Os03g0388600 - Revision history

192.168.72.52: /* Structured Information */

2015-06-12T05:53:28Z

‎Structured Information

Tianyajuanke: /* Labs working on this gene */

2014-06-01T06:53:51Z

‎Labs working on this gene

Tianyajuanke: /* Labs working on this gene */

2014-06-01T06:53:26Z

‎Labs working on this gene

Tianyajuanke: /* Evolution */

2014-06-01T06:52:38Z

‎Evolution

Tianyajuanke: /* Expression */

2014-06-01T06:51:36Z

‎Expression

Tianyajuanke: /* Expression */

2014-06-01T06:51:18Z

‎Expression

Tianyajuanke: /* Expression */

2014-06-01T06:50:54Z

‎Expression

Tianyajuanke: /* Expression */

2014-06-01T06:49:11Z

‎Expression

Tianyajuanke: /* Expression */

2014-06-01T06:48:53Z

‎Expression

Tianyajuanke: /* Expression */

2014-06-01T06:48:28Z

‎Expression

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

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 ==Labs working on this gene==
-.Key Laboratory of Biology and Genetic Improvement of Maize in Southwest Region of Ministry of Agriculture, Maize Research Institute of Sichuan Agricultural University, Chengdu, Sichuan 611130, China
+. Key Laboratory of Biology and Genetic Improvement of Maize in Southwest Region of Ministry of Agriculture, Maize Research Institute of Sichuan Agricultural University, Chengdu, Sichuan 611130, China
-.Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China
+. Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China
-.Department of Plant and Environmental Sciences, Norwegian University of Life Sciences, PO Box 5003, Ås N-1432, Norway
+. Department of Plant and Environmental Sciences, Norwegian University of Life Sciences, PO Box 5003, Ås N-1432, Norway
-.Department of Food and Bioproduct Sciences, University of Saskatchewan, Saskatoon, SK, Canada, S7N 5A8
+. Department of Food and Bioproduct Sciences, University of Saskatchewan, Saskatoon, SK, Canada, S7N 5A8
 ==References==

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 ==Labs working on this gene==
-Key Laboratory of Biology and Genetic Improvement of Maize in Southwest Region of Ministry of Agriculture, Maize Research Institute of Sichuan Agricultural University, Chengdu, Sichuan 611130, China
+.Key Laboratory of Biology and Genetic Improvement of Maize in Southwest Region of Ministry of Agriculture, Maize Research Institute of Sichuan Agricultural University, Chengdu, Sichuan 611130, China
-Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China
+.Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China
-Department of Plant and Environmental Sciences, Norwegian University of Life Sciences, PO Box 5003, Ås N-1432, Norway
+.Department of Plant and Environmental Sciences, Norwegian University of Life Sciences, PO Box 5003, Ås N-1432, Norway
-Department of Food and Bioproduct Sciences, University of Saskatchewan, Saskatoon, SK, Canada, S7N 5A8
+.Department of Food and Bioproduct Sciences, University of Saskatchewan, Saskatoon, SK, Canada, S7N 5A8
 ==References==

← Older revision		Revision as of 06:52, 1 June 2014
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	In general, the dN/dS values of individual clades were lower than that of the subgroups. However, the dN/dS values of some individual clades were higher than that of the subgroups, and the number of residues under significant negative selection was reduced (P < 0.05). However, no clades showed dN/dS values >1, suggesting that different clades were subjected to different strengths of purifying selection. For example, in TBP-like subgroup clades, the dN/dS values ranged from 0.06 to 0.32, while in CCA1-like/R-R subgroup clades, the dN/dS values were <0.11. Thus, our dN/dS analysis suggests that selective constraints have remained stable throughout the evolution of MYB-related genes in land plants.[12]		In general, the dN/dS values of individual clades were lower than that of the subgroups. However, the dN/dS values of some individual clades were higher than that of the subgroups, and the number of residues under significant negative selection was reduced (P < 0.05). However, no clades showed dN/dS values >1, suggesting that different clades were subjected to different strengths of purifying selection. For example, in TBP-like subgroup clades, the dN/dS values ranged from 0.06 to 0.32, while in CCA1-like/R-R subgroup clades, the dN/dS values were <0.11. Thus, our dN/dS analysis suggests that selective constraints have remained stable throughout the evolution of MYB-related genes in land plants.[12]
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−	~~You can also add sub-section(s) at will.~~

	==Labs working on this gene==		==Labs working on this gene==

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 Microarray data of 60 different tissues/developmental conditions of maize were used (Fig. 1). Few genes were constitutively expressed in all organs and developmental stages. CCA-like/R-R genes were expressed in most organs examined, with the exception of seeds. However, six genes in a CCA1-like/R-R subgroup clade (ZmMYBR02, ZmMYBR11, ZmMYBR34, ZmMYBR42, ZmMYBR65, and ZmMYBR67) showed higher expression in seeds than in other organs, which indicated that they may play important roles in seed development (Fig. 1). Similar to CCA1-like/R-R proteins, the I-box-like genes were also expressed abundantly in many maize organs. This may indicate that these two subgroups predominantly contribute to maize development. The expression of I-box-like genes and most of the CCA1-like/R-R genes significantly decreased during seed development, further implying roles as negative regulators in seed development. A CPC-like gene, ZmMYBR20, was highly expressed in leaf tissues, which suggested that it may function in leaf development, or it may be restricted by 2R-MYB genes in other developmental stages .
-[[File:dst02105.jpg|frame|thumb|50px|''Figure 1. Expression profiles of MYB-related genes in maize across different developmental stages and organs. '']]
+[[File:dst02105.jpg|frame|''Figure 1. Expression profiles of MYB-related genes in maize across different developmental stages and organs. '']]
 The TRF-like subgroup included only two maize genes, which showed relatively high expression in seeds. Although no TRF-like genes have yet been functionally characterized in plants, their preferential expression in maize seed tissues implies their possible roles in seed development. The TBP-like subgroup, consisting of five clades, contained 14 maize genes. Although members of this subgroup displayed relatively low expression in all examined organs, TBP-like genes have wider expression in maize . Furthermore, closely related genes generally showed highly similar expression patterns, indicating that they may share similar or overlapping functions.