Os05g0480000 - Revision history

Xysj1987: /* Annotated Information */

2016-10-09T09:27:08Z

‎Annotated Information

Xysj1987: /* Phenotypic analysis */

2016-10-09T09:24:58Z

‎Phenotypic analysis

Xysj1987: /* References */

2016-10-09T09:22:46Z

‎References

Xysj1987: /* Expression */

2016-10-09T09:21:32Z

‎Expression

Xysj1987 at 09:20, 9 October 2016

2016-10-09T09:20:08Z

192.168.72.52 at 08:33, 14 May 2015

2015-05-14T08:33:10Z

124.16.129.48 at 20:12, 22 July 2012

2012-07-22T20:12:07Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os05g0480000| Description = Protein kinase domain containing protein| Version = NM_001062386.1 GI:115464502 GeneID:4339115| Length = 2109 bp| D..."

2012-06-24T10:26:04Z

Created page with "{{JaponicaGene| GeneName = Os05g0480000| Description = Protein kinase domain containing protein| Version = NM_001062386.1 GI:115464502 GeneID:4339115| Length = 2109 bp| D..."

New page

{{JaponicaGene|
GeneName = Os05g0480000|
Description = Protein kinase domain containing protein|
Version = NM_001062386.1 GI:115464502 GeneID:4339115|
Length = 2109 bp|
Definition = Oryza sativa Japonica Group Os05g0480000, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
AP = Chromosome 5:23646198..23648306|
CDS = 23647131..23647511,23647613..23647960|
GCID = <gbrowseImage1>
name=NC_008398:23646198..23648306
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008398:23646198..23648306
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgagcgaccgcaacttccccttcaacctggagggcctcatgttcgggcgcgccgtgcgggggctcgacgacggcagccgcgccgcgctggtggtgaagcaggtgatgcggcagctggtgacctccctgaagcgcatccacggcaccggcatcgtccaccgcgacatcaagccgtccaacctcgtcgtcacccggcgggggcaggtgaagctcatcgacttcggcgccgccaccgacctccgcatcggcaagaactacgtccccgaccgcgccctcctcgacccggactactgcccgcctgagctctacgtcctccccgaggagacgccccagccgcccgccgagcccatcgccgccatcctctccccgatcctctggcagattaacagcccggacctgttcgacatgtactcggcggggatcgtgctgatgcagatggcgtcgccgatgctgaggtcgccgtcggggctcaagaacttcaacgccgagctcaaggccgccgggtacgacctcaaccggtggcgggagaccacgcggcggagacccgacctgcagatcctcgacctcgactccggcagggggtgggacctcgccaccaagctcatctcgcagcgcggcgccgacaagcgcggccgcctcaccgccgccgccgccctgcgccacccttacttcctcctcggcggcgaccaggccgccgccgtcttgtccaagctgtcactcagcaagtag</cdnaseq>|
AA = <aaseq>MSDRNFPFNLEGLMFGRAVRGLDDGSRAALVVKQVMRQLVTSLK RIHGTGIVHRDIKPSNLVVTRRGQVKLIDFGAATDLRIGKNYVPDRALLDPDYCPPEL YVLPEETPQPPAEPIAAILSPILWQINSPDLFDMYSAGIVLMQMASPMLRSPSGLKNF NAELKAAGYDLNRWRETTRRRPDLQILDLDSGRGWDLATKLISQRGADKRGRLTAAAA LRHPYFLLGGDQAAAVLSKLSLSK</aaseq>|
