Os08g0162100 - Revision history

Xysj2012: /* Structured Information */

2015-06-12T09:26:45Z

‎Structured Information

Xysj2012 at 14:03, 14 April 2013

2013-04-14T14:03:09Z

Xysj2012: /* Function */

2013-04-14T14:02:33Z

‎Function

Xysj2012 at 07:04, 1 April 2013

2013-04-01T07:04:37Z

Xysj2012: /* Wild Type VS. Mutant */

2013-04-01T00:50:05Z

‎Wild Type VS. Mutant

Xysj2012: /* Homologues */

2013-04-01T00:44:08Z

‎Homologues

Xysj2012: /* Homologues */

2013-04-01T00:42:54Z

‎Homologues

Xysj2012: /* Homologues */

2013-04-01T00:41:38Z

‎Homologues

Xysj2012: /* Mutation */

2013-03-29T15:22:25Z

‎Mutation

Xysj2012: /* References */

2013-03-29T15:11:51Z

‎References

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

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 ==Annotated Information==
 [[File:OsLis_1_Mutation.jpg|right|thumb|430px|'''Figure 1.''' ''Oslis-l1 mutant VS. WT(from reference) <ref name="ref1" />.'']]
 ===Function===
 This gene plays an important role in male gametophyte formation and the first internode elongation in rice<ref name="ref1" />. As a transcriptional co-repressor it repress a number of genes to regulates various aspects of developmental processes and physiological responses<ref name="ref2" />. Its function in branch formation regulation is likely by suppressing primary branch formation and promoting secondary branch formation<ref name="ref3" />.

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 ==Annotated Information==
 [[File:OsLis_1_Mutation.jpg|right|thumb|430px|'''Figure 1.''' ''Oslis-l1 mutant VS. WT(from reference) <ref name="ref1" />.'']]
 ===Function===
 This gene plays an important role in male gametophyte formation and the first internode elongation in rice<ref name="ref1" />. As a transcriptional co-repressor it repress a number of genes to regulates various aspects of developmental processes and physiological responses<ref name="ref2" />. Its function in branch formation regulation is likely by suppressing primary branch formation and promoting secondary branch formation<ref name="ref3" />.
 ===Wild Type VS. Mutant===
 * At the harvest stage, the height of the ''Oslis-l1-1'' mutant plants was only 48.9 cm(right), whereas WT plants had a height of 87.3 cm(left). (Fig. 1a).<br>

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-The rice ''Os08g0162100'' was reported as ''Lissencephalytype-1-like 1('''OsLIS-L1''')''<ref name="ref1" />, ''ABERRANT SPIKELET AND PANICLE1('''ASP1''')''<ref name="ref2" /> and ''Oryza RAMOSA1 ENHANCER LOCUS2('''OsREL2''')''<ref name="ref3" /> respectively in 2012  by scientsits from China, Japan and Korea(in chronological order).
+The rice ''Os08g0162100'' was reported as ''Lissencephalytype-1-like 1('''OsLIS-L1''')''<ref name="ref1" />, ''ABERRANT SPIKELET AND PANICLE1('''ASP1''')''<ref name="ref2" /> and ''Oryza RAMOSA1 ENHANCER LOCUS2('''OsREL2''')''<ref name="ref3" /> respectively in 2012  by researchers from China, Japan and Korea(in chronological order).
 ==Annotated Information==
 [[File:OsLis_1_Mutation.jpg|right|thumb|430px|'''Figure 1.''' ''Oslis-l1 mutant VS. WT(from reference) <ref name="ref1" />.'']]

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 This gene plays an important role in male gametophyte formation and the first internode elongation in rice<ref name="ref1" />. As a transcriptional co-repressor it repress a number of genes to regulates various aspects of developmental processes and physiological responses<ref name="ref2" />. Its function in branch formation regulation is likely by suppressing primary branch formation and promoting secondary branch formation<ref name="ref3" />.
 ===Wild Type VS. Mutant===
-* At the harvest stage, the height of the ''Oslis-l1-1'' mutant plants was only 48.9 cm, whereas WT plants had a height of 87.3 cm. (Fig. 1a).<br>
+* At the harvest stage, the height of the ''Oslis-l1-1'' mutant plants was only 48.9 cm(right), whereas WT plants had a height of 87.3 cm(left). (Fig. 1a).<br>
 * The semi-dwarf phenotype of ''Oslis-l1-1'' was partially due to its panicle length being shortened to 12.1 cm from 20.5 cm in WT.(Fig. 1b).<br>
 * The retarded vegetative growth also accompanied by smaller florets (Fig. 1c, d) and very low fertility. In contrast to the WT seed-setting rate (81.4%), the seedsetting rate of ''Oslis-l1-1'' mutant was only 11.3% in the same normal field conditions.<br>

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 ===Homologues===
-'''''OsLIS-L1''''' has two homologues in rice: '''''[[Os01g0254100]]''''' and '''''[[Os03g0254700]]'''''<ref name="ref1" /><ref name="ref3" />. The cDNA of ''Os01g15020'' and ''Os03g0254700'' shared 36% and 39% nucleotide identity with '''''OsLIS-L1''''', respectively; the ''Os01g15020'' polypeptide shared 62% identity and the ''Os03g14980'' polypeptide shared 67% identity with '''''OsLISL1'''''<ref name="ref1" />.
+'''''OsLIS-L1''''' has two homologues in rice: '''''[[Os01g0254100]]''''' and '''''[[Os03g0254700]]'''''<ref name="ref1" /><ref name="ref3" />. The cDNA of ''Os01g0254100'' and ''Os03g0254700'' shared 36% and 39% nucleotide identity with '''''OsLIS-L1''''', respectively; the ''Os01g0254100'' polypeptide shared 62% identity and the ''Os03g14980'' polypeptide shared 67% identity with '''''OsLISL1'''''<ref name="ref1" />.
-* ''Os01g15020'' and ''Os03g14980'' also contain four recognizable structural domains similar to '''''OsLIS-L1''''': starting from the N terminus, they are the LisH, CTLH, the WD40-repeat domain in the middle, and the WD40-repeat domain at the C terminus<ref name="ref1" />.
+* ''Os01g0254100'' and ''Os03g14980'' also contain four recognizable structural domains similar to '''''OsLIS-L1''''': starting from the N terminus, they are the LisH, CTLH, the WD40-repeat domain in the middle, and the WD40-repeat domain at the C terminus<ref name="ref1" />.
-* However, '''''OsLIS-L1''''' has a five WD40-repeat domain in the middle, but ''Os01g15020'' and ''Os03g0254700'' both have a six WD40-repeat domain in the middle; '''''OsLIS-L1''''' and ''Os03g0254700'' both have a four WD40-repeat domain at the C terminus, whereas ''Os01g15020'' has a five WD40-repeat domain at the C terminus<ref name="ref1" />.
+* However, '''''OsLIS-L1''''' has a five WD40-repeat domain in the middle, but ''Os01g0254100'' and ''Os03g0254700'' both have a six WD40-repeat domain in the middle; '''''OsLIS-L1''''' and ''Os03g0254700'' both have a four WD40-repeat domain at the C terminus, whereas ''Os01g15020'' has a five WD40-repeat domain at the C terminus<ref name="ref1" />.
 ==Labs working on this gene==

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 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==