Os03g0319400 - Revision history

192.168.72.52: /* Structured Information */

2015-06-12T05:49:08Z

‎Structured Information

Zhangye at 10:19, 28 January 2015

2015-01-28T10:19:51Z

Zhangye at 10:18, 28 January 2015

2015-01-28T10:18:54Z

124.16.129.48 at 19:34, 22 July 2012

2012-07-22T19:34:32Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0319400| Description = CIPK-like protein 1 (EC 2.7.1.37) (OsCK1)| Version = NM_001056484.1 GI:115452696 GeneID:4332665| Length = 5426 bp| ..."

2012-06-24T12:36:19Z

Created page with "{{JaponicaGene| GeneName = Os03g0319400| Description = CIPK-like protein 1 (EC 2.7.1.37) (OsCK1)| Version = NM_001056484.1 GI:115452696 GeneID:4332665| Length = 5426 bp| ..."

New page

{{JaponicaGene|
GeneName = Os03g0319400|
Description = CIPK-like protein 1 (EC 2.7.1.37) (OsCK1)|
Version = NM_001056484.1 GI:115452696 GeneID:4332665|
Length = 5426 bp|
Definition = Oryza sativa Japonica Group Os03g0319400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:11577188..11582613|
CDS = 11577293..11577376,11577468..11577542,11577622..11577678,11577815..11577928,11578073..11578183<br>,11578277..11578399,11578693..11578782,11578863..11578988,11579092..11579145<br>,11579239..11579319,11579401..11579508,11579627..11579698,11579806..11579868<br>,11580778..11580969|
GCID = <gbrowseImage1>
name=NC_008396:11577188..11582613
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:11577188..11582613
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgtatagggctaagagggctgcattatctccaaaggtgaagcgccgtgtagggaagtatgagctcgggcgcaccattggagaaggaacctttgcaaaggtccggtttgcgaagaacactgaaaatgacgaaccagttgctatcaaaatccttgacaaggagaaggttcagaagcacagattggttgaacagattaggcgtgaaatttgtactatgaagttagtaaagcatcctaatgttgttcggctgttcgaggtcatgggaagtaaagcaagaattttcattgttctggaatatgttactggaggagagctctttgaaatcattgcaactaatggaaggttgaaggaggaggaagcacgaaaatactttcaacaacttatcaatgcagttgactactgccacagtaggggtgtgtaccacagagacttgaagttagaaaatttgctgcttgatgcttctggaaacctgaaagtatctgactttggtttgagtgctttaaccgagcaagtgaaggctgacggtttgctgcacacgacatgtggaactcctaattatgttgctccagaggtgattgaggacagaggctatgatggggcagctgcagatatctggtcttgtggggtaatcctttatgttctgcttgctgggtttttaccatttgaggatgacaacatcattgctctttataaaaagatctctgaagctcagtttacctgtccctcttggttttctactggagctaagaagctgatcaccagaattctggatcccaaccctacaactaggatcaccatttctcaaatactggaagatccttggttcaaaaagggttacaaaccgcctgtatttgacgagaaatatgaaactagttttgacgatgtcgatgctgcttttggagactccgaagaccggcatgtcaaagaagaaactgaagatcagcctacctctatgaacgcgtttgaactcatttcactgaatcaggcactgaatctggacaatttgttcgaggcaaaaaaggagtataaaagagagacaagattcacatcacaatgtcctccaaaagaaattatcaccaagattgaagaagctgcaaagccacttggatttgatattcaaaagaaaaattacaagatgcgcatggagaacctgaaagcaggtagaaaaggcaatctcaatgttgcaactgaggttttccaagtagctccatccttacatgtggttgagctcaagaaggcaaagggggacactctggagttccaaaagttctacagaaccctgtcgacccagctcaaggacgtggtctggaagtgcgacggcgaggtcgaaggcaacggcgccgcggcgtga</cdnaseq>|
