Os06g0181300 - Revision history

Liman at 08:49, 10 December 2016

2016-12-10T08:49:39Z

Liman at 08:42, 10 December 2016

2016-12-10T08:42:03Z

Liman at 13:30, 15 October 2016

2016-10-15T13:30:00Z

192.168.72.52 at 08:48, 14 May 2015

2015-05-14T08:48:24Z

124.16.129.48 at 20:18, 22 July 2012

2012-07-22T20:18:51Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os06g0181300| Description = ANTHER INDEHISCENCE1| Version = NM_001063513.1 GI:115466757 GeneID:4340310| Length = 3221 bp| Definition = Oryza sa..."

2012-06-24T09:07:11Z

Created page with "{{JaponicaGene| GeneName = Os06g0181300| Description = ANTHER INDEHISCENCE1| Version = NM_001063513.1 GI:115466757 GeneID:4340310| Length = 3221 bp| Definition = Oryza sa..."

New page

{{JaponicaGene|
GeneName = Os06g0181300|
Description = ANTHER INDEHISCENCE1|
Version = NM_001063513.1 GI:115466757 GeneID:4340310|
Length = 3221 bp|
Definition = Oryza sativa Japonica Group Os06g0181300, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
AP = Chromosome 6:4015075..4018295|
CDS = 4015075..4015723,4016526..4016875,4017444..4017619,4017779..4017845,4017932..4017970<br>|
GCID = <gbrowseImage1>
name=NC_008399:4015075..4018295
source=RiceChromosome06
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008399:4015075..4018295
source=RiceChromosome06
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgccgcggctgatgccggaggacgcgtccctgctcctggaccacgtggtcggcgacccctccgtccccgccgccgccgccaacgcggcgctcgcggcgctccccttcccgtcccgccccaccccgcgcctcctcagggcatccctcctccgccgcctcgccgccgacccggtctccgccgccgccctcgactcgctccagctcctcgcctccctcccctcctccccttcccccgccgcccccgccgccgccgccgccgccgccgcccacctcgccgtcgcggcctacctcgcagtctccgcgcccgacttcgacgccgccgcgggggccctcttcgggcgccccggcggccgcgcgcgccgcgcggtcgaggagggtggggccgccgcgctcgcctccgacgaggccgatgccgtggccgaccagttcgaggccgcggtggggaattcgttctcgcagaccgtgctgagggggctctggggcgaccgggccgcggcggaggagcgggtgagggagctcctcgccgtcgagtgggcggcgattgggcagtcccggctggagatggcggcggagaggattgttggggatggcgccattgagacatggagggccgcagatgaggtcacccgagccaagtatcgcttgctcgctggggaacaaagagcacgtgaaattgagggcaaacttggagaaactatccctcaaggaaatcaaatttcgacaccagaagttcataaggtgatggacgcccttaaatcaagctgtgctaaccttcatagtgtagtagaggacccacttccagctgcaaaggcagcagcagatgaggtactggctgcaaggatggataaagcagtcgatctaaatgcgggagaagttagtaatcagccaacggcttgtgacatcgctggtccaagtgctcctgcggacaatttggatgctccaaggaaaggcacagcagccagccttatggattggaatccaacagcaaggacgtttcagtgggaggactcacctgatcctgacggctcacgttcaccgatacatagaccgcagttgcctagcccaaggagaacaacattttctcctctgcaaccggcagataacaaagcgaagcgtagaaaggcaaggaagtggtgcgcgttagaagaggaaacattaagaaagggtgtcgaacagtatggtaacggcaattggaaagatattttaaccaacaatcctgatgtttttattggtcgaaaagcgatggacttgaaagataagtggagaaacatgatgaggtag</cdnaseq>|
AA = <aaseq>MPRLMPEDASLLLDHVVGDPSVPAAAANAALAALPFPSRPTPRL LRASLLRRLAADPVSAAALDSLQLLASLPSSPSPAAPAAAAAAAAHLAVAAYLAVSAP DFDAAAGALFGRPGGRARRAVEEGGAAALASDEADAVADQFEAAVGNSFSQTVLRGLW GDRAAAEERVRELLAVEWAAIGQSRLEMAAERIVGDGAIETWRAADEVTRAKYRLLAG EQRAREIEGKLGETIPQGNQISTPEVHKVMDALKSSCANLHSVVEDPLPAAKAAADEV LAARMDKAVDLNAGEVSNQPTACDIAGPSAPADNLDAPRKGTAASLMDWNPTARTFQW EDSPDPDGSRSPIHRPQLPSPRRTTFSPLQPADNKAKRRKARKWCALEEETLRKGVEQ YGNGNWKDILTNNPDVFIGRKAMDLKDKWRNMMR</aaseq>|
