Os03g0119966 - Revision history

Guangyi at 06:06, 19 November 2016

2016-11-19T06:06:02Z

Guangyi at 06:02, 19 November 2016

2016-11-19T06:02:27Z

192.168.72.52 at 09:12, 16 June 2015

2015-06-16T09:12:23Z

Rice2012: /* Structured Information */

2015-06-12T05:00:04Z

‎Structured Information

Sunshinelulu at 08:35, 9 June 2014

2014-06-09T08:35:09Z

124.16.129.48 at 19:27, 22 July 2012

2012-07-22T19:27:14Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0119966| Description = Similar to OsNAC8 protein| Version = NM_001186312.1 GI:297721754 GeneID:9270943| Length = 3958 bp| Definition = Ory..."

2012-06-24T12:16:30Z

Created page with "{{JaponicaGene| GeneName = Os03g0119966| Description = Similar to OsNAC8 protein| Version = NM_001186312.1 GI:297721754 GeneID:9270943| Length = 3958 bp| Definition = Ory..."

New page

{{JaponicaGene|
GeneName = Os03g0119966|
Description = Similar to OsNAC8 protein|
Version = NM_001186312.1 GI:297721754 GeneID:9270943|
Length = 3958 bp|
Definition = Oryza sativa Japonica Group Os03g0119966, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:1067800..1071757|
CDS = 1067800..1067956,1069447..1069724,1069910..1070266,1070370..1070783,1070885..1070966<br>,1071093..1071757|
GCID = <gbrowseImage1>
name=NC_008396:1067800..1071757
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:1067800..1071757
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgcccgtgagtttgcctccaggtttcaggttccaccccaccgatgaagaactaatcatctactaccttaagcggaagatcaacggaagacagatagaactcgaaatcattccagaggttgatctttacaagtgtgagccttgggatctgcctgaaaaatcctttcttccgagtaaagatctcgaatggtacttcttcagccctagagaccgcaagtacccaaatggatcaaggacgaaccgtgcaacaaaagccggatactggaaggcaactgggaaagatcgaaaagtgaactcacagaggcgtgcagttggtatgaagaagactcttgtgtactaccgtggtcgagctccacatggttctcgcaccgattgggtcatgcacgagtaccgcctcgatgagagggaatgcgagactgacactggcttacaggatgcatatgctttatgccgggtgttcaagaagacagcgcccgggccaaagatcatagagcattatggtgtggtgcaccaccatgtcgagcaacctcaatggatgacgagcagtatcgatcgctccccaacgttggacgtgtcgtgtgatggaagaggtgatgactttgagagcagcagcttctctttcccaacagagacgccaatggactccatgcacggtgggtttggaatgcagatgagtgcacctcacgaggatggcaaatggatgcagtttctgagtgaagatgccttcaacgccaccaatccattcttgacgaacccagtttctgccaacttctcatgccttccatccaaggtggatgttgcactggaatgtgcgaggctgcagcacaggctcaccttgcctcccttggaggtggaggatttcccacaggacgtcagccttgacacgaagattggcatacttcgcagtaaccccaacgaagttgacattctccaagaattcctgtcagttgcgactgcctctcaggagctaattaatggctccaccagtagctaccctgaaatgtggttaggagctagcacaagcagtgctagctacgtcaatgaactgtcctctctagttgagatgggcggcgttggcacttctaaccaccacgaatccgcaaggctacaggtcgagatcgctgacatggaggtgttcaaggacgagaagaagcgggtggagaaccttagaggagtcaagttggtgaacaatgaccttggggagattgttgtagaaggagatgaaagcaatccaacagaagacatcatcgcgcagtaccctataaaagtcactgcagataattcaggagaagccggtcatcgcatgaccgatcccactgacgtaggcggcatcgacactgccccgatcttctcgcaatctcaacctgacgactttgctgctggtttcgacgacgtcaaccctaatgcatctttcgatctgtacgagaaggttgacgtcaaccacaggctattcgtttcaagggtcgctgcggcgaagacattcttccaccgcattgagccatcgaagaaggtcagcttccactcgaacccggcagcaaccgccgtcagtaaggcgaccgagaagttccatttccccgttacgaccaaagttagtggtagggtttccatttttagcaagttcaaggcactcataagggacaagttcttgatgatgaggccatcacattcataccaaaggttgggcagcaaagaaaccacagtgaatgagctgctgcagattgtgtcactccttttagcaccgaagcaaatcaatggctgccctactgagcaagagctggtcaagaagaaggcgaaagaagtgatgaagccgggatggggtcgtgaagggagcaacaaattgtggcttccgctctccaaagggaagggcatttccagcatgtttttgagtgggaaatggacgtttctaacctccgcgttggccatcagcactccagctgagtgcgatcactaa</cdnaseq>|
