Os04g0584600 - Revision history

192.168.72.52: /* Structured Information */

2015-06-12T07:10:42Z

‎Structured Information

Zhangye at 15:43, 28 January 2015

2015-01-28T15:43:57Z

Zhangye at 11:38, 7 January 2015

2015-01-07T11:38:55Z

124.16.129.48 at 19:58, 22 July 2012

2012-07-22T19:58:14Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os04g0584600| Description = Similar to Calcium dependent protein kinase| Version = NM_001060205.1 GI:115460139 GeneID:4336783| Length = 4456 bp|..."

2012-06-24T11:24:44Z

Created page with "{{JaponicaGene| GeneName = Os04g0584600| Description = Similar to Calcium dependent protein kinase| Version = NM_001060205.1 GI:115460139 GeneID:4336783| Length = 4456 bp|..."

New page

{{JaponicaGene|
GeneName = Os04g0584600|
Description = Similar to Calcium dependent protein kinase|
Version = NM_001060205.1 GI:115460139 GeneID:4336783|
Length = 4456 bp|
Definition = Oryza sativa Japonica Group Os04g0584600, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
AP = Chromosome 4:29929794..29934249|
CDS = 29930123..29930272,29930378..29930849,29931376..29931519,29931608..29931760,29931906..29932021<br>,29932497..29932664,29933144..29933368,29933789..29933911|
GCID = <gbrowseImage1>
name=NC_008397:29929794..29934249
source=RiceChromosome04
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008397:29929794..29934249
source=RiceChromosome04
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgggcaacgcatgcggcggttcccttagatccaagtacctgagcttcaagcagaccgcgtcgcagcgccacgacaccgacgacaacaacaacgccgccgcggccgactcgccgaagaagccctcccgccctccagcagccgccaagacggacctctacgccatgggcaggaagctcgggcaggggcagttcggcaccacctacctctgcaccgagctgtccactggggtggactacgcctgcaagtccatttccaagcgcaagctcatcaccaaggaggacatcgaagacgttcgccgcgagatccagatcatgcaccatctctcgggccacaagaacgtcgtcgccatcaagggcgcctacgaggaccagctatacgtgcacatcgtcatggagctctgcgccggcggcgagctcttcgatcgcatcatacagcgcggccactacagcgagcggaaggccgccgagctcacgcggatcatcgttggggtcgtcgaggcctgccactcgctcggggtcatgcaccgggacctcaagccagaaaacttcctgcttgccaacaaggacgatgacctctcgctcaaggccatagattttggtctctcagtcttcttcaagcccggtcaaacttttaccgatgttgtcggaagcccatattacgtagctccagaagtgttgttgaaacactatggaccagaagctgatgtatggactgcaggtgtcattctctacattttactaagtggtgtacccccattctgggcagagacacaacaaggaatatttgatgctgtactaaaaggtttcattgattttgattctgatccttggcctgtgatctctgagagcgcaaaggatcttataacaaaaatgctcaatcctcgcccaaaggaacgcttaacagcacatgaagttctatgccatccatggattcgtgatcacggagttgctccagatcggcctcttgatccagctgtcctatctcgcatcaagcagttctctgcaatgaataagttgaagaagatggctttgcgggtaatagctgagagtctctcagaggaggaaatcgctgggttgaaggaaatgtttcagactatggatgctgataacagtggtgcgatcacatatgatgagcttaaagaaggcttgagaaaatatggctcaacacttaaggacaccgagattcgtgatcttatggatgcagcagatatagacaacagcggaacaattgattatatcgaattcattgctgcaacattgcatctcaataaactggagcgagaggaacatcttgtggcagctttttcatattttgacaaagatggaagtggttacatcacagtggatgaactgcagcaagcttgcaaagagcataacatgcccgatgcttttcttgatgatgtcatcaatgaagctgatcaggacaatgatgggcgcattgactatggagaatttgttgccatgatgaccaagggcaatatgggagtcggacgaagaacaatgagaaacagcttgaatatcagcatgagggacgcacctggtgcactctag</cdnaseq>|
AA = <aaseq>MGNACGGSLRSKYLSFKQTASQRHDTDDNNNAAAADSPKKPSRP PAAAKTDLYAMGRKLGQGQFGTTYLCTELSTGVDYACKSISKRKLITKEDIEDVRREI QIMHHLSGHKNVVAIKGAYEDQLYVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI IVGVVEACHSLGVMHRDLKPENFLLANKDDDLSLKAIDFGLSVFFKPGQTFTDVVGSP YYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGFIDFDSDP WPVISESAKDLITKMLNPRPKERLTAHEVLCHPWIRDHGVAPDRPLDPAVLSRIKQFS AMNKLKKMALRVIAESLSEEEIAGLKEMFQTMDADNSGAITYDELKEGLRKYGSTLKD TEIRDLMDAADIDNSGTIDYIEFIAATLHLNKLEREEHLVAAFSYFDKDGSGYITVDE LQQACKEHNMPDAFLDDVINEADQDNDGRIDYGEFVAMMTKGNMGVGRRTMRNSLNIS MRDAPGAL</aaseq>|
