Os04g0557500 - Revision history

Liman at 16:09, 20 December 2016

2016-12-20T16:09:27Z

Liman at 16:09, 20 December 2016

2016-12-20T16:09:01Z

Liman at 15:56, 20 December 2016

2016-12-20T15:56:01Z

Liman at 09:05, 10 December 2016

2016-12-10T09:05:00Z

192.168.72.52 at 08:02, 14 May 2015

2015-05-14T08:02:06Z

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124.16.129.48 at 19:57, 22 July 2012

2012-07-22T19:57:22Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os04g0557500| Description = Similar to Transcriptional activator Ra homolog (Fragment)| Version = NM_001060066.1 GI:115459861 GeneID:4336635| Le..."

2012-06-24T11:22:15Z

Created page with "{{JaponicaGene| GeneName = Os04g0557500| Description = Similar to Transcriptional activator Ra homolog (Fragment)| Version = NM_001060066.1 GI:115459861 GeneID:4336635| Le..."

New page

{{JaponicaGene|
GeneName = Os04g0557500|
Description = Similar to Transcriptional activator Ra homolog (Fragment)|
Version = NM_001060066.1 GI:115459861 GeneID:4336635|
Length = 23760 bp|
Definition = Oryza sativa Japonica Group Os04g0557500, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
AP = Chromosome 4:28314104..28337863|
CDS = 28314484..28314621,28314699..28315355,28329743..28329799,28329913..28329927,28330162..28330242<br>|
GCID = <gbrowseImage1>
name=NC_008397:28314104..28337863
source=RiceChromosome04
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008397:28314104..28337863
source=RiceChromosome04
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgcaagcaatcgatctgtttggttgtgcaatgctcagtctgcagatagcaaaacactttctacgtgcgctcttagcgaagagcgcgtctattcagacaattgtctgcatccccttcatgagtggcgtgcttgagctgggaaccactgatccggtttcggaggacccaaacttggtaaaccgaatcgttgcatatttgaaggagcttcagtttccgatatgcttagaggtaccgagttctactccttctccagacgaaacagaagatgccgacaccgtgttcgatggcctcattgaagaggaccagatggtcatactccagggagaagacgagctaggcgacgtcgtcgtcgctgagtgcgagaccaacggcgccaaccccgaaacgatcaccatggagaccgacgagttctacagcctctgcgaggagctggacctggacctcggttcttatcagctagtcccgacgtcggcacgggagacggtggctgcggcggcggcggcggctaacgatgtcgacggcgttgcatactctcacgcctcgtgtttcgtgtcatggaaaagagcgaacccggcggagaaggtggtggccgtgccgatgactgcaggcatagagtcacagaagttgctgaagaaagctgtaggcggcggcaccgcatggatgagtaatattgatgatcgtggtagcgtggcaataacgacgactccaggaagtaacatcaagagccatgtcatgtcagagagaaggcgccgagagaagctcaacgagatgttcctcattctgaagtcactactcccctccgtccgcaaggttgacaaggcatccatacttgcagaaacgataacctacctcaaagtgttagagaaaagagtgaaagagctggagtccagcagcagggagccatcgcgttggcggccaaccgaaattggacaggggaaggcgccgtaa</cdnaseq>|
AA = <aaseq>MQAIDLFGCAMLSLQIAKHFLRALLAKSASIQTIVCIPFMSGVL ELGTTDPVSEDPNLVNRIVAYLKELQFPICLEVPSSTPSPDETEDADTVFDGLIEEDQ MVILQGEDELGDVVVAECETNGANPETITMETDEFYSLCEELDLDLGSYQLVPTSARE TVAAAAAAANDVDGVAYSHASCFVSWKRANPAEKVVAVPMTAGIESQKLLKKAVGGGT AWMSNIDDRGSVAITTTPGSNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASI LAETITYLKVLEKRVKELESSSREPSRWRPTEIGQGKAP</aaseq>|
