Os05g0574500 - Revision history

Xysj2019 at 11:05, 2 March 2017

2017-03-02T11:05:09Z

Xysj2017: /* Knowledge Extension */

2017-02-15T00:52:10Z

‎Knowledge Extension

192.168.72.52: /* Structured Information */

2015-06-12T07:45:32Z

‎Structured Information

Zhangye at 15:43, 28 January 2015

2015-01-28T15:43:01Z

Zhangye at 12:40, 17 January 2015

2015-01-17T12:40:42Z

124.16.129.48 at 20:15, 22 July 2012

2012-07-22T20:15:15Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os05g0574500| Description = Similar to GTP-binding nuclear protein Ran1B (Fragment)| Version = NM_001062925.1 GI:115465580 GeneID:4339683| Lengt..."

2012-06-24T10:35:14Z

Created page with "{{JaponicaGene| GeneName = Os05g0574500| Description = Similar to GTP-binding nuclear protein Ran1B (Fragment)| Version = NM_001062925.1 GI:115465580 GeneID:4339683| Lengt..."

New page

{{JaponicaGene|
GeneName = Os05g0574500|
Description = Similar to GTP-binding nuclear protein Ran1B (Fragment)|
Version = NM_001062925.1 GI:115465580 GeneID:4339683|
Length = 2248 bp|
Definition = Oryza sativa Japonica Group Os05g0574500, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
AP = Chromosome 5:28704072..28706319|
CDS = 28704342..28704411,28704510..28704587,28704695..28704874,28704957..28705046,28705164..28705281<br>,28705367..28705423,28706061..28706130,28706223..28706225|
GCID = <gbrowseImage1>
name=NC_008398:28704072..28706319
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008398:28704072..28706319
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgctgccgaatcaggggaccgtggattaccccagcttcaagctggtcatcgtcggcgatggcgggactggtaaaactacatttgtgaagaggcatctcactggagagtttgaaaagaaatatgagccaaccattggtgtcgaagttcaccctctagattttaccaccaactgtggtaagatccgcttctactgctgggacactgctggacaagagaagtttggtggacttagggatggatactatatccatggtcaatgtgcgataattatgtttgatgtcacttcaaggctgacttacaagaatgttccaacatggcatagggacttgtgcagggtgtgtgaaaacatccccattgtcctgtgtggtaacaaggttgatgtgaagaacaggcaggttaaagccaagcaggtcacattccacaggaagaagaatctccagtactatgaaatttctgccaagagcaactacaactttgagaagcccttcctttatcttgcaaggaagcttgctggtgacccgaacctgcatttcgttgaagctgttgctcttaaacctccggaagttcccattgacctggcaatgcagcaacagcatgaggctgagcttgcggctgcagcagcacaacctctcccagatgacgatgacgatctgatcgagtag</cdnaseq>|
AA = <aaseq>MALPNQGTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP TIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYK NVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNF EKPFLYLARKLAGDPNLHFVEAVALKPPEVPIDLAMQQQHEAELAAAAAQPLPDDDDD LIE</aaseq>|
DNA = <dnaseqindica>1909..1978#1733..1810#1446..1625#1274..1363#1039..1156#897..953#190..259#95..97#attccatttcgaattctagggttttgttggcccccattcctcccccaccccggtgtcctcccctccgccgctcgcgtcgccgcctttttcccctatggtgagtacgatctcgatttcgccgcgccgtgtgggtttggatctcggggttcctgtgtttgatccgcgacgttttttggcttttttttccaggcgctgccgaatcaggggaccgtggattaccccagcttcaagctggtcatcgtcggcgatggcgggactggtgagttcccaatctcgattcggatcctattccgttctgaaacggcatgttatgatatgtttgatgcgtctactcggtgtggtttctactagatctgatgggctaagatttgtaccggtggctgaaatccgatggatttttttttatttcgccattagactgggatttgggtattggatgtttccattttatgattcagcttatcccagggatgggttattgctctatttttatatgacgtctaaaattttgctactcctatcttgatgattaggatcttgagagttattttaggatattgaaatcggcataaatatgatgctatacaggtcgtatttagtcagatgtatttattatcttattttagaatggaccatcgtgctatgctgttattctaggattcgcctgggactgaataaatttgaggaaaaagtaaaatagtatataaataccttcgcatcagtaaactattgcgctttttgatcagttgagattggtcaaaacattagttgcagtctgattagtttaggccggcaatatgcctgaatggcttcatttccgtaagaaaagtttacttattgccttctatatcattgttattggatggattttgatggtatgccatgtttgattgcaggtaaaactacatttgtgaagaggcatctcactggagagtttgaaaagaaatatgagcgtatgtactatgactcttatttttgttgttcctgtattctttgctaaattagttattgaactgttatgcaaatttgtcacttcagcaaccattggtgtcgaagttcaccctctagattttaccaccaactgtggtaagatccgcttctactgctgggacactgctggacaagagaagtttggtggacttagggatggatactagtaagtgctagagaagtgcttaagccaattatcatagcttcccttaatatttttccatgcatatggatgtctccttgtgcttgcctgattgttctgtccttaacttctgttgtgcagtatccatggtcaatgtgcgataattatgtttgatgtcacttcaaggctgacttacaagaatgttccaacatggcatagggacttgtgcaggtttatttctgaagacacgataaactttacctaatatattatatggaagagaactcttatgattaggtatcaactcttgcagggtgtgtgaaaacatccccattgtcctgtgtggtaacaaggttgatgtgaagaacaggcaggttaaagccaagcaggtcacattccacaggaagaagaatctccagtactatgaaatttctgccaagagcaactacaactttgagaagcccttcctttatcttgcaaggaagcttgctgggtaataattccctccttattgttttccttttcatgctttcttcttacattgtttgtgtttattatgcaacatattttaatctgtgttaatgcttttggtgtatgtagtgacccgaacctgcatttcgttgaagctgttgctcttaaacctccggaagttcccattgacctggcaatgcagcaacagtaagtgtttatgctttgtccaattcattttcagatagtgttgatgaaatacctagtttctgcaaacatttcaggaactaattttaatactcatgcaggcatgaggctgagcttgcggctgcagcagcacaacctctcccagatgacgatgacgatctgatcgagtagagaggatcatgagtctatcatgcttcagcctgagtctcttcataagagtctgaattaggccaatgcatgctagtgttagcttgtctgtggaatgtggacgtttcctgcgtgcctgatgggttgaaaacttttgatgtgtggtgttacatgttgctgccatgaatttgttggctcttttttaacactgctgtgttacttctatggttatgcttaaactatttgtatcatcgagctggtatttatttatccggtgttgcacaatattcttct</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062925.1 RefSeq:Os05g0574500]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Function===
 *''OsRAN2(Os05g0574500)'' negatively responds to abiotic stress stimulus and ''OsRAN2'' overexpression caused transformants hypersensitive to abiotic stress<ref name="ref1"/>.

@@ Line 45: / Line 45: @@
 ===Knowledge Extension===
 [[File: Ran mitosis.jpg|right|thumb|300px|'''Figure 3.''' ''Organization of Ran regulators in mitosis.(from reference <ref name="ref5"/>).'']]
-*The small GTPase Ran has roles in '''nuclear transport''', '''mitotic spindle''' assembly and nuclear envelope assembly. The control of
+*The small GTPase Ran has roles in '''nuclear transport''', '''mitotic spindle''' assembly and nuclear envelope assembly. The control of Ran within the mitotic spindle could be remarkably complex (Figure 3)<ref name="ref5"/>. Near chromosomes, RCC1 generates Ran–GTP that in turn regulates microtubule dynamics. At kinetochores and on spindles, RanGAP mediates Ran–GTP hydrolysis<ref name="ref5"/>.
 *Nucleo-cytoplasmic partitioning of regulatory proteins is increasingly being recognized as a major control mechanism for the regulation of signalling in plants. Ras-related nuclear protein (Ran) GTPase is required for regulating transport of proteins and RNA across the nuclear envelope and also has roles in mitotic spindle assembly and nuclear envelope (NE) assembly. However, thus far little is known of any Ran functions in the signalling pathways in plants in response to changing environmental stimuli<ref name="ref1"/>.

← Older revision		Revision as of 15:43, 28 January 2015
Line 1:		Line 1:
−	'''''OsRAN2''''' is a ~~mumber~~ of '''Ran'''(Ras-related nuclear protein) gene, which is a small nuclear GTP binding protein<ref name="ref1"/><ref name="ref2"/>.	+	'''''OsRAN2''''' is a member of '''Ran'''(Ras-related nuclear protein) gene, which is a small nuclear GTP binding protein<ref name="ref1"/><ref name="ref2"/>.

	==Annotated Information==		==Annotated Information==

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+'''''OsRAN2''''' is a mumber of '''Ran'''(Ras-related nuclear protein) gene, which is a small nuclear GTP binding protein<ref name="ref1"/><ref name="ref2"/>.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+*''OsRAN2(Os05g0574500)'' negatively responds to abiotic stress stimulus and ''OsRAN2'' overexpression caused transformants hypersensitive to abiotic stress<ref name="ref1"/>.
 ===Expression===
-Please input expression information here.
+*Transcription of OsRAN2 was '''reduced''' by '''salt''', '''osmotic''', and '''exogenous abscisic acid (ABA) treatments''', as determined by real-time PCR<ref name="ref1"/>. ''OsRAN2'' predominantly responded to low temperature as compared with salt and drought stress. Expression of ''OsRAN2'' was '''increased''' under '''cold''' treatment, but not during salt and drought stress. The mean root mitotic index was closely related to the expression level of ''OsRAN2''<ref name="ref2"/>.
 ===Evolution===
-Please input evolution information here.
+[[File: Ran GTPase Phylogenetic1.jpg|left|thumb|220px|'''Figure 1.''' ''Phylogenetic analysis of plant Ran GTPase.(from reference <ref name="ref2"/>).'']]
-You can also add sub-section(s) at will.
+*The small GTPase superfamily is divided into the '''five families''' Ras, Rho, Rab, Arf and Ras-like nuclear GTPase (Ran). Ran is an abundant nuclear small GTPase<ref name="ref9"/>
 ==Labs working on this gene==
-Please input related labs here.
+*Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Graduate School of Chinese Academy of Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

← Older revision		Revision as of 20:15, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os05g0574500\|		GeneName = Os05g0574500\|

@@ Line 93: / Line 93: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]