Os07g0164000 - Revision history

Xysj2012: /* Structured Information */

2015-06-12T08:33:40Z

‎Structured Information

Guanchayuan: /* References */

2014-06-09T13:51:52Z

‎References

Guanchayuan: /* Labs working on this gene */

2014-06-09T13:48:50Z

‎Labs working on this gene

Guanchayuan: /* Function */

2014-06-09T13:43:33Z

‎Function

Guanchayuan: /* Evolution */

2014-06-09T13:36:15Z

‎Evolution

Guanchayuan: /* Expression */

2014-06-09T13:25:16Z

‎Expression

Guanchayuan: /* Expression */

2014-06-09T13:24:06Z

‎Expression

Guanchayuan: /* Function */

2014-06-09T13:20:14Z

‎Function

124.16.129.48 at 20:31, 22 July 2012

2012-07-22T20:31:35Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os07g0164000| Description = Double-stranded RNA binding domain containing protein| Version = NM_001065491.1 GI:115470714 GeneID:4342471| Length ..."

2012-06-24T08:23:35Z

Created page with "{{JaponicaGene| GeneName = Os07g0164000| Description = Double-stranded RNA binding domain containing protein| Version = NM_001065491.1 GI:115470714 GeneID:4342471| Length ..."

New page

{{JaponicaGene|
GeneName = Os07g0164000|
Description = Double-stranded RNA binding domain containing protein|
Version = NM_001065491.1 GI:115470714 GeneID:4342471|
Length = 5251 bp|
Definition = Oryza sativa Japonica Group Os07g0164000, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
AP = Chromosome 7:3461634..3466884|
CDS = 3461827..3462261,3462542..3462670,3462781..3462897,3462973..3463124,3463219..3463897<br>,3463976..3464153,3464407..3464655,3464738..3465195,3465793..3465885<br>,3466402..3466692|
GCID = <gbrowseImage1>
name=NC_008400:3461634..3466884
source=RiceChromosome07
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008400:3461634..3466884
source=RiceChromosome07
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgccgttgcggctgagaggcggcgggggatcgaagcgagggatgccggcggcgccgacggtgacgcccaaggcggtgatccaccagaagtacggcgccaaggcgtgctacagcgtggaggaggtgcgggaggccgtcgacggcggctgccccggcctcgcgctgccgcagcagaccaggagcgtctaccgctgctcgctcgacatccccggcctcaccgtcgtcaccccgggcaccttcgtcaggaagaaggacgccgagcaagccgccgcgcagattgccctcgacaagcttggtattcagcccactgcaaatgctcccagtactcctgaagaagcatgggatgaacttattgctcgcatatctggtttttttacagatgagaacttcccctcgtcatctcatcctcttattggccacatgtgtgtgacattcagaagaaccggggaccgctttggtatgattcctatgtcagcaattgctgcatgtgatgtgaaggtcattggactgtgtaaacttattgaccccaaagcggagtttgatcctctcttggttttatcattaatctataatgctgccaaaaaatcccctggtgtctctgtcagtgatagcaacttctggatttggagtcagaagccttattcccctgaggctgttgatttggcacttcagcattggtctggcataacggatcccatagaagtagatgggatttttgttccttgtatgatggaggatgaacctaagacaataagacttactttatcacataatgaacattacatgggtgatatagtgtctaagctctctgcaagtgattcctcccacgctgttgtttcaagaactgttggcaaagcatcttctgagataaggctatatttctcagctccaaatgtgcaatttgtttctgagatatcacacaatgtggtttcttctcttggagatggctatatggagagcctaataaataagcgagcttccttcatttctggtcaaacaatttatggagatgcaattttggctaatgttggatatacaaggagagactcagagcttcatactgaagatgttaccttatccaactattacaggattcttctgggcaaatcaccagatgggaattacaagatatccagggattcaattctggtggcagagcttccatctgtgtattctcgttctagttggaagggtctctctccacgagatcttctctgctcattttgtcgccttcacagactagcagagccctacttcgctgtcaataggtgtgctagtgatggaaagaatgacaaggaaaacccagatatgttcaaatgtgatgtcaaaatatattcaaagaagcaggagcttttattggagtattcgacagctgatacttggagcaaggaatctgatgccattcacaattcttcattgaaggtgttgatttggttctgtagttatttcaagcaaccgaacaagcatgtactgaagctctctcattctaagagcactgatggcttcacaatatgtccagataattttttgcatgaatttgccatgttcttatctatttatggcaacagaggaggtgatgactcaagtgcatgcagtacagttggatcgctttctatggatacctcaaaacaaaagcttgaaaacaatgcagttttagcacacattgatggtccagattctggtgtttttccatcccatggatcattgacttgcataagctatactgcttccttggtggtgaaggacaaaacaaacagatatacgctagaaagcaacaatgagtttgagtttgagatagggactggggctgttaagaatcagattgaatcatgcgtgagtcagctgtcagttaatcaaagcgcatgtttcatagctgaattgcctcctaaggatttgatccttgctgcagctaatgagttttctcatgacctttccaagatatctagagacaattgcttcttggagttctctgtaaaggtattgcaggtaactgaaccattagaagatagaatggaaaaagccttgtttaatcctcctttatctaaacaaagagtggaattcgctgttcggtacatcaatgagctgcatgctaccacattggttgattttggctgtggatctggtagccttcttgattcattgcttgagcatccaacaacccttgaaaaagttgtcggtgttgacatttctcggaagggtctcacacgagcagcaaagagccttcatcagaagctgagcaagaaatcgttgatgcagacaagtgttccaacggctgtgctctatgatggttctataacggattttgattctcgcttatacagatttgacattggcacttgtcttgaggtgattgagcacgtagaggaggaccaagcaagtttatgtggcgacgtcgtcttgagttcgttctgccctacggtgctgattgtttcaacacccaactatgaatacaaccctatcctccagagatcagctatgccaaacaaggaagaagaaccagaagaaaacgctggtccttgcaagttccgaaaccatgaccacaagttcgagtggacaagatcccagttccagcactgggctaccggactcgcagaaaagcacaactacagcgtcgagttcagtggcgttggcggatcaggcgatgaaccaggcttcgcttcccagatcgctgtcttcagaagaatggcgtcgggtcaagatgaggtttgccaggagggagagctgcatcaaccttatgagcttctctgggaatggccaaatgcatcgttgccatctcactga</cdnaseq>|
AA = <aaseq>MPLRLRGGGGSKRGMPAAPTVTPKAVIHQKYGAKACYSVEEVRE AVDGGCPGLALPQQTRSVYRCSLDIPGLTVVTPGTFVRKKDAEQAAAQIALDKLGIQP TANAPSTPEEAWDELIARISGFFTDENFPSSSHPLIGHMCVTFRRTGDRFGMIPMSAI AACDVKVIGLCKLIDPKAEFDPLLVLSLIYNAAKKSPGVSVSDSNFWIWSQKPYSPEA VDLALQHWSGITDPIEVDGIFVPCMMEDEPKTIRLTLSHNEHYMGDIVSKLSASDSSH AVVSRTVGKASSEIRLYFSAPNVQFVSEISHNVVSSLGDGYMESLINKRASFISGQTI YGDAILANVGYTRRDSELHTEDVTLSNYYRILLGKSPDGNYKISRDSILVAELPSVYS RSSWKGLSPRDLLCSFCRLHRLAEPYFAVNRCASDGKNDKENPDMFKCDVKIYSKKQE LLLEYSTADTWSKESDAIHNSSLKVLIWFCSYFKQPNKHVLKLSHSKSTDGFTICPDN FLHEFAMFLSIYGNRGGDDSSACSTVGSLSMDTSKQKLENNAVLAHIDGPDSGVFPSH GSLTCISYTASLVVKDKTNRYTLESNNEFEFEIGTGAVKNQIESCVSQLSVNQSACFI AELPPKDLILAAANEFSHDLSKISRDNCFLEFSVKVLQVTEPLEDRMEKALFNPPLSK QRVEFAVRYINELHATTLVDFGCGSGSLLDSLLEHPTTLEKVVGVDISRKGLTRAAKS LHQKLSKKSLMQTSVPTAVLYDGSITDFDSRLYRFDIGTCLEVIEHVEEDQASLCGDV VLSSFCPTVLIVSTPNYEYNPILQRSAMPNKEEEPEENAGPCKFRNHDHKFEWTRSQF QHWATGLAEKHNYSVEFSGVGGSGDEPGFASQIAVFRRMASGQDEVCQEGELHQPYEL LWEWPNASLPSH</aaseq>|
DNA = <dnaseqindica>4624..5058#4215..4343#3988..4104#3761..3912#2988..3666#2732..2909#2230..2478#1690..2147#1000..1092#193..483#cccacttcacccgactcctcgaatcctcctcgcctcgcttccgatttttctggggggtttagcgcctcccccaattcggcgaccaccccctcccgattccgcctcagttcctgcgtcgatcgattgcgaaaatccccttcgttaccaatcgcatttgtttgtttgtttttgtttgttttttttgggcgtttgatgccgttgcggctgagaggcggcgggggatcgaagcgagggatgccggcggcgccgacggtgacgcccaaggcggtgatccaccagaagtacggcgccaaggcgtgctacagcgtggaggaggtgcgggaggccgtcgacggcggctgccccggcctcgcgctgccgcagcagaccaggagcgtctaccgctgctcgctcgacatccccggcctcaccgtcgtcaccccgggcaccttcgtcaggaagaaggacgccgagcaagccgccgcgcagattgccctcgacaaggtattgatgagcattgtggtggtggcatgcaacttcacctttttttttttgctttacatgtgtagttgcaaaatcatcttccatatacatagagatttatcgtgtagcctttaagtttgtgattagatacggcgatatgcacaatgcacgattcagttagcaattgtgtctcacctatgaggaattgaggaatgtcacaagtgcaaggtggagttctctcaagtctcaaatagtcaaatctcaccttagtttggttattcaattcctgagtgagcacctaattgtgttgctcattgtctttgttgccatttcttttgatagtaccctctgttttctgttctgacaaaccaatgccatcgacgttagtgatcaagctgcacagtaacctagctcctttgtatttctctatcggataagctatgtacctatgatatatgaaatatcattactatgtgaaatgttgttcatgctgtggacctatggtgattaccatttcttttattgtcttcgttgtagcttggtattcagcccactgcaaatgctcccagtactcctgaagaagcatgggatgaacttattgctcgcatatctggtttttttacagatgaggttagtattttccacttgatcttggtgttgtgtcattgtagttcagggattaaggtgcacacaacagaaggctacagcaaaaggaagttttcatattcatgatgttacatatttgagtggaatgctatgctctgctggcaattgaggagtgtaatagggatataggatccttatgatgggctgtgtatgtcgtagggttgcatgatcataaccattgcaactcttataattggagttaagaaagactctgtattactggaattaagaggttatgggtatctatgtggtaaagagaccggaccatcgagcttactacaaaaaacatttcccttaaggctttgctttctatgtttctgcagtttcaacctgctttggtacacattcttctttacatagacatgtcacatgatcaccaaataccaatattgaagtctgaatcattttgtgtacacaagaatacaggattatagttgaagcatgcggctatataatcatattattattcagagcatcagatgtaactgaaaaacaattaatttgttctaaccgaccttttctaacatgtctgtcttttttttttcctactcttctattcagaacttcccctcgtcatctcatcctcttattggccacatgtgtgtgacattcagaagaaccggggaccgctttggtatgattcctatgtcagcaattgctgcatgtgatgtgaaggtcattggactgtgtaaacttattgaccccaaagcggagtttgatcctctcttggttttatcattaatctataatgctgccaaaaaatcccctggtgtctctgtcagtgatagcaacttctggatttggagtcagaagccttattcccctgaggctgttgatttggcacttcagcattggtctggcataacggatcccatagaagtagatgggatttttgttccttgtatgatggaggatgaacctaagacaataagacttactttatcacataatgaacattacatgggtgatatagtgtctaagctctctgcaagtgattcctcccacgctgttgtttcaaggtcagtattgtgccgagccttctcttctgaccattgtcattatttttggtgtgctgataatcttaaaattgtctcactgcagaactgttggcaaagcatcttctgagataaggctatatttctcagctccaaatgtgcaatttgtttctgagatatcacacaatgtggtttcttctcttggagatggctatatggagagcctaataaataagcgagcttccttcatttctggtcaaacaatttatggagatgcaattttggctaatgttggatatacaaggagagactcagagcttcatactgaagatgttaccttatccaactattacaggtatcgatttgttgattatgtcacttgtatgagatatattttgactttagtttaattcaatatgcatacttcattttttttataagaatcatctggttgtagatagatcttgatctgatttttcttcacactgtcatctactcgactactactcttccatcatttgaattgattttctctattgtttaggcacaccttctgttctcatcttagtttctaattcttctgaataacttgctttttggtaactcaggattcttctgggcaaatcaccagatgggaattacaagatatccagggattcaattctggtggcagagcttccatctgtgtattctcgttctagttggaagggtctctctccacgagatcttctctgctcattttgtcgccttcacagactagcagagccctacttcgctgtcaatagggtaagtgcctcttgtaaagtgttaggatcacctgtaagctccgaggagatggacgtgctaaagaatgctgaaaatcagtgtgctagtgatggaaagaatgacaaggaaaacccagatatgttcaaatgtgatgtcaaaatatattcaaagaagcaggagcttttattggagtattcgacagctgatacttggagcaaggaatctgatgccattcacaattcttcattgaaggtgttgatttggttctgtagttatttcaagcaaccgaacaagcatgtactgaagctctctcattctaagagcactgatggcttcacaatatgtccagataattttttgcatgaatttgccatgttcttatctatttatggcaacagaggaggtgatgactcaagtgcatgcagtacagttggatcgctttctatggatacctcaaaacaaaagcttgaaaacaatgcagttttagcacacattgatggtccagattctggtgtttttccatcccatggatcattgacttgcataagctatactgcttccttggtggtgaaggacaaaacaaacagatatacgctagaaagcaacaatgagtttgagtttgagatagggactggggctgttaagaatcagattgaatcatgcgtgagtcagctgtcagttaatcaaagcgcatgtttcatagctgaattgcctcctaaggatttgatccttgctgcagctaatgagttttctcatgacctttccaagatatctagaggtgaggtccaatcttaacacctcagtctgataattttcattaccagcttgaatttggctgaagcactatgctcaagttttaaccatccttgcagacaattgcttcttggagttctctgtaaaggtattgcaggtaactgaaccattagaagatagaatggaaaaagccttgtttaatcctcctttatctaaacaaagagtggaattcgctgttcggtacatcaatgagctgcatgctaccacattggtaaatattcttctcatcctacttccatatttgccaagcatattagcttatcactattgaagtaaatttgttcaggttgattttggctgtggatctggtagccttcttgattcattgcttgagcatccaacaacccttgaaaaagttgtcggtgttgacatttctcggaagggtctcacacgagcagcaaaggcacgtaacagagccttgatgactgttgatagttagttcaccctttaaaccatcccttttgttctctccaatgcttggcaatgactcctttcatctctctgaatttgcagagccttcatcagaagctgagcaagaaatcgttgatgcagacaagtgttccaacggctgtgctctatgatggttctataacggattttgattctcgcttatacagatttgacattggcacttgtcttgaggtcagttactcctgaactgtttctgctgtcttctcaattgcctctagtacatggataccacgattaattgattggattaagaatcacatagcctaatcacatttgtatagtagtacaatgggaagtccatccttagaaatgctgatgtggattcattattttgttcatagtagtacagtgggaagtccatccttacaaatgctgatgtggatttctctttgatctctcaaacgttagatttagttggacatgctattcgactgaccaaagctacttgcaggtgattgagcacgtagaggaggaccaagcaagtttatgtggcgacgtcgtcttgagttcgttctgccctacggtgctgattgtttcaacacccaactatgaatacaaccctatcctccagagatcagctatgccaaacaaggaagaagaaccagaagaaaacgctggtccttgcaagttccgaaaccatgaccacaagttcgagtggacaagatcccagttccagcactgggctaccggactcgcagaaaagcacaactacagcgtcgagttcagtggcgttggcggatcaggcgatgaaccaggcttcgcttcccagatcgctgtcttcagaagaatggcgtcgggtcaagatgaggtttgccaggagggagagctgcatcaaccttatgagcttctctgggaatggccaaatgcatcgttgccatctcactgagttcttgtggtagggagacacgacaactctattaactcttcaccatgcttgtaactgagatggagattctgattagtactgtagttggcattaacttgtcgtcagtaggaaactcaactcaagatcgtgtccccggatgttggtgggttaatgccttgggctgtgttctaaagtcaatgttgccaatttcacc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001065491.1 RefSeq:Os07g0164000]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 7]]
[[Category:Chromosome 7]]

