Os04g0101400 - Revision history

Xysj1985: /* Annotated Information */

2016-10-17T06:54:41Z

‎Annotated Information

Xysj1985 at 06:53, 17 October 2016

2016-10-17T06:53:51Z

Xysj1985 at 06:52, 17 October 2016

2016-10-17T06:52:23Z

192.168.72.52 at 07:44, 14 May 2015

2015-05-14T07:44:51Z

124.16.129.48 at 19:47, 22 July 2012

2012-07-22T19:47:26Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os04g0101400| Description = Cytochrome P450 family protein| Version = NM_001058526.1 GI:115456781 GeneID:4334886| Length = 1834 bp| Definition ..."

2012-06-24T10:55:41Z

Created page with "{{JaponicaGene| GeneName = Os04g0101400| Description = Cytochrome P450 family protein| Version = NM_001058526.1 GI:115456781 GeneID:4334886| Length = 1834 bp| Definition ..."

New page

{{JaponicaGene|
GeneName = Os04g0101400|
Description = Cytochrome P450 family protein|
Version = NM_001058526.1 GI:115456781 GeneID:4334886|
Length = 1834 bp|
Definition = Oryza sativa Japonica Group Os04g0101400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
AP = Chromosome 4:90335..92168|
CDS = 90512..91141,91240..92160|
GCID = <gbrowseImage1>
name=NC_008397:90335..92168
source=RiceChromosome04
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008397:90335..92168
source=RiceChromosome04
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcatcgttgatggaagtgcaggtgccgctgttgggaatgggcactacgatgggcgccctggctctggctctcgtcgtcgttgtggttgtgcacgttgccgtgaacgcctttgggcggcggcggcttcccccgagtccggcgagcctaccggtgatcgggcaccttcacctgctccggccgccggtgcaccgcaccttccacgagctggcggcgaggctgggccccctgatgcacgtccggctggggtcgacgcactgcgttgtggcgagctcggcggaggtggcggcggagctgatccgcagccacgaggcgaagatatcggagcggccgctgacggcggtggcccggcagttcgcgtacgagtcggcggggttcgcgttcgcgccctacagcccgcactggcgcttcatgaagcggctgtgcatgtcggagctgctgggcccgcgcacggtggagcagctgcgccccgtgcgccgagccgggctggtgtcgctgctgcgccacgtgttgtcgcagccggaggcggaggcggtggacctgacccgcgagctcatccgcatgtccaacacctccatcatccgcatggccgccagcacggtccccagcagcgtgacggaggaggcgcaggagctggtgaaggtggtggcggagctggtgggcgccttcaacgccgacgactacatcgccctgtgccgtggctgggacctgcagggcctcgggcgccgtgcggccgacgtgcacaagaggttcgacgcgctgctggaggagatgatcaggcacaaggaggaggctaggatgcggaagaagacagacacagacgtcggcagcaaggacctgcttgacatcctgctggacaaggcggaggacggcgcggcggaggtgaagctcaccagagacaacatcaaggccttcatcatcgacgttgttactgccgggtccgacacttcggccgccatggtggagtggatggtggcggagctgatgaaccacccggaggccctgcgcaaggtgcgggaggagatcgaggcggtggtggggcgggacaggatcgccggcgagggggacctgccgagactgccgtatctgcaggcggcgtacaaggagacgctgcggttgaggccggcggcgccgatcgcgcacaggcagtcgacggaggagatccagatccgagggttcagggtgccggcgcagacggcggtgttcatcaacgtgtgggccatcgggcgagacccggcgtactgggaggagccgctggagttcaggccggagcggttcctcgccggcggcggcggcgagggcgtggagccgcgcgggcagcacttccagttcatgccgttcgggagcggccggcgcgggtgccccgggatggggcttgcgctgcagtcggtgccggcggtggtggcggcgctgctgcagtgcttcgattggcagtgcatggacaataagttgatagacatggaggaggcagacggcctggtttgcgctcggaagcatcgcctcctcctccacgcccacccgcgcctccaccctttcccgccgctcctctag</cdnaseq>|
