Os03g0401300 - Revision history

Zhennan at 10:04, 25 June 2016

2016-06-25T10:04:41Z

Zhennan: /* Annotated Information */

2016-06-25T10:03:33Z

‎Annotated Information

Yangmei li: /* Annotated Information */

2014-05-14T06:15:04Z

‎Annotated Information

Yangmei li: /* Annotated Information */

2014-05-14T06:07:28Z

‎Annotated Information

Yangmei li: /* Function */

2014-05-14T06:06:09Z

‎Function

Yangmei li: /* Function */

2014-05-14T06:05:14Z

‎Function

124.16.129.48 at 19:36, 22 July 2012

2012-07-22T19:36:54Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os03g0401300| Description = Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2)| Version = NM_001056854.1 GI:115453436 GeneID:43..."

2012-06-24T12:42:38Z

Created page with "{{JaponicaGene| GeneName = Os03g0401300| Description = Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2)| Version = NM_001056854.1 GI:115453436 GeneID:43..."

New page

{{JaponicaGene|
GeneName = Os03g0401300|
Description = Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2)|
Version = NM_001056854.1 GI:115453436 GeneID:4333062|
Length = 4811 bp|
Definition = Oryza sativa Japonica Group Os03g0401300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
AP = Chromosome 3:16852236..16857046|
CDS = 16852660..16852846,16852941..16853185,16853284..16853602,16853689..16853913,16854018..16854184<br>,16854268..16854384,16854472..16854645,16854727..16854822,16854907..16855123<br>,16855243..16855361,16855487..16855679,16855800..16855951,16856047..16856176<br>,16856905..16857014|
GCID = <gbrowseImage1>
name=NC_008396:16852236..16857046
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008396:16852236..16857046
source=RiceChromosome03
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgggggaagctgccggcgaccgcgtcctgagccgcctccacagcgtcagggagcgcatcggcgactccctctccgcccaccccaatgagctcgtcgccgtcttcaccaggctggttaacctcggaaagggaatgcttcaggcccaccagatcattgctgagtacaacaacgcaatctctgaggctgatcgtgagaagctgaaggacggtgcttttgaggatgtcctgaggagtgcacaggaggggattgttatctccccatgggttgcccttgccatccgcccgaggcccggtgtctgggagtatgtgagggtcaatgtgagcgagctcgctgttgagttgctgacagtccccgagtacttgcagttcaaggaacagcttgtggaagaaggcaccaacaacaactttgtgcttgagctggatttcgagccattcaatgcctccttccctcgtccttctctgtcgaagtccattggcaatggtgtgcagttcctcaacaggcatctgtcatcgaagctcttccatgacaaggagagcatgtacccactgctcaacttccttcgtgcacacaactacaagggcatgaccatgatgttgaatgacagaatccgcagtctcagtgctctccaaggtgctctgaggaaggctgaggagcatctttctggtctttcagcagacaccccttactcagaattccaccacaggttccaggaacttggtctggagaagggttggggtgactgtgccaagcgttcccaggagaccattcacctccttttggaccttcttgaggcccctgatccgtccaccctcgagaagttccttggaacaatcccaatggtgttcaatgttgtcattatgtccccacacggttacttcgcgcaagccaatgtcttgggttaccctgacactggagggcaggttgtctacattttggaccaagtccgtgctatggagaatgagatgcttctgaggatcaagcagcaaggtctcaatattacaccacgcatccttattgtcaccaggttgctccctgatgcaactggcaccacctgcggtcagcgtcttgagaaggtccttggcaccgagcacacccacatcctacgtgtgcctttcagaactgaaaatggaattgttcgcaagtggatctcacgttttgaagtctggccgtacctggaaacattcactgatgatgtcgcgcacgaaattgctggagagctccaggccaatcctgacttgatcatcggaaactacagtgacggaaaccttgttgcatgcttgcttgcacacaagatgggtgttacccattgtaccattgcccatgcgcttgagaaaaccaagtaccccaactctgacctctactggaagaagtttgaggatcactaccacttctcatgccagttcacaactgacttgattgcgatgaaccacgctgacttcatcatcaccagtaccttccaagagattgccggaaacaaggacactgttggtcagtatgagtctcacatggcattcaccatgcctggtctgtaccgtgttgtccacggtattgatgtttttgacccgaagtttaacattgtctcgcctggtgcggacatgtccatctacttcccttactctgagtctcgtaagaggctcacctccctccacccagagattgaggagttgctctacagcgaagttgacaacaacgagcacaagtttatgctgaaggacaggaacaagccaatcatcttctccatggctcgtcttgaccgtgtcaagaacttgactggtctggttgagctgtatggtcgcaaccctcgcctgcaagagctggttaaccttgtggttgtctgtggtgaccatggcaacccatctaaggacaaggaggagcaggctgagttcaagaagatgtttgaccttattgagcaatacaacttgaatggccacatccgctggatctccgcgcagatgaaccgtgtccgcaacggtgagctctaccgttacatctgcgacaccaagggtgcttttgtgcagcccgctttctacgaggcattcggtctcactgttgttgagtccatgacctgtggtctcccgacattcgcaaccgcctatggtggtccagctgagatcatcgtgaacggagtgtctggcttccacattgacccataccagggtgacaaggcctcggcgctgctcgttgagttctttgagaagtgccaggaagaccccagccactggaccaagatctcgcagggcggtcttcagcgtatcgaggagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatgctgtatgccctcaagtaccgcaccatggctagcaccgtcccgttggccgtcgagggcgagccgtcgaacaagtga</cdnaseq>|
AA = <aaseq>MGEAAGDRVLSRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKG MLQAHQIIAEYNNAISEADREKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEY VRVNVSELAVELLTVPEYLQFKEQLVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGN GVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEE HLSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDPSTLEKFLG TIPMVFNVVIMSPHGYFAQANVLGYPDTGGQVVYILDQVRAMENEMLLRIKQQGLNIT PRILIVTRLLPDATGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYL ETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPN SDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMP GLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEH KFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHGNPSKDKE EQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGL TVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSH WTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKY RTMASTVPLAVEGEPSNK</aaseq>|