AA = <aaseq>MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDE PVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTG GELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVS DFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGF LPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFK KGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDN LFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNL NVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA</aaseq>|
DNA = <dnaseqindica>5238..5321#5072..5146#4936..4992#4686..4799#4431..4541#4215..4337#3832..3921#3626..3751#3469..3522#3295..3375#3106..3213#2916..2987#2746..2808#1645..1836#gtttcctcctgttcttgagagaactgaatctgctgtccagctgctgctccggctggtctctgagttgaaggtaaggttaatcggtgtctctcagcctgaatgaatttgtctatctcctatggctttgtggtggttgaattttgcgttctggggatgttaggaccttcttgttgggacaatttctgagattctggcttgctttggatgggttgggggaagagttaggtgcttgctggtgtgtatttcttttgcatttcggttgtcctgtgaaggatgcgtgttctcggcatttccagctcattgtgtctttgcccttcagataacagttatcctcgtgcttttcctttttctttcagcaaaacatatctggacttctgtacaagtgctttttttttcttctttggacgatattttgttttgcattctagtgattctgtacaagtgccatctgatagcatatcatcattcggcaactggtgatttcccctatgcggtctttcatgtacttgcatgattgaacatatggcagtgcttctgtcggatgctatcgatgttttacttgcgaaaggccggggaactttttgcagatcttgaggtttttagtagtgatgcagtcattcaaaaagataaccttgtgctggtccttttgcctttcggctgcacttgcatgtgcgttttctcagagatgctgcatctccagctcagcttctgtcatcagtcattagtcattgccatcttttatgtggataaagtcaaagttaatttagcaccgctgttttggagttgtttggtcattttatatattttcatcaggtgttgtttactgttcctggtactaaaatttcgaatttacaaatgactacctcattctcctttctttttttcctttttccttgtggcagaccggttcctgaaagaatattcttttcatgaaatgtacttccggttttttaaatagaatgattaaattacagtaggatgaataactaaatttgtcgatatgccttgtaccggtactccttgttagttcttagtgaatctatgtatactattgcttgtcaaattgtgaattttactatcagctgtatgtatgtctattgaagaactctcaacagttctaacttcctaagatgttttaatcaattcttgctaccaacctggatacagtattctccgtagttttttcttcattttttttttaaagagatctattgagagtccttggtacccatcttctgtagaattgtccatgtgaacagttgcttcaagatttctgctgcatctgtgatacggtatcactgatactgtagtgatcagatccaaaacacatatatagttcgccaccattctaaaacacatgtttgtgtgatcagatctagctcgccaccatatatagttcaggttttcaagttgtaatatcacttgccttttgcgatagatatgacaacacactttgtgtcaggctgtcccaattttctctgaattttctctcatatatcatgatttagttatggcttttgttccttgacatttcaatgtctaattgtccaatgttaagtaaatccttttcatagcctgatttattgaatacttgcaggtacttgaataacttgaaggttcctaggaaccttcatttgttggaagatgtatagggctaagagggctgcattatctccaaaggtgaagcgccgtgtagggaagtatgagctcgggcgcaccattggagaaggaacctttgcaaaggtccggtttgcgaagaacactgaaaatgacgaaccagttgctatcaaaatccttgacaaggagaaggttcagaagcacagattggttgaacaggtcattctcaggcatttattttttggagcaattctcaatcaattcccttataaggcattgcatcagtttttttatcaatcactgtgttcgtccaatatctttaattcatatatcagactaacctctgtgattcagtccactaggaatatccttttttgaggtaaacagtccactaggaataaagtggtcaaaaatcgaagtttcctatatcgctttcagtaaaccatacagccaatcttaccatcatttgtaatagtcaacaaagtttacctcccaaaaaaatgtatgtttcttacgtaattgaccacatgtgtaattgaaatatgtgattttctttcatcaacatttactacaatcaacttgcatctttgtatcaaggaacaaaactgaagaaaaaattttcttccttggatgttgccgtgccagcatgggagcataggaagatgtaacttcaattaagaatgattccgtgtccacatgactacgtacatatttgcatgacatcgagatatacccaaatggtgatcttccagttgaagtcatattaccaactcagtatgttctcctggtgccttgtgctgtttctaattgctgtcaactttatgaaaagttgaagtaaaaagaaaggacctcattttgtacaattcaagatatgttttgcccatgccacatggatgttcatgttctcaattccattgaataggctttgctcttcattatactgttctaaccatagagattttagacacagaataacattagatgcaaaagttgtggttagaactcataacacaaatgtatagttttacatatgtgcaattccaaggaacaaatcacatatacatttttgaaaggaagaaattatttatttgatatttttatgctcatgccattctaaattcaatgcagattaggcgtgaaatttgtactatgaagttagtaaagcatcctaatgttgttcggctgttcgaggtaaagtcacaaagtggcctgcacttcatgatttatcaaacctcttaaaaatatgtttattcatgccaacagtaataaccttaggctgaaaaatatgtctacctcaggtcatgggaagtaaagcaagaattttcattgttctggaatatgttactggaggagagctctttgaaatcattgtaagtgccaatttgagatctaaaacttatgaaaggattgcccgatgtcagaatattgattcatggtatattatcatgttatgttgattttaactgacattatataccaattacaaaggcaactaatggaaggttgaaggaggaggaagcacgaaaatactttcaacaacttatcaatgcagttgactactgccacagtaggggtgtgtaccacagagacttgaaggtaaaggcttaacgtcctgatcatgaacaagtgagcaacaactgttatgagcatatgctgatctttaacatgcgttttcagttagaaaatttgctgcttgatgcttctggaaacctgaaagtatctgactttggtttgagtgctttaaccgagcaagtgaaggtatcataatgttctcaataatagttgcgttgttgttcttgtttggccttttaaattatcactggtctgatattattgaattcacctatacaggctgacggtttgctgcacacgacatgtggaactcctaattatgttgctccagaggtaatcttttttttcttgtcatagtagattagtattacacatgttgattgcacattggcactacattaacatttctaacatagtgtttgatctgttcctgtaggtgattgaggacagaggctatgatggggcagctgcagatatctggtcttgtggggtaatcctttatgttctgcttgctgggtttttaccatttgaggatgacaacatcattgctctttataaaaaggtaatacatacaaaaactatacaaaacacccaggttttgtgaatgccaattattttttcttactctcttctcgatcacagatctctgaagctcagtttacctgtccctcttggttttctactggagctaagaagctgatcaccagaattctggatcccaaccctacaactgtaagcttcgtataaattttgagatcttattgctcaaaggactcagatatacagtaggctaaaacatatctaaacagaactacaagcattttgagcaagcaataatcagtcgtggaacgaatgtggttttatgcgtctatgactaggtggatctttcacattgaaatgaaatttgtttacaaccttgcatcttttattgtttaaccgagtcgttctgttaaccttttcaattccaaaaagtagtcattgaaccccaatttacctgatttctgccattgttgaattttgtgcagaggatcaccatttctcaaatactggaagatccttggttcaaaaagggttacaaaccgcctgtatttgacgagaaatatgaaactagttttgacgatgtcgatgctgcttttggagactccgaagtgagtcaattggactatttatttcaaaacattcagcctcttgtggtaggaataagaggattaacttttttttatacatttaccgattaacaggaccggcatgtcaaagaagaaactgaagatcagcctacctctatgaacgcgtttgaactcatttcactgaatcaggcactgaatctggacaatttgttcgaggcaaaaaaggtcagataattctgctccaattagtaaagtatattataaccctttcaatattatagttccccatttttcagaaccagtttgtttttgtgaagtattttaaaaactatcattgcagtggactaattagtgcaaatattgttacaggagtataaaagagagacaagattcacatcacaatgtcctccaaaagaaattatcaccaagattgaagaagctgcaaagccacttggatttgatattcaaaagaaaaattacaaggtattcatatagcctactatgtgcacagagaaacttctcttactactcccacatacatcaaaagttatcaggaaataaagttcttacaaccgacttccatacctcgagtcctactaagtttgtttgttcactccagatgcgcatggagaacctgaaagcaggtagaaaaggcaatctcaatgttgcaactgaggtaagttgaaaccccattctaacaaaatactgaaaacatcaaggaaccactgttcactgagatttatgaccaataataggttttccaagtagctccatccttacatgtggttgagctcaagaaggcaaagggggacactctggagttccaaaaggtgccattctttgacaccggaaatttcgctatttccaacttgctatttactgccaagtttaaccaaaatcaattctgctgtgaaacaacagttctacagaaccctgtcgacccagctcaaggacgtggtctggaagtgcgacggcgaggtcgaaggcaacggcgccgcggcgtgaacgtggtttttgccatggctttcggggcaccggttcttcgtgtacatagctgctctgccatcatcaatggggtgttcgccgtagagtagctttttgtaacaagag</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056484.1 RefSeq:Os03g0319400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

