccacgcacgtatatatatgctcctcaacctcaagtcaattaattaagagaatggatgaatgaatcaatgttgtgtatgatttcctttttgtttttgttttacccaccgtatatgtgctgtgtggtgtatggccggcgagcttgaaattgaattggccttgcttgcatgcatgcatggtgatcagatcagctcagctagctagctaaatcttgcttaattttatcaagtgtcaatcatgatgagaagagagggaactagatggagctagctagctagcaacacatgcagtgtgtgctaagcagtgcactctgcatgcttaaatttgcttgcttaattcaacatcgtattacatgtatgttgatatgtgcatgttcctcaaaatacatggaaaaaaaatgtttct</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055226.1 RefSeq:Os03g0107300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-Please input function information here.
+*This gene is constitutively expressed in the roots. The protein encoded by this gene is localized, like Lsi1, on the plasma membrane of cells in both the exodermis and the endodermis, but in contrast to Lsi1, which is localized on the distal side, '''Lsi2''' is localized on the proximal side of the same cells.
+<br>
 ===Expression===
 *Expression of '''Lsi2''' in Xenopus oocytes did not result in influx transport activity for silicon, but preloading of the oocytes with silicon resulted in a release of silicon, indicating that '''Lsi2''' is a silicon efflux transporter.
 <br>
 ==Labs working on this gene==

@@ Line 9: / Line 9: @@
 ===Expression===
-*Expression of '''Lsi2''' in Xenopus oocytes did not result in influx transport activity for silicon, but preloading of the oocytes with silicon resulted in a release of silicon, indicating that Lsi2 is a silicon efflux transporter.
+*Expression of '''Lsi2''' in Xenopus oocytes did not result in influx transport activity for silicon, but preloading of the oocytes with silicon resulted in a release of silicon, indicating that '''Lsi2''' is a silicon efflux transporter.
 <br>

@@ Line 9: / Line 9: @@
 ===Expression===
-Please input expression information here.
+*Expression of '''Lsi2''' in Xenopus oocytes did not result in influx transport activity for silicon, but preloading of the oocytes with silicon resulted in a release of silicon, indicating that Lsi2 is a silicon efflux transporter.
 ===Evolution===

@@ Line 1: / Line 1: @@
-The rice '''Os08g0189200''' was reported as '''	OsGLP8''' in 2009
+The rice '''Os03g0107300''' was reported as '''	lsi2''' in 2007 <ref name="ref1" /> by researchers from the Japan.
 <br>
 ==Annotated Information==
 ===Gene Symbol===
-*'''Os08g0189200 <=> 	OsGLP8'''
+*'''Os03g0107300 <=> 	lsi2'''
 <br>
 ===Function===

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os08g0189200''' was reported as '''	OsGLP8''' in 2009
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 14: / Line 19: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Research Institute for Bioresources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan.
-==References==
+</references>
-Please input cited references here.
+<br>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]