DNA = <dnaseqindica>330..479#585..1056#1583..1726#1815..1967#2113..2228#2704..2871#3351..3575#3996..4118#gttgcgctcgctttcccccaaacgtgacccggccgggagggagaagtcgccatgaagcagcctcccgctgctgctttctctctctcgcctcgttaaaatctctcttccaccccgaaccccatccagttcagttccctctcgatcgcttcccgtgctctcgctctctcgcttgctagatcagagattcccctctgcggcggttgtgaggtttccgcttcggctcgctagctagctctgctgtttctgtgagagccgggagcaccaaccgcgcgtggggtgggtgcccggagctttgatgcgcgtggccgccggtttctccccgtcgtttgatgggcaacgcatgcggcggttcccttagatccaagtacctgagcttcaagcagaccgcgtcgcagcgccacgacaccgacgacaacaacaacgccgccgcggccgactcgccgaagaagccctcccgccctccagcagccgccaagacggacgaccacccagtctccgcgtcggcgccggccgccgccatgaggcgcggccaggcgcccgccgacctcggctcggtgctcggccaccccacccccaacctccgcgacctctacgccatgggcaggaagctcgggcaggggcagttcggcaccacctacctctgcaccgagctgtccactggggtggactacgcctgcaagtccatttccaagcgcaagctcatcaccaaggaggacatcgaagacgttcgccgcgagatccagatcatgcaccatctctcgggccacaagaacgtcgtcgccatcaagggcgcctacgaggaccagctatacgtgcacatcgtcatggagctctgcgccggcggcgagctcttcgatcgcatcatacagcgcggccactacagcgagcggaaggccgccgagctcacgcggatcatcgttggggtcgtcgaggcctgccactcgctcggggtcatgcaccgggacctcaagccagaaaacttcctgcttgccaacaaggacgatgacctctcgctcaaggccatagattttggtctctcagtcttcttcaagcccggtaagctacttatgcagaacacaaaggctttaaactgtgttttaatccactattccgatgcaaaattggtgttgcgattcgcaaatattgtagcgtcacattagagttaacatgcatcggttaatccattgtctgaagaaaaaaaaatggaggcaacatgcaactgcaattctcagtttctgaataattagttgggcatatagtggaacattcaagggtagcactacagcagtgggaacattgttaatgagttcattgcatcctgcaaggtctgaaatacacgttcgttggggagcagctgaatggcagagtaaactgatggaagctagttcactgggaggatttctgagttaaatgtagtggaaaacgatggaagctgaacgacatcttgttctaataaacatctgtaatgctgtattctgtattgtggggaatttgatgtttccataagctaaattaggttactgtaggcatatttatatgagcttgtgcctccttttattcttcgtcttcttttccatctcaggtcaaacttttaccgatgttgtcggaagcccatattacgtagctccagaagtgttgttgaaacactatggaccagaagctgatgtatggactgcaggtgtcattctctacattttactaagtggtgtacccccattctgggcaggtaaattttgatttcccccttcaattaacctgggaagcttgttttctgatgattgtagcttgacatttttcgtatgtatacaatgcagagacacaacaaggaatatttgatgctgtactaaaaggtttcattgattttgattctgatccttggcctgtgatctctgagagcgcaaaggatcttataacaaaaatgctcaatcctcgcccaaaggaacgcttaacagcacatgaagttctatgtatgtttcttttactatattttttttgacaaaattcttttactatgttgtactcgtggtcttatttttctctctaatgcctatccaatcacttgacacatttgcaactgccgggagaaaatgtaacacttcaactcttgctcaggccatccatggattcgtgatcacggagttgctccagatcggcctcttgatccagctgtcctatctcgcatcaagcagttctctgcaatgaataagttgaagaagatggctttgcgggtacgcatgataactttaagcttaagttttaaattaccagctttgtgatacattggcttttttttttctctacaatagactgtttattttgctctatgataagcttttcgcctaatctttcaacttgaactgaatgcatagaaggtgaccttttcactgccagctgttgacaagtttttgtagtgacttttattcactaaaaaatagtactatactcaaagtggtttcttttgggggcaatactatgtctttttgttgtttctgttgaacggtcacccacccaccatatttattaaatgtgaccggatttgttataacactagggaggtatgatggtttgatcatttcttttcagtctccccttaatactagggagctattgaagcaaaccatgttgaattttggaacctgtactgttggtgaagcataattagtgggttttgcatttatgaacaatttgtgtttatcctaccaggtaatagctgagagtctctcagaggaggaaatcgctgggttgaaggaaatgtttcagactatggatgctgataacagtggtgcgatcacatatgatgagcttaaagaaggcttgagaaaatatggctcaacacttaaggacaccgagattcgtgatcttatggatgcagtaagttaacttcaacctatttgaatgctgctttcgatttcttctgtgttagtgacttatattttgaagatacttaaggaccttgaacttaaagttaccttaaaacattctgaataaaatgccttttggtgtcatattacttataagtcggtcgagacttgagaaactcttggttaaaaaaagaaagatatgagaaactcaagctgcttcctgcctcacaagattacttgacttcatggagaagcttgagcgcttaagagagaagtcattacccatacattttcctttttgttggctgttttctttagagtatctatgattagaaaacatgcagcaggcagatcttgccttcttaaatttctttgtaggctgataacttcagcctcatgattgtctttctactgcaaacatttcaaaaacaggttaacatggtaaatcaagaagcttacattgtcccttttgttctgttgtttcatcaggcagatatagacaacagcggaacaattgattatatcgaattcattgctgcaacattgcatctcaataaactggagcgagaggaacatcttgtggcagctttttcatattttgacaaagatggaagtggttacatcacagtggatgaactgcagcaagcttgcaaagagcataacatgcccgatgcttttcttgatgatgtcatcaatgaagctgatcaggacaatgtaagtatagtgttgatacctcctgatgtgctatataactatgttatatattattctggtatagctgggatgtgtacaaaaatgaatgtgcaagcagcggatgcaataaagtttgttcaattagttaagacaattaaaggctttgcattggattgtttagtattgaggtggaaaaccaaccatagtacctgaactacctaggtcttgaaactctttcaatccattattgggatcacatatgctctagtaggtggttagctgtccagtcatgtgctttacttaacaaaggcctagggacttctcttcaataaccagcagaattcattttgttacttcattaatgaatgtttatggttatgttagtagcaaaaagaagttagtgccatgacttgtttgcctaatgttgctcccttttgtcaggatgggcgcattgactatggagaatttgttgccatgatgaccaagggcaatatgggagtcggacgaagaacaatgagaaacagcttgaatatcagcatgagggacgcacctggtgcactctagacttccacgatgtacagcttacggattttagcttcttcctgtcttcctgcccaacgaactcctgcgattttttagcgttgtcagatgtccgcggatgtgtttttctggtggttctgatttaacttgtcaattgattccatggaatgcataacaagatgtccatgccacgctcaaacgaagctgggttgtaaatctctcgtacgccattgctcaactctgaaggtgttcggtgaactagctcgtattctttgtgttgcaatggatgaacttatactggctgtgttgggtgtaattgcattgccaacatttacaggggcatgtgagatcccgctttatcc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060205.1 RefSeq:Os04g0584600]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 4]]
[[Category:Chromosome 4]]