DNA = <dnaseqindica>1..649#1452..1801#2370..2545#2705..2771#2858..2896#atgccgcggctgatgccggaggacgcgtccctgctcctggaccacgtggtcggcgacccctccgtccccgccgccgccgccaacgcggcgctcgcggcgctccccttcccgtcccgccccaccccgcgcctcctcagggcatccctcctccgccgcctcgccgccgacccggtctccgccgccgccctcgactcgctccagctcctcgcctccctcccctcctccccttcccccgccgcccccgccgccgccgccgccgccgccgcccacctcgccgtcgcggcctacctcgcagtctccgcgcccgacttcgacgccgccgcgggggccctcttcgggcgccccggcggccgcgcgcgccgcgcggtcgaggagggtggggccgccgcgctcgcctccgacgaggccgatgccgtggccgaccagttcgaggccgcggtggggaattcgttctcgcagaccgtgctgagggggctctggggcgaccgggccgcggcggaggagcgggtgagggagctcctcgccgtcgagtgggcggcgattgggcagtcccggctggagatggcggcggagaggattgttggggatggcgccattgagacatggagggccgcagatgaggtcacccgagccaagtatcgcttgctcggtaagaatcttatcgcggcatatatttgcggtagcttggcgcgtaaaataacagtatttgtcagcaaatagagatactagtagtggcttttagagtttattaaactggatgaacaaagaacagtagtgttttttttatcccaggagtagcaaggagatagaccttatcttgaaggagtagtaattcagatggaactgttattctgtaaaaatatgtacattgtgcatttagtaatccttgaagtttcgtgcagtttgttaggtcacaattacattgtatggttgaattatttagatgttgcggtacaaatcagtgagtagaaacatgctagtttggacctttgcccgctctatatagccagtagagtttgattcttgctttgtgatttacctgtgcttcatttcatggaagtaccatacagggcttccttctgcttctgttaattgaaaataggaactatgggcaagaatttagagctcatgttcatttaggtctataaatctgtgttcaaaatgttgcctttggaactgctatatcctcttactactagattattttatacagcaggccaagctatgcgattttaatctctcacataatatctgttctggtttgcaattttgcatacatcattagtgtgggtacattttacttgagctgttgttatttggtgagtagttgctccccctatgttttggaatttgtttctgcatgtctttgtccatcaatccttttgctcgagcagttagcttcaatttttttaaaacgttttatagcttattgtgcacattggaaccttcagctggggaacaaagagcacgtgaaattgagggcaaacttggagaaactatccctcaaggaaatcaaatttcgacaccagaagttcataaggtgatggacgcccttaaatcaagctgtgctaaccttcatagtgtagtagaggacccacttccagctgcaaaggcagcagcagatgaggtactggctgcaaggatggataaagcagtcgatctaaatgcgggagaagttagtaatcagccaacggcttgtgacatcgctggtccaagtgctcctgcggacaatttggatgctccaaggaaaggcacagcagccagccttatggattggaatccaacagcaaggacgtttcaggtgagctttcttcatgtatttgtcattatttgcctttttgagaatggtccatgtttcactctttttgattgattttgtgataattgttgcgcatcttgattacccctttttactagaaagtatactcagtgtccttcaatgccacaattcataacacccatggttttctgaatataaactgttctcgatgtctctgcttttaagccttttgtttttctgctttgtgatagtctggaggactcgtgctttcttgtagaagctgctttataacaaacatgtaggatctggaatttattcatcctatattgcatgcatgagtactgaaattagattgatgaatcctttagatccttaatatacttttctagaatatagtgtttctggtttctccatggagacaagactagccgattgcatatcaagaagtaaaatttattataaattagaattaacatcgacttagtgttgtagacattataaagctttctgttagtatgtagatagctttgtagcataactcaaaagcattagattttggacatgttgctcaaaaggcgcttgtttgcagtgggaggactcacctgatcctgacggctcacgttcaccgatacatagaccgcagttgcctagcccaaggagaacaacattttctcctctgcaaccggcagataacaaagcgaagcgtagaaaggcaaggaagtggtgcgcgttagaagaggaaacattaagaaagggtgtcgaacagtatgttctttttgtcttgctgttgtaatctgttgttagtttggtataactttcttgttctacatattgccgtttggattgcctctatacacacaatttctgcaactgttatattgtgctaaccatttctatgcgcgtggtttttcttttcatgtgaaggtatggtaacggcaattggaaagatattttaaccaacaatcctgatgtttttattggtcgaaaagcggtgagcatctggatatcagtatatcatattaagtccctttttttaaatgtttttttcataaagtaattgcctgttgtatcttgtagatggacttgaaagataagtggagaaacatgatgaggtagggatcaatgacaaggcaccagagagagttctctttcattctagctgaagaacctttaagaagccctagggcatataattctggtggttcgatacgctgaagcaccaagcccttctactgctgaagactgaggagcagttgggtttgatgcatttctttttgtgctccaccgacatatccccagtagattcgggcgagaattcgtcagattagtaccagatgcttacaagtcatggttttaagccccccttgtaatttggaacagattctgaatttctggtgctgtatgtattcattcagtgagaatctgtatccagcttttgctg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063513.1 RefSeq:Os06g0181300]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 6]]
[[Category:Chromosome 6]]