DNA = <dnaseqindica>934..1314#1416..1763#agctggacgagaggtacaaggagaaggtgatactgaagaagatcaaggtggggacggcgggggcgaaggagtgcggcgactacgaggagtggttcaactaccgggtggcaagggcggcgccggagtcgtgcgccgagttcctcggcagcttcgtcgccgacaagaccaagtccgagttcgtcaagggcggcaaatggctcgtctggaaattcgaggtaaattcgacatcaactcatcagttaatgcttgatgctagtatgaactgctgcaaccacatgcagcacagaaaattagtagtagtaacaacaattttaggaatcactaagctttttttttttttacgcaaaaaggtagagagtctctatcttatattccattatagaaatggcggtcaaagtacatggccaaatggccaaagaaaggtaaaaggaatacagaaaaaaggttacactggaaatggaagaaggagaaaggaatcactaagctagcttatagcatgcaaaaatctcaacagcctttaaactttaaacccaaaatttgaactgcttttatattttaaactcggtaatatgaagttttcaagctttttaaacgcaaatgagacataatccactctgtgatacaaaactttgaaagaatcaccaagcttacactacgcaaaaaagttcaataactttgtgatacaaaattttcaagtttttaagcccaaatgattcaaaaaattaaacccaaacgaaatgcaatatgattaaaaaaaagataaattggcccatgcaggtctcgaacctgcgaccttcgcgttattagcacgacgctctaaccagctgagctaataggccttgttcttttatatttgaaaaaaaacattcaaattttttaaacatgatttctggcgcgaattcatggcagggtgaccggacgctgggcaactacatgagcgaccgcaacttccccttcaacctggagggcctcatgttcgggcgcgccgtgcgggggctcgacgacggcagccgcgccgcgctggtggtgaagcaggtgatgcggcagctggtgacctccctgaagcgcatccacggcaccggcatcgtccaccgcgacatcaagccgtccaacctcgtcgtcacccggcgggggcaggtgaagctcatcgacttcggcgccgccaccgacctccgcatcggcaagaactacgtccccgaccgcgccctcctcgacccggactactgcccgcctgagctctacgtcctccccgaggagacgccccagccgcccgccgagcccatcgccgccatcctctccccgatcctctggcaggtgtcgaacacctcacaccttcttcttcttcttcctctccgttcaatcttgcgccgccgtcgatcaccgtcgtcgcgttgctgtttcttggctgaatgcagattaacagcccggacctgttcgacatgtactcggcggggatcgtgctgatgcagatggcgtcgccgatgctgaggtcgccgtcggggctcaagaacttcaacgccgagctcaaggccgccgggtacgacctcaaccggtggcgggagaccacgcggcggagacccgacctgcagatcctcgacctcgactccggcagggggtgggacctcgccaccaagctcatctcgcagcgcggcgccgacaagcgcggccgcctcaccgccgccgccgccctgcgccacccttacttcctcctcggcggcgaccaggccgccgccgtcttgtccaagctgtcactcagcaagtaggttatacaaaacaactcaatgcacaaaattaagaacacatgcagtgatcaggtcaccactcaccaatggcattagcatttttgtttatgatccattggagagatcaagaactcaagattgatccaagagagagggaaaaggaggaggaagaaacaatatggtaatatataattacattgttttgtatgaggttaatcactttgaacagtgcggtgcagagtttgcagacactagctaacttaacttaattactgcccgtattcggactgaactctactgagaaatccctacttctgttggtcagcttcttgcaacctatgtagatttctgaactgtttcttcagcc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062386.1 RefSeq:Os05g0480000]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Gene Symbol===
 *'''''Os05g0480000''''' '''<=>''' '''''OsSTN8,STN8'''''

@@ Line 10: / Line 10: @@
 * The growth of osstn8 mutants was slower than that of WT (Figure S3a,c), and the growth retardation resulted in a flowering delay of approximately 7–10 days (Figure S3b).
 * The contents of photosynthetic pigments were not significantly altered in osstn8 mutants compared with WT, but the chlorophyll a/b ratio was 3.2 in WT and 3.0 in osstn8 mutant leaves.
 ===Expression===
 * The expression pattern of '''''OsSTN8''''' was determined by real-time PCR analysis (Figure 1d). '''''OsSTN8''''' was found to be highly expressed in leaves (photosynthetic organ).