AA = <aaseq>MASLMEVQVPLLGMGTTMGALALALVVVVVVHVAVNAFGRRRLP PSPASLPVIGHLHLLRPPVHRTFHELAARLGPLMHVRLGSTHCVVASSAEVAAELIRS HEAKISERPLTAVARQFAYESAGFAFAPYSPHWRFMKRLCMSELLGPRTVEQLRPVRR AGLVSLLRHVLSQPEAEAVDLTRELIRMSNTSIIRMAASTVPSSVTEEAQELVKVVAE LVGAFNADDYIALCRGWDLQGLGRRAADVHKRFDALLEEMIRHKEEARMRKKTDTDVG SKDLLDILLDKAEDGAAEVKLTRDNIKAFIIDVVTAGSDTSAAMVEWMVAELMNHPEA LRKVREEIEAVVGRDRIAGEGDLPRLPYLQAAYKETLRLRPAAPIAHRQSTEEIQIRG FRVPAQTAVFINVWAIGRDPAYWEEPLEFRPERFLAGGGGEGVEPRGQHFQFMPFGSG RRGCPGMGLALQSVPAVVAALLQCFDWQCMDNKLIDMEEADGLVCARKHRLLLHAHPR LHPFPPLL</aaseq>|
DNA = <dnaseqindica>1028..1657#9..929#aaggtaggatggcatcgttgatggaagtgcaggtgccgctgttgggaatgggcactacgatgggcgccctggctctggctctcgtcgtcgttgtggttgtgcacgttgccgtgaacgcctttgggcggcggcggcttcccccgagtccggcgagcctaccggtgatcgggcaccttcacctgctccggccgccggtgcaccgcaccttccacgagctggcggcgaggctgggccccctgatgcacgtccggctggggtcgacgcactgcgttgtggcgagctcggcggaggtggcggcggagctgatccgcagccacgaggcgaagatatcggagcggccgctgacggcggtggcccggcagttcgcgtacgagtcggcggggttcgcgttcgcgccctacagcccgcactggcgcttcatgaagcggctgtgcatgtcggagctgctgggcccgcgcacggtggagcagctgcgccccgtgcgccgagccgggctggtgtcgctgctgcgccacgtgttgtcgcagccggaggcggaggcggtggacctgacccgcgagctcatccgcatgtccaacacctccatcatccgcatggccgccagcacggtccccagcagcgtgacggaggaggcgcaggagctggtgaaggtggtggcggagctggtgggcgccttcaacgccgacgactacatcgccctgtgccgtggctgggacctgcagggcctcgggcgccgtgcggccgacgtgcacaagaggttcgacgcgctgctggaggagatgatcaggcacaaggaggaggctaggatgcggaagaagacagacacagacgtcggcagcaaggacctgcttgacatcctgctggacaaggcggaggacggcgcggcggaggtgaagctcaccagagacaacatcaaggccttcatcatcgtaagccagcacgcacttttttctttctttctttcttaattagctagtggagtggagtactaagatgatgcatggatatgatgcactcgatcgatcaggacgttgttactgccgggtccgacacttcggccgccatggtggagtggatggtggcggagctgatgaaccacccggaggccctgcgcaaggtgcgggaggagatcgaggcggtggtggggcgggacaggatcgccggcgagggggacctgccgagactgccgtatctgcaggcggcgtacaaggagacgctgcggttgaggccggcggcgccgatcgcgcacaggcagtcgacggaggagatccagatccgagggttcagggtgccggcgcagacggcggtgttcatcaacgtgtgggccatcgggcgagacccggcgtactgggaggagccgctggagttcaggccggagcggttcctcgccggcggcggcggcgagggcgtggagccgcgcgggcagcacttccagttcatgccgttcgggagcggccggcgcgggtgccccgggatggggcttgcgctgcagtcggtgccggcggtggtggcggcgctgctgcagtgcttcgattggcagtgcatggacaataagttgatagacatggaggaggcagacggcctggtttgcgctcggaagcatcgcctcctcctccacgcccacccgcgcctccaccctttcccgccgctcctctagctacccctacctacctaccactcctactcctttcctgtccctgtaacgcaccgtaatacaaccattataaattaattaccactttactatattgtaataattaatgtgtatgtattccctacctagacctattgcatgtctctcaaatcaaatattccaagcaagcttgattgtgat</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058526.1 RefSeq:Os04g0101400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 4]]
[[Category:Chromosome 4]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:98-Os04g0101400.png|right|thumb|427px|'''Figure 4.''' ''HPLC-MS/MS metabolite analysis of Arabidopsis tt6 plants overexpressing CYP93G1.<ref name="ref1" />.'']]
+[[File:98-Os04g0101400.png|right|thumb|327px|'''Figure 4.''' ''HPLC-MS/MS metabolite analysis of Arabidopsis tt6 plants overexpressing CYP93G1.<ref name="ref1" />.'']]
 ===Gene Symbol===
 *'''''Os04g0101400''''' '''''<=>''''' '''''CYP93G1,OsFNSII,FNSII,OsCYP93G1'''''

