Os03g0181100 - Revision history

Liming Pan: /* Annotated Information */

2016-10-19T15:32:25Z

‎Annotated Information

Liming Pan at 15:32, 19 October 2016

2016-10-19T15:32:13Z

192.168.72.52 at 07:07, 14 May 2015

2015-05-14T07:07:56Z

124.16.129.48 at 19:29, 22 July 2012

2012-07-22T19:29:35Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0181100| Description = ZIM domain containing protein| Version = NM_001055703.1 GI:115451134 GeneID:4331834| Length = 937 bp| Definition = ..."

2012-06-24T12:23:06Z

Created page with "{{JaponicaGene| GeneName = Os03g0181100| Description = ZIM domain containing protein| Version = NM_001055703.1 GI:115451134 GeneID:4331834| Length = 937 bp| Definition = ..."

New page

{{JaponicaGene|
GeneName = Os03g0181100|
Description = ZIM domain containing protein|
Version = NM_001055703.1 GI:115451134 GeneID:4331834|
Length = 937 bp|
Definition = Oryza sativa Japonica Group Os03g0181100, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:4227220..4228156|
CDS = 4227418..4227981|
GCID = <gbrowseImage1>
name=NC_008396:4227220..4228156
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:4227220..4228156
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgatggaggggaagagcaggaggttcgcggtggcgtgcggggtgctcagccagtacgtgagggcggagcagaagatggcggcggcggcgggggcggcaccggcgagggcggtgacgacgctgagcctgatgcctggggcggaggtggtcgtcgaggaggaggagcggagggaggttggggaggaggaggcggggccagcgacggcgccggccgcgccgctgaccatcttctacggtgggaggatggtcgtcttcgaggacttccccgcggacaaggcggcggaggtgatgcgcatggcctcctccgggatggcggcggcgccggctcagcgggagggcgccgcgctcgcggacatgcccatcatgaggaaggcgtcgctgcagcggttcttcgccaagcgcaaggaccgcctcgcggcgaccaccccctacgcccgcccgtcgccggcggagaccaaggcctccgagccggaggagaagaagacgcccacctcatggctggacctcgccgcctccgcctccgccgccgcgcgccgtgacagcctcaccatcgcgctgtga</cdnaseq>|
AA = <aaseq>MAMEGKSRRFAVACGVLSQYVRAEQKMAAAAGAAPARAVTTLSL MPGAEVVVEEEERREVGEEEAGPATAPAAPLTIFYGGRMVVFEDFPADKAAEVMRMAS SGMAAAPAQREGAALADMPIMRKASLQRFFAKRKDRLAATTPYARPSPAETKASEPEE KKTPTSWLDLAASASAAARRDSLTIAL</aaseq>|
DNA = <dnaseqindica>199..762#gcttcctcctccttccccaacttgcctccaattccaagttccaaccctccacctccctatataacacagctcttcccaccccgtcaaatcccacgactcaaaaccaccaaaactcaccaagcaaagcaccagcgaggaagaacaagaaggaaggtgaagagaagccgcgttttgtttctcgcgaaagtgtttgttgatatggcgatggaggggaagagcaggaggttcgcggtggcgtgcggggtgctcagccagtacgtgagggcggagcagaagatggcggcggcggcgggggcggcaccggcgagggcggtgacgacgctgagcctgatgcctggggcggaggtggtcgtcgaggaggaggagcggagggaggttggggaggaggaggcggggccagcgacggcgccggccgcgccgctgaccatcttctacggtgggaggatggtcgtcttcgaggacttccccgcggacaaggcggcggaggtgatgcgcatggcctcctccgggatggcggcggcgccggctcagcgggagggcgccgcgctcgcggacatgcccatcatgaggaaggcgtcgctgcagcggttcttcgccaagcgcaaggaccgcctcgcggcgaccaccccctacgcccgcccgtcgccggcggagaccaaggcctccgagccggaggagaagaagacgcccacctcatggctggacctcgccgcctccgcctccgccgccgcgcgccgtgacagcctcaccatcgcgctgtgatctgcgcggctttgaccaaaaacgacttaagacgcgcgcgcgctctcagcgcgcaagaggattgattcactttgctcatacccatggcgacgtagagtttttaccgcttttgctatacttctttgtaaaattcgatagggagattgaattgatgggaaaccccttgtgcctgttc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055703.1 RefSeq:Os03g0181100]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:131-Os03g0181100.png|right|thumb|427px|'''Figure 2.''' ''Grain Sizes for Transgenic Plants Overexpressing TIFY11b in Ripening Seeds (prolamin promoter) and in the Whole Plant Body (ubiquitin promoter) and Control Plants (vector control)..<ref name="ref1" />.'']]
+[[File:131-Os03g0181100.png|right|thumb|327px|'''Figure 2.''' ''Grain Sizes for Transgenic Plants Overexpressing TIFY11b in Ripening Seeds (prolamin promoter) and in the Whole Plant Body (ubiquitin promoter) and Control Plants (vector control)..<ref name="ref1" />.'']]
 ===Function===
 * Overexpression of Rice '''''TIFY11b''''' Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os03g0181100''''' was reported as '''''TIFY11b''''' in 2012 <ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* Overexpression of Rice '''''TIFY11b''''' Gene Increases Grain Size through Enhanced Accumulation of Carbohydrates in the Stem
+* '''''TIFY11b''''' is a novel grain-size increasing gene.
 ===Expression===
-Please input expression information here.
+* Mature leaves (the 4th leaf from the top frag leaf) of TIFY11b-overexpressing lines were 1.09 to 1.18-fold longer than corresponding leaves of WT plants (Fig. 3A).
+* Microscopic observation of the leaf surface revealed that it was filled with cells of similar sizes among the transgenic lines and WT plants (Fig. 3B, C), suggesting that the elongation caused by the overexpression of TIFY11b was due to an increase in the number, not the size, of the cells.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* Hokuriku Research Center, National Agricultural Research Center, 1-2-1 Inada, Joetsu, Niigata 943-0193, Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]

