Os05g0530400 - Revision history

192.168.72.52: /* Structured Information */

2015-06-12T07:42:50Z

‎Structured Information

Chenxi: /* Evolution */

2014-06-10T11:31:43Z

‎Evolution

Chenxi: /* Labs working on this gene */

2014-06-10T11:05:21Z

‎Labs working on this gene

Chenxi: /* Expression */ Spl7 mutants formed small, reddish brown necrotic lesions; formation was enhanced by high temperature and suppressed by UV interception.

2014-06-09T15:16:33Z

‎Expression: Spl7 mutants formed small, reddish brown necrotic lesions; formation was enhanced by high temperature and suppressed by UV interception.

Chenxi: /* Function */ encode heat stress transcription factor/make plants tolerant to cell death/

2014-06-09T14:54:42Z

‎Function: encode heat stress transcription factor/make plants tolerant to cell death/

124.16.129.48 at 20:13, 22 July 2012

2012-07-22T20:13:43Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os05g0530400| Description = Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10)| Version = NM_0010..."

2012-06-24T10:30:35Z

Created page with "{{JaponicaGene| GeneName = Os05g0530400| Description = Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10)| Version = NM_0010..."

New page

{{JaponicaGene|
GeneName = Os05g0530400|
Description = Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10)|
Version = NM_001062662.1 GI:115465054 GeneID:4339409|
Length = 2463 bp|
Definition = Oryza sativa Japonica Group Os05g0530400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
AP = Chromosome 5:26405672..26408134|
CDS = 26406272..26406508,26406746..26407888|
GCID = <gbrowseImage1>
name=NC_008398:26405672..26408134
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008398:26405672..26408134
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggagagttccaacctgggcggcggcggcggcggaggcggcggcggtgggccgccgccgttcttgatcaagacgtacgagatggtggaggacgcggcgaccaaccacgtcgtgtcgtggggccccggcggcgccagcttcgtcgtgtggaacccgctcgacttctcccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacggtttccgaaaaatcgatcctgagagatgggagttcgcaaacgaggatttcataagagggcacacgcaccttctgaagaacatccatcgacgcaagcccgtgcacagccactccctccagaaccagataaacggaccactcgccgaatcggagaggcgcgagctcgaagaagagatcaaccggctcaagtacgagaagagcatcctcgtcgcggacctccagaggcagaaccagcagcagtacgtgatcaactggcagatgcaggcgatggaaggcaggctagtggcgatggagcaacggcagaagaacatcgtggcctccctgtgcgagatgctgcagagacgcggtggcgccgtgtcgagctcgctgctggagtccgaccatttcagcaagaagaggagggtcccgaagatggatctcttcgtcgacgattgcgcggcgggcgaagaacagaaggtgttccagttccagggaattgggacggatgcaccggccatgcctcccgtgcttcctgtgaccaatggtgaggcttttgacagggttgagctgagcctggtctccctggagaaactcttccagagagcaaatgatgcttgcacagctgctgaagaaatgtactcccatggtcatggtggtactgaacccagcactgctatatgtcctgaagagatgaacactgctccaatggagacaggcatcgatcttcagttaccagctagcctccatcccagctcacccaacacagggaatgcccatctccatttatccactgaactcacagagtctccaggttttgtgcagagtccagagctgccaatggcagagattcgtgaagatatccatgtgacaagatacccaacacaagctgatgtaaattctgagattgcctcctccactgatacttcacaagatggcacgtcagaaactgaagcttcgcatggaccgaccaacgatgtgttttgggagcggttcctcacagagactccacggtcatgtttggatgagtcagaaagacaagagtctcccaaggacgatgtaaaagcagaattaggctgcaatggcttccatcaccgggagaaggttgatcagatcaccgagcaaatggggcaccttgcttcagccgagcagactctgcatacctga</cdnaseq>|
AA = <aaseq>MESSNLGGGGGGGGGGGPPPFLIKTYEMVEDAATNHVVSWGPGG ASFVVWNPLDFSRDLLPKYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFIRGHTH LLKNIHRRKPVHSHSLQNQINGPLAESERRELEEEINRLKYEKSILVADLQRQNQQQY VINWQMQAMEGRLVAMEQRQKNIVASLCEMLQRRGGAVSSSLLESDHFSKKRRVPKMD LFVDDCAAGEEQKVFQFQGIGTDAPAMPPVLPVTNGEAFDRVELSLVSLEKLFQRAND ACTAAEEMYSHGHGGTEPSTAICPEEMNTAPMETGIDLQLPASLHPSSPNTGNAHLHL STELTESPGFVQSPELPMAEIREDIHVTRYPTQADVNSEIASSTDTSQDGTSETEASH GPTNDVFWERFLTETPRSCLDESERQESPKDDVKAELGCNGFHHREKVDQITEQMGHL ASAEQTLHT</aaseq>|
DNA = <dnaseqindica>601..837#1075..2217#cgccctgcacccgttgccaccaccaccgccttctccgccgcgccgcctcctctcgcgtctcccgctcgtgcagggcgcgcgtcgtcgggcgagctgctgccgtctccgtggccgtggctgatcaggtgagaattgagaaaggttgtgagttttcgcgtggttgtctggttgattcgatcgtgccggcgcgccttggcatggcaggcaagattgtatcaggagataatgaaaaaacatacactgggctttctttttcttaatttctttgcattctttgcttcgacggctatggttgcttgaactgttcaggcggcgcctttgtgtatacacgtgcttgtatgtgatgctctggtcatttctttttgcagaactagttggcgttcgatcggaaagtcgctgtcttttggcgactcggtgagaatttgcgccgcggttcaatgtgaaaaattttggcccgtggcgagttggatttggcgccgagtccattcaggtggttaagacttgttcgtgggagagcgaagctgcgcgcgttaagaccgggctccgttcttgcatcgtgcagagcagctgctggtttgagaattgagaggcgcggttgacatggagagttccaacctgggcggcggcggcggcggaggcggcggcggtgggccgccgccgttcttgatcaagacgtacgagatggtggaggacgcggcgaccaaccacgtcgtgtcgtggggccccggcggcgccagcttcgtcgtgtggaacccgctcgacttctcccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacgtgagtcacaaacacaatcccctttgcttcttgaaacgaaacaaacattgcaacaatcatgtgctactgtttgcttgtaaattagtagttccttgttcttggtttgtttggatgattttaccattgacacagcagccggttttatatagcctatttgattttctgtaaaatagttctttattcttggttggtttgaccgtagctgaattttgacttcaattggcatcttcctttcagggtttccgaaaaatcgatcctgagagatgggagttcgcaaacgaggatttcataagagggcacacgcaccttctgaagaacatccatcgacgcaagcccgtgcacagccactccctccagaaccagataaacggaccactcgccgaatcggagaggcgcgagctcgaagaagagatcaaccggctcaagtacgagaagagcatcctcgtcgcggacctccagaggcagaaccagcagcagtacgtgatcaactggcagatgcaggcgatggaaggcaggctagtggcgatggagcaacggcagaagaacatcgtggcctccctgtgcgagatgctgcagagacgcggtggcgccgtgtcgagctcgctgctggagtccgaccatttcagcaagaagaggagggtcccgaagatggatctcttcgtcgacgattgcgcggcgggcgaagaacagaaggtgttccagttccagggaattgggacggatgcaccggccatgcctcccgtgcttcctgtgaccaatggtgaggcttttgacagggttgagctgagcctggtctccctggagaaactcttccagagagcaaatgatgcttgcacagctgctgaagaaatgtactcccatggtcatggtggtactgaacccagcactgctatatgtcctgaagagatgaacactgctccaatggagacaggcatcgatcttcagttaccagctagcctccatcccagctcacccaacacagggaatgcccatctccatttatccactgaactcacagagtctccaggttttgtgcagagtccagagctgccaatggcagagattcgtgaagatatccatgtgacaagatacccaacacaagctgatgtaaattctgagattgcctcctccactgatacttcacaagatggcacgtcagaaactgaagcttcgcatggaccgaccaacgatgtgttttgggagcggttcctcacagagactccacggtcatgtttggatgagtcagaaagacaagagtctcccaaggacgatgtaaaagcagaattaggctgcaatggcttccatcaccgggagaaggttgatcagatcaccgagcaaatggggcaccttgcttcagccgagcagactctgcatacctgatgcagtaataccatttgcgcggattcatagttcgtgtgtaaattagcgaagatgtaaattatagcttagatcggattagaggcttgcgtgttactttacagatttcaaccttttattagattacaataggtctttcacaatttatgattctgttctatccgctgactactgtgcataaattttttttagtagaccatatccatttttgtactccattgcccttctaagattcctcgttaaaatctc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062662.1 RefSeq:Os05g0530400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

