Os06g0116400 - Revision history

Liman at 05:32, 10 December 2016

2016-12-10T05:32:57Z

Liman at 05:31, 10 December 2016

2016-12-10T05:31:29Z

Liman at 03:03, 10 December 2016

2016-12-10T03:03:50Z

Liman at 03:03, 10 December 2016

2016-12-10T03:03:36Z

Liman at 13:27, 15 October 2016

2016-10-15T13:27:56Z

192.168.72.52 at 08:44, 14 May 2015

2015-05-14T08:44:41Z

124.16.129.48 at 20:16, 22 July 2012

2012-07-22T20:16:44Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os06g0116400| Description = High-affinity nickel-transporter family protein| Version = NM_001063155.1 GI:115466041 GeneID:4339930| Length = 1467..."

2012-06-24T09:00:49Z

Created page with "{{JaponicaGene| GeneName = Os06g0116400| Description = High-affinity nickel-transporter family protein| Version = NM_001063155.1 GI:115466041 GeneID:4339930| Length = 1467..."

New page

{{JaponicaGene|
GeneName = Os06g0116400|
Description = High-affinity nickel-transporter family protein|
Version = NM_001063155.1 GI:115466041 GeneID:4339930|
Length = 1467 bp|
Definition = Oryza sativa Japonica Group Os06g0116400, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
AP = Chromosome 6:907857..909323|
CDS = 907995..908813,909002..909286|
GCID = <gbrowseImage1>
name=NC_008399:907857..909323
source=RiceChromosome06
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008399:907857..909323
source=RiceChromosome06
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcaatggagaggcttatctcttcgccgctcctcccgcgccggcctccccgcgccgccttctcccgcccgccgccctccctcgccgccgcgccaccccaccaccgcgccggcggtgcggcctccgggtacggctccaggccgcctctcgcctcgctcctcctctccaggcaccaccaccaccaccagcctccggtcctcgcggccaatcctgctgccgatgtggccgccggcgaggctgtccctcccgccaccgccaccgccagccggcgcttcctccagaaggtggcgtcggctgcggctgccactctgttggcgacgattgcactgacgctgatccagccggcgtgggcgccgccggcgttggcgtcgttccactcggcggcgaaggcgggaggtggcatcttcaagtcggagctgctcagcagcgcgtggacggggttcctggccggctgcctgcacacgctctccgggccggaccacctcgccgcgctggcgccgctgtccatcgggaggtcgcgggtggagagcgccgccgtgggcgcgctctggggctgcggccacgacgccggccaggtcatcttcggcctcctgttcctcagcctcaaggaccgcctccacatcgaggtcatccgaacgtgggggacccgcgtcgtcggcctcacgctgctcgtcatcggcgccctcggcatcagggaggccaccgaggtgcccacgccgtgcgtcgcgctggagaacggcggcggcggcggcggcgcgcaccgtggcccgctcgatgctctaccagccaccaggaagaagatcaccttcgccacgttcgccaccgggatcgtgcacgggctgcagcccgacgcgctcatgatggtcctgccggcgctcgccctcccgtcgcgcgtcgccggcgcggcgttccttggcatgttcctcgtcggcaccgtggtcgccatgggcagctacaccgtcctgatcggctcttgtacggaggcgctcaaggagagggttcccaggatcacggagaagctgacatgggctgcctcgctcgtggccatctccatgggcctcggcatcctcatcagccagtctctcggctttagcttgtactga</cdnaseq>|
AA = <aaseq>MAMERLISSPLLPRRPPRAAFSRPPPSLAAAPPHHRAGGAASGY GSRPPLASLLLSRHHHHHQPPVLAANPAADVAAGEAVPPATATASRRFLQKVASAAAA TLLATIALTLIQPAWAPPALASFHSAAKAGGGIFKSELLSSAWTGFLAGCLHTLSGPD HLAALAPLSIGRSRVESAAVGALWGCGHDAGQVIFGLLFLSLKDRLHIEVIRTWGTRV VGLTLLVIGALGIREATEVPTPCVALENGGGGGGAHRGPLDALPATRKKITFATFATG IVHGLQPDALMMVLPALALPSRVAGAAFLGMFLVGTVVAMGSYTVLIGSCTEALKERV PRITEKLTWAASLVAISMGLGILISQSLGFSLY</aaseq>|
DNA = <dnaseqindica>511..1329#38..322#ctcccgagacgaaccacccgaagccgcagcagcagcgatggcaatggagaggcttatctcttcgccgctcctcccgcgccggcctccccgcgccgccttctcccgcccgccgccctccctcgccgccgcgccaccccaccaccgcgccggcggtgcggcctccgggtacggctccaggccgcctctcgcctcgctcctcctctccaggcaccaccaccaccaccagcctccggtcctcgcggccaatcctgctgccgatgtggccgccggcgaggctgtccctcccgccaccgccaccgccagccggcgcttcctccagaaggtgagcgcctcgttgcccgccagttttccgtgtcgcgcctcactcgttcttgcatgtctcgtgtgatgattactgatgtgaatttcttcttcttcttccaagaattgcttctgttttgtgatgttgttgtggtcggaggagtccaagagttagcggagattattgagctcacgcgtttggtttgacaggtggcgtcggctgcggctgccactctgttggcgacgattgcactgacgctgatccagccggcgtgggcgccgccggcgttggcgtcgttccactcggcggcgaaggcgggaggtggcatcttcaagtcggagctgctcagcagcgcgtggacggggttcctggccggctgcctgcacacgctctccgggccggaccacctcgccgcgctggcgccgctgtccatcgggaggtcgcgggtggagagcgccgccgtgggcgcgctctggggctgcggccacgacgccggccaggtcatcttcggcctcctgttcctcagcctcaaggaccgcctccacatcgaggtcatccgaacgtgggggacccgcgtcgtcggcctcacgctgctcgtcatcggcgccctcggcatcagggaggccaccgaggtgcccacgccgtgcgtcgcgctggagaacggcggcggcggcggcggcgcgcaccgtggcccgctcgatgctctaccagccaccaggaagaagatcaccttcgccacgttcgccaccgggatcgtgcacgggctgcagcccgacgcgctcatgatggtcctgccggcgctcgccctcccgtcgcgcgtcgccggcgcggcgttccttggcatgttcctcgtcggcaccgtggtcgccatgggcagctacaccgtcctgatcggctcttgtacggaggcgctcaaggagagggttcccaggatcacggagaagctgacatgggctgcctcgctcgtggccatctccatgggcctcggcatcctcatcagccagtctctcggctttagcttgtactgatccgccatccctcgcgacacctccttcttcttcttcgccattgttaagcttccactgcctccactgtaggaatctgccatgagaattttgcaaatgttgcttgttgagatccaggagaattcaagtttagttcacaag</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063155.1 RefSeq:Os06g0116400]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 6]]
[[Category:Chromosome 6]]