← Older revision		Revision as of 07:07, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
−	~~GeneName = Os03g0181100\|~~
−	~~Description = ZIM domain containing protein\|~~
−	~~Version = NM_001055703.1 GI:115451134 GeneID:4331834\|~~
−	~~Length = 937 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os03g0181100, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 3\|Chromosome 3]]\|~~
−	~~AP = Chromosome 3:4227220..4228156\|~~
−	~~CDS = 4227418..4227981\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008396:4227220..4228156~~
−	~~source=RiceChromosome03~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008396:4227220..4228156~~
−	~~source=RiceChromosome03~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcgatggaggggaagagcaggaggttcgcggtggcgtgcggggtgctcagccagtacgtgagggcggagcagaagatggcggcggcggcgggggcggcaccggcgagggcggtgacgacgctgagcctgatgcctggggcggaggtggtcgtcgaggaggaggagcggagggaggttggggaggaggaggcggggccagcgacggcgccggccgcgccgctgaccatcttctacggtgggaggatggtcgtcttcgaggacttccccgcggacaaggcggcggaggtgatgcgcatggcctcctccgggatggcggcggcgccggctcagcgggagggcgccgcgctcgcggacatgcccatcatgaggaaggcgtcgctgcagcggttcttcgccaagcgcaaggaccgcctcgcggcgaccaccccctacgcccgcccgtcgccggcggagaccaaggcctccgagccggaggagaagaagacgcccacctcatggctggacctcgccgcctccgcctccgccgccgcgcgccgtgacagcctcaccatcgcgctgtga</cdnaseq>\|
−	AA = <aaseq>MAMEGKSRRFAVACGVLSQYVRAEQKMAAAAGAAPARAVTTLSL MPGAEVVVEEEERREVGEEEAGPATAPAAPLTIFYGGRMVVFEDFPADKAAEVMRMAS SGMAAAPAQREGAALADMPIMRKASLQRFFAKRKDRLAATTPYARPSPAETKASEPEE KKTPTSWLDLAASASAAARRDSLTIAL</aaseq>\|
−	DNA = <dnaseqindica>199..762#gcttcctcctccttccccaacttgcctccaattccaagttccaaccctccacctccctatataacacagctcttcccaccccgtcaaatcccacgactcaaaaccaccaaaactcaccaagcaaagcaccagcgaggaagaacaagaaggaaggtgaagagaagccgcgttttgtttctcgcgaaagtgtttgttgatatggcgatggaggggaagagcaggaggttcgcggtggcgtgcggggtgctcagccagtacgtgagggcggagcagaagatggcggcggcggcgggggcggcaccggcgagggcggtgacgacgctgagcctgatgcctggggcggaggtggtcgtcgaggaggaggagcggagggaggttggggaggaggaggcggggccagcgacggcgccggccgcgccgctgaccatcttctacggtgggaggatggtcgtcttcgaggacttccccgcggacaaggcggcggaggtgatgcgcatggcctcctccgggatggcggcggcgccggctcagcgggagggcgccgcgctcgcggacatgcccatcatgaggaaggcgtcgctgcagcggttcttcgccaagcgcaaggaccgcctcgcggcgaccaccccctacgcccgcccgtcgccggcggagaccaaggcctccgagccggaggagaagaagacgcccacctcatggctggacctcgccgcctccgcctccgccgccgcgcgccgtgacagcctcaccatcgcgctgtgatctgcgcggctttgaccaaaaacgacttaagacgcgcgcgcgctctcagcgcgcaagaggattgattcactttgctcatacccatggcgacgtagagtttttaccgcttttgctatacttctttgtaaaattcgatagggagattgaattgatgggaaaccccttgtgcctgttc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055703.1 RefSeq:Os03g0181100]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 3]]~~
−	~~[[Category:~~Chromosome 3]]

← Older revision		Revision as of 19:29, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0181100\|		GeneName = Os03g0181100\|