Os05g0135700 - Revision history

Guangyi: /* Annotated Information */

2016-11-06T15:57:36Z

‎Annotated Information

Guangyi: /* Function */

2016-11-06T15:53:53Z

‎Function

Guangyi at 15:51, 6 November 2016

2016-11-06T15:51:49Z

Guangyi at 15:50, 6 November 2016

2016-11-06T15:50:06Z

192.168.72.52 at 08:18, 14 May 2015

2015-05-14T08:18:15Z

124.16.129.48 at 20:03, 22 July 2012

2012-07-22T20:03:56Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os05g0135700| Description = S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1)| Version = NM..."

2012-06-24T10:05:54Z

Created page with "{{JaponicaGene| GeneName = Os05g0135700| Description = S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1)| Version = NM..."

New page

{{JaponicaGene|
GeneName = Os05g0135700|
Description = S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1)|
Version = NM_001061110.1 GI:115461950 GeneID:4337733|
Length = 2909 bp|
Definition = Oryza sativa Japonica Group Os05g0135700, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
AP = Chromosome 5:2067081..2069989|
CDS = 2068523..2069713|
GCID = <gbrowseImage1>
name=NC_008398:2067081..2069989
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008398:2067081..2069989
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggccgcacttgataccttcctctttacctcggagtctgtgaacgagggccaccctgacaagctctgcgaccaagtctcagatgctgtgcttgatgcctgcctcgccgaggaccctgacagcaaggtcgcttgtgagacctgcaccaagacaaacatggtcatggtctttggtgagatcaccaccaaggctaacgttgactatgagaagattgtcagggagacatgccgtaacatcggttttgtgtcagctgatgtcggtctcgatgctgaccactgcaaggtgcttgtgaacatcgagcagcagtcccctgacattgcacagggtgtgcacggccacttcaccaagcgccctgaggagattggtgctggtgaccagggacacatgtttggatatgcaactgatgagacccctgagttgatgcccctcagccatgtccttgctaccaagcttggcgctcgtcttacggaggttcgcaagaatgggacctgcgcatggctcaggcctgacgggaagacccaagtgactgttgagtaccgcaatgagagcggtgccagggtccctgtccgtgtccacaccgtcctcatctctacccagcatgatgagacagtcaccaacgatgagattgctgctgacctgaaggagcatgtcatcaagcctgtcattcccgagcagtaccttgatgagaagacaatcttccatcttaacccatctggtcgcttcgtcattggcggacctcatggtgatgctggtctcactggccggaagatcatcattgacacttatggtggctggggagctcacggtggtggtgccttctctggcaaggacccaaccaaggttgaccgcagtggagcatacgtcgcaaggcaagctgccaagagcattgttgctagtggccttgctcgccgctgcattgtccaagtatcatacgccatcggtgtcccagagccactgtccgtattcgtcgacacatacggcactggcaggatccctgacaaggagatcctcaagattgtgaaggagaacttcgacttcaggcctggcatgatcatcatcaaccttgacctcaagaaaggcggcaacggacgctacctcaagacggcggcttacggtcacttcggaagggacgacccagacttcacctgggaggtggtgaagcccctcaagtgggagaagccttctgcctaa</cdnaseq>|
AA = <aaseq>MAALDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVA CETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQ SPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRK NGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVI KPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGK DPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDK EILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWE KPSA</aaseq>|
DNA = <dnaseqindica>1443..2633#gccgtgcccggtcggatctaattaatttacctcctccacctcctcctcctccccccgatcggatcggcccggctcctcctcctccgccgccgccaccgccgccgcaggtgagccgccgattcccctgtcctcgttgctggtagcgttgtcgcgtgtgtgttgctgctgctgctgctgctgctgtccggcttctcccttcattcttgcggcttgaaaagggagaggagggttttagcgttcttggtaggatcaagctctcaggttggatctgagctcgtggttggttgtcttgcggacgtatcatcgtgcctagatattgatttgtttgtgctggtttgggagggttataaggagggtttattgcttttctttcgatcttgtggtatggtagatttagatggggtttctttggttggatttaggtgttgtaagttttatttttgtcatgcttgcttattattatggatggagatggagagagaagcagtaggatgacttccttttagatgtttaataccttgatgcttatcaaacggcttgctgataaacaacatgctagagcagtggttttagtgctagtattatgtctttggctgtcagctcatttgactgttctgcggtagattcgagtcatccccttggtcttgggagttggaattcttataaatgaacggaaaatggaaaaaaaaattgattggtgccacttcaaagttaaatatgccaagacgaattgatatgtttctgctgttgttttatgctcttgattagttgatgcgcatgttcaatgatttatgatgtttgtctttgtggaaagattacatgtaaagagtatagtagaacccctaaaagctagccagcgatttcgctctttttttccaggtctccatgatatgtttacccctaaaagtggtatatttatgtgatagttacaatacatagtggcaccacgattgattatgcgtttatgctgattccggcagaaaattgttagattccttgtgctctatacctgcttgttgcgcttgtagagaatattacaaatacctaacacttgcccaaggaacttaggaacttagtcaactctttgtagggacaactattttagcccaaaattgtggtcttgtcaggtgccaacaaaacagcatcttggcgtacataagctatatagaggattaaaaggaatgttttgttccttgctactgtttttttaacctgtttactcaggacaaattttgttgcataaaccatttgttctagggatcagtattgtcctctcagtgtgttatgtaagcatttccagaaatcaattgtcgctatcagcttccctcacattagctatcacttatacccctttttttctcataggctcaccatgtccattttattcatgatatttctttgtctaaagtatgtgaaataccattttatgcagataggagaagatggccgcacttgataccttcctctttacctcggagtctgtgaacgagggccaccctgacaagctctgcgaccaagtctcagatgctgtgcttgatgcctgcctcgccgaggaccctgacagcaaggtcgcttgtgagacctgcaccaagacaaacatggtcatggtctttggtgagatcaccaccaaggctaacgttgactatgagaagattgtcagggagacatgccgtaacatcggttttgtgtcagctgatgtcggtctcgatgctgaccactgcaaggtgcttgtgaacatcgagcagcagtcccctgacattgcacagggtgtgcacggccacttcaccaagcgccctgaggagattggtgctggtgaccagggacacatgtttggatatgcaactgatgagacccctgagttgatgcccctcagccatgtccttgctaccaagcttggcgctcgtcttacggaggttcgcaagaatgggacctgcgcatggctcaggcctgacgggaagacccaagtgactgttgagtaccgcaatgagagcggtgccagggtccctgtccgtgtccacaccgtcctcatctctacccagcatgatgagacagtcaccaacgatgagattgctgctgacctgaaggagcatgtcatcaagcctgtcattcccgagcagtaccttgatgagaagacaatcttccatcttaacccatctggtcgcttcgtcattggcggacctcatggtgatgctggtctcactggccggaagatcatcattgacacttatggtggctggggagctcacggtggtggtgccttctctggcaaggacccaaccaaggttgaccgcagtggagcatacgtcgcaaggcaagctgccaagagcattgttgctagtggccttgctcgccgctgcattgtccaagtatcatacgccatcggtgtcccagagccactgtccgtattcgtcgacacatacggcactggcaggatccctgacaaggagatcctcaagattgtgaaggagaacttcgacttcaggcctggcatgatcatcatcaaccttgacctcaagaaaggcggcaacggacgctacctcaagacggcggcttacggtcacttcggaagggacgacccagacttcacctgggaggtggtgaagcccctcaagtgggagaagccttctgcctaaaagctccctttcggaggcttttgctctgtcccattatggtgttttgtttcctcgctgctcagcattgtgattcttaacctgccccccgctgccatttatgcccatgcacgctactttcctaataataagtacttataagggtattgtgtttgaatattttacctagaggaggaggaggatttgttatctgttattgcttaagcttatgtaatggtgaaagaaggaaagatgctacactactttgagaagaagaaatgaaacctcctatgttttggt</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061110.1 RefSeq:Os05g0135700]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-*SAM deficiency suppressing DNA and H3K4me3 transmethylations at flowering key genes led to a late-flowering phenotype in rice. This information could help elucidate the mechanism of epigenetic control flowering transition.
+*'''SAM''' deficiency suppressing DNA and H3K4me3 transmethylations at flowering key genes led to a late-flowering phenotype in rice. This information could help elucidate the mechanism of epigenetic control flowering transition.
 <br>
-===Expression===
+===Mutant===
-Please input expression information here.
+*RNA interference (RNAi) transgenic rice with downregulated transcripts of '''OsSAMS1''', 2 and 3 showed pleiotropic phenotypes, including dwarfism, reduced fertility, delayed germination, as well as late flowering. Delayed germination was largely rescued by application of SAM in the knockdown lines. Knockdown of OsSAMS1, 2 and 3 led to distinguished late flowering and greatly reduced the expression of the flowering key genes, Early heading date 1 (Ehd1), Hd3a and RFT1 (rice FT-like genes).
+<br>
 ==Labs working on this gene==