@@ Line 26: / Line 26: @@
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]

@@ Line 11: / Line 11: @@
 * The contents of photosynthetic pigments were not significantly altered in osstn8 mutants compared with WT, but the chlorophyll a/b ratio was 3.2 in WT and 3.0 in osstn8 mutant leaves.
 ===Expression===
-* The expression pattern of OsSTN8 was determined by real-time PCR analysis (Figure 1d). OsSTN8 was found to be highly expressed in leaves (photosynthetic organ).
+* The expression pattern of '''''OsSTN8''''' was determined by real-time PCR analysis (Figure 1d). '''''OsSTN8''''' was found to be highly expressed in leaves (photosynthetic organ).
-* Its expression was much lower in roots, flowers and immature seeds.
 You can also add sub-section(s) at will.

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os05g0480000''''' was reported as '''''OsSTN8''''' in 2013 <ref name="ref1" /> by researchers from Korea, Mongolia, Russia.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* STN8 kinase is involved in photosystem II (PSII) core protein phosphorylation (PCPP).
+* Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice.
 ===Expression===
-Please input expression information here.
+* The expression pattern of OsSTN8 was determined by real-time PCR analysis (Figure 1d). OsSTN8 was found to be highly expressed in leaves (photosynthetic organ).
+* Its expression was much lower in roots, flowers and immature seeds.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* Department of Molecular Biology, Pusan National University, Busan 609–735, Korea
 ==References==

