Os07g0227800 - Revision history

Xysj1980: /* Subcellular localization */

2017-03-27T01:20:35Z

‎Subcellular localization

Xysj1980: /* Function */

2017-03-27T01:20:18Z

‎Function

Xysj1980: /* Function */

2017-03-27T01:19:58Z

‎Function

Xysj1980 at 01:19, 27 March 2017

2017-03-27T01:19:15Z

Xysj1980: /* Evolution */

2017-03-27T01:17:46Z

‎Evolution

Xysj1980: /* Expression */

2017-03-27T01:17:29Z

‎Expression

Xysj2012: /* Structured Information */

2015-06-12T08:37:30Z

‎Structured Information

Littlescrew: /* Annotated Information */

2014-06-26T09:13:35Z

‎Annotated Information

Littlescrew: /* References */

2014-06-26T09:10:35Z

‎References

Littlescrew: /* Labs working on this gene */

2014-06-26T09:09:54Z

‎Labs working on this gene

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 ===Subcellular localization===
-The subcellular localization is predicted that OsABC1-1 and OsABC1-8 were localized in the cytoplasm, OsABC1-3 and OsABC1-6 in the plasma membrane, OsABC1-10 in mitochondria, OsABC1-14 in vacuoles and the others in chloroplasts <ref name="ref4" />.
+* The subcellular localization is predicted that OsABC1-1 and OsABC1-8 were localized in the cytoplasm, OsABC1-3 and OsABC1-6 in the plasma membrane, OsABC1-10 in mitochondria, OsABC1-14 in vacuoles and the others in chloroplasts <ref name="ref4" />.
 You can also add sub-section(s) at will.

@@ Line 6: / Line 6: @@
 [[File:abc1-table.jpg|right|thumb|330px|'''Table.1'' Basic information of the rice ABC1 genes.(from reference) <ref name="ref4" />.]]
-* ABC1 domain is an important part of the ABC1 proteins, and aligned results show that the domains of all proteins were from 102–126 amino acids, except the OsABC1-14 and OsABC1-15 proteins. The length of the domain in OsABC1-14 and OsABC1-15 is 92 amino acids and 184 amino acids, respectively <ref name="ref4" />. The XaXasX2QV segment that functions as a nucleotide-binding motif for protein kinases is highly conserved in ABC1 domain as well as lysine residue in N-terminal that as a binding site for chemical groups. In addition, other conserved amino acid valine and aspartate acid in the middle of the domain and glutamate acid in the C-terminal. It is also suggested that there are 10 putative motifs in rice ABC1 proteins (Fig1).
+* ABC1 domain is an important part of the ABC1 proteins, and aligned results show that the domains of all proteins were from 102–126 amino acids, except the OsABC1-14 and OsABC1-15 proteins. The length of the domain in OsABC1-14 and OsABC1-15 is 92 amino acids and 184 amino acids, respectively <ref name="ref4" />.
 [[File:motif10.jpg|right|thumb|330px|'''Fig.1'' Motif composition of rice ABC1 proteins.(from reference) <ref name="ref4" />.]]

@@ Line 4: / Line 4: @@
 * Members of the activity of bc1 complex (ABC1) family are widely existed in prokaryotes and eukaryotes as protein kinases. These protein kinase members were initially isolated from Saccharomyces cerevisiae and were responsible to suppress a defect in mRNA translation of cytochrome b and maintain the activity of the bc1 complex in the mitochondrial respiratory chain <ref name="ref1" />.
 * Mitochondrial and chloroplast ABC1 proteins is associated in respiratory electron transport system and as a lipid-soluble antioxidant in ''yeast'', ''Escherichia col'', and human <ref name="ref2" /><ref name="ref3" />.
-There are 15 non-redundant ABC1genes distributed on all rice chromosomes randomly except chromosomes 3, 8, 10, and 12 in rice, and were named from OsABC1-1 to OsABC1-15 according to their chromosomal location (table 1). However, there are 17 members of ABC1 family in ''Arabidopsis''. All of these genes contain introns and the number of intron varies greatly, and intron gain was an important event accompanying the recent evolution of the rice ABC1 family <ref name="ref4" />.
-[[File:abc1-table.jpg|middle|thumb|530px|'''Table.1'' Basic information of the rice ABC1 genes.(from reference) <ref name="ref4" />.]]
+[[File:abc1-table.jpg|right|thumb|330px|'''Table.1'' Basic information of the rice ABC1 genes.(from reference) <ref name="ref4" />.]]
 * ABC1 domain is an important part of the ABC1 proteins, and aligned results show that the domains of all proteins were from 102–126 amino acids, except the OsABC1-14 and OsABC1-15 proteins. The length of the domain in OsABC1-14 and OsABC1-15 is 92 amino acids and 184 amino acids, respectively <ref name="ref4" />. The XaXasX2QV segment that functions as a nucleotide-binding motif for protein kinases is highly conserved in ABC1 domain as well as lysine residue in N-terminal that as a binding site for chemical groups. In addition, other conserved amino acid valine and aspartate acid in the middle of the domain and glutamate acid in the C-terminal. It is also suggested that there are 10 putative motifs in rice ABC1 proteins (Fig1).
-[[File:motif10.jpg|middle|thumb|430px|'''Fig.1'' Motif composition of rice ABC1 proteins.(from reference) <ref name="ref4" />.]]
+[[File:motif10.jpg|right|thumb|330px|'''Fig.1'' Motif composition of rice ABC1 proteins.(from reference) <ref name="ref4" />.]]
 ===Expression===