← Older revision		Revision as of 07:03, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
−	~~GeneName = Os03g0107300\|~~
−	~~Description = Citrate transporter family protein\|~~
−	~~Version = NM_001055226.1 GI:115450180 GeneID:4331328\|~~
−	~~Length = 2178 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os03g0107300, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 3\|Chromosome 3]]\|~~
−	~~AP = Chromosome 3:409044..411221\|~~
−	~~CDS = 409559..409827,409923..411072\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008396:409044..411221~~
−	~~source=RiceChromosome03~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008396:409044..411221~~
−	~~source=RiceChromosome03~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgagtgagcttgcgtcggcgcccaaggtggcgcttggatcgatcgcgttcgcggtgttctggatgatggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcggggtcgctgctgagcgcggtgctgatggtgatattccacgtgatcagccccgacgacgcgtacgcctccatcgacctcccaatcctgggcctcctcttcgccaccatggtggtgggcagctacctccggaacgccgggatgttcaagcacctggggcgtctgctggcgtggaagagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgccctcgccagcgccctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtcctcgagctcgccgccgagcgcaacctccccgccaagcccttcctcctcgccctcgcctccagcgccaacatcggctccgccgccacccccatcggcaacccccagaacctggtcatcgccttcaatagcaagatcaccttccccaagttcctcatgggaatcctcccggccatgctcgtcgggatggccgtcaacatggtcatgctgctctgcatgtactggagggagctgggcggaggggccgagctcagcgtcgacggcaagcagatggaggcggtggaggaaggcaggtcgccggcgtcggccaagagcacgccgcagctgaacggcaacggcaacacgatgatgtcgctggagatgtcggagaacataacgaccaagcacccatggttcatgcagtgcacggaggcgcggcggaagctgttcctcaagagcttcgcgtacgtggtgacggtggggatggtggtggcctacatggtggggctcaacatgtcgtggacggccatcaccacggcgctggcgctggtggtggtcgacttccgcgacgccgagccgtgcctggacaccgtgtcctactcgctgctcgtcttcttctccgggatgttcatcaccgtcagcggcttcaacaagacgggcctcccgggagccatctgggacttcatggccccctactccaaggtcaacagcgtcggcggcatctccgtcctctccgtcatcatcctcctcctctccaacctcgcatcaaacgtaccaacggtgcttcttatgggtgatgaggtggcgaaggcggcggcgctgatatcgccggcggcggtgacgacgtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatagtgtgcgagcaggcgaggagggcgcccaggaacgcctacgacctcaccttctggcagcacatcgtcttcggcgtcccatccaccctcatcgtcaccgccgtcggcatacccctcatcggcaagatctga</cdnaseq>\|
−	AA = <aaseq>MSELASAPKVALGSIAFAVFWMMAVFPSVPFLPIGRTAGSLLSA VLMVIFHVISPDDAYASIDLPILGLLFATMVVGSYLRNAGMFKHLGRLLAWKSQGGRD LMCRVCVVTALASALFTNDTCCVVLTEFVLELAAERNLPAKPFLLALASSANIGSAAT PIGNPQNLVIAFNSKITFPKFLMGILPAMLVGMAVNMVMLLCMYWRELGGGAELSVDG KQMEAVEEGRSPASAKSTPQLNGNGNTMMSLEMSENITTKHPWFMQCTEARRKLFLKS FAYVVTVGMVVAYMVGLNMSWTAITTALALVVVDFRDAEPCLDTVSYSLLVFFSGMFI TVSGFNKTGLPGAIWDFMAPYSKVNSVGGISVLSVIILLLSNLASNVPTVLLMGDEVA KAAALISPAAVTTSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRAPRNAYDLTFWQH IVFGVPSTLIVTAVGIPLIGKI</aaseq>\|
−	DNA = <dnaseqindica>1395..1663#150..1299#tcagcagcgcatgcactagcagcttagctactgcgcgcgtaccagagagagatcatcagctcaagtagctaagctagctataatctgctagctagctcgatcagacacttaattacctgctaggtggtggtcgatcgaagaagaagaagatgagtgagcttgcgtcggcgcccaaggtggcgcttggatcgatcgcgttcgcggtgttctggatgatggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcggggtcgctgctgagcgcggtgctgatggtgatattccacgtgatcagccccgacgacgcgtacgcctccatcgacctcccaatcctgggcctcctcttcgccaccatggtggtgggcagctacctccggaacgccgggatgttcaagcacctggggcgtctgctggcgtggaagagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgccctcgccagcgccctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtcctcgagctcgccgccgagcgcaacctccccgccaagcccttcctcctcgccctcgcctccagcgccaacatcggctccgccgccacccccatcggcaacccccagaacctggtcatcgccttcaatagcaagatcaccttccccaagttcctcatgggaatcctcccggccatgctcgtcgggatggccgtcaacatggtcatgctgctctgcatgtactggagggagctgggcggaggggccgagctcagcgtcgacggcaagcagatggaggcggtggaggaaggcaggtcgccggcgtcggccaagagcacgccgcagctgaacggcaacggcaacacgatgatgtcgctggagatgtcggagaacataacgaccaagcacccatggttcatgcagtgcacggaggcgcggcggaagctgttcctcaagagcttcgcgtacgtggtgacggtggggatggtggtggcctacatggtggggctcaacatgtcgtggacggccatcaccacggcgctggcgctggtggtggtcgacttccgcgacgccgagccgtgcctggacaccgtgtcctactcgctgctcgtcttcttctccgggatgttcatcaccgtcagcggcttcaacaagacgggcctcccgggagccatctgggacttcatggccccctactccaaggtcaacagcgtcggcggcatctccgtcctctccgtcatcatcctcctcctctccaacctcgcatcaaacgtaccaacgggtaattatacattctattaatccagaattaatgtatactactccatataagtataactaattaacatacaaaaatatatatgcgcatgcatgcagtgcttcttatgggtgatgaggtggcgaaggcggcggcgctgatatcgccggcggcggtgacgacgtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatagtgtgcgagcaggcgaggagggcgcccaggaacgcctacgacctcaccttctggcagcacatcgtcttcggcgtcccatccaccctcatcgtcaccgccgtcggcatacccctcatcggcaagatctgatctcatctcatcgacccatccaaattaattaattatgagatcgacaaacatccaagcttgctaggctcgtcgtcgtcgtcgtcgaccaccgtaccatatatatgcatgcatgccacgcacgtatatatatgctcctcaacctcaagtcaattaattaagagaatggatgaatgaatcaatgttgtgtatgatttcctttttgtttttgttttacccaccgtatatgtgctgtgtggtgtatggccggcgagcttgaaattgaattggccttgcttgcatgcatgcatggtgatcagatcagctcagctagctagctaaatcttgcttaattttatcaagtgtcaatcatgatgagaagagagggaactagatggagctagctagctagcaacacatgcagtgtgtgctaagcagtgcactctgcatgcttaaatttgcttgcttaattcaacatcgtattacatgtatgttgatatgtgcatgttcctcaaaatacatggaaaaaaaatgtttct</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055226.1 RefSeq:Os03g0107300]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 3]]~~
−	~~[[Category:~~Chromosome 3]]

← Older revision		Revision as of 19:26, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0107300\|		GeneName = Os03g0107300\|