Os04g0610800 - Revision history

Liman: /* Annotated Information */

2016-10-09T05:07:40Z

‎Annotated Information

2016-10-09T05:07:12Z

‎Annotated Information

2016-10-09T05:06:47Z

‎Function

2016-10-09T05:05:12Z

‎Annotated Information

2016-10-09T05:04:21Z

‎References

2016-10-09T05:03:37Z

‎Expression

2016-10-09T05:01:06Z

‎Annotated Information

2016-10-09T04:59:24Z

‎Evolution

2016-10-09T04:58:18Z

‎Function

2016-10-09T04:48:55Z

‎Function

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 * '''''RLIN1''''' may be a tetrapyrrole biosynthesis gene is involved in lesion formation in rice.
 ===Mutation===
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 * Two weeks after seeding, the mutant rlin1 had already begun to develop lesions on the young leaves and leaf sheaths shortly after full leaf expansion in both Beijing (N: 39.92_) and Hainan (N: 18.48_). The lesions initiated as small spots or stripes, then spreaded through the main vein of leaves or the middle part of the leaves. At the same time, more severe lesions were formed on the leaf sheaths. In the reproductive growth phase, lesions were also found on the spikes and spermoderms. Besides these, rlin1 showed slightly reduced plant height and later flowering phenotype compared to the wild-type (Fig. 2).
 ===Expression===
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 * The expressions of RLIN1 were examined in different organs by quantitative real-time RT-PCR, and it showed RLIN1 was expressed in all the organs tested, and the expression level was much higher in roots than in the other organs, suggested RLIN1 had important functions in roots. This was corresponded to the report that the tetrapyrroles such as heme might be present in all organs<ref name="ref2" />. Besides roots, RLIN1 expression levels decreased in the order of leaf sheaths, leaves, culms, with the lowest expression in the panicles, this expression pattern was consistent with the lesion mimic phenotype of rlin1 (Fig. 6).
 ===Evolution===

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 ===Expression===
-[[File:Os04g0610800-3.png|right|thumb|400px|'''Fig. 6. Expression patterns of RLIN1 in different organs.''' '' <ref name="ref1" />.'']]
+[[File:Os04g0610800-3.png|right|thumb|200px|'''Fig. 6. Expression patterns of RLIN1 in different organs.''' '' <ref name="ref1" />.'']]
 * The expressions of RLIN1 were examined in different organs by quantitative real-time RT-PCR, and it showed RLIN1 was expressed in all the organs tested, and the expression level was much higher in roots than in the other organs, suggested RLIN1 had important functions in roots. This was corresponded to the report that the tetrapyrroles such as heme might be present in all organs<ref name="ref2" />. Besides roots, RLIN1 expression levels decreased in the order of leaf sheaths, leaves, culms, with the lowest expression in the panicles, this expression pattern was consistent with the lesion mimic phenotype of rlin1 (Fig. 6).

@@ Line 7: / Line 7: @@
 * '''''RLIN1''''' encoded a putative coproporphyrinogen III oxidase in tetrapyrrole biosynthesis pathway.
-* RLIN1 may be a tetrapyrrole biosynthesis gene is involved in lesion formation in rice.
+* '''''RLIN1''''' may be a tetrapyrrole biosynthesis gene is involved in lesion formation in rice.
 ===Mutation===

@@ Line 16: / Line 16: @@
 ===Expression===
+* The expressions of RLIN1 were examined in different organs by quantitative real-time RT-PCR, and it showed RLIN1 was expressed in all the organs tested, and the expression level was much higher in roots than in the other organs, suggested RLIN1 had important functions in roots. This was corresponded to the report that the tetrapyrroles such as heme might be present in all organs<ref name="ref2" />. Besides roots, RLIN1 expression levels decreased in the order of leaf sheaths, leaves, culms, with the lowest expression in the panicles, this expression pattern was consistent with the lesion mimic phenotype of rlin1 (Fig. 6).
 ===Evolution===

@@ Line 39: / Line 39: @@
 Sun C, Liu L, Tang J, Lin A, Zhang F, Fang J, Zhang G, Chu C. RLIN1, encoding  a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice. J Genet Genomics. 2011 Jan;38(1):29-37. doi: 10.1016/j.jcg.2010.12.001. PubMed PMID: 21338950.
 </ref>
 </references>

@@ Line 10: / Line 10: @@
 ===Mutation===
-[[File:.png|right|thumb|400px|'''Fig. 2. Phenotypes of mutant rlin1. A: plants of wild-type (light) and rlin1 (right). B: leaf sheath of wild-type (right) and rlin1 (left). C: leaves of wild-type (right) and rlin1 (left). D: panicles of wild-type (right) and rlin1 (left).''' '' <ref name="ref1" />.'']]
+[[File:Os04g0610800-1.png|right|thumb|400px|'''Fig. 2. Phenotypes of mutant rlin1. A: plants of wild-type (light) and rlin1 (right). B: leaf sheath of wild-type (right) and rlin1 (left). C: leaves of wild-type (right) and rlin1 (left). D: panicles of wild-type (right) and rlin1 (left).''' '' <ref name="ref1" />.'']]
@@ Line 19: / Line 19: @@
 ===Evolution===
+[[File:Os04g0610800-2.png|right|thumb|400px|'''Fig. 4. phylogenetic tree analysis using Clustal X and MEGA4.''' '' <ref name="ref1" />.'']]
 * Alignment of RLIN1 with its homologs showed that the CPOX proteins were highly conserved in different species, especially in the C-terminal region (Fig. 4B).

@@ Line 5: / Line 5: @@
 *'''''Os04g0610800 <=> CPO, CPOX, LLM1, RLIN1
 ===Function===
+* '''''RLIN1''''' encoded a putative coproporphyrinogen III oxidase in tetrapyrrole biosynthesis pathway.
 ===Expression===