AA = <aaseq>MAPVSLPPGFRFHPTDEELIIYYLKRKINGRQIELEIIPEVDLY KCEPWDLPEKSFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNSQR RAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDERECETDTGLQDAYALCRVFKKTAPG PKIIEHYGVVHHHVEQPQWMTSSIDRSPTLDVSCDGRGDDFESSSFSFPTETPMDSMH GGFGMQMSAPHEDGKWMQFLSEDAFNATNPFLTNPVSANFSCLPSKVDVALECARLQH RLTLPPLEVEDFPQDVSLDTKIGILRSNPNEVDILQEFLSVATASQELINGSTSSYPE MWLGASTSSASYVNELSSLVEMGGVGTSNHHESARLQVEIADMEVFKDEKKRVENLRG VKLVNNDLGEIVVEGDESNPTEDIIAQYPIKVTADNSGEAGHRMTDPTDVGGIDTAPI FSQSQPDDFAAGFDDVNPNASFDLYEKVDVNHRLFVSRVAAAKTFFHRIEPSKKVSFH SNPAATAVSKATEKFHFPVTTKVSGRVSIFSKFKALIRDKFLMMRPSHSYQRLGSKET TVNELLQIVSLLLAPKQINGCPTEQELVKKKAKEVMKPGWGREGSNKLWLPLSKGKGI SSMFLSGKWTFLTSALAISTPAECDH</aaseq>|
DNA = <dnaseqindica>1..157#1648..1925#2111..2467#2571..2984#3086..3167#3294..3958#atggcgcccgtgagtttgcctccaggtttcaggttccaccccaccgatgaagaactaatcatctactaccttaagcggaagatcaacggaagacagatagaactcgaaatcattccagaggttgatctttacaagtgtgagccttgggatctgcctggtatgttcttagtttgcttgttctaaagatatctattcctagtttttatgttgcttgttggtggtagaagttagaatgctgtagcccatgctaggatatatatatttcaatccaaccctaggcccatgcagctatcaccaattggcgttcttatatatcattctcttgctatataggagtaacagtttctttctttttgttttaagggtaggaatagcagtttcatgatatataatttgtatgagacttttgtataaatgctataaggacaagttttaagtttatatgcatgttaaaattcaggttaacaattaactataggcaagcatgcacctttattgttctccaaggaaagcacatatataggtccagtatgtttattggatgccgtgttatgtagacactaagcaatcttattcaattcttatactattatgccctcccaagaaacaccagtgcctacactacttgaggaaagaataaccacatgttcccttcttgatgagcacttcatctagctatttgtagttgaaatgtatgtaataataatcactaattaatcctggctataaatgtgtagctctatctgttgttttagtttttcttttatttcacataagtagcttttatgtcatttatgtcacaaaagaaaaggtttccatgattaattcgtaaattttggtacatttgaattgctagttatatcaaagcatatttgattttttttctctttatatataaaaaatcaagcattgtcaaaagcgatgtttcactgtcatagctttgtgtgaaaacaagattaatcatactgtgaaatttgctttactttcaaacatcttatgcacaccgaaaggagggatattgatagatcttgatccttttgtcaaaagaaatttaccttcaaaaagaaacgtcaaatttctgccaagtgtaaaggtgacattatatacgtccatgcactgagatacttgaaatggaaaataaatcctttatatcagtaacatcaaagttaaagtttatatattttggaccatgtcacaatcacagagagatttgaggaaaagatatattctctctttatccacttgctgtttgctttcaagcttgacagtttactacaaaaacaccatgtagcattcaacattctacgaagcgagtgctgtaaaaatatcgaataaaaagagaaaataaagatgagccttttttcttggggtgacaaaataaagcaagaaactaagaaaggaacttgtgatgaacatataggtcaagaagatgaacaaaagtccgcacagcctccaagagatataaagtgaccttggtctaattttctttcagctatggtgggctatcatgttaaatagccatatcttaactctgtcattagatccaatcatgatagtagacaagtacttcaatgtttatgctgcatgcatgattatgtatgactttttgtttgtatgacaccccctaactgatcgttcaatattcagaaaaatcctttcttccgagtaaagatctcgaatggtacttcttcagccctagagaccgcaagtacccaaatggatcaaggacgaaccgtgcaacaaaagccggatactggaaggcaactgggaaagatcgaaaagtgaactcacagaggcgtgcagttggtatgaagaagactcttgtgtactaccgtggtcgagctccacatggttctcgcaccgattgggtcatgcacgagtaccgcctcgatgagagggaatgcgagactgacactggcttacaggtgtgttactattaatcttgttgcatttttaaatctacaaccataatatatggataaaccatatatgttatatttagcccttcttttctgaaattataaacctagagtaaaatatgttactagctgcttgacatggacgcggcctctgatatgcaacctctttgcatttgtgtgtctatatgtaggatgcatatgctttatgccgggtgttcaagaagacagcgcccgggccaaagatcatagagcattatggtgtggtgcaccaccatgtcgagcaacctcaatggatgacgagcagtatcgatcgctccccaacgttggacgtgtcgtgtgatggaagaggtgatgactttgagagcagcagcttctctttcccaacagagacgccaatggactccatgcacggtgggtttggaatgcagatgagtgcacctcacgaggatggcaaatggatgcagtttctgagtgaagatgccttcaacgccaccaatccattcttgacgaacccagtttctgccaacttctcatgccttccatccaaggtacatatacatatatagtcaaaaatgaaggttacttactggtacagatgacatgtatattcaggcaatgagttcttaccggtgcaatgatattcatatgcaggtggatgttgcactggaatgtgcgaggctgcagcacaggctcaccttgcctcccttggaggtggaggatttcccacaggacgtcagccttgacacgaagattggcatacttcgcagtaaccccaacgaagttgacattctccaagaattcctgtcagttgcgactgcctctcaggagctaattaatggctccaccagtagctaccctgaaatgtggttaggagctagcacaagcagtgctagctacgtcaatgaactgtcctctctagttgagatgggcggcgttggcacttctaaccaccacgaatccgcaaggctacaggtcgagatcgctgacatggaggtgttcaaggacgagaagaagcgggtggagaaccttagaggagtcaagttggtgaacaatgaccttggggaggtaattgtttgcatcatacctatacaagtatattcccatcattatatatatactacatctcatgagactgattactttcatgcttcatttgtctcaagcagattgttgtagaaggagatgaaagcaatccaacagaagacatcatcgcgcagtaccctataaaagtcactgcagataattcaggtatgtaatatttaattttggctgttttacatgggctccacagaagtaattagcagtattccatattcgatacagactgtatacagatacagttcttgcatgcactaactcagagctagattgcaggagaagccggtcatcgcatgaccgatcccactgacgtaggcggcatcgacactgccccgatcttctcgcaatctcaacctgacgactttgctgctggtttcgacgacgtcaaccctaatgcatctttcgatctgtacgagaaggttgacgtcaaccacaggctattcgtttcaagggtcgctgcggcgaagacattcttccaccgcattgagccatcgaagaaggtcagcttccactcgaacccggcagcaaccgccgtcagtaaggcgaccgagaagttccatttccccgttacgaccaaagttagtggtagggtttccatttttagcaagttcaaggcactcataagggacaagttcttgatgatgaggccatcacattcataccaaaggttgggcagcaaagaaaccacagtgaatgagctgctgcagattgtgtcactccttttagcaccgaagcaaatcaatggctgccctactgagcaagagctggtcaagaagaaggcgaaagaagtgatgaagccgggatggggtcgtgaagggagcaacaaattgtggcttccgctctccaaagggaagggcatttccagcatgtttttgagtgggaaatggacgtttctaacctccgcgttggccatcagcactccagctgagtgcgatcactaa</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001186312.1 RefSeq:Os03g0119966]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-Please input function information here.
+*'''RIM1''' functions as a host factor that is required for multiplication of RDV in rice.
+<br>
-===Expression===
+===Mutant===
-Please input expression information here.
+*The '''rim1-1''' mutant remained susceptible to the two other viruses tested, one ofm which is also transmitted by leafhoppers, suggesting that the multiplication rather than transmission of RDV is specifically impaired in this mutant.
+<br>
 ==Labs working on this gene==
 *National Agricultural Research Center, Tsukuba, Ibaraki 305-8666, Japan,

