Os08g0159500 - Revision history

Xysj1980 at 12:10, 25 March 2017

2017-03-25T12:10:43Z

Xysj1980 at 12:08, 25 March 2017

2017-03-25T12:08:51Z

Guangyi: /* Annotated Information */

2016-12-20T08:28:20Z

‎Annotated Information

Guangyi at 08:22, 20 December 2016

2016-12-20T08:22:54Z

192.168.72.52 at 12:56, 14 May 2015

2015-05-14T12:56:07Z

124.16.129.48 at 20:44, 22 July 2012

2012-07-22T20:44:48Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os08g0159500| Description = Similar to Zinc-finger protein Lsd1| Version = NM_001067577.1 GI:115474890 GeneID:4344713| Length = 2961 bp| Defini..."

2012-06-21T12:47:55Z

Created page with "{{JaponicaGene| GeneName = Os08g0159500| Description = Similar to Zinc-finger protein Lsd1| Version = NM_001067577.1 GI:115474890 GeneID:4344713| Length = 2961 bp| Defini..."

New page

{{JaponicaGene|
GeneName = Os08g0159500|
Description = Similar to Zinc-finger protein Lsd1|
Version = NM_001067577.1 GI:115474890 GeneID:4344713|
Length = 2961 bp|
Definition = Oryza sativa Japonica Group Os08g0159500, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
AP = Chromosome 8:3459801..3462761|
CDS = 3460071..3460106,3460273..3460382,3460843..3460956,3461277..3461390,3461821..3462001<br>|
GCID = <gbrowseImage1>
name=NC_008401:3459801..3462761
source=RiceChromosome08
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008401:3459801..3462761
source=RiceChromosome08
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgcatctttctgcagggtttctttcatgtagggaaaggaaaggtgatttcagttgcctgactgctgccagaatctgcgaagcatctacaagcgacgccgtcgttcaggcagccggcacggcaatgccggttccccttgctccatacccaaccccgcctgtgccatttacacctcccaatggggctcaaagccagctcgtgtgctctgggtgccgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcgcagtttgcagtaccgtgactgctgtgcctgctcctggaaccgagatggcgcagttagtttgcggaggatgccacactctcctgatgtatatacgcggtgcgacgagtgtgcaatgttcttgctgtcacactgtcaacctggctatggaagcaaatcaagttgcgcatgtaaactgcgggaactgccgtatgctgctcatgtaccagtatggcgcaaggtctgtcaaatgcgcagtctgcaattttgtgacatcagttggggcctcacctggtacagaccagaagcccagcagctga</cdnaseq>|
AA = <aaseq>MHLSAGFLSCRERKGDFSCLTAARICEASTSDAVVQAAGTAMPV PLAPYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEM AQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARS VKCAVCNFVTSVGASPGTDQKPSS</aaseq>|
DNA = <dnaseqindica>2656..2691#2380..2489#1806..1919#1372..1485#761..941#gtaagagagaggagatagagagagctgtactaactgatgaactgctctcatgcaagccagattaccataaagattgggtcataagcactgttgttaggtgctgcttctgctcctaattatttttttctctctggatgtttttttgttgaatggttgataattcctccatctttgagtttctatcttctctttggcttgctctggtcttgttcatgattctttacctgtttcttgattgctgatggcaagcatttccttgttgtttttggactcaagatttagctggtaattttatatccacctaccttatcatgtacttgttcttgctcatcttttatcaggttatcaatgggaaatagttttcatggacgttattggccgtgaatcccaagtggtgtggctaatctctccaaactaataaaagttcatgtgagttttgttggtattttagcacaaaaaaagtactcaaatagctctttgcctggatgccatacccaccaatgaattttcaattatcgggtggttcttatttttttgggtatatgtaaacagaatctgaacacaagatttgatgagagattcaaccaagaagctgaaattttttgcacctgatgtgcattgctgaaccaattttctgttgcataaagagtcctgaaacttcatgttgcaaactgaagcgtgatgttctaacatttttccattggagctttcactggtttcttcagaactgaaatctttcttgctttctcatcagcttctcatgcatctttctgcagggtttctttcatgtagggaaaggaaaggtgatttcagttgcctgactgctgccagaatctgcgaagcatctacaagcgacgccgtcgttcaggcagccggcacggcaatgccggttccccttgctccatacccaaccccgcctgtgccatttacacctcccaatggtatggattccaacttggcactgcaagaacacagctacttttttagttttttttcccctgatgttggctggtcacctgaaaatgttgggctgactgattaatttaatcttttctcaagatgtgcatattaagtgtttgccctggtgcatgcttttggattagaaatcttgtgaactaaactttcttagacagtttttgttgaatcaaatgttactgttcctggttcagaggtagcagtttattctgctcatagaaataagttcagagagaactcccacttgataaaatggaagttctttactgctgagttttgttgtctgaaatgaaaacattgcatggaagatgcttttgttgtctgaaaatgaaaatgttagctgctgaaatgtgagattcagtcagtctctgaagagccatgattgtgcaatttcaggggctcaaagccagctcgtgtgctctgggtgccgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcgcagtttgcagtaccgtgactgctgtgcctgctcctggtatgcacatgattcactcaggttttacatctcaaggttttgtttgtaagtaatgtggcatctgaaaattgagtttctttgcatctaaattttatagtagtttagaagtttatattgtaccctctgttttatttacaaaagtgagtagtttttggtttttagagcagaaatatagctgcaatgttcacaaaaatgtaaagagagattaaaggggatagcctgttttcccttgaaatcgatgcatgagttttgcatttgctgaaattttgttctgaaatgcagttttgccaatgattttcctacctggaatttctgtgcaggaaccgagatggcgcagttagtttgcggaggatgccacactctcctgatgtatatacgcggtgcgacgagtgtgcaatgttcttgctgtcacactgtcaacctggctatggaaggtactaccaaaatttatcatcctcctcctctgttgcaattggtatattctgtggctttgattccagtatgcaaaatcctcctcctgaacagaatattttcctgtggctgaaagcaacagcaatcagtcggtagcaataaacatcgtcgagttggcttgtattccagtcatattcatgagagttggctatggttcagaaaacaaaaaagtttgacaaggatacactagatttaccagagtatgatgaaatatctcctacaattacaagatgtgctacagtagtatcctatacttactgaaggtctcacaaggacacctaatttagcatcaagttctgaagttccatataatttgttcagagttcagagttttctttaaggcagacttctgaaagatgagtgtttgttcatataatcttaaacacactgaataacaaatgattcccatgttcttgatggcagcaaatcaagttgcgcatgtaaactgcgggaactgccgtatgctgctcatgtaccagtatggcgcaaggtctgtcaaatgcgcagtctgcaattttgtgacatcagttggggtaagtgttcatcaacaggacacttcaatttcatatttagttcctttatctgaaaacattcaattttacagtagcatcatctaatggctaatattgcactgcaacctgatttttttcatgatgtgaccttagttgaagagtgtgttttttttctgaatcttttcaggcctcacctggtacagaccagaagcccagcagctgaactgctgaagtgccataaatattcagaaaagagcttctcaaaccgatgctttgagtgcacatgtatagagttcttccctgaagcattttttttcttccttttttatctccctttccccccaatttccaccttccttccttggatatggagagagcctgcggaataaatgagagttttgctaaatacctagtgctcaaaattcgtcgaatcgtctgtatgaccgaacaagattgacatattatatacataaacctatgataatatttatgc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067577.1 RefSeq:Os08g0159500]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 8]]
[[Category:Chromosome 8]]

