Os03g0230300 - Revision history

Rice2012: /* Structured Information */

2015-06-12T05:37:02Z

‎Structured Information

Zhangye at 07:19, 3 March 2015

2015-03-03T07:19:19Z

124.16.129.48 at 19:31, 22 July 2012

2012-07-22T19:31:28Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0230300| Description = Poly(ADP-ribose) polymerase, catalytic region domain containing protein| Version = NM_001055991.1 GI:115451710 GeneID..."

2012-06-24T12:27:54Z

Created page with "{{JaponicaGene| GeneName = Os03g0230300| Description = Poly(ADP-ribose) polymerase, catalytic region domain containing protein| Version = NM_001055991.1 GI:115451710 GeneID..."

New page

{{JaponicaGene|
GeneName = Os03g0230300|
Description = Poly(ADP-ribose) polymerase, catalytic region domain containing protein|
Version = NM_001055991.1 GI:115451710 GeneID:4332145|
Length = 3171 bp|
Definition = Oryza sativa Japonica Group Os03g0230300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:6944503..6947673|
CDS = 6944595..6945496,6945827..6946074,6946156..6946298,6947236..6947334|
GCID = <gbrowseImage1>
name=NC_008396:6944503..6947673
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:6944503..6947673
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggacttctccggcgacgtcaagccggcgatccaccggccctctgtcgcggcggcacgcgggggagggaacggtggggcgatcccgctcctgcgtgggtggcaggcgttccggaggagcggcgcgccggcgaggctcctctgcttcgagggcggcgcgtgggcggacgtcgcgggcgaggtggtggggctgctgcggcgggcgttcatggaggggaaggccgtttgcgaggccgcctgcggtgggagggtgttcctgttcgacttcatgcggatggttcggatcgatgaggccaccgccgaggaggccgcgctggggtggatcgacgaccgcggcgcgtgcttcttcccggctcccgagggcgggaggaagaggaagagggagagggacgaggcggggtcggaggtgaagggggaggatcggcggcggcggcagccggcggcggaggaggaggacggggacgaggcgtcgtccggcgtggaggagcggtccggggagagccgccccgaggcggatgagcccgacaggaagaaggcgcgcgggacgttgtgggggaaggcggtgaggctggacgaggcggacaagttctacaaggtggtggagaagctcttcgtcagccggatggctcccgtggcggcggcccgcggcgtggcgatcacggcggtgcacaaggtcgcgcaggggccccgggcaagagccttccatctgcagggacagctccttgccgctgctcgcggcgtcggcgatggcagcaacgccaagttcgcgtggtacggcgcgccggcggcggatgtggccgcggcggtggagcacggcttcgggaggacgaacgggcagtttctcggcgggcgcgcacacggcgacggcgttcacctttcgccgccgcagtaccctcacgctagtgcgatgctgaccaagccagacgagaatggcgaggcacacatcgtgctgtgccgcgtcctgatgggccgtccagaggccgtccctgccagctcaccccaattccaccccagcagcgacgaatacgacagcgccgtcgacaaccttgagaatccgcggtggtacgttgtatggagcacagacatgaacaccaggatcctcccagagtacgtggtcagcttcaggtggcccaacctgccgcagatggaaggatcatcggggttgggatcgaagctgaagaagccatcaccagcagctactcgcgacatgttccctatgcttctgacggagatccagcggttcgttccatccccgaagctgcagactttgcagaggacgtacaactgcttcaagagaggacagatgaagaaggaccagttcatccggttcttgcgctcccacatcggcgacaatgtgttgaccaccgtggccaagaaactccgagggtactag</cdnaseq>|
AA = <aaseq>MDFSGDVKPAIHRPSVAAARGGGNGGAIPLLRGWQAFRRSGAPA RLLCFEGGAWADVAGEVVGLLRRAFMEGKAVCEAACGGRVFLFDFMRMVRIDEATAEE AALGWIDDRGACFFPAPEGGRKRKRERDEAGSEVKGEDRRRRQPAAEEEDGDEASSGV EERSGESRPEADEPDRKKARGTLWGKAVRLDEADKFYKVVEKLFVSRMAPVAAARGVA ITAVHKVAQGPRARAFHLQGQLLAAARGVGDGSNAKFAWYGAPAADVAAAVEHGFGRT NGQFLGGRAHGDGVHLSPPQYPHASAMLTKPDENGEAHIVLCRVLMGRPEAVPASSPQ FHPSSDEYDSAVDNLENPRWYVVWSTDMNTRILPEYVVSFRWPNLPQMEGSSGLGSKL KKPSPAATRDMFPMLLTEIQRFVPSPKLQTLQRTYNCFKRGQMKKDQFIRFLRSHIGD NVLTTVAKKLRGY</aaseq>|