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-Please input function information here.
+*SAM deficiency suppressing DNA and H3K4me3 transmethylations at flowering key genes led to a late-flowering phenotype in rice. This information could help elucidate the mechanism of epigenetic control flowering transition.
 ===Expression===

@@ Line 1: / Line 1: @@
-The rice '''Os01g0909200''' was reported as '''OsDCL''' in 2005 <ref name="ref1" /> by researchers from the USA.
+The rice '''Os05g0135700''' was reported as '''	OsSAMS1''' in 2011 <ref name="ref1" /> by researchers from the China.
 <br>
 ==Annotated Information==
 ===Gene Symbol===
-*'''Os01g0909200 <=> OsDCL,DCL'''
+*'''Os05g0135700 <=>	OsSAMS1'''
 <br>
 ===Function===

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os01g0909200''' was reported as '''OsDCL''' in 2005 <ref name="ref1" /> by researchers from the USA.
+<br>
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 14: / Line 17: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Research Center for Molecular and Developmental Biology, Key Laboratory of Photosynthesis and Environmental Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
+*Graduate School of the Chinese Academy of Sciences, Beijing 100049, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]

← Older revision		Revision as of 08:18, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
−	~~GeneName = Os05g0135700\|~~
−	~~Description = S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1)\|~~
−	~~Version = NM_001061110.1 GI:115461950 GeneID:4337733\|~~
−	~~Length = 2909 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os05g0135700, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 5\|Chromosome 5]]\|~~
−	~~AP = Chromosome 5:2067081..2069989\|~~
−	~~CDS = 2068523..2069713\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008398:2067081..2069989~~
−	~~source=RiceChromosome05~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008398:2067081..2069989~~
−	~~source=RiceChromosome05~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggccgcacttgataccttcctctttacctcggagtctgtgaacgagggccaccctgacaagctctgcgaccaagtctcagatgctgtgcttgatgcctgcctcgccgaggaccctgacagcaaggtcgcttgtgagacctgcaccaagacaaacatggtcatggtctttggtgagatcaccaccaaggctaacgttgactatgagaagattgtcagggagacatgccgtaacatcggttttgtgtcagctgatgtcggtctcgatgctgaccactgcaaggtgcttgtgaacatcgagcagcagtcccctgacattgcacagggtgtgcacggccacttcaccaagcgccctgaggagattggtgctggtgaccagggacacatgtttggatatgcaactgatgagacccctgagttgatgcccctcagccatgtccttgctaccaagcttggcgctcgtcttacggaggttcgcaagaatgggacctgcgcatggctcaggcctgacgggaagacccaagtgactgttgagtaccgcaatgagagcggtgccagggtccctgtccgtgtccacaccgtcctcatctctacccagcatgatgagacagtcaccaacgatgagattgctgctgacctgaaggagcatgtcatcaagcctgtcattcccgagcagtaccttgatgagaagacaatcttccatcttaacccatctggtcgcttcgtcattggcggacctcatggtgatgctggtctcactggccggaagatcatcattgacacttatggtggctggggagctcacggtggtggtgccttctctggcaaggacccaaccaaggttgaccgcagtggagcatacgtcgcaaggcaagctgccaagagcattgttgctagtggccttgctcgccgctgcattgtccaagtatcatacgccatcggtgtcccagagccactgtccgtattcgtcgacacatacggcactggcaggatccctgacaaggagatcctcaagattgtgaaggagaacttcgacttcaggcctggcatgatcatcatcaaccttgacctcaagaaaggcggcaacggacgctacctcaagacggcggcttacggtcacttcggaagggacgacccagacttcacctgggaggtggtgaagcccctcaagtgggagaagccttctgcctaa</cdnaseq>\|