← Older revision		Revision as of 08:33, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
−	~~GeneName = Os05g0480000\|~~
−	~~Description = Protein kinase domain containing protein\|~~
−	~~Version = NM_001062386.1 GI:115464502 GeneID:4339115\|~~
−	~~Length = 2109 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os05g0480000, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 5\|Chromosome 5]]\|~~
−	~~AP = Chromosome 5:23646198..23648306\|~~
−	~~CDS = 23647131..23647511,23647613..23647960\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008398:23646198..23648306~~
−	~~source=RiceChromosome05~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008398:23646198..23648306~~
−	~~source=RiceChromosome05~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgagcgaccgcaacttccccttcaacctggagggcctcatgttcgggcgcgccgtgcgggggctcgacgacggcagccgcgccgcgctggtggtgaagcaggtgatgcggcagctggtgacctccctgaagcgcatccacggcaccggcatcgtccaccgcgacatcaagccgtccaacctcgtcgtcacccggcgggggcaggtgaagctcatcgacttcggcgccgccaccgacctccgcatcggcaagaactacgtccccgaccgcgccctcctcgacccggactactgcccgcctgagctctacgtcctccccgaggagacgccccagccgcccgccgagcccatcgccgccatcctctccccgatcctctggcagattaacagcccggacctgttcgacatgtactcggcggggatcgtgctgatgcagatggcgtcgccgatgctgaggtcgccgtcggggctcaagaacttcaacgccgagctcaaggccgccgggtacgacctcaaccggtggcgggagaccacgcggcggagacccgacctgcagatcctcgacctcgactccggcagggggtgggacctcgccaccaagctcatctcgcagcgcggcgccgacaagcgcggccgcctcaccgccgccgccgccctgcgccacccttacttcctcctcggcggcgaccaggccgccgccgtcttgtccaagctgtcactcagcaagtag</cdnaseq>\|
−	AA = <aaseq>MSDRNFPFNLEGLMFGRAVRGLDDGSRAALVVKQVMRQLVTSLK RIHGTGIVHRDIKPSNLVVTRRGQVKLIDFGAATDLRIGKNYVPDRALLDPDYCPPEL YVLPEETPQPPAEPIAAILSPILWQINSPDLFDMYSAGIVLMQMASPMLRSPSGLKNF NAELKAAGYDLNRWRETTRRRPDLQILDLDSGRGWDLATKLISQRGADKRGRLTAAAA LRHPYFLLGGDQAAAVLSKLSLSK</aaseq>\|
−	DNA = <dnaseqindica>934..1314#1416..1763#agctggacgagaggtacaaggagaaggtgatactgaagaagatcaaggtggggacggcgggggcgaaggagtgcggcgactacgaggagtggttcaactaccgggtggcaagggcggcgccggagtcgtgcgccgagttcctcggcagcttcgtcgccgacaagaccaagtccgagttcgtcaagggcggcaaatggctcgtctggaaattcgaggtaaattcgacatcaactcatcagttaatgcttgatgctagtatgaactgctgcaaccacatgcagcacagaaaattagtagtagtaacaacaattttaggaatcactaagctttttttttttttacgcaaaaaggtagagagtctctatcttatattccattatagaaatggcggtcaaagtacatggccaaatggccaaagaaaggtaaaaggaatacagaaaaaaggttacactggaaatggaagaaggagaaaggaatcactaagctagcttatagcatgcaaaaatctcaacagcctttaaactttaaacccaaaatttgaactgcttttatattttaaactcggtaatatgaagttttcaagctttttaaacgcaaatgagacataatccactctgtgatacaaaactttgaaagaatcaccaagcttacactacgcaaaaaagttcaataactttgtgatacaaaattttcaagtttttaagcccaaatgattcaaaaaattaaacccaaacgaaatgcaatatgattaaaaaaaagataaattggcccatgcaggtctcgaacctgcgaccttcgcgttattagcacgacgctctaaccagctgagctaataggccttgttcttttatatttgaaaaaaaacattcaaattttttaaacatgatttctggcgcgaattcatggcagggtgaccggacgctgggcaactacatgagcgaccgcaacttccccttcaacctggagggcctcatgttcgggcgcgccgtgcgggggctcgacgacggcagccgcgccgcgctggtggtgaagcaggtgatgcggcagctggtgacctccctgaagcgcatccacggcaccggcatcgtccaccgcgacatcaagccgtccaacctcgtcgtcacccggcgggggcaggtgaagctcatcgacttcggcgccgccaccgacctccgcatcggcaagaactacgtccccgaccgcgccctcctcgacccggactactgcccgcctgagctctacgtcctccccgaggagacgccccagccgcccgccgagcccatcgccgccatcctctccccgatcctctggcaggtgtcgaacacctcacaccttcttcttcttcttcctctccgttcaatcttgcgccgccgtcgatcaccgtcgtcgcgttgctgtttcttggctgaatgcagattaacagcccggacctgttcgacatgtactcggcggggatcgtgctgatgcagatggcgtcgccgatgctgaggtcgccgtcggggctcaagaacttcaacgccgagctcaaggccgccgggtacgacctcaaccggtggcgggagaccacgcggcggagacccgacctgcagatcctcgacctcgactccggcagggggtgggacctcgccaccaagctcatctcgcagcgcggcgccgacaagcgcggccgcctcaccgccgccgccgccctgcgccacccttacttcctcctcggcggcgaccaggccgccgccgtcttgtccaagctgtcactcagcaagtaggttatacaaaacaactcaatgcacaaaattaagaacacatgcagtgatcaggtcaccactcaccaatggcattagcatttttgtttatgatccattggagagatcaagaactcaagattgatccaagagagagggaaaaggaggaggaagaaacaatatggtaatatataattacattgttttgtatgaggttaatcactttgaacagtgcggtgcagagtttgcagacactagctaacttaacttaattactgcccgtattcggactgaactctactgagaaatccctacttctgttggtcagcttcttgcaacctatgtagatttctgaactgtttcttcagcc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062386.1 RefSeq:Os05g0480000]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 5]]~~
−	~~[[Category:~~Chromosome 5]]

← Older revision		Revision as of 20:12, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os05g0480000\|		GeneName = Os05g0480000\|