Os05g0595100 - Revision history

Rice999 at 15:58, 15 October 2016

2016-10-15T15:58:55Z

Rice999 at 15:58, 15 October 2016

2016-10-15T15:58:29Z

192.168.72.52 at 08:40, 14 May 2015

2015-05-14T08:40:40Z

124.16.129.48 at 20:15, 22 July 2012

2012-07-22T20:15:59Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os05g0595100| Description = Similar to UDPglucose 4-epimerase-like protein| Version = NM_001063047.1 GI:115465824 GeneID:4339812| Length = 3656 ..."

2012-06-24T10:37:22Z

Created page with "{{JaponicaGene| GeneName = Os05g0595100| Description = Similar to UDPglucose 4-epimerase-like protein| Version = NM_001063047.1 GI:115465824 GeneID:4339812| Length = 3656 ..."

New page

{{JaponicaGene|
GeneName = Os05g0595100|
Description = Similar to UDPglucose 4-epimerase-like protein|
Version = NM_001063047.1 GI:115465824 GeneID:4339812|
Length = 3656 bp|
Definition = Oryza sativa Japonica Group Os05g0595100, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
AP = Chromosome 5:29713586..29717241|
CDS = 29713672..29713866,29714597..29714646,29715200..29715335,29715836..29715937,29716058..29716285<br>,29716365..29716449,29716553..29716635,29716759..29716850,29716953..29717046<br>|
GCID = <gbrowseImage1>
name=NC_008398:29713586..29717241
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008398:29713586..29717241
source=RiceChromosome05
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggtttcggccttgttgcggacgatcctggtgacgggcggcgccggctacatcggcagccacaccgtcctccagcttctccaactcggcttccgcgttgtcgtcctcgacaacctcgacaacgcctccgagctcgccatcctccgcgtcagggaactcgccggacacaacgccaacaacctcgacttccgcaaggttgacctccgcgacaagcaagcgttggaccaaatcttctcctctcaaaggtttgaggctgtcatccattttgccgggctgaaagctgttggcgagagcgtgcagaagcccctgctttactacgacaacaacctcatcggcaccatcactctcctgcaggtcatggccgcacatggctgcaccaagctggtgttctcatcatccgcaactgtctacgggtggcccaaggaggtgccctgcactgaagaatccccactttgtgcaatgaacccctacggcagaacaaagctggtaatcgaagacatgtgccgggatctgcatgcctcagacccaaactggaagatcatactgctccgatacttcaaccctgttggagctcacccaagcgggtacattggtgaggacccctgcggcatcccaaacaacctcatgcccttcgtccagcaggtcgctgttggcaggaggccggcccttaccgtctatggaaccgactacaacaccaaggatggaactggggttcgtgactatatccatgttgttgatctagcggatggtcatatcgccgcgttaaggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacgggtatggatcgccggacagtagcaactga</cdnaseq>|
AA = <aaseq>MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASE LAILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKP LLYYDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRT KLVIEDMCRDLHASDPNWKIILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVG RRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGK GTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCR DLWNWASKNPYGYGSPDSSN</aaseq>|
DNA = <dnaseqindica>87..281#1012..1061#1615..1750#2251..2352#2473..2700#2780..2864#2968..3050#3174..3265#3368..3461#cttccgctctctagctttgctttgcttgcttcatcaaaccccacacacgcacacaacaacaacaagagtaatcaaagtagaagaagatggtttcggccttgttgcggacgatcctggtgacgggcggcgccggctacatcggcagccacaccgtcctccagcttctccaactcggcttccgcgttgtcgtcctcgacaacctcgacaacgcctccgagctcgccatcctccgcgtcagggaactcgccggacacaacgccaacaacctcgacttccgcaaggtcttccttccttccttccttccttacttaattctctctctctctctctctacattagattctgattttgcggttccttttattaatttaacaaaacaaaacaaccattcccatctcgataagcggcgcgcggcgatatatcataacttgtctttttgattagattgaaatgaaatcaattggattggattaatcatctcatctagtcaacatattactagttacttatatctgtattcgggcgacacaaatccaaatagtaactactcctcttcctccttagtaatggaaagttagagttcctacaaatatttttgtttgaattggagttgtagtcgttcgttttcatggggaggcggtcaattgaattgaattgaattgagttggtggagtagtagtggaaatgggaaaaaaaaacccaaggagggagggagggaggcgttggaaggcgccggacgcgttgttcccgcccccctgcttcatttctgttttgatttttcatggccaagcacacaacgcatgcaccacccaccccacatacgttccttctactttctttccacccatatataaaaagatcctttacaatccacatctcaatctcaaatataaataggattattaatactaataagctcattcccctggtgcattgcatactcataaaatttcttgcttaaaggactcaaaatctatcttagactaatataacatataaattattatgcaggttgacctccgcgacaagcaagcgttggaccaaatcttctcctctcaaaggttggttagtcttccttgctccttcaatttgcacttaagtacctacctttaatttgttttcatttttggttagcagcgtgacaccgtaaatttcagcataatatatatacaaactatagctattaaactatttcagcataatttcatcggtcggtcggtcggtcggtcgtttattccatgaatcaaatcaaatcgatcattgtcaaaataattactcctcatcatgtattacaagtattctggacctagctagctgctcagccagcctgccaggtcaagaatctggtgcttggccagtttaatttgcagccgtctatcacgcacggtagctgtcacgctcatagtaccaaccaacgaaccgaaccttccttgtggaattaatgcattactatatatcacaggtgacagtccatcccttttgtacccaaccgcgtagtatactggagtactaataagcaatactatgatgaatgaaatgaagagtagtagtaggtattattatctgttttggcgaagatttgagacggacggacgctggtctgcttggctgcaggtttgaggctgtcatccattttgccgggctgaaagctgttggcgagagcgtgcagaagcccctgctttactacgacaacaacctcatcggcaccatcactctcctgcaggtcatggccgcacatggctgcaccaaggtacagcccccgcaccatttcatttatttttctcccattgttttgctttgcctatatgtatatgcgtgcctcttgctggctttattggttggctggcctggctcttctttgcattgctgggggtcacaggatataccttatgcctttttgcattgctggggaacacaggaacatataccacagattacctacctatcacaaccactctgtgtctgtgtgtgttgtttgccatgcatgatgcacgggaatataaccctcccctcttaaaattgctgcctgcctggtcccactcccagccaagatttttttttttgttctcttcctactgccctctgatttttcttcttcctttcatcttgttttggttggttggttggttctgagcttactctggaggcggcatcgcaacagatttatacttacttaatccactaaaagtaaacatatatgctttagtttttaataatggacataatcataagctattttgctccggccagctggtgttctcatcatccgcaactgtctacgggtggcccaaggaggtgccctgcactgaagaatccccactttgtgcaatgaacccctacggcagaacaaaggtactccagttttttctcttctgttatactatattcagttcaatcatcatgcctaggatcaatcaatcaataaatcctaattaagccaaacaacatatatatgatatgatatgattgcagctggtaatcgaagacatgtgccgggatctgcatgcctcagacccaaactggaagatcatactgctccgatacttcaaccctgttggagctcacccaagcgggtacattggtgaggacccctgcggcatcccaaacaacctcatgcccttcgtccagcaggtcgctgttggcaggaggccggcccttaccgtctatggaaccgactacaacaccaaggatggaactggggtatgtatatgcattattcattcattctcaacaatcagtcgtatatgatttactaattaattttattccttgccggcaggttcgtgactatatccatgttgttgatctagcggatggtcatatcgccgcgttaaggaagctctatgaagattctgatagaataggtatatatgaaccctctcttgttgtgcatccatccacgggacgggacacatgaaaacatcatcatctcataaattaataatttatgtggctatattcttccaggatgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaaggtaaactaacaggacaagtgtacttcctcttaattactataataatcattaattcccaacttgtcctttgcttttgttgatcatatgatgtcgtcctaacaataataatgccaacttgaacagaaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactgaaatggaagtaagtatcaggatatatatatatatatagcatctcacatcatttcatctgtactgtaatgaaatgaaatattaaaatcatcatgtactctcttcacaccagggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacgggtatggatcgccggacagtagcaactgatccagctgaatataggcgtccaatcctccagtagcagcagcagcagcatgacttctatacatatatatatataatcataaagaatgaagaaacaaagaattcggacttgttgagttactactactactactactaatcccatctgatggaccgcattgtatagggggcttgtaggggtccagcagcttcatcatc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063047.1 RefSeq:Os05g0595100]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 5]]
[[Category:Chromosome 5]]

@@ Line 1: / Line 1: @@
 The rice '''''Os05g0595100''''' was reported as '''''OsUGE1''''' in 2014 <ref name="ref1" /> by researchers from Canada.
+===Gene Symbol===
 ==Annotated Information==
 ===Function===