−	AA = <aaseq>MAALDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVA CETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQ SPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRK NGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVI KPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGK DPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDK EILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWE KPSA</aaseq>\|
−	DNA = <dnaseqindica>1443..2633#gccgtgcccggtcggatctaattaatttacctcctccacctcctcctcctccccccgatcggatcggcccggctcctcctcctccgccgccgccaccgccgccgcaggtgagccgccgattcccctgtcctcgttgctggtagcgttgtcgcgtgtgtgttgctgctgctgctgctgctgctgtccggcttctcccttcattcttgcggcttgaaaagggagaggagggttttagcgttcttggtaggatcaagctctcaggttggatctgagctcgtggttggttgtcttgcggacgtatcatcgtgcctagatattgatttgtttgtgctggtttgggagggttataaggagggtttattgcttttctttcgatcttgtggtatggtagatttagatggggtttctttggttggatttaggtgttgtaagttttatttttgtcatgcttgcttattattatggatggagatggagagagaagcagtaggatgacttccttttagatgtttaataccttgatgcttatcaaacggcttgctgataaacaacatgctagagcagtggttttagtgctagtattatgtctttggctgtcagctcatttgactgttctgcggtagattcgagtcatccccttggtcttgggagttggaattcttataaatgaacggaaaatggaaaaaaaaattgattggtgccacttcaaagttaaatatgccaagacgaattgatatgtttctgctgttgttttatgctcttgattagttgatgcgcatgttcaatgatttatgatgtttgtctttgtggaaagattacatgtaaagagtatagtagaacccctaaaagctagccagcgatttcgctctttttttccaggtctccatgatatgtttacccctaaaagtggtatatttatgtgatagttacaatacatagtggcaccacgattgattatgcgtttatgctgattccggcagaaaattgttagattccttgtgctctatacctgcttgttgcgcttgtagagaatattacaaatacctaacacttgcccaaggaacttaggaacttagtcaactctttgtagggacaactattttagcccaaaattgtggtcttgtcaggtgccaacaaaacagcatcttggcgtacataagctatatagaggattaaaaggaatgttttgttccttgctactgtttttttaacctgtttactcaggacaaattttgttgcataaaccatttgttctagggatcagtattgtcctctcagtgtgttatgtaagcatttccagaaatcaattgtcgctatcagcttccctcacattagctatcacttatacccctttttttctcataggctcaccatgtccattttattcatgatatttctttgtctaaagtatgtgaaataccattttatgcagataggagaagatggccgcacttgataccttcctctttacctcggagtctgtgaacgagggccaccctgacaagctctgcgaccaagtctcagatgctgtgcttgatgcctgcctcgccgaggaccctgacagcaaggtcgcttgtgagacctgcaccaagacaaacatggtcatggtctttggtgagatcaccaccaaggctaacgttgactatgagaagattgtcagggagacatgccgtaacatcggttttgtgtcagctgatgtcggtctcgatgctgaccactgcaaggtgcttgtgaacatcgagcagcagtcccctgacattgcacagggtgtgcacggccacttcaccaagcgccctgaggagattggtgctggtgaccagggacacatgtttggatatgcaactgatgagacccctgagttgatgcccctcagccatgtccttgctaccaagcttggcgctcgtcttacggaggttcgcaagaatgggacctgcgcatggctcaggcctgacgggaagacccaagtgactgttgagtaccgcaatgagagcggtgccagggtccctgtccgtgtccacaccgtcctcatctctacccagcatgatgagacagtcaccaacgatgagattgctgctgacctgaaggagcatgtcatcaagcctgtcattcccgagcagtaccttgatgagaagacaatcttccatcttaacccatctggtcgcttcgtcattggcggacctcatggtgatgctggtctcactggccggaagatcatcattgacacttatggtggctggggagctcacggtggtggtgccttctctggcaaggacccaaccaaggttgaccgcagtggagcatacgtcgcaaggcaagctgccaagagcattgttgctagtggccttgctcgccgctgcattgtccaagtatcatacgccatcggtgtcccagagccactgtccgtattcgtcgacacatacggcactggcaggatccctgacaaggagatcctcaagattgtgaaggagaacttcgacttcaggcctggcatgatcatcatcaaccttgacctcaagaaaggcggcaacggacgctacctcaagacggcggcttacggtcacttcggaagggacgacccagacttcacctgggaggtggtgaagcccctcaagtgggagaagccttctgcctaaaagctccctttcggaggcttttgctctgtcccattatggtgttttgtttcctcgctgctcagcattgtgattcttaacctgccccccgctgccatttatgcccatgcacgctactttcctaataataagtacttataagggtattgtgtttgaatattttacctagaggaggaggaggatttgttatctgttattgcttaagcttatgtaatggtgaaagaaggaaagatgctacactactttgagaagaagaaatgaaacctcctatgttttggt</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061110.1 RefSeq:Os05g0135700]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 5]]~~
−	~~[[Category:~~Chromosome 5]]

← Older revision		Revision as of 20:03, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os05g0135700\|		GeneName = Os05g0135700\|