← Older revision		Revision as of 11:31, 10 June 2014
Line 19:		Line 19:

	You can also add sub-section(s) at will.		You can also add sub-section(s) at will.
		+	In adult plants, spl7 mutants formed small, reddish brown necrotic lesions; formation was enhanced by high temperature and suppressed by UV interception. Cells in adult leaves accumulate various stresses but are usually prevented from dying by cell survival factors, e.g., HSPs. Spl7, a rice HSFA4, may control such cell survival factors. HSFs play a central role in the transmission of information regarding environmental stress to the nucleus, where the binding of activated HSFs to heat shock elements in promoters of HSP genes results in the transcriptional induction of the heat stress response. Genes for HSFs have been isolated and characterized from yeast, Drosophila, and some vertebrates. In plants, they have been reported in tomato, Arabidopsis, soybean, maize , and others. All HSF proteins have an evolutionarily conserved core consisting of a DBD and an oligomerization domain, HR-A�B. HSFs are multigene families in both plants and vertebrates. On the basis of phylogeny of DBDs and organization of HRs, plant HSFs can be subdivided into three major classes: A, B, and C. Spl7 seems to be a plant class A HSF. We used three main criteria for the classification: (i) Spl7 has a class A-specific insertion of 21 a residues between HR-A and HR-B. (ii) Spl7 has an NLS located adjacent to the HR-A�B region. In class B HSFs, the NLS is located more distally, close to the C terminus.(iii) Spl7 has an HR-C and an AHA which are absent from class B HSFs. Parsimony analysis of DBDs shows that Spl7 is a class A4 HSF. At present, five HSFs (two from Arabidopsis, one each from tobacco, maize, and have been classified into class A4; of these, At HSF21 and ZmHSFb are heat-inducible, likeSpl7. The biological function of class A4 HSFs in plants remains to be shown.

	==Labs working on this gene==		==Labs working on this gene==

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 ==Labs working on this gene==
 Please input related labs here.
 ==References==

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 ===Expression===
 Please input expression information here.
 ===Evolution===

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 ===Function===
 Please input function information here.
 ===Expression===

← Older revision		Revision as of 20:13, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os05g0530400\|		GeneName = Os05g0530400\|

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]