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os05g0595100''''' was reported as '''''OsUGE1''''' in 2014 <ref name="ref1" /> by researchers from Canada.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* '''''OsUGE1''''' plays A potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions.
+* '''''OsUGE1''''' Enzyme has Higher Affinity for UDP-gal in vitro
-===Expression===
+* '''''OsUGE1''''' Plays an Important Role in Carbohydrate Partitioning to the Cell Wall in Rice
-Please input expression information here.
+* '''''OsUGE1'''''-OX Coleoptile Growth in the Presence of Exogenous Supplied Gal
+===Phenotypic analysis===
-===Evolution===
+* The researchers developed transgenic rice plants to constitutively over-express the '''''OsUGE-1''''' gene (OsUGE1-OX1–2). The transgenic rice lines were similar in size to wild-type plants at the vegetative stage and at maturity regardless of the N-level tested.
-Please input evolution information here.
+* However, OsUGE1-OX lines maintained 18–24% more sucrose and 12–22% less cellulose in shoots compared to wild-type when subjected to sub-optimal N-levels. Interestingly, '''''OsUGE1-OX''''' lines maintained proportionally more galactose and glucose in the hemicellulosic polysaccharide profile of plants compared to wild-type plants when grown under low N.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* Department of Biology, College of Science, Sultan Qaboos University, Muscat, Oman, 2 Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]