@@ Line 1: / Line 1: @@
+The rice '''Os03g0119966''' was reported as '''		rim1''' in 2008 <ref name="ref1" /> by researchers from the Japan.
-Please input one-sentence summary here.
+<br>
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 15: / Line 17: @@
 ==Labs working on this gene==
-Please input related labs here.
+*National Agricultural Research Center, Tsukuba, Ibaraki 305-8666, Japan,
+*National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
 		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 03]]

@@ Line 1: / Line 1: @@
 Please input one-sentence summary here.
-RIM1 is related to resistance to rice dwarf virus (RDV). Its encoding product RIM factor act as host factor, which is indispensable for RDV increase in rice.
 ==Annotated Information==
-===Phenotype characters===
+===Function===
-We can get a mutant of rice rim1-1 which resistant to rice dwarf virus  by insertion of Tos17. Compared with wild type, the mutant exhibit no dwarf, relatively slow growth, root short, apex sometimes curled up. Mutant rim1-1 only resistant to rice dwarf virus, while not to yellow leaves of rice and rice stripe virus. Over-expression of RIM1 transgenic leads to more sensitiveness to rice dwarf virus(Yoshii et al, 2009).
+Please input function information here.
-===Gene cloning and function analysis===
 ===Expression===
 Please input expression information here.
@@ Line 25: / Line 19: @@
 ==References==
 Please input cited references here.
-. Motoyasu Yoshii;Muneo Yamazaki;Randeep Rakwal;Mitsuko Kishi-Kaboshi;Akio Miyao;Hirohiko Hirochika. The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling. The Plant Journal, 2010, 61(5): 804-815
 ==Structured Information==
+		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 03]]

@@ Line 28: / Line 28: @@
 . Motoyasu Yoshii;Takumi Shimizu;Muneo Yamazaki;Takahiko Higashi;Akio Miyao;Hirohiko Hirochika;Toshihiro Omura. Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus. The Plant Journal, 2009, 57(4): 615-625
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

@@ Line 1: / Line 1: @@
 Please input one-sentence summary here.
+RIM1 is related to resistance to rice dwarf virus (RDV). Its encoding product RIM factor act as host factor, which is indispensable for RDV increase in rice.
 ==Annotated Information==
-===Function===
+===Phenotype characters===
-Please input function information here.
+We can get a mutant of rice rim1-1 which resistant to rice dwarf virus  by insertion of Tos17. Compared with wild type, the mutant exhibit no dwarf, relatively slow growth, root short, apex sometimes curled up. Mutant rim1-1 only resistant to rice dwarf virus, while not to yellow leaves of rice and rice stripe virus. Over-expression of RIM1 transgenic leads to more sensitiveness to rice dwarf virus(Yoshii et al, 2009).
+===Gene cloning and function analysis===
 ===Expression===
 Please input expression information here.
@@ Line 18: / Line 25: @@
 ==References==
 Please input cited references here.
+. Motoyasu Yoshii;Muneo Yamazaki;Randeep Rakwal;Mitsuko Kishi-Kaboshi;Akio Miyao;Hirohiko Hirochika. The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling. The Plant Journal, 2010, 61(5): 804-815
 ==Structured Information==
 {{JaponicaGene|

← Older revision		Revision as of 19:27, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0119966\|		GeneName = Os03g0119966\|