DNA = <dnaseqindica>93..994#1325..1572#1654..1796#2734..2832#acttgatcccgatcgccatttctccacctgcacatctgcgcgcgcgcgcgggagagcagaggcggcgagagagatccgggtcgggaggggtgatggacttctccggcgacgtcaagccggcgatccaccggccctctgtcgcggcggcacgcgggggagggaacggtggggcgatcccgctcctgcgtgggtggcaggcgttccggaggagcggcgcgccggcgaggctcctctgcttcgagggcggcgcgtgggcggacgtcgcgggcgaggtggtggggctgctgcggcgggcgttcatggaggggaaggccgtttgcgaggccgcctgcggtgggagggtgttcctgttcgacttcatgcggatggttcggatcgatgaggccaccgccgaggaggccgcgctggggtggatcgacgaccgcggcgcgtgcttcttcccggctcccgagggcgggaggaagaggaagagggagagggacgaggcggggtcggaggtgaagggggaggatcggcggcggcggcagccggcggcggaggaggaggacggggacgaggcgtcgtccggcgtggaggagcggtccggggagagccgccccgaggcggatgagcccgacaggaagaaggcgcgcgggacgttgtgggggaaggcggtgaggctggacgaggcggacaagttctacaaggtggtggagaagctcttcgtcagccggatggctcccgtggcggcggcccgcggcgtggcgatcacggcggtgcacaaggtcgcgcaggggccccgggcaagagccttccatctgcagggacagctccttgccgctgctcgcggcgtcggcgatggcagcaacgccaagttcgcgtggtacggcgcgccggcggcggatgtggccgcggcggtggagcacggcttcgggaggacgaacgggcagtttctcggcgggcgcgcacacggcgacggcgttcacctttcgccgccgcagtaccctcacgctaggtgagtttcccaaatgctttcaactctttccatctgcaaatgctttgaactattggggagaacatttttagtaatttctgaaaattcaccaagtgcctcatatatttcatctttcgatattaccatacgaatcttgagtaaaattattttctgcctgccatcttggtgctaaacaatgaaactaccaatcgttgttttgcatctaagtttgaatttagagcaaattagacagtatggtacagtagctacctaaattgttataaattgggatgaaatttgtgagtcaatgttcaactaagttaacgagttaattaacttgtcttcgagcagtgcgatgctgaccaagccagacgagaatggcgaggcacacatcgtgctgtgccgcgtcctgatgggccgtccagaggccgtccctgccagctcaccccaattccaccccagcagcgacgaatacgacagcgccgtcgacaaccttgagaatccgcggtggtacgttgtatggagcacagacatgaacaccaggatcctcccagagtacgtggtcagcttcaggtggcccaacctgccgcagatggaaggttggtctctcgtgtctgaaatttgctggatggaactgttcccatttggcactgccataacagtgaaactgtggttttcaggatcatcggggttgggatcgaagctgaagaagccatcaccagcagctactcgcgacatgttccctatgcttctgacggagatccagcggttcgttccatccccgaagctgcagactttgcagaggacgtacaactgcttcaaggtaaactggtacttcttgctgagcatttcatttctagatagatgattgattagaatcttgcgctagcttacacaaaacaaccccttcgcgcttatgatcatgcctgtaagtcaaaatttaatataagagttgattttgtggtttttttagttgtttattttaccgcatgaacacgtataaaaaaggttttactatacctttttttggttaataaattgtttggataagtaaaagcgaaacaatgggctgaaacacaactgctgatctgctaggtgaatttaggccctgtttaattcagcttaggattattataatctggattattaggattaagctgaaacaaataagtagattattatgttagattattataatttataagccagattactataatataataatctcctctagaggagcttagattactataatctaataatctcctctagagaagctttttctagattattgagtagctaaagacccactacccttagatgcctctaataatccagagaaacaaacaactcgtagcttattttatgttagcttattataattcagcttagagtaatctgatttaataatttagattacaataatcttaagctgaaacaaacggggccttagtcttacatatagttgaacaattttgctctgcctggtttgtgttgtattcaggtctaactcttcactatacgcaataattagcacgtaaaaatgttgatttgtaccgcactgctatggttttaatatgatcatgccgactttattctgtagtaatatgctgccgactttattctgtagtagaacagaatcatctacctgtcaatattctgtgcaaagcgaattcagctcagcataacggcgttataactttaagcgaagctgaagtcctgaaaatccaatgacataaattttctttttgtttcagagaggacagatgaagaaggaccagttcatccggttcttgcgctcccacatcggcgacaatgtgttgaccaccgtggccaagaaactccgagggtactagtgcaaggtgcaaatttgtctccactccgtggctgaattcgactaactccgtagaatcgaacagtgcgtgtcgtgtaccaatcctgacagggtttattctcttctgatgctgctttagtttttccggtgctcaaatgtttattgtcatgaacatagagggggtttactgtgatcttccaattaaccaacacaaaagggtatatgtgatatgatgcaaattatgcaattcttgagttcggtcatagttttacttattttcagcaacttgtaatttgtacagactcgattctgttgagcttttgattcaggaaacaatcaattcagtttcgggagtttacgg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055991.1 RefSeq:Os03g0230300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+''Os03g0230300'', a rice '''homologue of SRO''', termed as '''''OsSRO1c''''', responds to '''multiple abiotic stresses'''<ref name="ref1"/><ref name="ref2"/>.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+*''OsSRO1c'' was identified as a '''direct target gene of ''SNAC1''''' (stress-responsive NAC 1) involved in the regulation of '''stomatal aperture''' and '''oxidative response'''. ''SNAC1'' could bind to the promoter of ''OsSRO1c'' and activate the expression of ''OsSRO1c''<ref name="ref1"/>. ''OsSRO1c'', a rice '''SRO gene''' which functions '''downstream''' of the stress-responsive transcription factor ''SNAC1'', is the major stress-responsive gene in the rice SRO family<ref name="ref2"/>.
 ===Expression===
-Please input expression information here.
+*''OsSRO1c'' was induced in '''guard cells''' by '''drought stress''', the expression of ''OsSRO1c'' is mainly regulated by ''SNAC1''. ''OsSRO1c'' overexpression led to decreased stomatal aperture and reduced water loss. OsSRO1c-overexpressing rice showed increased sensitivity to oxidative stress. Expression of ''DST'', a reported zinc finger gene '''negatively regulating''' H<sub>2</sub>O<sub>2</sub>-induced stomatal closure, and the activity of H<sub>2</sub>O<sub>2</sub>-scavenging related enzymes were significantly suppressed, and H<sub>2</sub>O<sub>2</sub> in guard cells was accumulated in the overexpression lines<ref name="ref1"/>.
 ===Evolution===
-Please input evolution information here.
+[[File: OsSRO1c phylogenic1.jpg|left|thumb|300px|'''Figure 1.''' ''Phylogenetic tree of SRO proteins in Arabidopsis and rice.(from reference <ref name="ref1"/>).'']]
-You can also add sub-section(s) at will.
+*The SROs are a highly conserved family of plant specific proteins. Sequence analysis of the RST domain implicates a highly preserved protein structure in that region. This might have implications for functional conservation<ref name="ref3"/> .
 ==Labs working on this gene==
-Please input related labs here.
+*National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, 430070, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

← Older revision		Revision as of 19:31, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0230300\|		GeneName = Os03g0230300\|

@@ Line 76: / Line 76: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]