@@ Line 1: / Line 1: @@
-''OsCPK13''(also named ''OsCDPK7''), is a mumber of CDPKs (calcium-dependent protein kinases),which confers both cold and salt/drought tolerance on rice plants]<ref name="ref1"/><ref name="ref2"/>.
+''OsCPK13''(also named ''OsCDPK7''), is a member of CDPKs (calcium-dependent protein kinases),which confers both cold and salt/drought tolerance on rice plants]<ref name="ref1"/><ref name="ref2"/>.
 ==Annotated Information==
 ===Function===

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+''OsCPK13''(also named ''OsCDPK7''), is a mumber of CDPKs (calcium-dependent protein kinases),which confers both cold and salt/drought tolerance on rice plants]<ref name="ref1"/><ref name="ref2"/>.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:OsCDPK7 model.jpg|right|thumb|300px|'''Figure 1.''''' A model for OsCDPK7-mediated cold-and salt/drought-stress signal transduction.（from reference <ref name="ref1"/>).'']]
 ===Expression===
-Please input expression information here.
+*Expression of the OsCDPK7 mRNA, around 2.3 kb in size, was increased  by cold and salt stresses in both shoots (Figure 2a)  and roots (data not shown) of  10-day-old seedlings, but not by  exogenous abscisic acid (ABA) application. In contrast, a rice stress-responsive  gene，rab16A<ref name="ref4"/>, was induced by the salt and ABA treatments (Figure 2a). This indicates that OsCDPK7 belongs to  a  subclass  of  stress-inducible CDPKs， which is probably conserved from monocotyledonous to dicotyledonous plants<ref name="ref1"/>.
 ===Evolution===
-Please input evolution information here.
+[[File:CDPKs Phylogenetic tree.jpg|left|thumb|250px|'''Figure 3.''''' Phylogenetic tree for the amino acid sequences of CDPKs.（from reference <ref name="ref1"/>).'']]
 ==Labs working on this gene==
-Please input related labs here.
+*Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

← Older revision		Revision as of 19:58, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os04g0584600\|		GeneName = Os04g0584600\|

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]