DNA = <dnaseqindica>23243..23380#22509..23165#8065..8121#7937..7951#7622..7702#gaaattaaacagttaagttctagatttctatcgtggtgatggcatctgctcctccagttcaggaagaagccctacagccagggacgaaccacttcaggagccggcttgctgctgctgtgaggagcatcagttggagttacaccatcttttggtccacttcaaccagtctcccggggtaataacaatataattagttcatttttttagactatgaattactctagttcattattatgaatgcagttgcataggtcatcattagtttccacttgtgccaacccggccgccattcccaaggctcgtcttcttctcattcccgagccgacgttgggctcccagtgccttctccggtatcgggtccttctccacgtgcgctcggtggtctgcctctcggccccctcggcgtctggcgatgtcgacccggccggtggcggtggtgctagcggtgagggtggtggcgctgcgaacgatggtggtggcgacctcggcgctcgtttttcgcgaggtttggacgggggtagtcggcacgatggcagccggcgcgacggtgctccgcagcggcgctcgtcgggcgttctcggtggtgtgcgccttgcggaggtcgccggcgcggaggcgcgctccccggcgttggcggcgtgcccggcggggtctgccgacgcggcggtgcggttcccagtgctgccagcgtgtccagctgtggggcccaccattcaaacggcttcacctgacttggtgccccccctggcgtctgcggctgtggccatctctccttttgaggccgtttctccttttgaccactctctttttgcttcttcttttgtctcctctcgcgatgctcgggcgttggatcccatgttgattcccccatcgctttccacgtcgctcgctggctctttggacgcggtgatggcaggcgcagagagcgcggcgggtgcggagagcgcggctccccctccgcacgtggcagcggtggctctctctccgcgcgcggcctcgccagctgggctgctcagtcccggcctagtctcttcttcgccagctgggccgctgggtgggccgtcccctccccttaggctggtggactcagctgggccgacgtgtgacttggaggagtcgccacctcttgtgccgcttgggtcgccgcctgcgctggcccatgcagcccatgcggccacctcattttctccgttggccgacgacgggcggggcttgctgctggcgttgccggacgccacgggttcgccagctgctgcagacgccgtcacggcctctccggtcgacgtcgtcccgccggtcgacgcgggctcgccagctgccgatgtggccaccacgtgctctccggcagccgctggcatgccggccgccgccgtggccgctgctggctcgacggctcctgctgtggtcgccccggactcgccagttgctgccgtggctgtcttcagctcgccaactgcagtggctgcctccagctcgccagctgcttcgccggttgacatcgtggccgcctcttcttcgccggctgccgccgtggccgccttcggctcgccggctgtcgtggttgcctccaactcactggttgcgggttcactggccgccgtcgtctctccggtttgcgccacttcgccggttgctgcctgctacccgccgaccgcatcttccttgctgtctggcccttcgggtggcggcccggcgttccctgcctcgccactgtgctcgcgacgttcgccgttgttggccgatgggatcgcggcctcctacgccgagccgactggtctcttcttcgacgagctcgacgccctggccgcggagtttggtccggctgtgccttcgccgcccagggtatcgcctgtgccgccgtccgcctccggtgcaggcacttctctgccgaggactacctgcacaccgcctactggtggggagtggctgaggcctgagtcgccgcttcctcagcaggctccaactttggtagttgatgtgcccgacggcgtcctctacgatgtgccgatggttgtccttgacctcgatggccgcccactggcgcactcgcttccatcttctgtagcagacaacgccgctcttcgcgccttcctcaccagctgctccaggcctctccctcctgtgctcctatcgccgcctttgctgctgcagcctctcgccgccaaggcggtggaggttgtgccgaagcgcggtgagcgtatcgctgctaagatggcacttgaggcgcttgaggggccgatccacgcagtgtcgcgcgcccagcgcaacctgatgcggaagctcggcctagttccggagaggggcccggtcacggccgaggcggttgcggcttacaacgccctcttctccaagccactttcccaggagcacatcatcgcgctctcctcgctcttctccagctccttgcccccggccaaggctgcggaggagttggtcgtgtgcggctgatcggtttcttctcttctgctctcggtgtggtccccctcaatgggatcatgcaacgagaacattttggtgtggaacgtgcgaggtctgaactcgcgcgcccgccgggatgctgtgcgtgatgtagtccgtgatgagcatgtctctcttctctgtcttcaggagactattatggatgtaatcccctctcgtactattctagaaatgctaggcctcgactttgattattctttcttgtctgcggtcggtcggagtgggggggtgttgcttgcctggcggacgaccgtctggtctgtctcagatgttcaccttgcggatttctctcttaccgcgttggtttaacactcttctgatgtcgccccctggtggctctccatcgtctatgggccacaggaggagccggacaagcttcgtttcttagatgagcttcgttcgctgcgctcctctcgcacggggccgtgggccgtcgtaggcgatttcaacctcattctcgaagctcaggataaaaacaaccttaatctcaatcgtcgtatgatgggtcgttttcgtcggctcatcgacgagttggaactccgggagctgccgcttgacggacgtcgcttcacttggagcaatgagcgtgagtcgcccacgcttgttaagctcgaccgcgtcctcttctctgcggattgggaagagcttttcccctcttgcctcctccaagcggcctcttctatcgcctctgatcactgtgctcttctccttcatacctgcgtcacctccccgaaagcgcatcgttttcgttttgaggccttttggcccaagttcgacggctttcttcaagtcgtgtaggacgcctggcatccccctgccaacctaccccctcttgccgctcttgcttggtgcttctctaccatggccaagcgcttacagagctggagtgaccgtcacattggcagtgttcgtctgcagcttcagatggcgaaggaacttgtcttccggcttgatgttgcgcaggagagtcggtctctttcccccttggaaacctggctgcggcgagatttaaagttgaagtgtcttggtcttgcctcgcttgagcgtactatcgcgcgtcagcgttcgcgtttggtctggcttaaggagggtgacgccaataccaagttcttccacctgcacgccagagctcgtaggcggaagaacttcatcacgcgcctttatgatggtgaccagcttgccgtctcccatgatgcgctgcaagagcttgcctcctctcacttttgcgccatcttggggacgagcgtcgagcgtgaactcgccctagacctccactctcttggcctccgccctgcgtagcttgaggggctggactgtcccttcacagaggatgaggtctgggcggtgatcaagtccttgccctctgataaggcgcccggtcctgacggttttacgggccgtttctacaagtcttgctggccggtgatcaaggtcgaaattctggcggctcttaactccttgttcctgaccaacggccaaggtttcgcttccctcaacgacgccctaatctccctcttgccgaagaaggacgaggctgttgacgttaaggatttcaggccgattagccttattcacagctttgggaagctgttctccaagatcttggcctctcgtctctctcctcgcctggacgagcttgtggcgcctaatcagagcgctttcatcaagggccgctctctccatgacaactttcgctatgtccagcttgcggcaagggcgctccacgccaaacgcgttccccgacttcttctcaaggtggatatcgcgaaggcctttgacacggtcagctggcctttcttgcttgaggtgctagcccagcttggcttcagtcaacgttggcgtgattggatctccctcattctcagtgcctcctcttcccgggtgctggttaatggggtgccaggtccacggttcccccatcggagaggtcttcgccaaggagatcctctttcccccatgcttttcattctagtcatggatgtgctcaatgcgatgctccgcaaagcctctgactcgggtggttttcttcccctcaatgatcgttctattcgacatcgtgcatccctctacgccgatgatctagttctcttcctttcccccgttcggcaagaccttgagttcatccaaggcatcctctctgtcttcggtgccgcttccgggcttcggaccaacttcaccaagtgctcgattactccgatccgctgctcggttcttgacctggagctggttcagtcctcttttccttgctcgatctcggagtttccctgcacctacctcggcattccactgtcagttcgcaagctgccaaaagcggccctgcaaccgcttgtggataaagtctcccattggctccccccctggaagggctgtctaaccactctggcgggtcgctcggttctagtccagtcggttctctcttccattccggtccatgtttctatggcgatcg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ctgtcggtgatatgggaccgggggtatcgtgactagaggcttgggcagccgcggtcacccacgtggcctgaccccctcggggggtgggcgggcccgagggtgacgtggccacccctccctctgtctccccgaggggtcgggccgctcccgtttcggccccgagggctggggcgccccgaccccctgtggtattggcgccacgtgtgtgggttaggtgggcacagcggcgctcacctaaccgcatttatagctgattggacgagcgcgtcacgccgcatttaatgcggcgcagcgcacgtttatccggtccgtgaccagtcgcggtgtgtgaccggtcacagaccggtcagatcgcgggttaggtggcaacaggcggcctgtcacacgcctcgccccgtcccgtcggaatgatgagagcttcctggctctcgtccctagccggagccggcgtgctaactcctggagttggtatgtcagtcccggtcagattcattccaggcttcagcgcaagtatggcaaggaagtcgccggccattaaatgaagtttgaaatgggcgtcctccgggaaagctgacgagcggggcaggagacgtgcgctctgcttgtcaaaggtcacttccggctgtagactagccctcattgtaaaaagcatgtttcctttcttaggcagctagaggcccatgtggtgacccctgaccagataaaaaggaggcccaggcctaagagagaagggaggaagacggggggctagagcggaaactctgtctggctctccggcactctgtattccttcacacacagatccaccagaacacaggagtagggtgttacgcttctcagcggcccgaacctgtctacgtcgcccgtgtcttgtgcgcttcctttctcgctgacattcctcagatcgagggcgaagaatctcacttagcgcccccggccgaaccggcaaagggaggcctgcgcggtctcccggtgaggagccccacgctccgtcaatatcatattataaacataagattggaaacatccaaaatttgaccaaaaatttaaaatctgatatttcagaatttttgcccaaattttggaagtttttgtttcaggggtagtcatttggacaaaattgtacattactaatgaaagctaatcggatggcaatggtaaatcatagaagttaagtaaaagttgatggtatattatagaacgttataaagtcagtggcaaatcgtagacatgtgacaaactcggtgccatataatggattctctctatgttataccatgtccggggcatttcgttgctatgctggcagggagctgctaggggcaagctagtatagtgcaatgttccgtagcatccaagattccctcattatttatagcgtgtatatcaaactactagtatatatagcatgtgccgcatccataatacgcatgtaagaaatcaagctacaattcaagtttatgtgcagctagctagaccactaatgttaccatcatatattttttctagaatcttttactgaaatatatgaatagaggcgcagccactgtggtgggatggggtctggccttccccaacagcccagtaacaaccagcccctcctttcctacaccccaatagtttacttttgcttttaaatactaccttttatcaacatataagtaaaaataaccatgtactattttctttttaaaatatatgacaccgttaacttttcgcataacgtttgatcattaatcttatttaacaatttagtataaatatgtaaaagtataagttaagattatattttatttgatgataaaacaagtcataataaaataaatgatatatatatataataaaacaaaatagtcaaacattatgtgaaaagtcaatagcatcatacatttttaaatggaatatattttttatatcattagttgtctaacacttcaaaggtataatttcacctctccaattaaatttcaatttttctaaaatattagttaatacttgcatgaagatgcgtatatagtttgtttctcattttactaaaatatagttttttttggattgcttgtcaatttatttggaattttagctcggatgatactatcaccgcttatgattgtctgcttaatactcataggctaaattgaaatgaataaatatattcggtatatcaacatacctaccttttttattatcatgtgctattttttagttgatacgatatattacgtacctttgggaaacattacgtatattttttacactatatttttaataatcataatcgctttgtgaagttcgtcttcctcgtatctaaatcctagcttcactacgttgcatgtacaaaatgaggggacgtacccttaactttaatgaacaaaacgacattttacgaactactgagctacgagcaaagacactccacgaaatcgaaatgttaacttatatattttttttttttgaaaactagagggtgcatgcagcggtcgaagatgtagtttttgctagtctcattatagtctcttacactcattatagtctcagttcttcacaatatatattgattactattgaattatattcccaggtttcggaggacccaaacttggtaaaccgaatcgttgcatatttgaaggagcttcagtttccgatatgcttagaggtaccgagttctactccttctccagacgaaacagaagatgccgacaccgtgttcgatggcctcattgaagaggaccagatggtcatactccagggagaagacgagctaggcgacgtcgtcgtcgctgagtgcgagaccaacggcgccaaccccgaaacgatcaccatggagaccgacgagttctacagcctctgcgaggagctggacctggacctcggttcttatcagctagtcccgacgtcggcacgggagacggtggctgcggcggcggcggcggctaacgatgtcgacggcgttgcatactctcacgcctcgtgtttcgtgtcatggaaaagagcgaacccggcggagaaggtggtggccgtgccgatgactgcaggcatagagtcacagaagttgctgaagaaagctgtaggcggcggcaccgcatggatgagtaatattgatgatcgtggtagcgtggcaataacgacgactccaggaagtaacatcaagagccatgtcatgtcagagagaaggcgccgagagaagctcaacgagatgttcctcattctgaagtcactactcccctccgtccgcaaggttagttaacttagcgttccatactgaaagttatataggagtagtattattcatcgagctgtggattgtccctgcaggttgacaaggcatccatacttgcagaaacgataacctacctcaaagtgttagagaaaagagtgaaagagctggagtccagcagcagggagccatcgcgttggcggccaaccgaaattggacaggggaaggcgccgtaagatcaccgggaaggaggtctatgagatcggtgtcagtggtggtacctcgtcggtacctcgtcaacaccgtacgtatatgatatgcatgtataagatcaccgggcaggaggtctctgagatggatgtcatacggtgttgacgaggtaccgtacgtatgatatatagttatcgttttcattatggaaaaaaaattccgaattacctcgtgtactataaaagacgcgaatattagggaagaatctaatatcaaataattagaaggggtgaggtttcgaatccaggtcgtctatcacaccaccttgtgaagctagccggaaaacccttaagcgtttctctacctccatgtactattggtgccatctgaattaccgcttactaat</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060066.1 RefSeq:Os04g0557500]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 4]]
[[Category:Chromosome 4]]

