Os06g0254700 - Revision history

Zhennan at 01:40, 30 June 2016

2016-06-30T01:40:09Z

Zhennan: /* References */

2016-06-25T09:31:06Z

‎References

Rice2012: /* Structured Information */

2015-06-12T08:12:27Z

‎Structured Information

Yanshufeng at 05:42, 9 June 2014

2014-06-09T05:42:50Z

Yanshufeng at 05:42, 9 June 2014

2014-06-09T05:42:34Z

Yanshufeng: /* Annotated Information */

2014-06-09T05:35:41Z

‎Annotated Information

Yanshufeng: /* References */

2014-06-09T05:24:53Z

‎References

124.16.129.48 at 20:20, 22 July 2012

2012-07-22T20:20:51Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os06g0254700| Description = Caleosin related family protein| Version = NM_001063839.1 GI:115467409 GeneID:4340665| Length = 2956 bp| Definition..."

2012-06-24T09:12:59Z

Created page with "{{JaponicaGene| GeneName = Os06g0254700| Description = Caleosin related family protein| Version = NM_001063839.1 GI:115467409 GeneID:4340665| Length = 2956 bp| Definition..."

New page

{{JaponicaGene|
GeneName = Os06g0254700|
Description = Caleosin related family protein|
Version = NM_001063839.1 GI:115467409 GeneID:4340665|
Length = 2956 bp|
Definition = Oryza sativa Japonica Group Os06g0254700, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
AP = Chromosome 6:8010880..8013835|
CDS = 8011087..8011234,8011335..8011460,8012161..8012258,8013057..8013142,8013279..8013434<br>,8013594..8013627|
GCID = <gbrowseImage1>
name=NC_008399:8010880..8013835
source=RiceChromosome06
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008399:8010880..8013835
source=RiceChromosome06
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcctccaaacccgcggacgttacggctacaggtggcggcggcgtcgccgtcgtccgtgacaacaacaacaacgccggcggcggcgaggcggaggtgtaccgctccgagctgacgccgctgcagaagcacgtcgccttcttcgaccgcaacaaggacggcatcatctacccctccgagacctaccaagggttccgcgcaatcggggcaggagtcgtgctgtccgccgtcggcgccgtgttcatcaatggcggacttgggcccaagacgataccggagaacaccaagactggtctcaagttacccatatacgtcaagaacatccacaaaggcaagcatggaagcgattcaggcgtgtatgatgcgaatggaaggtttgtcccagaaaagttcgaggaaatattcaagaagcatgctcacaccaggcctgatgccctaacagacaaagagctgaaggagttgctccaatcaaacagggagcctaaagatttcaaaggatggttgggtggcttcacagagtggaaagtattgtactacctctgcaaagacaaggatggatttcttcacaaggatactgtcagggcagtctatgatggaagcctatttgcaaagatggagcaagagaagcagtctgctaagaagaaatga</cdnaseq>|
AA = <aaseq>MASKPADVTATGGGGVAVVRDNNNNAGGGEAEVYRSELTPLQKH VAFFDRNKDGIIYPSETYQGFRAIGAGVVLSAVGAVFINGGLGPKTIPENTKTGLKLP IYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQSNRE PKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKKK</aaseq>|
DNA = <dnaseqindica>2602..2749#2376..2501#1578..1675#694..779#402..557#209..242#agcgaggcatccaccaccatcagccaaagtgccaaacgatcgatcgatctctgcagtctgcagattagcccaccacctccagcatcgggtccacgaatgcacaccctgtcaactccactccacccgcttttctttccctctccccgccaccttcacatctcaacctttcctctccctctctctctctctctctgatctcgtcgttcccatggcctccaaacccgcggacgttacggctacaggtgagccatctatctacatacacacgtcctcgtagtaacgcgccatggctgctgcttcttcttcttcttcttcgtctgcttattatggcggcgcgaataaatctgtcgcgttccttgtcgccaccgtcgtcaccgtgcctctgtgtgccctgctgctaggtggcggcggcgtcgccgtcgtccgtgacaacaacaacaacgccggcggcggcgaggcggaggtgtaccgctccgagctgacgccgctgcagaagcacgtcgccttcttcgaccgcaacaaggacggcatcatctacccctccgagacctaccaaggtttcagctcacgcagccaccaccaccgatcgatcccctttcctcttcactgttcacacagcgattattttcttcatgatttttttctttttctcaagcgttcgattcgttcgttcgttgctgcgcttgcttgcagggttccgcgcaatcggggcaggagtcgtgctgtccgccgtcggcgccgtgttcatcaatggcggacttgggcccaagacgataccggtcagtacaacagctgcagacatcaaatctccctctctgtctcaattcaatgttactgttttcttgcatactgccaaagtgccaacgctttgctttgctcgctctgcgccaaaacatgaactgtctttttttttttttgtctagttgttgcaagctactatctgggtatgcacaggtgtttcttagttcaatttcacagtttgggtactgtttcttcgttcagttcatcgacaatatttcagtagatgagcacaacaaactaatatctcctgccactaattttccatttctgttgcacaagccataggcccgtagctaagcgcgtctcatggttaagaaaaagaagatacaatttcttttacaatatttattcagatcggtgttaaaagtatcaaacgattaggaaactactaaacgagaaacgtattcgtaacgtggaatatataccaatgccagcacctacattgcaagggaaagatacctcctttaattcggaaaaagaaagagaaagcactgatgaagcaccactgcactgataagataactgaaaagaaagagaacaccaatgggccacgcattattgcataatatcgatagacacggacaatacaactgcattttcttgtgtgtactggacagagtaaagtctcaggctcagctcacttttctgttgcctctttaatcttttcaaattgactttgaaacagagacacgaaatggggattgatttagttgcacgaactatttactgatgctgactctcgtttaccatttttcaacctcactgctttactgtaggagaacaccaagactggtctcaagttacccatatacgtcaagaacatccacaaaggcaagcatggaagcgattcaggcgtgtatgatgcgaatggaaggtacctttctatattattatgtttttaagctgaaggtaccttaatttctttatgtgtcagcatcagtatgaacatgactcatgcggccagcacagatgtcagatgtttaattgggcttaatcgctttgtcgttgtactttactcatcaagattaggataaattaagccagcacctaaccataaagtaacacagacgcggatgaattgcttaacaaacaggagaactgaatcgcctttttcatgtggcatggtgatgcagagatttgagggatatcacccggccaaaaagatttgagagatatctgtttattaggcactttagttgtctgttccttctgtcaaaagctagtgaagatgcatccaaactatagttctaagagagatcacgcataatatgaaatcaaagatatggttgtttcattttctttagaacacttggttgttccattgcatgcatagtttaatacgtgtgaaatgcacatggtgaaaaaaatattgccactaagactcatggtatcacattgagatctataagcttttaggatcactatgcagtgaggctatcactgctgttgttttcttattgtttttgtttcaatgcgaacaaacaaaggcacttgtcttagctagagtcgtaaaaataatgcaatagggtaacatggatctagatttgctaaccacacaatatgtacacttgcaggtttgtcccagaaaagttcgaggaaatattcaagaagcatgctcacaccaggcctgatgccctaacagacaaagagctgaaggagttgctccaatcaaacagggagcctaaagatttcaaaggatggtgagttctcatctagattaagactgtaagaacaatggtaaaatgaagttatgttttgtccatgctcatccttttttttctttgggggaaaacgttgcaggttgggtggcttcacagagtggaaagtattgtactacctctgcaaagacaaggatggatttcttcacaaggatactgtcagggcagtctatgatggaagcctatttgcaaagatggagcaagagaagcagtctgctaagaagaaatgataagaccatactgggtgctgtaattatctgttattgttgcaggtgattgtaaattacggtgtgggtgtgaatccaaaattattgctgtagtttgattgcgcgtgtttgttgacccgttcctgtaacaagaagctatttgtgaagttattggaagtgtttgtaaacatggtggtatcctctgatttattcacttcatttttttctttt</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063839.1 RefSeq:Os06g0254700]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 6]]
[[Category:Chromosome 6]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Function===
 Os06g0254700 is a stress responsive gene. It encodes the caleosin which mainly lay in oil body or lipid body.These physiological and biochemical processes including regulation of genes involvedin stomatal closure, maintaining internal and external balance of water and ions,adjusting the synthesis and catabolism.Caleosins not only promote formation of oil body but also is related to drought stress.
 ===Expression===
 It is located on chromosome 6.There are two other caleosin genes-Os06g0254300 and Os06g0254600 in chromosome 6.These three genes get together because tandem duplication.Caleosins have a significant feature that EF-hand domain in N-terminal can combine Ca2+,a central hydrophobic region and a security protein kinase phosphorylation sites in C-terminal.Caleosins's N-terminal and C-terminal are located in the cytoplasm,however central hydrophobic region are anchored in the phospholipid monolayer membrane.
 ===Evolution===
 Six caleosin genes in rice distribute on four different chromosomes.Os06g0254300,Os06g0254600, OsCLO-6 three genes are located to adjacent position of chromosome 6.Homology of Os06g0254300 and Os06g0254600reach to 92%,Os06g0254600 and Os06g0254700 is 49%.Indicating that Os06g0254300 and Os06g0254600 originated in a close repeated events, but Os06g0254700 and Os06g0254600 repeated earlier.Excavations and research in arid pathway for in-depth understand the mechanisms of plant drought, reducing the effects of drought, etc,are great significance Os06g0254700 contains introns,it is described Os06g0254700 is not originated in retrotransposition events.
 You can also add sub-section(s) at will.

@@ Line 16: / Line 16: @@
 ==References==
   Muhammad F, Abdul W, Dong J L, et al. Advances in drought resistance of rice. Crit Rev Plant Sci, 2009, 28: 199–217
   Zhang J H, Jia W S, Yang J C, etal. Role of ABA in integrating plant responses to drought and salt stresses. Field Crop Res, 2006, 97:

← Older revision		Revision as of 05:42, 9 June 2014
Line 1:		Line 1:
−	~~Please input one-sentence summary here.~~
	Os06g0254700 encode a caleosin		Os06g0254700 encode a caleosin
	==Annotated Information==		==Annotated Information==

@@ Line 1: / Line 1: @@
 Please input one-sentence summary here.
+Os06g0254700 encode a caleosin
 ==Annotated Information==
 ===Function===

@@ Line 4: / Line 4: @@
 ===Function===
 Please input function information here.
+Os06g0254700 is a stress responsive gene. It encodes the caleosin which mainly lay in oil body or lipid body.These physiological and biochemical processes including regulation of genes involvedin stomatal closure, maintaining internal and external balance of water and ions,adjusting the synthesis and catabolism.Caleosins not only promote formation of oil body but also is related to drought stress.
 ===Expression===
 Please input expression information here.
+It is located on chromosome 6.There are two other caleosin genes-Os06g0254300 and Os06g0254600 in chromosome 6.These three genes get together because tandem duplication.Caleosins have a significant feature that EF-hand domain in N-terminal can combine Ca2+,a central hydrophobic region and a security protein kinase phosphorylation sites in C-terminal.Caleosins's N-terminal and C-terminal are located in the cytoplasm,however central hydrophobic region are anchored in the phospholipid monolayer membrane.
 ===Evolution===
 Please input evolution information here.
+Six caleosin genes in rice distribute on four different chromosomes.Os06g0254300,Os06g0254600, OsCLO-6 three genes are located to adjacent position of chromosome 6.Homology of Os06g0254300 and Os06g0254600reach to 92%,Os06g0254600 and Os06g0254700 is 49%.Indicating that Os06g0254300 and Os06g0254600 originated in a close repeated events, but Os06g0254700 and Os06g0254600 repeated earlier.Excavations and research in arid pathway for in-depth understand the mechanisms of plant drought, reducing the effects of drought, etc,are great significance Os06g0254700 contains introns,it is described Os06g0254700 is not originated in retrotransposition events.
 You can also add sub-section(s) at will.

@@ Line 28: / Line 28: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

← Older revision		Revision as of 20:20, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os06g0254700\|		GeneName = Os06g0254700\|