Os06g0208800 - Revision history

Rice2012: /* Structured Information */

2015-06-12T08:09:10Z

‎Structured Information

Huanghs: /* Evolution */

2014-06-09T12:56:56Z

‎Evolution

Huanghs: /* Evolution */

2014-06-09T12:56:42Z

‎Evolution

Huanghs: /* Others about this gene */

2014-06-09T12:56:13Z

‎Others about this gene

Huanghs: /* Others about this gene */

2014-06-09T12:55:47Z

‎Others about this gene

Huanghs: /* Evolution */

2014-06-09T12:55:23Z

‎Evolution

Huanghs: /* Expression */

2014-06-09T12:55:00Z

‎Expression

Huanghs: /* Function */

2014-06-09T12:54:35Z

‎Function

Huanghs: /* Labs working on this gene */

2014-06-09T12:54:18Z

‎Labs working on this gene

Huanghs at 12:53, 9 June 2014

2014-06-09T12:53:57Z

@@ Line 546: / Line 546: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

@@ Line 313: / Line 313: @@
 ===Evolution===
-*The promiscuity of Os-LYP4 and Os-LYP6 in binding carbohydrate MAMPs PGN and chitin is reminiscent of At-FLS2
+*The promiscuity of Os-LYP4 and Os-LYP6 in binding carbohydrate MAMPs PGN and chitin is reminiscent of At-FLS2 binding three different ligands, including flagellin and Ax21 as well as the endogenous CLV3 peptide <ref name="ref11" />
 <ref name="ref12" /> The promiscuity of PRRs in sensing multiple
 MAMPs provides a distinct physiological advantage to the

@@ Line 313: / Line 313: @@
 ===Evolution===
-*The promiscuity of Os-LYP4 and Os-LYP6 in binding carbohydrate
+*The promiscuity of Os-LYP4 and Os-LYP6 in binding carbohydrate MAMPs PGN and chitin is reminiscent of At-FLS2
 binding three different ligands, including flagellin and Ax21 as
 well as the endogenous CLV3 peptide <ref name="ref11" />

@@ Line 444: / Line 444: @@
 ==Others about this gene==
-*PGN and Chitin Engage Overlapping Perception
+*'''PGN and Chitin Engage Overlapping Perception Components in Rice'''
 The aforementioned data suggested that LYP4 and LYP6 may
 be shared by both PGN and chitin perception systems in rice. If

@@ Line 444: / Line 444: @@
 ==Others about this gene==
-PGN and Chitin Engage Overlapping Perception
+*PGN and Chitin Engage Overlapping Perception
 Components in Rice
 The aforementioned data suggested that LYP4 and LYP6 may

@@ Line 286: / Line 286: @@
 ===Expression===
-* LYP6 Expression Can Be Induced Quickly by Bacterial Pathogen Infection or Diverse MAMPs
+* '''LYP6 Expression Can Be Induced Quickly by Bacterial Pathogen Infection or Diverse MAMPs'''
 To understand better the function of LYP4 and LYP6, we
 checked the expression profiles of these genes in different

@@ Line 3: / Line 3: @@
 ==Annotated Information==
 ===Function===
 *'''Rice LYP6 Is LysM-Containing Protein Localized at the Plasma Membrane'''

@@ Line 486: / Line 486: @@
 ==Labs working on this gene==
-*State Key Laboratory of Biocontrol, Key Laboratory of Gene Engineering of the Ministry of Education and Guangdong Key Laboratory
+*State Key Laboratory of Biocontrol, Key Laboratory of Gene Engineering of the Ministry of Education and Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, 510275 Guangzhou, People’s Republic of China
 ==References==