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''OSB2''''' in 2001<ref name="ref1" /> by researchers from Japan.
+The rice gene Os04g0557500 was reported as '''''OSB2''''' in 2001<ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=> OSB2,OsOSB2
+*'''''Os04g0557500 <=> OSB2,OsOSB2
 ===Function===

@@ Line 6: / Line 6: @@
 ===Function===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''OSB2''''' locates on the Purple leaf (Pl) locus of rice (Oryza sativa L.) which affects regulation of anthocyanin biosynthesis in various plant tissues.
+* The cDNA of '''''OSB2''''' shows significant identity to the basic helix-loop-helix (bHLH) proteins found in the maize R gene family.
-===Mutation===
+* A transient complementation assay showed that the anthocyanin pathway is inducible by OSB1 or OSB2.
 ===Expression ===
 ===Evolution===

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene  was reported as '''''OSB2''''' in 2001<ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*''''' <=> OSB2,OsOSB2
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+*Research Institute for Bioresources, Okayama University, Kurashiki, Okayama, 710-0046 Japan
 ==References==
 <references>
 * <ref name="ref1">
+Sakamoto W, Ohmori T, Kageyama K, et al. The Purple leaf (Pl) locus of rice: The Plw allele has a complex organization and includes two genes encoding basic helix-loop-helix proteins involved in anthocyanin biosynthesis[J]. Plant and Cell Physiology, 2001, 42(9): 982-991.
 </ref>
 </references>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]

← Older revision		Revision as of 19:57, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os04g0557500\|		GeneName = Os04g0557500\|