@@ Line 18: / Line 18: @@
 ==References==
-Please input cited references here.
+Masashi Abe;Takanori Yoshikawa;Misuzu Nosaka;Hitoshi Sakakibara;Yutaka Sato;Yasuo Nagato;Jun-ichi Itoh WAVY LEAF1, an Ortholog of Arabidopsis HEN1, Regulates Shoot Development by Maintaining MicroRNA and Trans-Acting Small Interfering RNA Accumulation in Rice Plant Physiology,2010,154(3):1335-1346
 ==Structured Information==

@@ Line 14: / Line 14: @@
 ==Labs working on this gene==
-Please input related labs here.
+This work was supported by Grants-in-Aid for Scientific Research from the Ministry of Education,Culture,Sports,Science and Technology of Japan(grant nos. 20248001 to Y.N. and 21027007 to J.-i.I.).
 ==References==

@@ Line 4: / Line 4: @@
 ===Function===
 WAF1 is required for the stabilization of small RNAs through methylating the last nucleotide,as is Arabidopsis ''HEN1''.
 ===Expression===

@@ Line 10: / Line 10: @@
 ===Evolution===
-Please input evolution information here.
+WAF1 is associated with multiple developmental events via the stabilization of many small RNAs.The phenotypic differences between rice WAF1 and Arabidopsis hen1 suggest that during evolution rice has acquired novel small RNAs and/or target genes that are regulated by WAF1.
 ==Labs working on this gene==

@@ Line 7: / Line 7: @@
 ===Expression===
 The expression levels of target genes are not always negatively correlated with the miRNA accumulation levels in waf1.This is typically shown in the expression
-levels of HD-ZIP IIIgenes inwaf1,none of which showed enhanced expression in spite of the drastic reduction inmiR166accumulation.
+levels of HD-ZIP IIIgenes in WAF1,none of which showed enhanced expression in spite of the drastic reduction in miR166 accumulation.
 ===Evolution===

@@ Line 21: / Line 21: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

← Older revision		Revision as of 20:31, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os07g0164000\|		GeneName = Os07g0164000\|