@@ Line 64: / Line 64: @@
 fraction through immunoblotting with anti-GFP antibodies
 '''(Figure 1C)'''. Taken together, these data confirmed that LYP4 and
-LYP6 localize at the plasma membrane of rice cells.
+LYP6 localize at the plasma membrane of rice cells.<ref name="ref1" />
 *'''LYP6 Can Physically Bind PGN and Chitin'''
@@ Line 127: / Line 127: @@
 be precipitated only by chitin but not PGN, while the full-length
 rice CERK1 proteins expressed in rice protoplasts could be pulled
-down by neither MAMP '''(Figure 2E)'''.
+down by neither MAMP '''(Figure 2E)'''.<ref name="ref1" />
 *'''Silencing of  LYP6 Compromises Diverse PGN- and Chitin-Induced Defense Responses in Rice'''
@@ Line 185: / Line 185: @@
 OX transgenic rice than in the control rice '''(Figure 3C)'''. These
 data further strengthened the notion that LYP4 and LYP6 play
-crucial roles in PGN- and chitin-induced defense signaling in rice.
+crucial roles in PGN- and chitin-induced defense signaling in rice.<ref name="ref1" />
 * '''LYP6 Affects Rice Susceptibility to Both Bacterial and Fungal Pathogens'''
@@ Line 223: / Line 223: @@
 These results indicated that upregulation of LYP4 and LYP6
 expression in rice leads to an enhanced resistance against both
-bacterial and fungal infection.
+bacterial and fungal infection.<ref name="ref1" />
 [[File:69F1.jpg|frame|Figure 1. LysM-Containing LYP4 and LYP6 Are Rice Plasma Membrane Proteins.
@@ Line 249: / Line 249: @@
 of each gene was examined by qPCR.
 The experiments in (B) to (G) were repeated three times with similar results.
-The data in (D), (E), and (G) represent the mean 6 SD of nine samples from three independent tests.]]
+The data in (D), (E), and (G) represent the mean 6 SD of nine samples from three independent tests.<ref name="ref1" />]]
 [[File:69F2.jpg|frame|Figure 2. LYP4 and LYP6 Selectively Bind PGN and Chitin but Not LPS.
@@ Line 267: / Line 267: @@
 (0.5%) was used to lyse protoplasts and solubilize membrane proteins.
 One of the three biological repeats with similar results is shown, and results were obtained by immunoblotting using anti-His, anti-MYC, or anti-HA
-antibodies.]]
+antibodies.<ref name="ref1" />]]
 [[File:69F3.jpg|frame|Figure 3. RNAi Silencing or Overexpressing of LYP4 and LYP6 Specifically Modulate PGN- and Chitin- but Not LPS-Induced Defense Responses in Rice.
@@ Line 281: / Line 281: @@
 leaf of 5-d-old wild-type, LYP4-RNAi-1, LYP6-RNAi-2, LYP4-OX-2, or LYP6-OX-3 rice seedling was immersed into solution containing 10 mg/mL
 PGNXoo muropeptides or N-acetylchitohexaose and vacuumed for 30 min. Callose staining was conducted 18 h later.
-At least three biological repeats were conducted for individual experiments.]]
+At least three biological repeats were conducted for individual experiments.<ref name="ref1" />]]
 ===Expression===
@@ Line 416: / Line 416: @@
 and chitin perception machineries between rice and Arabidopsis
 will provide valuable evolutionary insights for understanding critical
-mechanisms underlying innate immunity signaling in plants.
+mechanisms underlying innate immunity signaling in plants.<ref name="ref1" />
-[[File:69F4.jpg|frame|Figure 4. RNAi Silencing or Overexpressing of LYP4 and LYP6 Affects Rice Innate Immunity against Bacterial and Fungal Pathogens.]]
+[[File:69F4.jpg|frame|Figure 4. RNAi Silencing or Overexpressing of LYP4 and LYP6 Affects Rice Innate Immunity against Bacterial and Fungal Pathogens.<ref name="ref1" />]]
 [[File:69F5.jpg|frame|Figure 5. PGN and Chitin Engage Overlapping Receptor Components in
@@ Line 439: / Line 439: @@
 curve), or 10 nM flg22 (purple curve).
 Three biological replicates were conducted for (A) to (C), and similar
-results were obtained.]]
+results were obtained.<ref name="ref1" />]]
 ==Others about this gene==
@@ Line 483: / Line 483: @@
 these experiments '''(Figures 5A to 5C)''' were active elicitors.
 Taken together, these data indirectly support the notion that LYP4 and LYP6 are dual function receptors for PGN and chitin
-in rice.
+in rice.<ref name="ref1" />
 ==Labs working on this gene==