@@ Line 5: / Line 5: @@
 *'''Os08g0159500 <=> 	OsLSD1'''
 ===Function===
-*'''''OsLSD1''''' is a rice zinc finger protein, regulates programmed cell death and callus differentiation
+*'''''OsLSD1''''' is a rice zinc finger protein, which can regulates programmed cell death and callus differentiation
 ===Expression===
 *Overexpression of '''OsRAN2''' in rice resulted in enhanced sensitivity to salinity, osmotic stress, and ABA. Seedlings of transgenic Arabidopsis thaliana plants overexpressing '''OsRAN2''' were overly sensitive to salinity stress and exogenous ABA treatment.

@@ Line 1: / Line 1: @@
-The rice '''Os08g0159500''' was reported as '''	OsLSD1''' in 2009 <ref name="ref1" /> by researchers from the China.
+The rice '''Os08g0159500''' was reported as '''	OsLSD1''' in 2005 <ref name="ref1" /> by researchers from the China.
 <br>
 ==Annotated Information==
 ===Gene Symbol===
 *'''Os08g0159500 <=> 	OsLSD1'''
 ===Function===
-*'''OsRAN2''' pleiotropic developmental abnormalities and were male sterile
+*'''''OsLSD1''''' is a rice zinc finger protein, regulates programmed cell death and callus differentiation
 ===Expression===
 *Overexpression of '''OsRAN2''' in rice resulted in enhanced sensitivity to salinity, osmotic stress, and ABA. Seedlings of transgenic Arabidopsis thaliana plants overexpressing '''OsRAN2''' were overly sensitive to salinity stress and exogenous ABA treatment.
 *'''OsRAN2'''overexpression in tobacco epidermal leaf cells disturbed the nuclear import of a maize (Zea mays L.) leaf colour transcription factor (Lc). In addition, gene-silenced rice plants generated via RNA interference (RNAi) displayed pleiotropic developmental abnormalities and were male sterile.
 ==Labs working on this gene==
-*Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Graduate School of Chinese Academy of Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China
+* National Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, P R. China.
 ==References==
 <references>
 <ref name="ref1">
-Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress
+Wang, Lijuan, Zhongyou Pei, Yingchuan Tian, and Chaozu He. "OsLSD1, a rice zinc finger protein, regulates programmed cell death and callus differentiation." Molecular Plant-Microbe Interactions 18, no. 5 (2005): 375-384.
 </ref>

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-Please input function information here.
+*'''OsRAN2''' pleiotropic developmental abnormalities and were male sterile
+<br>
 ===Expression===
-Please input expression information here.
+*Overexpression of '''OsRAN2''' in rice resulted in enhanced sensitivity to salinity, osmotic stress, and ABA. Seedlings of transgenic Arabidopsis thaliana plants overexpressing '''OsRAN2''' were overly sensitive to salinity stress and exogenous ABA treatment.
+*'''OsRAN2'''overexpression in tobacco epidermal leaf cells disturbed the nuclear import of a maize (Zea mays L.) leaf colour transcription factor (Lc). In addition, gene-silenced rice plants generated via RNA interference (RNAi) displayed pleiotropic developmental abnormalities and were male sterile.
-===Evolution===
+<br>
 ==Labs working on this gene==

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os08g0159500''' was reported as '''	OsLSD1''' in 2009 <ref name="ref1" /> by researchers from the China.
+<br>
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 14: / Line 17: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Graduate School of Chinese Academy of Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China
-==References==
+</references>
-Please input cited references here.
+<br>
 ==Structured Information==
 		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]