@@ Line 6: / Line 6: @@
 ===Function===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''AID1''''' gene on chromosome 6 is predicted to encode a novel protein of 426 amino acids with a single MYB domain. The MYB domain of '''''AID1''''' is closely related to that of the telomere-binding proteins of human, mouse, and Arabidopsis, and of single MYB domain transcriptional regulators in plants such as PcMYB1 and ZmIBP1.
 ===Mutation===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* Anther indehiscence1 (aid1), showing partial to complete spikelet sterility. Spikelets of the aid1 mutant could be classified into three types based on the viability of pollen grains and the extent of anther dehiscence. Type 1 spikelets (approximately 25%) were sterile due to a failure in accumulation of starch in pollen grains. Type 2 spikelets (approximately 55%) had viable pollen grains, but anthers failed to dehisce and/or synchronize with anthesis due to failure in septum degradation and stomium breakage, resulting in sterility. Type 3 spikelets (approximately 20%) had normal fertility. In addition, aid1 mutant plants had fewer tillers and flowered 10 to 15 d later than the wild type.
 ===Expression ===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''AID1''''' was expressed in both the leaves and panicles of wild-type plants, but not in mutant plants.
 ===Evolution===

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os06g0181300 was reported as '''''aid1''''' in 2004<ref name="ref1" /> by researchers from Australia.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os06g0181300 <=> aid1, OsAID1
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+* CSIRO Plant Industry, Canberra, Australian Capital Territories 2601, Australia
 ==References==
 <references>
 * <ref name="ref1">
 </ref>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]