← Older revision		Revision as of 10:19, 28 January 2015
Line 2:		Line 2:

	==Annotated Information==		==Annotated Information==
		+	===Function===
	*''OsCK1'' is involved in responses to '''diverse signals'''. Deletion of the '''C-terminal region''' from ''OsCK1'' significantly '''decreased autophosphorylation activity''' without affecting the ability for substrate phosphorylation, which suggesting that the '''CBL/CIPK''' or '''SCaBP/PKS signaling pathways''' recently found in ''Arabidopsis'' may also exist in rice and function in '''cold response''' in which '''calcium signal serves as a second messenger'''<ref name="ref1"/>.		*''OsCK1'' is involved in responses to '''diverse signals'''. Deletion of the '''C-terminal region''' from ''OsCK1'' significantly '''decreased autophosphorylation activity''' without affecting the ability for substrate phosphorylation, which suggesting that the '''CBL/CIPK''' or '''SCaBP/PKS signaling pathways''' recently found in ''Arabidopsis'' may also exist in rice and function in '''cold response''' in which '''calcium signal serves as a second messenger'''<ref name="ref1"/>.

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice ''Os03g0319400'' was reported as '''''OsCK1'''''<ref name="ref1"/> in 2003, '''''OsCIPK3(OsCIPK03)'''''<ref name="ref2"/> in 2007, and  '''''OsCIPK31'''<ref name="ref3"/>in 2010, respectively.
 ==Annotated Information==
-===Function===
+*''OsCK1'' is involved in responses to '''diverse signals'''. Deletion of the '''C-terminal region''' from ''OsCK1'' significantly '''decreased autophosphorylation activity''' without affecting the ability for substrate phosphorylation, which suggesting that the '''CBL/CIPK''' or '''SCaBP/PKS signaling pathways''' recently found in ''Arabidopsis'' may also exist in rice and function in '''cold response''' in which '''calcium signal serves as a second messenger'''<ref name="ref1"/>.
-Please input function information here.
 ===Expression===
-Please input expression information here.
+*Expression of the ''OsCK1'' gene was detected '''mainly''' in the '''shoots''' and '''highly inducible''' by '''diverse signals''' such as '''cold''', '''light''', '''salt''', '''sugar''' and '''cytokinins'''. In addition, '''calcium increased''' the ''OsCK1'' transcript level, whereas a calcium ionophore, A23187, partially abolished stimulus-induced expressions. ''OsCK1'' phosphorylated itself and a generic substrate, myelin basic protein, in the preference of '''Mn<sup>2+</sup>'''<ref name="ref1"/>.
 ===Evolution===
-Please input evolution information here.
+*Sequence analysis indicated that the open reading frame of the ''OsCK1'' gene consists of 1350 bp encoding 449 amino acid residues, which is very '''similar to''' a family of calcineurin B-like protein ('''CBL''')-interacting
-You can also add sub-section(s) at will.
+*As a plant-specific Ca<sup>2+</sup> sensor relaying pathway, the CBL–CIPK pathway has some crosstalk with other signaling pathways. In addition, research has shown that there is crosstalk between the CBL–CIPK pathway and the low-K<sup>+</sup> response pathway, the ABA signaling pathway, the nitrate sensing and signaling pathway, and others<ref name="ref5"/>.
 ==Labs working on this gene==
-Please input related labs here.
+*National Center of Plant Gene Research (Wuhan), National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

← Older revision		Revision as of 19:34, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0319400\|		GeneName = Os03g0319400\|

@@ Line 79: / Line 79: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]