Os03g0223400 - Revision history

Rice2012: /* Structured Information */

2015-06-12T05:35:21Z

‎Structured Information

Zhangye at 09:25, 2 March 2015

2015-03-02T09:25:58Z

Wyjun1990: /* Function */

2014-06-08T06:47:10Z

‎Function

Wyjun1990: /* Function */

2014-06-08T06:46:51Z

‎Function

Wyjun1990: /* Annotated Information */

2014-06-08T06:30:44Z

‎Annotated Information

124.16.129.48 at 19:31, 22 July 2012

2012-07-22T19:31:12Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0223400| Description = Glutamine synthetase root isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS8)| Version = NM_001055959..."

2012-06-24T12:27:16Z

Created page with "{{JaponicaGene| GeneName = Os03g0223400| Description = Glutamine synthetase root isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS8)| Version = NM_001055959..."

New page

{{JaponicaGene|
GeneName = Os03g0223400|
Description = Glutamine synthetase root isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS8)|
Version = NM_001055959.2 GI:297600565 GeneID:4332108|
Length = 4789 bp|
Definition = Oryza sativa Japonica Group Os03g0223400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:6485275..6490063|
CDS = 6485550..6485705,6485797..6485956,6486046..6486137,6486332..6486406,6486543..6486670<br>,6487129..6487217,6487603..6487709,6488637..6488685,6488797..6488900<br>,6489008..6489047,6489334..6489407|
GCID = <gbrowseImage1>
name=NC_008396:6485275..6490063
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:6485275..6490063
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggccaacctcaccgacctcgttaacctcaacctcagcgactgcagcgacaagatcatcgccgagtacatctgggttggaggatcgggcatagacctcaggagcaaagcgaggactgtgaaaggccccatcaccgatgtgagccagctgccgaagtggaactacgacggctccagcaccgggcaggctcccggcgaggacagcgaagtgatcctctaccctcaagccattttcaaggacccgttcaggaggggcgacaacatccttgtgatgtgcgactgctacacgccacaaggtgagccaatccccactaacaagaggcacagtgccgccaagatcttcagccaccctgatgttgttgctgaggtgccatggtacggtattgagcaggagtacacactccttcaaaaggatgtgaactggccccttggctggccagttggtggcttccctggcccacagggaccatactactgcgctgccggtgccgaaaaggcgttcggccgcgacatcgtggacgcccactacaaggcctgcatctacgccgggatcaacatcagtggcatcaacggggaagtcatgcccggccagtgggagttccaagttggcccgtcagttggcatcgccgctgctgaccaagtgtgggttgcccgctacatcctcgagagggtcacagaggtggccggagtcgtgctctcccttgacccgaagccgatcccgggtgactggaatggcgctggtgcccacaccaacttcagcaccaagtcgatgagggagccgggaggctacgaggtgatcaagaaggcgatcgacaagctcgcgctgaggcacaaggagcacatcgccgcctacggcgagggcaacgagcgccgcctcaccggccgccacgagaccgccgacatcaacaccttcaaatggggcgtggcgaaccgcggcgcgtccatccgcgtggggcgcgacacggagaaggagggcaaggggtacttcgaggacaggaggccggcgtccaacatggacccatacgtcgtcaccggcatgatcgccgagaccacgctgctgtggaagcagaactaa</cdnaseq>|
AA = <aaseq>MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPI TDVSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPI PTNKRHSAAKIFSHPDVVAEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCA AGAEKAFGRDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVAR YILERVTEVAGVVLSLDPKPIPGDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALR HKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRP ASNMDPYVVTGMIAETTLLWKQN</aaseq>|
DNA = <dnaseqindica>4359..4514#4108..4267#3927..4018#3658..3732#3394..3521#2847..2935#2355..2461#1379..1427#1164..1267#1017..1056#657..730#tggaaaactgacccactatattttgctcctccttttagttgtaaacatccttctggaaatacatatgtgcacaagcacagtgctcacataattcatgagttggacaccagatgaaaaaaaaccccaagaaaataataagtggagtaaacttccatccaacttaagttaccacggtccacggttaattcctattgactacgaacaaattgttttactatgttaaccatgtttttttagacaatagtgtcaaattatcatattacgtatgaatttatgattacacctcttctttctccctgaaaatactgcagcatcctctcgatttgagatgattacttcagtttcttgccacaccagaggtaatccattcccttgatttttgttaaaagataaagataatatagacgctatctttttaaacggccaatatcattattaatcaaataactgaaaaaaaaatgtctctgaatgatacttgcccctacttcgctatccacagttgcgatttgcgacttgcaagcacaccgtagctaacttctctccttctgggtataaatatccctctcctctccctgtttctcctcatccctgcttcctcttctacacctcattttccgcttgcatcttgctcattcagatctcttctgctttgagcaatggccaacctcaccgacctcgttaacctcaacctcagcgactgcagcgacaagatcatcgccgagtacatctggttggcaaacctcctctgcttttgatctgttcttgatttcttatattcgtctgcactagcaagtctcctgctgcactggtgcgttcttcaaggatgcaagatcgcgtttttttgtgcgaaattaatctccatttccctacctatgatcgtcgtggatcgtgaaaattgatgattgttcgcttcctgaattctaccactgatcaaacttttctaccaagtttctttgatacaacaacctgaatgatcttcctcgtctcaaaacgtcatcttttttatttctgttcagggttggaggatcgggcatagacctcaggagcaaagcgagggtgagtgtgtttatctcaacatacaatcctggactcattatgatcactaacactatcacaattctgaattttctcaccatttttgttcttccgttttcatcgagcagactgtgaaaggccccatcaccgatgtgagccagctgccgaagtggaactacgacggctccagcaccgggcaggctcccggcgaggacagcgaagtgatcctctagtatgtatatggccttgttctcatcgtctcttgtgatggttttactttgtagattaccaaaggttctttgtttcttatgccttttaacatttttcttttcttactttgaagccctcaagccattttcaaggacccgttcaggaggggcgacaacatccttgtaagttcctctcacttctcttgtactttttttttgctttgtagctcatgacatattgacactttatgatggccaaaaggaagggaacgaaaggtcctttgcaaacaaaatttgaatgtgtgagatggtagatttgttgtagaaacatattatttcaggcactgttaagtgttaaccttgttgaattgtagcttggtctgaaaaataaaattatgaatatgttaactagtagttaggttattttttctggctgttggatgtgctcgaaacctttagctgtttatcttgctcttagccagcaaactgcctacaccctgatgtagacatgccaaaattcttacatcattgattggcctgctcgtactttatggaattcaactcttgtgtatagatataaattagcctgttagaaacattggccacgaatagcttccgtactccttccgtatcaaaataaaacaatttctggaatttgaaatttattccaaaataaacaccttctatcttcttaactatcgtcaatccgcaaagcaagaagttttattacctcaatacccccgacctaccagtaaatcaatacaactttcacattaattgagggcattgtggtttctgtttctctccttaaaattttctttggatgttagggtttaagttagggagaaagggggtagatgtacttcattcagcttaaagcagtaactgcatagcccttaattttcaactatgcctaagtttatttccaaactttttttttaaactttcaacttttccatcacatcaaaactttcctacacacacaaactttcaacttttccgtcacatcgttccaatttcaatcaaacttttaattttggcgtgaactaaacataccctatatcgggaagtcgctggtttgcttacttttttaatttaatgttactataggtgatgtgcgactgctacacgccacaaggtgagccaatccccactaacaagaggcacagtgccgccaagatcttcagccaccctgatgttgttgctgaggtgccatggtaagaaccgttctctccagattattaaagtatttttgcatacgacttaattaaaattttaactccgttgttaaaaaaaatccttgtttccaataaatataagcatgtcagaactttcaagttctgaaacgattgttatattcaccaagtgatttaaattactacttggtgagtagtaatctagatcatttttgttgacacaaatataatagtttagtttagtttatcaaatagctaaatatgaaaactaaaagttttcaaggccgttcaaaataaaaaaaagtttttaaggaccaccaaatgtggagacccccaaatctatatctactttactatcttatctgctataccattctcataaggttttatctctgaatccaaacaggtacggtattgagcaggagtacacactccttcaaaaggatgtgaactggccccttggctggccagttggtggcttccctggcccacaggcaagaaatcactgctcaaaatattcatagttactccatagaatttagggcattagaatcttcattaaaatagactttgtttggtagtattgttgtgaatttttcaacaaaaatgttcttgctttacccaatagaaacaatgtttgaaagagtttgaaagaggagtaacatcctactattgcaaattatataaaaccaagctatgtgatgtacgtgaatgtgatgtcagaatttgaaaaatcaaagccacacttgcagtttttattaatctatggtagttgacttgctgaaaatttacaaatccttaaattgccacttgagccttatagggacttaactgaaaaaagaccagctctagtgtcatgaatagcaattagatatgcttgtgtcggtaatattttcccataaaatcctctgtaattttctgaactttgttctgaattttttttctctctcagggaccatactactgcgctgccggtgccgaaaaggcgttcggccgcgacatcgtggacgcccactacaaggcctgcatctacgccgggatcaacatcagtggcatcaacggggaagtcatgcccggccaggtacttccaacgaaatctccatattgttctcttcatcttatcaccaccgggctccatgtaccatagtatggcacatgaacacgacggctgatacgtgtgctaattctgattctgaatcggattctgtgggtgacagtgggagttccaagttggcccgtcagttggcatcgccgctgctgaccaagtgtgggttgcccgctacatcctcgaggtacgtacaaatcatatcctgatatgatatattatattattctcggctagcttggattaatcggaataagcatcgcgacaagtacaccgctcaactgcgagcagtatatgttccagttctgcaatgttactacatcttaattaattagtacgttgaggtttagctgaacttttgtcgtggttgattggttccagagggtcacagaggtggccggagtcgtgctctcccttgacccgaagccgatcccgggtgactggaatggcgctggtgcccacaccaacttcaggtagcagcagtaacaattttctagctctctgatgctgtgagtgagctgcaacacaggtggtttatgtgtgcattttgtgcattttgcagcaccaagtcgatgagggagccgggaggctacgaggtgatcaagaaggcgatcgacaagctcgcgctgaggcacaaggagcacatcgccgcctacggcgagggcaacgagcgccgcctcaccggccgccacgagaccgccgacatcaacaccttcaaatgggtacgtgtatacacgcatacgcccgccgttcgtcgatcgatcggctagcctaccatgagatcataacctttttttgcgtgcgtgcgtgcagggcgtggcgaaccgcggcgcgtccatccgcgtggggcgcgacacggagaaggagggcaaggggtacttcgaggacaggaggccggcgtccaacatggacccatacgtcgtcaccggcatgatcgccgagaccacgctgctgtggaagcagaactaagccgtccggcgggcctctcccgtgcatttctgcgcccaaaaaaaacaaaaaaaagaaacgtacgcgtgcgtgcatcagccgtgatgtgtcaacgttggatttcggtctcggtctatccttggcgtcgacaaggccctttgaattttattactagtctgtcctgttcaccgagtgtcattttgtgtactctgaataataatgctttgtaaaacggatttgctttttccgtagggacggatgttcttgattttcctatatcgtgatttatatatatg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055959.2 RefSeq:Os03g0223400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene ''Os03g0223400'' was reported as '''''OsGLN1_2''''' in 2015<ref name="ref1"/>, '''''OsGS1;2''''' in 2007<ref name="ref2"/>, 2005<ref name="ref3"/> and 2009<ref name="ref4"/>, respectively.
 ==Annotated Information==
 ===Function===
-Please input expression information here.
+*Consequently, ''Tabuchi et al.'' re-named the previous two genes as ''OsGS1;1'' for ''OsGS1'' and ''OsGS1;2'' for '''''OsGSr'''''<ref name="ref3"/>.
 ===Expression===
-Please input expression information here.
+*''OsGS1;2'' transcripts were also detected in all organs, with '''higher expression''' in the '''root''' following the supply of NH<sup>4+</sup> at the seedling stage, while ''OsGS1;3'' was specifically expressed in the spikelet. The ''OsGS1;1'' and ''OsGS1;2'' transcripts showed reciprocal responses to NH<sup>4+</sup> supply in the surface cell layers of roots<ref name="ref2"/>.
 ===Evolution===
-Please input evolution information here.
+'''Two homologous''' but '''distinct mRNA sequences''' of rice cytosolic isoenzymes of GS (named ''GS1;1'' and ''GS1;2'', '''83% nucleotide homology''' and '''85% amino acid homology''' within the coding region) were found in NCBI GenBank database, and two EST clones encoded ''GS1;1'' and ''GS1;2''<ref name="ref4"/>.
-You can also add sub-section(s) at will.
+*Higher ''GS1;2'' mRNA transcripts in ''GS1;2''-overexpressed plants can accelerate the reduction from NO<sub>3</sub><sup>-</sup> to NH<sup>4+</sup> to decrease the nitrate level in cells, and higher ''GS1;1'' mRNA transcripts in ''GS1;1''-overexpressed plants can accelerate the translocation of NO<sub>3</sub><sup>-</sup> and NH<sup>4+</sup> from root to leaf to increase both the NO<sub>3</sub><sup>-</sup> and NH<sup>4+</sup> levels. The increased total levels of leaf free NO<sub>3</sub><sup>-</sup> and NH<sup>4+</sup> in ''GS1;2''- and ''glnA''-overexpressed plants could be due to the higher GS mRNA transcripts and total GS activities, which can accelerate the nitrogen absorption and reduction ability in plants<ref name="ref4"/>.
 ==Labs working on this gene==
-Please input related labs here.
+*National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

@@ Line 3: / Line 3: @@
 ==Annotated Information==
 ===Function===
 ===Expression===

@@ Line 3: / Line 3: @@
 ==Annotated Information==
 ===Function===
 ===Expression===

@@ Line 3: / Line 3: @@
 ==Annotated Information==
 ===Function===
-Please input function information here.
+Glutamine synthetase in higher plants, the enzyme responsible for primary and secondary assimilation of ammonia, exists as several distinct isoforms in different organs,tissues and subcellular locations.
 ===Expression===

← Older revision		Revision as of 19:31, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0223400\|		GeneName = Os03g0223400\|

@@ Line 62: / Line 62: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]