← Older revision		Revision as of 08:48, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
−	~~GeneName = Os06g0181300\|~~
−	~~Description = ANTHER INDEHISCENCE1\|~~
−	~~Version = NM_001063513.1 GI:115466757 GeneID:4340310\|~~
−	~~Length = 3221 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os06g0181300, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 6\|Chromosome 6]]\|~~
−	~~AP = Chromosome 6:4015075..4018295\|~~
−	~~CDS = 4015075..4015723,4016526..4016875,4017444..4017619,4017779..4017845,4017932..4017970<br>\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008399:4015075..4018295~~
−	~~source=RiceChromosome06~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008399:4015075..4018295~~
−	~~source=RiceChromosome06~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgccgcggctgatgccggaggacgcgtccctgctcctggaccacgtggtcggcgacccctccgtccccgccgccgccgccaacgcggcgctcgcggcgctccccttcccgtcccgccccaccccgcgcctcctcagggcatccctcctccgccgcctcgccgccgacccggtctccgccgccgccctcgactcgctccagctcctcgcctccctcccctcctccccttcccccgccgcccccgccgccgccgccgccgccgccgcccacctcgccgtcgcggcctacctcgcagtctccgcgcccgacttcgacgccgccgcgggggccctcttcgggcgccccggcggccgcgcgcgccgcgcggtcgaggagggtggggccgccgcgctcgcctccgacgaggccgatgccgtggccgaccagttcgaggccgcggtggggaattcgttctcgcagaccgtgctgagggggctctggggcgaccgggccgcggcggaggagcgggtgagggagctcctcgccgtcgagtgggcggcgattgggcagtcccggctggagatggcggcggagaggattgttggggatggcgccattgagacatggagggccgcagatgaggtcacccgagccaagtatcgcttgctcgctggggaacaaagagcacgtgaaattgagggcaaacttggagaaactatccctcaaggaaatcaaatttcgacaccagaagttcataaggtgatggacgcccttaaatcaagctgtgctaaccttcatagtgtagtagaggacccacttccagctgcaaaggcagcagcagatgaggtactggctgcaaggatggataaagcagtcgatctaaatgcgggagaagttagtaatcagccaacggcttgtgacatcgctggtccaagtgctcctgcggacaatttggatgctccaaggaaaggcacagcagccagccttatggattggaatccaacagcaaggacgtttcagtgggaggactcacctgatcctgacggctcacgttcaccgatacatagaccgcagttgcctagcccaaggagaacaacattttctcctctgcaaccggcagataacaaagcgaagcgtagaaaggcaaggaagtggtgcgcgttagaagaggaaacattaagaaagggtgtcgaacagtatggtaacggcaattggaaagatattttaaccaacaatcctgatgtttttattggtcgaaaagcgatggacttgaaagataagtggagaaacatgatgaggtag</cdnaseq>\|
−	AA = <aaseq>MPRLMPEDASLLLDHVVGDPSVPAAAANAALAALPFPSRPTPRL LRASLLRRLAADPVSAAALDSLQLLASLPSSPSPAAPAAAAAAAAHLAVAAYLAVSAP DFDAAAGALFGRPGGRARRAVEEGGAAALASDEADAVADQFEAAVGNSFSQTVLRGLW GDRAAAEERVRELLAVEWAAIGQSRLEMAAERIVGDGAIETWRAADEVTRAKYRLLAG EQRAREIEGKLGETIPQGNQISTPEVHKVMDALKSSCANLHSVVEDPLPAAKAAADEV LAARMDKAVDLNAGEVSNQPTACDIAGPSAPADNLDAPRKGTAASLMDWNPTARTFQW EDSPDPDGSRSPIHRPQLPSPRRTTFSPLQPADNKAKRRKARKWCALEEETLRKGVEQ YGNGNWKDILTNNPDVFIGRKAMDLKDKWRNMMR</aaseq>\|
−	DNA = <dnaseqindica>1..649#1452..1801#2370..2545#2705..2771#2858..2896#atgccgcggctgatgccggaggacgcgtccctgctcctggaccacgtggtcggcgacccctccgtccccgccgccgccgccaacgcggcgctcgcggcgctccccttcccgtcccgccccaccccgcgcctcctcagggcatccctcctccgccgcctcgccgccgacccggtctccgccgccgccctcgactcgctccagctcctcgcctccctcccctcctccccttcccccgccgcccccgccgccgccgccgccgccgccgcccacctcgccgtcgcggcctacctcgcagtctccgcgcccgacttcgacgccgccgcgggggccctcttcgggcgccccggcggccgcgcgcgccgcgcggtcgaggagggtggggccgccgcgctcgcctccgacgaggccgatgccgtggccgaccagttcgaggccgcggtggggaattcgttctcgcagaccgtgctgagggggctctggggcgaccgggccgcggcggaggagcgggtgagggagctcctcgccgtcgagtgggcggcgattgggcagtcccggctggagatggcggcggagaggattgttggggatggcgccattgagacatggagggccgcagatgaggtcacccgagccaagtatcgcttgctcggtaagaatcttatcgcggcatatatttgcggtagcttggcgcgtaaaataacagtatttgtcagcaaatagagatactagtagtggcttttagagtttattaaactggatgaacaaagaacagtagtgttttttttatcccaggagtagcaaggagatagaccttatcttgaaggagtagtaattcagatggaactgttattctgtaaaaatatgtacattgtgcatttagtaatccttgaagtttcgtgcagtttgttaggtcacaattacattgtatggttgaattatttagatgttgcggtacaaatcagtgagtagaaacatgctagtttggacctttgcccgctctatatagccagtagagtttgattcttgctttgtgatttacctgtgcttcatttcatggaagtaccatacagggcttccttctgcttctgttaattgaaaataggaactatgggcaagaatttagagctcatgttcatttaggtctataaatctgtgttcaaaatgttgcctttggaactgctatatcctcttactactagattattttatacagcaggccaagctatgcgattttaatctctcacataatatctgttctggtttgcaattttgcatacatcattagtgtgggtacattttacttgagctgttgttatttggtgagtagttgctccccctatgttttggaatttgtttctgcatgtctttgtccatcaatccttttgctcgagcagttagcttcaatttttttaaaacgttttatagcttattgtgcacattggaaccttcagctggggaacaaagagcacgtgaaattgagggcaaacttggagaaactatccctcaaggaaatcaaatttcgacaccagaagttcataaggtgatggacgcccttaaatcaagctgtgctaaccttcatagtgtagtagaggacccacttccagctgcaaaggcagcagcagatgaggtactggctgcaaggatggataaagcagtcgatctaaatgcgggagaagttagtaatcagccaacggcttgtgacatcgctggtccaagtgctcctgcggacaatttggatgctccaaggaaaggcacagcagccagccttatggattggaatccaacagcaaggacgtttcaggtgagctttcttcatgtatttgtcattatttgcctttttgagaatggtccatgtttcactctttttgattgattttgtgataattgttgcgcatcttgattacccctttttactagaaagtatactcagtgtccttcaatgccacaattcataacacccatggttttctgaatataaactgttctcgatgtctctgcttttaagccttttgtttttctgctttgtgatagtctggaggactcgtgctttcttgtagaagctgctttataacaaacatgtaggatctggaatttattcatcctatattgcatgcatgagtactgaaattagattgatgaatcctttagatccttaatatacttttctagaatatagtgtttctggtttctccatggagacaagactagccgattgcatatcaagaagtaaaatttattataaattagaattaacatcgacttagtgttgtagacattataaagctttctgttagtatgtagatagctttgtagcataactcaaaagcattagattttggacatgttgctcaaaaggcgcttgtttgcagtgggaggactcacctgatcctgacggctcacgttcaccgatacatagaccgcagttgcctagcccaaggagaacaacattttctcctctgcaaccggcagataacaaagcgaagcgtagaaaggcaaggaagtggtgcgcgttagaagaggaaacattaagaaagggtgtcgaacagtatgttctttttgtcttgctgttgtaatctgttgttagtttggtataactttcttgttctacatattgccgtttggattgcctctatacacacaatttctgcaactgttatattgtgctaaccatttctatgcgcgtggtttttcttttcatgtgaaggtatggtaacggcaattggaaagatattttaaccaacaatcctgatgtttttattggtcgaaaagcggtgagcatctggatatcagtatatcatattaagtccctttttttaaatgtttttttcataaagtaattgcctgttgtatcttgtagatggacttgaaagataagtggagaaacatgatgaggtagggatcaatgacaaggcaccagagagagttctctttcattctagctgaagaacctttaagaagccctagggcatataattctggtggttcgatacgctgaagcaccaagcccttctactgctgaagactgaggagcagttgggtttgatgcatttctttttgtgctccaccgacatatccccagtagattcgggcgagaattcgtcagattagtaccagatgcttacaagtcatggttttaagccccccttgtaatttggaacagattctgaatttctggtgctgtatgtattcattcagtgagaatctgtatccagcttttgctg</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063513.1 RefSeq:Os06g0181300]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 6]]~~
−	~~[[Category:~~Chromosome 6]]

← Older revision		Revision as of 20:18, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os06g0181300\|		GeneName = Os06g0181300\|