DNA = <dnaseqindica>4201..4387#3862..4106#3445..3763#3134..3358#2863..3029#2663..2779#2402..2575#2225..2320#1924..2140#1686..1804#1368..1560#1096..1247#871..1000#33..142#aggcttgaggagccaagaggaagaggagagcaatgggggaagctgccggcgaccgcgtcctgagccgcctccacagcgtcagggagcgcatcggcgactccctctccgcccaccccaatgagctcgtcgccgtcttcaccaggttcgtgctgatttagtgatttcccagcattagattttgttggtttctagtctactgccttcagatgttactgtattttcttttagaaggagatgttcatataggatctttgttgttgagattgttagatctggccaggaatggctcatatttactgaattggatgcaatcattttgtagtcactttttttttaagtttctgattagaatgaatatttaagtgcggccttctgcagccaagattttgtacaaacctagtactactgaataatgatgaaatatacaaatgtagttttggattactgtggactggtagtgctagatctgactgcatgtgcatgttatttatattatatatacggtttacaaactgaatacaagtaatgaattctgcactggtacagatgcttgttgtggtagcaaagtttcacaaaaaaaataaaaaacctacatcttactagatctattggcgcgagcgcgtagatctgattatcgcgcatatttcattaagtccaattaaatggtcaaaactaatcatttcatatctacaatgaaatttttaattcatctcaatgcaaacagatcatatatggtctttttaagtggctaatagcaaattttcttattatgcgcaaatgctcaagtgctaaaattatcttattgagatatttataggctgagttgatagatctggcctgatatttttgttgacactgttatttgcgcaggctggttaacctcggaaagggaatgcttcaggcccaccagatcattgctgagtacaacaacgcaatctctgaggctgatcgtgagaagctgaaggacggtgcttttgaggatgtcctgaggagtgcacaggtttgaatcagattcagatttcattgcatcacagagatccatctttactctaccgcttgctctaacttaacttgtaattgttttttatcatgcaggaggggattgttatctccccatgggttgcccttgccatccgcccgaggcccggtgtctgggagtatgtgagggtcaatgtgagcgagctcgctgttgagttgctgacagtccccgagtacttgcagttcaaggaacagcttgtggaagaagggtatgaaatctgcataattgggatactaaaaacatatattcttaaaatttaaaacttaattttattatttttcttttatcgatatatatgtcattgtaatatctctgatgtatatttcagcaccaacaacaactttgtgcttgagctggatttcgagccattcaatgcctccttccctcgtccttctctgtcgaagtccattggcaatggtgtgcagttcctcaacaggcatctgtcatcgaagctcttccatgacaaggagagcatgtacccactgctcaacttccttcgtgcacacaactacaagggcatggtaaggcagcttcatactatttcctcatctcacatttttgtactatggcatattaacatgaattgaattgattttgagatggaagtataaattctgaatggatggaatatatattttttctgcagaccatgatgttgaatgacagaatccgcagtctcagtgctctccaaggtgctctgaggaaggctgaggagcatctttctggtctttcagcagacaccccttactcagaattccaccacaggtactgataattattttttacatattatgaactctagaatgtattttgatatgaaaccaccgaagatattttgccagtattgttgtgactaaaaatgaccatttgattggaaaatacaggttccaggaacttggtctggagaagggttggggtgactgtgccaagcgttcccaggagaccattcacctccttttggaccttcttgaggcccctgatccgtccaccctcgagaagttccttggaacaatcccaatggtgttcaatgttgtcattatgtccccacacggttacttcgcgcaagccaatgtcttgggttaccctgacactggagggcaggtagaattcttaattttgacatttgttcatacttaaaaaaattaaacctgttctcattattctttgtgctatgattaccgaaaggttgtctacattttggaccaagtccgtgctatggagaatgagatgcttctgaggatcaagcagcaaggtctcaatattacaccacgcatccttattgtaagtgggatacctgatatggtgcaatacaacttgtcagctatagcaatatgatatttaaccttctttggtcttgaacaggtcaccaggttgctccctgatgcaactggcaccacctgcggtcagcgtcttgagaaggtccttggcaccgagcacacccacatcctacgtgtgcctttcagaactgaaaatggaattgttcgcaagtggatctcacgttttgaagtctggccgtacctggaaacattcactgatgtagatacctaacctcgctgtcacaccttcttggttattcatttattaaagataaacttcatattgactctttcccatggatgtcaggatgtcgcgcacgaaattgctggagagctccaggccaatcctgacttgatcatcggaaactacagtgacggaaaccttgttgcatgcttgcttgcacacaagatgggtgttacccatgtacgcattttgactactctgatcagaagtgttttaactacatatttgctcattctcatgttgccttgttccatgatatgcagtgtaccattgcccatgcgcttgagaaaaccaagtaccccaactctgacctctactggaagaagtttgaggatcactaccacttctcatgccagttcacaactgacttgattgcgatgaaccacgctgacttcatcatcaccagtaccttccaagagattgccggaaagtaatatttctatacaactaaagttttctgggtcacatccgtcagttatgtcgtaaaaatgcaattacctttccatgatctaatggcattttctggtttttcagcaaggacactgttggtcagtatgagtctcacatggcattcaccatgcctggtctgtaccgtgttgtccacggtattgatgtttttgacccgaagtttaacattgtctcgcctggtgcggacatgtccatctacttcccttactctgagtctcgtaagaggctcacctccctccacccagagattgaggagttgctctacagcgaagttgacaacaacgagcacaagtaagaagcggtttttacatagctcgatctacattcatctgatgcatgtcgccctcattatctgactagaatactctctgcaacaggtttatgctgaaggacaggaacaagccaatcatcttctccatggctcgtcttgaccgtgtcaagaacttgactggtctggttgagctgtatggtcgcaaccctcgcctgcaagagctggttaaccttgtggttgtctgtggtgaccatggcaacccatctaaggacaaggaggagcaggctgagttcaagaagatgtttgaccttattgagcaatacaacttgaatggccacatccgctggatctccgcgcagatgaaccgtgtccgcaacggtgagctctaccgttacatctgcgacaccaagggtgcttttgtgcaggtaacttaatgatgttctctcattgcaaaaatatcatggttgaatacttgaattgtaaatctaactgttctcaaatttatcttgtcttgcgtttccagcccgctttctacgaggcattcggtctcactgttgttgagtccatgacctgtggtctcccgacattcgcaaccgcctatggtggtccagctgagatcatcgtgaacggagtgtctggcttccacattgacccataccagggtgacaaggcctcggcgctgctcgttgagttctttgagaagtgccaggaagaccccagccactggaccaagatctcgcagggcggtcttcagcgtatcgaggagaagtatgcaaaacacatcccagtaatctgtgtttctgaatacgcatttcgtctttcttgcagtgctaacattatgtttctccaacctttgtttcagatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatgctgtatgccctcaagtaccgcaccatggctagcaccgtcccgttggccgtcgagggcgagccgtcgaacaagtgagctggccaacatctcaggctgagactctgaaagaggagagcattggagtttctttgctttgtttccattctctggtttcagagatgaaaagagaagagagatatttcaggatgctttgcattcctaggcactgctctttttccttaagaaagtaaggtcgattgaatttgggagttttctagtttgatttagttgggggtgagttcagtggaatgtggtgtgtggttggtgctctgtctcctcttgttattgggatgttacctatgaataatagaaacggccttggtgccgtttctgcaataatatattgtagcatccttgtttccaagaaaaaattgtcactgaaatgctcacttctccttggggttatcttactgtttatttatgtttcaccaatcgaaatccttactgtgcatctttgact</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056854.1 RefSeq:Os03g0401300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 3]]
[[Category:Chromosome 3]]

