Os05g0129300 - Revision history

192.168.72.52: /* Structured Information */

2015-06-12T07:29:00Z

‎Structured Information

Zhangye at 09:33, 12 March 2015

2015-03-12T09:33:27Z

124.16.129.48 at 20:03, 22 July 2012

2012-07-22T20:03:45Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os05g0129300| Description = Basic/leucine zipper protein| Version = NM_001061079.1 GI:115461888 GeneID:4337699| Length = 1374 bp| Definition = ..."

2012-06-24T10:05:24Z

Created page with "{{JaponicaGene| GeneName = Os05g0129300| Description = Basic/leucine zipper protein| Version = NM_001061079.1 GI:115461888 GeneID:4337699| Length = 1374 bp| Definition = ..."

New page

{{JaponicaGene|
GeneName = Os05g0129300|
Description = Basic/leucine zipper protein|
Version = NM_001061079.1 GI:115461888 GeneID:4337699|
Length = 1374 bp|
Definition = Oryza sativa Japonica Group Os05g0129300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
AP = Chromosome 5:1695754..1697127|
CDS = 1696307..1696753|
GCID = <gbrowseImage1>
name=NC_008398:1695754..1697127
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008398:1695754..1697127
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgtcgtcgccttcgcgccggagctccagcccggagagcaacaccagcggcggcggcggtggcgccgacgagcggaagaggaagaggatgctgtcgaacagggagtcggcgaggcgatccagggcgaggaagcagcagaggctggaggagctgatcgccgaggcggcgcgcctccaggccgagaacgcgcgcgtcgaggcgcagatcggggcctacgcgggggagctgagcaaggtcgacggcgagaacgcggtgctccgcgcccgccacggcgagctcgccgggcgcctccaggcgctcggcagcgtcctggagatcctccaggtggccggcgcgcccgtcgacatcccggagatccccgacgacccgctgctccgcccatggcagccgccgttcgcggcccagcccatcgtcgccaccgccatggccgacgccttccagttctga</cdnaseq>|
AA = <aaseq>MSSPSRRSSSPESNTSGGGGGADERKRKRMLSNRESARRSRARK QQRLEELIAEAARLQAENARVEAQIGAYAGELSKVDGENAVLRARHGELAGRLQALGS VLEILQVAGAPVDIPEIPDDPLLRPWQPPFAAQPIVATAMADAFQF</aaseq>|
DNA = <dnaseqindica>554..1000#ttccccatccgtctaattgcgccccttatgcattagagcccccggagtcccctctgtttcgcagataagtcctttggttcccatctttttattacattcaggtcctcctagtttcttttcctttcgagtctactccttgcattcttgcgaggaagcccctcgggttggtcgaattttagtttccactccctctcctcggggagtcgttgctgttcttgttcttggtcgaggttgaggttggtggcgtagatccgatctgaggaatgtttacctatcctttcctctaacgttcgccgtactccgatgaagttgaacgtgctccgccgccgccgttcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactcatcgccttcctcccaagaacaccatctccagcctctaattgattatatcttgatttctttttcatcctcctactagtttctttcttgtgttctttggaatttttttgatctcttgaagagatccggttcttggattaagttttggacaagaaccgtactgtgaccatgtcgtcgccttcgcgccggagctccagcccggagagcaacaccagcggcggcggcggtggcgccgacgagcggaagaggaagaggatgctgtcgaacagggagtcggcgaggcgatccagggcgaggaagcagcagaggctggaggagctgatcgccgaggcggcgcgcctccaggccgagaacgcgcgcgtcgaggcgcagatcggggcctacgcgggggagctgagcaaggtcgacggcgagaacgcggtgctccgcgcccgccacggcgagctcgccgggcgcctccaggcgctcggcagcgtcctggagatcctccaggtggccggcgcgcccgtcgacatcccggagatccccgacgacccgctgctccgcccatggcagccgccgttcgcggcccagcccatcgtcgccaccgccatggccgacgccttccagttctgagccaccatggagagctcgcacgccatggccattggcatcaatggcatggttgcagctgcattacaactagtagtactagcctctgtggttgtgtctgatgatgcttattatgtttaattatggtttgcttcatgttgttttcattaatctagaccattaataagcaatgtgtgttgtaatcttgtctagtcttatgtgagatgtgttcatctccagtgctccttgctaataagggtggaagagaacaatccgatttgatgtaattcttggagagcacatgtgtgctggtttgtgatgtgatgaactgatgattgtaatattttgacattgaacctatgctataatgtttgcagcaatgaatctatccttgtgtc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061079.1 RefSeq:Os05g0129300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene Os05g0129300 was reported as '''''LIP19''''' in 2005<ref name="ref1"/> and 1993<ref name="ref2"/>, '''''OsbZIP38''''' in 2008<ref name="ref3"/>, respectively.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+*The rice low-temperature-induced ''lip19'' gene encodes a 148-amino-acid basic region/leucine zipper (bZIP) protein, termed ''LIP19''. It '''lacks the usual ability of bZIP proteins''' to '''homodimerize''' and to '''bind DNA''', as does the Fos protein in mammals. Once the temperature returns to 25°C, the instability of ''LIP19'' may '''switch off''' this '''low-temperature signaling'''<ref name="ref1"/>.
 ===Expression===
-Please input expression information here.
+*The expression patterns of ''lip19'' and ''OsOBF1'' in '''response to low temperatures''' were totally '''opposite'''. '''In leaf blades''' of rice plants exposed to 5°C for 24 h, ''lip19'' transcripts were '''abundantly''' and '''primarily''' detected in '''mesophyll cells surrounding vascular bundles'''<ref name="ref1"/>.
 ===Evolution===
-Please input evolution information here.
+*Sequencing and primer extension analyses showed that ''lip19'' has a long 5' non-coding sequence followed by a single open reading frame specifying a protein of 148 amino acids. The deduced amino acid sequence of the protein, Lip19, shows at its amino-terminus a conserved basic region followed by a "leucine-zipper" domain. The reported '''sequence most similar to ''Lip19''''' is '''maize ''OCSBF-1''''', which is a bZip-type DNA binding protein<ref name="ref2"/>.
-You can also add sub-section(s) at will.
+===Knowledge Extension===
 ==Labs working on this gene==
-Please input related labs here.
+*Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi, 980-8577 Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

← Older revision		Revision as of 20:03, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os05g0129300\|		GeneName = Os05g0129300\|

@@ Line 49: / Line 49: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]