@@ Line 6: / Line 6: @@
 ===Function===
 * '''''ZN''''' encodes a thylakoid-bound protein which is essential for chloroplast biogenesis during early leaf development.
 * '''''ZN''''' is required for protecting developing chloroplasts, especially during the assembly of thylakoid protein complexes, from incidental light after darkness.
 ===Mutation===
 * '''''zn''''' phenotype is formed by unequal impairment of chloroplast biogenesis before emergence from the leaf sheath under alternate light/dark or high/low temperatures (restrictive), but not under constant light and temperature (permissive) conditions.
 ===Expression ===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* Expression analyses of OsZN showed that it is expressed only in the shoot organs, with the highest levels found in younger leaf tissues, but not in the roots.
 ===Evolution===

@@ Line 7: / Line 7: @@
 ===Function===
 [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''ZN''''' encodes a thylakoid-bound protein which is essential for chloroplast biogenesis during early leaf development.
 ===Mutation===
 [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''zn''''' phenotype is formed by unequal impairment of chloroplast biogenesis before emergence from the leaf sheath under alternate light/dark or high/low temperatures (restrictive), but not under constant light and temperature (permissive) conditions.
 ===Expression ===
 [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]

← Older revision		Revision as of 03:03, 10 December 2016
Line 1:		Line 1:
−	The rice gene Os06g0116400 was reported as '''''ZN''''' in 20<ref name="ref1" /> by researchers from Korea, China and Azerbaijan.	+	The rice gene Os06g0116400 was reported as '''''ZN''''' in 2010<ref name="ref1" /> by researchers from Korea, China and Azerbaijan.

	==Annotated Information==		==Annotated Information==

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os06g0116400 was reported as '''''ZN''''' in 20<ref name="ref1" /> by researchers from Korea, China and Azerbaijan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os06g0116400 <=> ZN, OsZN
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+*Department of Plant Science, Plant Genomics and Breeding Institute, and Research Institute for Agriculture and Life Sciences,
 ==References==
 <references>
 * <ref name="ref1">
+Li J, Pandeya D, Nath K, Zulfugarov IS, Yoo SC, Zhang H, Yoo JH, Cho SH, Koh
 </ref>
 </references>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]