@@ Line 13: / Line 13: @@
 You can also add sub-section(s) at will.
 ==Structured Information==
@@ Line 58: / Line 52: @@
 [[Category:Japonica Chromosome 3]]
 [[Category:Chromosome 3]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-Sus 2
 ===Function===
 In rice three genes encoding for sucrose synthase (Sus) (EC 2.4.1.13) have previously been characterized, and a further three sequences for putative Sus genes reported. The current work confirms that these six genes comprise the entire rice Sus gene family. An expression analysis was conducted in various rice tissues using real-time quantitative RT-PCR. Sus transcripts were detected in a wide range of tissues and at different developmental stages, indicating that Sus is involved in numerous and diverse growth processes in the rice plant. SUS1 was predominantly expressed in elongating tissues including roots, developing leaves and internodes; a potential role for SUS1 in cellulose synthesis is discussed. SUS2 was shown to be expressed in a wide range of tissues, suggesting that it may perform a number of housekeeping role(s). In addition, overall Sus activity and expression of SUS2 increased significantly in seedlings germinated and grown in hypoxia (submerged conditions), suggesting a role in increasing sucrose metabolism as a response to environmental stress. SUS3 and SUS4 were predominantly expressed in the caryopsis, indicating potential roles in carbon allocation within the filling grain. Transcript levels of SUS5 and SUS6 were low in all tissues examined, and were suppressed in germinating shoots under submergence.