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:Os04g0101400.png|right|thumb|427px|'''Figure 4.''' ''HPLC-MS/MS metabolite analysis of Arabidopsis tt6 plants overexpressing CYP93G1.<ref name="ref1" />.'']]
+[[File:98-Os04g0101400.png|right|thumb|427px|'''Figure 4.''' ''HPLC-MS/MS metabolite analysis of Arabidopsis tt6 plants overexpressing CYP93G1.<ref name="ref1" />.'']]
 ===Gene Symbol===
 *'''''Os04g0101400''''' '''''<=>''''' '''''CYP93G1,OsFNSII,FNSII,OsCYP93G1'''''

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os04g0101400''''' was reported as '''''CYP93G1''''' in 2014 <ref name="ref1" /> by researchers from China.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* '''''CYP93G1''''' is a bona fide flavone synthase II (FNSII) that catalyzes the direct conversion of flavanones to flavones.
-===Expression===
+===Phenotypic analysis===
-Please input expression information here.
+* To understand its metabolic roles in planta, the coding sequence of CYP93G1 was placed under the control of the cauliflower mosaic virus 35S promoter and transformed into the Arabidopsis transparent testa6 (tt6) mutant.
+* Transgenic seeds were germinated on medium devoid of nitrogen sources. Under such conditions, the endogenous flavonoid pathway in Arabidopsis is highly active in providing potential substrates for the engineered enzyme.
-===Evolution===
+* Ten-day-old T1 seedlings were harvested for methanol extraction, followed by acid hydrolysis, which releases flavonoid aglycones from O-linked conjugates. HPLC-MS/MS analysis detected the presence of apigenin, lu- teolin, and chrysoeriol in all of the CYP93G1 transgenic plant samples (Fig. 4A).
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