← Older revision		Revision as of 08:44, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
−	~~GeneName = Os06g0116400\|~~
−	~~Description = High-affinity nickel-transporter family protein\|~~
−	~~Version = NM_001063155.1 GI:115466041 GeneID:4339930\|~~
−	~~Length = 1467 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os06g0116400, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 6\|Chromosome 6]]\|~~
−	~~AP = Chromosome 6:907857..909323\|~~
−	~~CDS = 907995..908813,909002..909286\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008399:907857..909323~~
−	~~source=RiceChromosome06~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008399:907857..909323~~
−	~~source=RiceChromosome06~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcaatggagaggcttatctcttcgccgctcctcccgcgccggcctccccgcgccgccttctcccgcccgccgccctccctcgccgccgcgccaccccaccaccgcgccggcggtgcggcctccgggtacggctccaggccgcctctcgcctcgctcctcctctccaggcaccaccaccaccaccagcctccggtcctcgcggccaatcctgctgccgatgtggccgccggcgaggctgtccctcccgccaccgccaccgccagccggcgcttcctccagaaggtggcgtcggctgcggctgccactctgttggcgacgattgcactgacgctgatccagccggcgtgggcgccgccggcgttggcgtcgttccactcggcggcgaaggcgggaggtggcatcttcaagtcggagctgctcagcagcgcgtggacggggttcctggccggctgcctgcacacgctctccgggccggaccacctcgccgcgctggcgccgctgtccatcgggaggtcgcgggtggagagcgccgccgtgggcgcgctctggggctgcggccacgacgccggccaggtcatcttcggcctcctgttcctcagcctcaaggaccgcctccacatcgaggtcatccgaacgtgggggacccgcgtcgtcggcctcacgctgctcgtcatcggcgccctcggcatcagggaggccaccgaggtgcccacgccgtgcgtcgcgctggagaacggcggcggcggcggcggcgcgcaccgtggcccgctcgatgctctaccagccaccaggaagaagatcaccttcgccacgttcgccaccgggatcgtgcacgggctgcagcccgacgcgctcatgatggtcctgccggcgctcgccctcccgtcgcgcgtcgccggcgcggcgttccttggcatgttcctcgtcggcaccgtggtcgccatgggcagctacaccgtcctgatcggctcttgtacggaggcgctcaaggagagggttcccaggatcacggagaagctgacatgggctgcctcgctcgtggccatctccatgggcctcggcatcctcatcagccagtctctcggctttagcttgtactga</cdnaseq>\|
−	AA = <aaseq>MAMERLISSPLLPRRPPRAAFSRPPPSLAAAPPHHRAGGAASGY GSRPPLASLLLSRHHHHHQPPVLAANPAADVAAGEAVPPATATASRRFLQKVASAAAA TLLATIALTLIQPAWAPPALASFHSAAKAGGGIFKSELLSSAWTGFLAGCLHTLSGPD HLAALAPLSIGRSRVESAAVGALWGCGHDAGQVIFGLLFLSLKDRLHIEVIRTWGTRV VGLTLLVIGALGIREATEVPTPCVALENGGGGGGAHRGPLDALPATRKKITFATFATG IVHGLQPDALMMVLPALALPSRVAGAAFLGMFLVGTVVAMGSYTVLIGSCTEALKERV PRITEKLTWAASLVAISMGLGILISQSLGFSLY</aaseq>\|
−	DNA = <dnaseqindica>511..1329#38..322#ctcccgagacgaaccacccgaagccgcagcagcagcgatggcaatggagaggcttatctcttcgccgctcctcccgcgccggcctccccgcgccgccttctcccgcccgccgccctccctcgccgccgcgccaccccaccaccgcgccggcggtgcggcctccgggtacggctccaggccgcctctcgcctcgctcctcctctccaggcaccaccaccaccaccagcctccggtcctcgcggccaatcctgctgccgatgtggccgccggcgaggctgtccctcccgccaccgccaccgccagccggcgcttcctccagaaggtgagcgcctcgttgcccgccagttttccgtgtcgcgcctcactcgttcttgcatgtctcgtgtgatgattactgatgtgaatttcttcttcttcttccaagaattgcttctgttttgtgatgttgttgtggtcggaggagtccaagagttagcggagattattgagctcacgcgtttggtttgacaggtggcgtcggctgcggctgccactctgttggcgacgattgcactgacgctgatccagccggcgtgggcgccgccggcgttggcgtcgttccactcggcggcgaaggcgggaggtggcatcttcaagtcggagctgctcagcagcgcgtggacggggttcctggccggctgcctgcacacgctctccgggccggaccacctcgccgcgctggcgccgctgtccatcgggaggtcgcgggtggagagcgccgccgtgggcgcgctctggggctgcggccacgacgccggccaggtcatcttcggcctcctgttcctcagcctcaaggaccgcctccacatcgaggtcatccgaacgtgggggacccgcgtcgtcggcctcacgctgctcgtcatcggcgccctcggcatcagggaggccaccgaggtgcccacgccgtgcgtcgcgctggagaacggcggcggcggcggcggcgcgcaccgtggcccgctcgatgctctaccagccaccaggaagaagatcaccttcgccacgttcgccaccgggatcgtgcacgggctgcagcccgacgcgctcatgatggtcctgccggcgctcgccctcccgtcgcgcgtcgccggcgcggcgttccttggcatgttcctcgtcggcaccgtggtcgccatgggcagctacaccgtcctgatcggctcttgtacggaggcgctcaaggagagggttcccaggatcacggagaagctgacatgggctgcctcgctcgtggccatctccatgggcctcggcatcctcatcagccagtctctcggctttagcttgtactgatccgccatccctcgcgacacctccttcttcttcttcgccattgttaagcttccactgcctccactgtaggaatctgccatgagaattttgcaaatgttgcttgttgagatccaggagaattcaagtttagttcacaag</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063155.1 RefSeq:Os06g0116400]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 6]]~~
−	~~[[Category:~~Chromosome 6]]

← Older revision		Revision as of 20:16, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os06g0116400\|		GeneName = Os06g0116400\|