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:Example.jpg]]
+Sus 2
 ===Function===
 In rice three genes encoding for sucrose synthase (Sus) (EC 2.4.1.13) have previously been characterized, and a further three sequences for putative Sus genes reported. The current work confirms that these six genes comprise the entire rice Sus gene family. An expression analysis was conducted in various rice tissues using real-time quantitative RT-PCR. Sus transcripts were detected in a wide range of tissues and at different developmental stages, indicating that Sus is involved in numerous and diverse growth processes in the rice plant. SUS1 was predominantly expressed in elongating tissues including roots, developing leaves and internodes; a potential role for SUS1 in cellulose synthesis is discussed. SUS2 was shown to be expressed in a wide range of tissues, suggesting that it may perform a number of housekeeping role(s). In addition, overall Sus activity and expression of SUS2 increased significantly in seedlings germinated and grown in hypoxia (submerged conditions), suggesting a role in increasing sucrose metabolism as a response to environmental stress. SUS3 and SUS4 were predominantly expressed in the caryopsis, indicating potential roles in carbon allocation within the filling grain. Transcript levels of SUS5 and SUS6 were low in all tissues examined, and were suppressed in germinating shoots under submergence.

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:Example.jpg]]===Function===
+[[File:Example.jpg]]
 Please input function information here.
 In rice three genes encoding for sucrose synthase (Sus) (EC 2.4.1.13) have previously been characterized, and a further three sequences for putative Sus genes reported. The current work confirms that these six genes comprise the entire rice Sus gene family. An expression analysis was conducted in various rice tissues using real-time quantitative RT-PCR. Sus transcripts were detected in a wide range of tissues and at different developmental stages, indicating that Sus is involved in numerous and diverse growth processes in the rice plant. SUS1 was predominantly expressed in elongating tissues including roots, developing leaves and internodes; a potential role for SUS1 in cellulose synthesis is discussed. SUS2 was shown to be expressed in a wide range of tissues, suggesting that it may perform a number of housekeeping role(s). In addition, overall Sus activity and expression of SUS2 increased significantly in seedlings germinated and grown in hypoxia (submerged conditions), suggesting a role in increasing sucrose metabolism as a response to environmental stress. SUS3 and SUS4 were predominantly expressed in the caryopsis, indicating potential roles in carbon allocation within the filling grain. Transcript levels of SUS5 and SUS6 were low in all tissues examined, and were suppressed in germinating shoots under submergence.

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-===Function===
+[[File:Example.jpg]]===Function===
 Please input function information here.
 In rice three genes encoding for sucrose synthase (Sus) (EC 2.4.1.13) have previously been characterized, and a further three sequences for putative Sus genes reported. The current work confirms that these six genes comprise the entire rice Sus gene family. An expression analysis was conducted in various rice tissues using real-time quantitative RT-PCR. Sus transcripts were detected in a wide range of tissues and at different developmental stages, indicating that Sus is involved in numerous and diverse growth processes in the rice plant. SUS1 was predominantly expressed in elongating tissues including roots, developing leaves and internodes; a potential role for SUS1 in cellulose synthesis is discussed. SUS2 was shown to be expressed in a wide range of tissues, suggesting that it may perform a number of housekeeping role(s). In addition, overall Sus activity and expression of SUS2 increased significantly in seedlings germinated and grown in hypoxia (submerged conditions), suggesting a role in increasing sucrose metabolism as a response to environmental stress. SUS3 and SUS4 were predominantly expressed in the caryopsis, indicating potential roles in carbon allocation within the filling grain. Transcript levels of SUS5 and SUS6 were low in all tissues examined, and were suppressed in germinating shoots under submergence.

← Older revision		Revision as of 19:36, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os03g0401300\|		GeneName = Os03g0401300\|