← Older revision		Revision as of 08:40, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
−	~~GeneName = Os05g0595100\|~~
−	~~Description = Similar to UDPglucose 4-epimerase-like protein\|~~
−	~~Version = NM_001063047.1 GI:115465824 GeneID:4339812\|~~
−	~~Length = 3656 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os05g0595100, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 5\|Chromosome 5]]\|~~
−	~~AP = Chromosome 5:29713586..29717241\|~~
−	~~CDS = 29713672..29713866,29714597..29714646,29715200..29715335,29715836..29715937,29716058..29716285<br>,29716365..29716449,29716553..29716635,29716759..29716850,29716953..29717046<br>\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008398:29713586..29717241~~
−	~~source=RiceChromosome05~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008398:29713586..29717241~~
−	~~source=RiceChromosome05~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggtttcggccttgttgcggacgatcctggtgacgggcggcgccggctacatcggcagccacaccgtcctccagcttctccaactcggcttccgcgttgtcgtcctcgacaacctcgacaacgcctccgagctcgccatcctccgcgtcagggaactcgccggacacaacgccaacaacctcgacttccgcaaggttgacctccgcgacaagcaagcgttggaccaaatcttctcctctcaaaggtttgaggctgtcatccattttgccgggctgaaagctgttggcgagagcgtgcagaagcccctgctttactacgacaacaacctcatcggcaccatcactctcctgcaggtcatggccgcacatggctgcaccaagctggtgttctcatcatccgcaactgtctacgggtggcccaaggaggtgccctgcactgaagaatccccactttgtgcaatgaacccctacggcagaacaaagctggtaatcgaagacatgtgccgggatctgcatgcctcagacccaaactggaagatcatactgctccgatacttcaaccctgttggagctcacccaagcgggtacattggtgaggacccctgcggcatcccaaacaacctcatgcccttcgtccagcaggtcgctgttggcaggaggccggcccttaccgtctatggaaccgactacaacaccaaggatggaactggggttcgtgactatatccatgttgttgatctagcggatggtcatatcgccgcgttaaggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacgggtatggatcgccggacagtagcaactga</cdnaseq>\|
−	AA = <aaseq>MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASE LAILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKP LLYYDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRT KLVIEDMCRDLHASDPNWKIILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVG RRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGK GTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCR DLWNWASKNPYGYGSPDSSN</aaseq>\|
−	DNA = <dnaseqindica>87..281#1012..1061#1615..1750#2251..2352#2473..2700#2780..2864#2968..3050#3174..3265#3368..3461#cttccgctctctagctttgctttgcttgcttcatcaaaccccacacacgcacacaacaacaacaagagtaatcaaagtagaagaagatggtttcggccttgttgcggacgatcctggtgacgggcggcgccggctacatcggcagccacaccgtcctccagcttctccaactcggcttccgcgttgtcgtcctcgacaacctcgacaacgcctccgagctcgccatcctccgcgtcagggaactcgccggacacaacgccaacaacctcgacttccgcaaggtcttccttccttccttccttccttacttaattctctctctctctctctctacattagattctgattttgcggttccttttattaatttaacaaaacaaaacaaccattcccatctcgataagcggcgcgcggcgatatatcataacttgtctttttgattagattgaaatgaaatcaattggattggattaatcatctcatctagtcaacatattactagttacttatatctgtattcgggcgacacaaatccaaatagtaactactcctcttcctccttagtaatggaaagttagagttcctacaaatatttttgtttgaattggagttgtagtcgttcgttttcatggggaggcggtcaattgaattgaattgaattgagttggtggagtagtagtggaaatgggaaaaaaaaacccaaggagggagggagggaggcgttggaaggcgccggacgcgttgttcccgcccccctgcttcatttctgttttgatttttcatggccaagcacacaacgcatgcaccacccaccccacatacgttccttctactttctttccacccatatataaaaagatcctttacaatccacatctcaatctcaaatataaataggattattaatactaataagctcattcccctggtgcattgcatactcataaaatttcttgcttaaaggactcaaaatctatcttagactaatataacatataaattattatgcaggttgacctccgcgacaagcaagcgttggaccaaatcttctcctctcaaaggttggttagtcttccttgctccttcaatttgcacttaagtacctacctttaatttgttttcatttttggttagcagcgtgacaccgtaaatttcagcataatatatatacaaactatagctattaaactatttcagcataatttcatcggtcggtcggtcggtcggtcgtttattccatgaatcaaatcaaatcgatcattgtcaaaataattactcctcatcatgtattacaagtattctggacctagctagctgctcagccagcctgccaggtcaagaatctggtgcttggccagtttaatttgcagccgtctatcacgcacggtagctgtcacgctcatagtaccaaccaacgaaccgaaccttccttgtggaattaatgcattactatatatcacaggtgacagtccatcccttttgtacccaaccgcgtagtatactggagtactaataagcaatactatgatgaatgaaatgaagagtagtagtaggtattattatctgttttggcgaagatttgagacggacggacgctggtctgcttggctgcaggtttgaggctgtcatccattttgccgggctgaaagctgttggcgagagcgtgcagaagcccctgctttactacgacaacaacctcatcggcaccatcactctcctgcaggtcatggccgcacatggctgcaccaaggtacagcccccgcaccatttcatttatttttctcccattgttttgctttgcctatatgtatatgcgtgcctcttgctggctttattggttggctggcctggctcttctttgcattgctgggggtcacaggatataccttatgcctttttgcattgctggggaacacaggaacatataccacagattacctacctatcacaaccactctgtgtctgtgtgtgttgtttgccatgcatgatgcacgggaatataaccctcccctcttaaaattgctgcctgcctggtcccactcccagccaagatttttttttttgttctcttcctactgccctctgatttttcttcttcctttcatcttgttttggttggttggttggttctgagcttactctggaggcggcatcgcaacagatttatacttacttaatccactaaaagtaaacatatatgctttagtttttaataatggacataatcataagctattttgctccggccagctggtgttctcatcatccgcaactgtctacgggtggcccaaggaggtgccctgcactgaagaatccccactttgtgcaatgaacccctacggcagaacaaaggtactccagttttttctcttctgttatactatattcagttcaatcatcatgcctaggatcaatcaatcaataaatcctaattaagccaaacaacatatatatgatatgatatgattgcagctggtaatcgaagacatgtgccgggatctgcatgcctcagacccaaactggaagatcatactgctccgatacttcaaccctgttggagctcacccaagcgggtacattggtgaggacccctgcggcatcccaaacaacctcatgcccttcgtccagcaggtcgctgttggcaggaggccggcccttaccgtctatggaaccgactacaacaccaaggatggaactggggtatgtatatgcattattcattcattctcaacaatcagtcgtatatgatttactaattaattttattccttgccggcaggttcgtgactatatccatgttgttgatctagcggatggtcatatcgccgcgttaaggaagctctatgaagattctgatagaataggtatatatgaaccctctcttgttgtgcatccatccacgggacgggacacatgaaaacatcatcatctcataaattaataatttatgtggctatattcttccaggatgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaaggtaaactaacaggacaagtgtacttcctcttaattactataataatcattaattcccaacttgtcctttgcttttgttgatcatatgatgtcgtcctaacaataataatgccaacttgaacagaaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactgaaatggaagtaagtatcaggatatatatatatatatagcatctcacatcatttcatctgtactgtaatgaaatgaaatattaaaatcatcatgtactctcttcacaccagggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacgggtatggatcgccggacagtagcaactgatccagctgaatataggcgtccaatcctccagtagcagcagcagcagcatgacttctatacatatatatatataatcataaagaatgaagaaacaaagaattcggacttgttgagttactactactactactactaatcccatctgatggaccgcattgtatagggggcttgtaggggtccagcagcttcatcatc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063047.1 RefSeq:Os05g0595100]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 5]]~~
−	~~[[Category:~~Chromosome 5]]

← Older revision		Revision as of 20:15, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os05g0595100\|		GeneName = Os05g0595100\|