← Older revision		Revision as of 07:44, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
−	~~GeneName = Os04g0101400\|~~
−	~~Description = Cytochrome P450 family protein\|~~
−	~~Version = NM_001058526.1 GI:115456781 GeneID:4334886\|~~
−	~~Length = 1834 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os04g0101400, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 4\|Chromosome 4]]\|~~
−	~~AP = Chromosome 4:90335..92168\|~~
−	~~CDS = 90512..91141,91240..92160\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008397:90335..92168~~
−	~~source=RiceChromosome04~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008397:90335..92168~~
−	~~source=RiceChromosome04~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcatcgttgatggaagtgcaggtgccgctgttgggaatgggcactacgatgggcgccctggctctggctctcgtcgtcgttgtggttgtgcacgttgccgtgaacgcctttgggcggcggcggcttcccccgagtccggcgagcctaccggtgatcgggcaccttcacctgctccggccgccggtgcaccgcaccttccacgagctggcggcgaggctgggccccctgatgcacgtccggctggggtcgacgcactgcgttgtggcgagctcggcggaggtggcggcggagctgatccgcagccacgaggcgaagatatcggagcggccgctgacggcggtggcccggcagttcgcgtacgagtcggcggggttcgcgttcgcgccctacagcccgcactggcgcttcatgaagcggctgtgcatgtcggagctgctgggcccgcgcacggtggagcagctgcgccccgtgcgccgagccgggctggtgtcgctgctgcgccacgtgttgtcgcagccggaggcggaggcggtggacctgacccgcgagctcatccgcatgtccaacacctccatcatccgcatggccgccagcacggtccccagcagcgtgacggaggaggcgcaggagctggtgaaggtggtggcggagctggtgggcgccttcaacgccgacgactacatcgccctgtgccgtggctgggacctgcagggcctcgggcgccgtgcggccgacgtgcacaagaggttcgacgcgctgctggaggagatgatcaggcacaaggaggaggctaggatgcggaagaagacagacacagacgtcggcagcaaggacctgcttgacatcctgctggacaaggcggaggacggcgcggcggaggtgaagctcaccagagacaacatcaaggccttcatcatcgacgttgttactgccgggtccgacacttcggccgccatggtggagtggatggtggcggagctgatgaaccacccggaggccctgcgcaaggtgcgggaggagatcgaggcggtggtggggcgggacaggatcgccggcgagggggacctgccgagactgccgtatctgcaggcggcgtacaaggagacgctgcggttgaggccggcggcgccgatcgcgcacaggcagtcgacggaggagatccagatccgagggttcagggtgccggcgcagacggcggtgttcatcaacgtgtgggccatcgggcgagacccggcgtactgggaggagccgctggagttcaggccggagcggttcctcgccggcggcggcggcgagggcgtggagccgcgcgggcagcacttccagttcatgccgttcgggagcggccggcgcgggtgccccgggatggggcttgcgctgcagtcggtgccggcggtggtggcggcgctgctgcagtgcttcgattggcagtgcatggacaataagttgatagacatggaggaggcagacggcctggtttgcgctcggaagcatcgcctcctcctccacgcccacccgcgcctccaccctttcccgccgctcctctag</cdnaseq>\|
−	AA = <aaseq>MASLMEVQVPLLGMGTTMGALALALVVVVVVHVAVNAFGRRRLP PSPASLPVIGHLHLLRPPVHRTFHELAARLGPLMHVRLGSTHCVVASSAEVAAELIRS HEAKISERPLTAVARQFAYESAGFAFAPYSPHWRFMKRLCMSELLGPRTVEQLRPVRR AGLVSLLRHVLSQPEAEAVDLTRELIRMSNTSIIRMAASTVPSSVTEEAQELVKVVAE LVGAFNADDYIALCRGWDLQGLGRRAADVHKRFDALLEEMIRHKEEARMRKKTDTDVG SKDLLDILLDKAEDGAAEVKLTRDNIKAFIIDVVTAGSDTSAAMVEWMVAELMNHPEA LRKVREEIEAVVGRDRIAGEGDLPRLPYLQAAYKETLRLRPAAPIAHRQSTEEIQIRG FRVPAQTAVFINVWAIGRDPAYWEEPLEFRPERFLAGGGGEGVEPRGQHFQFMPFGSG RRGCPGMGLALQSVPAVVAALLQCFDWQCMDNKLIDMEEADGLVCARKHRLLLHAHPR LHPFPPLL</aaseq>\|
−	DNA = <dnaseqindica>1028..1657#9..929#aaggtaggatggcatcgttgatggaagtgcaggtgccgctgttgggaatgggcactacgatgggcgccctggctctggctctcgtcgtcgttgtggttgtgcacgttgccgtgaacgcctttgggcggcggcggcttcccccgagtccggcgagcctaccggtgatcgggcaccttcacctgctccggccgccggtgcaccgcaccttccacgagctggcggcgaggctgggccccctgatgcacgtccggctggggtcgacgcactgcgttgtggcgagctcggcggaggtggcggcggagctgatccgcagccacgaggcgaagatatcggagcggccgctgacggcggtggcccggcagttcgcgtacgagtcggcggggttcgcgttcgcgccctacagcccgcactggcgcttcatgaagcggctgtgcatgtcggagctgctgggcccgcgcacggtggagcagctgcgccccgtgcgccgagccgggctggtgtcgctgctgcgccacgtgttgtcgcagccggaggcggaggcggtggacctgacccgcgagctcatccgcatgtccaacacctccatcatccgcatggccgccagcacggtccccagcagcgtgacggaggaggcgcaggagctggtgaaggtggtggcggagctggtgggcgccttcaacgccgacgactacatcgccctgtgccgtggctgggacctgcagggcctcgggcgccgtgcggccgacgtgcacaagaggttcgacgcgctgctggaggagatgatcaggcacaaggaggaggctaggatgcggaagaagacagacacagacgtcggcagcaaggacctgcttgacatcctgctggacaaggcggaggacggcgcggcggaggtgaagctcaccagagacaacatcaaggccttcatcatcgtaagccagcacgcacttttttctttctttctttcttaattagctagtggagtggagtactaagatgatgcatggatatgatgcactcgatcgatcaggacgttgttactgccgggtccgacacttcggccgccatggtggagtggatggtggcggagctgatgaaccacccggaggccctgcgcaaggtgcgggaggagatcgaggcggtggtggggcgggacaggatcgccggcgagggggacctgccgagactgccgtatctgcaggcggcgtacaaggagacgctgcggttgaggccggcggcgccgatcgcgcacaggcagtcgacggaggagatccagatccgagggttcagggtgccggcgcagacggcggtgttcatcaacgtgtgggccatcgggcgagacccggcgtactgggaggagccgctggagttcaggccggagcggttcctcgccggcggcggcggcgagggcgtggagccgcgcgggcagcacttccagttcatgccgttcgggagcggccggcgcgggtgccccgggatggggcttgcgctgcagtcggtgccggcggtggtggcggcgctgctgcagtgcttcgattggcagtgcatggacaataagttgatagacatggaggaggcagacggcctggtttgcgctcggaagcatcgcctcctcctccacgcccacccgcgcctccaccctttcccgccgctcctctagctacccctacctacctaccactcctactcctttcctgtccctgtaacgcaccgtaatacaaccattataaattaattaccactttactatattgtaataattaatgtgtatgtattccctacctagacctattgcatgtctctcaaatcaaatattccaagcaagcttgattgtgat</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058526.1 RefSeq:Os04g0101400]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 4]]~~
−	~~[[Category:~~Chromosome 4]]

← Older revision		Revision as of 19:47, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os04g0101400\|		GeneName = Os04g0101400\|