← Older revision		Revision as of 12:56, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
−	~~GeneName = Os08g0159500\|~~
−	~~Description = Similar to Zinc-finger protein Lsd1\|~~
−	~~Version = NM_001067577.1 GI:115474890 GeneID:4344713\|~~
−	~~Length = 2961 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os08g0159500, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 8\|Chromosome 8]]\|~~
−	~~AP = Chromosome 8:3459801..3462761\|~~
−	~~CDS = 3460071..3460106,3460273..3460382,3460843..3460956,3461277..3461390,3461821..3462001<br>\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008401:3459801..3462761~~
−	~~source=RiceChromosome08~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008401:3459801..3462761~~
−	~~source=RiceChromosome08~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgcatctttctgcagggtttctttcatgtagggaaaggaaaggtgatttcagttgcctgactgctgccagaatctgcgaagcatctacaagcgacgccgtcgttcaggcagccggcacggcaatgccggttccccttgctccatacccaaccccgcctgtgccatttacacctcccaatggggctcaaagccagctcgtgtgctctgggtgccgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcgcagtttgcagtaccgtgactgctgtgcctgctcctggaaccgagatggcgcagttagtttgcggaggatgccacactctcctgatgtatatacgcggtgcgacgagtgtgcaatgttcttgctgtcacactgtcaacctggctatggaagcaaatcaagttgcgcatgtaaactgcgggaactgccgtatgctgctcatgtaccagtatggcgcaaggtctgtcaaatgcgcagtctgcaattttgtgacatcagttggggcctcacctggtacagaccagaagcccagcagctga</cdnaseq>\|
−	AA = <aaseq>MHLSAGFLSCRERKGDFSCLTAARICEASTSDAVVQAAGTAMPV PLAPYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEM AQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARS VKCAVCNFVTSVGASPGTDQKPSS</aaseq>\|
−	DNA = <dnaseqindica>2656..2691#2380..2489#1806..1919#1372..1485#761..941#gtaagagagaggagatagagagagctgtactaactgatgaactgctctcatgcaagccagattaccataaagattgggtcataagcactgttgttaggtgctgcttctgctcctaattatttttttctctctggatgtttttttgttgaatggttgataattcctccatctttgagtttctatcttctctttggcttgctctggtcttgttcatgattctttacctgtttcttgattgctgatggcaagcatttccttgttgtttttggactcaagatttagctggtaattttatatccacctaccttatcatgtacttgttcttgctcatcttttatcaggttatcaatgggaaatagttttcatggacgttattggccgtgaatcccaagtggtgtggctaatctctccaaactaataaaagttcatgtgagttttgttggtattttagcacaaaaaaagtactcaaatagctctttgcctggatgccatacccaccaatgaattttcaattatcgggtggttcttatttttttgggtatatgtaaacagaatctgaacacaagatttgatgagagattcaaccaagaagctgaaattttttgcacctgatgtgcattgctgaaccaattttctgttgcataaagagtcctgaaacttcatgttgcaaactgaagcgtgatgttctaacatttttccattggagctttcactggtttcttcagaactgaaatctttcttgctttctcatcagcttctcatgcatctttctgcagggtttctttcatgtagggaaaggaaaggtgatttcagttgcctgactgctgccagaatctgcgaagcatctacaagcgacgccgtcgttcaggcagccggcacggcaatgccggttccccttgctccatacccaaccccgcctgtgccatttacacctcccaatggtatggattccaacttggcactgcaagaacacagctacttttttagttttttttcccctgatgttggctggtcacctgaaaatgttgggctgactgattaatttaatcttttctcaagatgtgcatattaagtgtttgccctggtgcatgcttttggattagaaatcttgtgaactaaactttcttagacagtttttgttgaatcaaatgttactgttcctggttcagaggtagcagtttattctgctcatagaaataagttcagagagaactcccacttgataaaatggaagttctttactgctgagttttgttgtctgaaatgaaaacattgcatggaagatgcttttgttgtctgaaaatgaaaatgttagctgctgaaatgtgagattcagtcagtctctgaagagccatgattgtgcaatttcaggggctcaaagccagctcgtgtgctctgggtgccgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcgcagtttgcagtaccgtgactgctgtgcctgctcctggtatgcacatgattcactcaggttttacatctcaaggttttgtttgtaagtaatgtggcatctgaaaattgagtttctttgcatctaaattttatagtagtttagaagtttatattgtaccctctgttttatttacaaaagtgagtagtttttggtttttagagcagaaatatagctgcaatgttcacaaaaatgtaaagagagattaaaggggatagcctgttttcccttgaaatcgatgcatgagttttgcatttgctgaaattttgttctgaaatgcagttttgccaatgattttcctacctggaatttctgtgcaggaaccgagatggcgcagttagtttgcggaggatgccacactctcctgatgtatatacgcggtgcgacgagtgtgcaatgttcttgctgtcacactgtcaacctggctatggaaggtactaccaaaatttatcatcctcctcctctgttgcaattggtatattctgtggctttgattccagtatgcaaaatcctcctcctgaacagaatattttcctgtggctgaaagcaacagcaatcagtcggtagcaataaacatcgtcgagttggcttgtattccagtcatattcatgagagttggctatggttcagaaaacaaaaaagtttgacaaggatacactagatttaccagagtatgatgaaatatctcctacaattacaagatgtgctacagtagtatcctatacttactgaaggtctcacaaggacacctaatttagcatcaagttctgaagttccatataatttgttcagagttcagagttttctttaaggcagacttctgaaagatgagtgtttgttcatataatcttaaacacactgaataacaaatgattcccatgttcttgatggcagcaaatcaagttgcgcatgtaaactgcgggaactgccgtatgctgctcatgtaccagtatggcgcaaggtctgtcaaatgcgcagtctgcaattttgtgacatcagttggggtaagtgttcatcaacaggacacttcaatttcatatttagttcctttatctgaaaacattcaattttacagtagcatcatctaatggctaatattgcactgcaacctgatttttttcatgatgtgaccttagttgaagagtgtgttttttttctgaatcttttcaggcctcacctggtacagaccagaagcccagcagctgaactgctgaagtgccataaatattcagaaaagagcttctcaaaccgatgctttgagtgcacatgtatagagttcttccctgaagcattttttttcttccttttttatctccctttccccccaatttccaccttccttccttggatatggagagagcctgcggaataaatgagagttttgctaaatacctagtgctcaaaattcgtcgaatcgtctgtatgaccgaacaagattgacatattatatacataaacctatgataatatttatgc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067577.1 RefSeq:Os08g0159500]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 8]]~~
−	~~[[Category:~~Chromosome 8]]

← Older revision		Revision as of 20:44, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os08g0159500\|		GeneName = Os08g0159500\|