@@ Line 1: / Line 1: @@
 ''OsABC1-9'' contains 13 extrons and is located in chromosome 7, and this gene encodes a proteins with 793 amino acids.
 ==Annotated Information==
 ===Function===
-Members of the activity of bc1 complex (ABC1) family are widely existed in prokaryotes and eukaryotes as protein kinases. These protein kinase members were initially isolated from Saccharomyces cerevisiae and were responsible to suppress a defect in mRNA translation of cytochrome b and maintain the activity of the bc1 complex in the mitochondrial respiratory chain <ref name="ref1" />. Mitochondrial and chloroplast ABC1 proteins is associated in respiratory electron transport system and as a lipid-soluble antioxidant in ''yeast'', ''Escherichia col'', and human <ref name="ref2" /><ref name="ref3" />.
+* Members of the activity of bc1 complex (ABC1) family are widely existed in prokaryotes and eukaryotes as protein kinases. These protein kinase members were initially isolated from Saccharomyces cerevisiae and were responsible to suppress a defect in mRNA translation of cytochrome b and maintain the activity of the bc1 complex in the mitochondrial respiratory chain <ref name="ref1" />.
 There are 15 non-redundant ABC1genes distributed on all rice chromosomes randomly except chromosomes 3, 8, 10, and 12 in rice, and were named from OsABC1-1 to OsABC1-15 according to their chromosomal location (table 1). However, there are 17 members of ABC1 family in ''Arabidopsis''. All of these genes contain introns and the number of intron varies greatly, and intron gain was an important event accompanying the recent evolution of the rice ABC1 family <ref name="ref4" />.
 [[File:abc1-table.jpg|middle|thumb|530px|'''Table.1'' Basic information of the rice ABC1 genes.(from reference) <ref name="ref4" />.]]
-ABC1 domain is an important part of the ABC1 proteins, and aligned results show that the domains of all proteins were from 102–126 amino acids, except the OsABC1-14 and OsABC1-15 proteins. The length of the domain in OsABC1-14 and OsABC1-15 is 92 amino acids and 184 amino acids, respectively <ref name="ref4" />. The XaXasX2QV segment that functions as a nucleotide-binding motif for protein kinases is highly conserved in ABC1 domain as well as lysine residue in N-terminal that as a binding site for chemical groups. In addition, other conserved amino acid valine and aspartate acid in the middle of the domain and glutamate acid in the C-terminal. It is also suggested that there are 10 putative motifs in rice ABC1 proteins (Fig1).
+* ABC1 domain is an important part of the ABC1 proteins, and aligned results show that the domains of all proteins were from 102–126 amino acids, except the OsABC1-14 and OsABC1-15 proteins. The length of the domain in OsABC1-14 and OsABC1-15 is 92 amino acids and 184 amino acids, respectively <ref name="ref4" />. The XaXasX2QV segment that functions as a nucleotide-binding motif for protein kinases is highly conserved in ABC1 domain as well as lysine residue in N-terminal that as a binding site for chemical groups. In addition, other conserved amino acid valine and aspartate acid in the middle of the domain and glutamate acid in the C-terminal. It is also suggested that there are 10 putative motifs in rice ABC1 proteins (Fig1).
 [[File:motif10.jpg|middle|thumb|430px|'''Fig.1'' Motif composition of rice ABC1 proteins.(from reference) <ref name="ref4" />.]]
 The real-time PCR results show that 14 genes express mainly in leaves. The subcellular localization is predicted that OsABC1-1 and OsABC1-8 were localized in the cytoplasm, OsABC1-3 and OsABC1-6 in the plasma membrane, OsABC1-10 in mitochondria, OsABC1-14 in vacuoles and the others in chloroplasts <ref name="ref4" />.
 Members of this family participate in the extensive abiotic stress response and may play roles in the tolerance of plants to adverse environments. Furthermore, some of the rice ABC1 genes may be involved in the oxidative stress response and ABA signaling<ref name="ref4" />.

@@ Line 11: / Line 11: @@
 The real-time PCR results show that 14 genes express mainly in leaves. The subcellular localization is predicted that OsABC1-1 and OsABC1-8 were localized in the cytoplasm, OsABC1-3 and OsABC1-6 in the plasma membrane, OsABC1-10 in mitochondria, OsABC1-14 in vacuoles and the others in chloroplasts <ref name="ref4" />.
 Members of this family participate in the extensive abiotic stress response and may play roles in the tolerance of plants to adverse environments. Furthermore, some of the rice ABC1 genes may be involved in the oxidative stress response and ABA signaling<ref name="ref4" />.
 You can also add sub-section(s) at will.

@@ Line 33: / Line 33: @@
 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

@@ Line 24: / Line 24: @@
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==

@@ Line 20: / Line 20: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Jiangsu Provincial Key Laboratory of Crop Genetics and Physiology
 ==References==