Os08g0430500 - Revision history

Liman: /* Mutation */

2016-12-11T12:26:28Z

‎Mutation

Liman at 12:25, 11 December 2016

2016-12-11T12:25:52Z

Liman at 12:18, 11 December 2016

2016-12-11T12:18:35Z

Liman at 12:17, 11 December 2016

2016-12-11T12:17:34Z

Liman at 12:06, 11 December 2016

2016-12-11T12:06:54Z

Liman at 11:55, 11 December 2016

2016-12-11T11:55:40Z

Liman at 13:44, 15 October 2016

2016-10-15T13:44:57Z

192.168.72.52 at 13:05, 14 May 2015

2015-05-14T13:05:28Z

124.16.129.48 at 20:50, 22 July 2012

2012-07-22T20:50:16Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os08g0430500| Description = Similar to 14-3-3-like protein S94| Version = NM_001068391.1 GI:115476519 GeneID:4345634| Length = 3042 bp| Definit..."

2012-06-21T13:01:51Z

Created page with "{{JaponicaGene| GeneName = Os08g0430500| Description = Similar to 14-3-3-like protein S94| Version = NM_001068391.1 GI:115476519 GeneID:4345634| Length = 3042 bp| Definit..."

New page

{{JaponicaGene|
GeneName = Os08g0430500|
Description = Similar to 14-3-3-like protein S94|
Version = NM_001068391.1 GI:115476519 GeneID:4345634|
Length = 3042 bp|
Definition = Oryza sativa Japonica Group Os08g0430500, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
AP = Chromosome 8:20900592..20903633|
CDS = 20900919..20900978,20901072..20901188,20901641..20901763,20901947..20902025,20902114..20902505<br>|
GCID = <gbrowseImage1>
name=NC_008401:20900592..20903633
source=RiceChromosome08
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008401:20900592..20903633
source=RiceChromosome08
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgtctcgggaggagaatgtctacatggccaagctggccgagcaggctgaaaggtatgaggagatggttgagtacatggagaaggttgcaaagactgtagatgtggaagagctcactgttgaggagcgcaacctcttgtctgttgcttacaagaatgtgattggtgcccgccgtgcctcctggcgtattgtctcatccattgaacagaaggaggagggtcgtggcaatgaggaacatgttactctgatcaaggagtaccgtggcaagattgaagctgagctgagcaagatttgcgatggtatcctgaagttgcttgactcacaccttgtgccctcatctactgctgcagaatctaaggtgttttacctcaagatgaagggtgattaccacaggtaccttgcggaatttaagactggtgccgagagaaaggaagctgctgagagcacaatggtggcttacaaggctgctcaggatattgctctggcggatcttgctcccacccatcccataaggcttggactggcacttaacttctctgtgttctactacgagattctaaactctccagacaaggcttgcaaccttgctaagcaggcgtttgacgaagccatctccgagttggataccctcggggaggagtcttacaaggacagcactttgatcatgcagctcctgagggacaacttgaccctctggacctctgacctcacggaggacggtggtgatgaggtgaaagaagcctccaagggcgacgcctgcgagggccagtaa</cdnaseq>|
AA = <aaseq>MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERN LLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGIL KLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIA LADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDS TLIMQLLRDNLTLWTSDLTEDGGDEVKEASKGDACEGQ</aaseq>|
DNA = <dnaseqindica>2656..2715#2446..2562#1871..1993#1609..1687#1129..1520#gccgaacaaaaagcattcgcatccacgagaccactcgaacccgacccgcctcgccgccgccgccaccgaaggttagggttgccggaattttttctcttcctcttcctctcgcggttgcatttctaggcgtgctcgatctcacgggaaggcgtgcggcgatgtttttttttttggcgatttttttggggtggtgggttctggactgtgggatgtggttttgggctagatctggtgtgctcggtggtgatgggtgatttggatgggattggattcgtgagatctgcgatcccgtgcacgcgaggggagtagatccgctcggtttggcgagcttcgtctcgtttagaagtggggatttttgttttttgctttttttggattatcatctctgagttgagcaaacgtctgttggggatttggaaaagttagacagatttatttatttatttatttatttatttatttatttatttatttattgtggaagtatgttgatggtatcggttattagctgcgtttgatccacggattagatctaggtttaatctgttaatagtgtggggatctatatatatgtagcggtgaaaggtgcacgcctgctcggtattggggtgataatttttttatctggattgggaggtaggtggtcttggtttgtggaaaatcagtgtttgtctcgtgggtggattgatgcgacgtttagatctagcctagccatgtttatgatttattgatctgcaatgtttagatatatccctcattataaggctgtaattgagtttctgttagttctttctgtattgaacaatttttagtgattacaaatacaacttagttgagattatgaaatattttgaatttggacatgatattggcttattcatttgttacagcctttaaaaagagttagtattaaatatttgatggaatttgtaggattcagtagtattattcacaattgtttaattattcatttctcaacaaatgaacatccttgatatgaatgggaacatgatctgttttgtacaattataccttctggagagaccccatggctttcagattattaatgttggtgaatgcttatcagtacctttttatctggctacagtaatcccttaattggtcaaaatgtctcgggaggagaatgtctacatggccaagctggccgagcaggctgaaaggtatgaggagatggttgagtacatggagaaggttgcaaagactgtagatgtggaagagctcactgttgaggagcgcaacctcttgtctgttgcttacaagaatgtgattggtgcccgccgtgcctcctggcgtattgtctcatccattgaacagaaggaggagggtcgtggcaatgaggaacatgttactctgatcaaggagtaccgtggcaagattgaagctgagctgagcaagatttgcgatggtatcctgaagttgcttgactcacaccttgtgccctcatctactgctgcagaatctaaggtgttttacctcaagatgaagggtgattaccacaggttgggaatgatgcagcacttatcataaaaacaactgaatccttagtttatattgactattctaatttggttagtttataatttgcaggtaccttgcggaatttaagactggtgccgagagaaaggaagctgctgagagcacaatggtggcttacaaggctgctcaggtaggttgatttattttaattctgagataacatatatgctataccactgattcacttctcattttattactctagcaactaattagtacatgtctccatctggtaataaatgcatttcattgactgcttagtcgattcaggcaatgctttctgaaattgtctgtcccacgtttttctatgtaggatattgctctggcggatcttgctcccacccatcccataaggcttggactggcacttaacttctctgtgttctactacgagattctaaactctccagacaaggcttgcaaccttgctaagcaggttggtggtcatttgctcttctcttcaatataatcatgattgtgtcattagtatgaggtttctgtgctttaggatatgttgtatgatattaatttgaatttatactttgaagttaacttgctggtcattaaactctatagtttcctgctttaacttggatattcttcccctgcttattgttgattaaatttgtatttgtgcacgtggtagtatttgcctagtgatagctcatagtgtggtaattattttaatggggccaaagccaacaaaaaagtaagcatgataaatataggtttgtcaaatctgaacaaactattttgttttatgcattgttgaatcgctggtccttgatgtgtctgtgcttgttgtatgaaccctgacttttttgccatctggacgtttgtcgctatatcaactctaaataaatgtgactgatgaaccgtttgctacaggcgtttgacgaagccatctccgagttggataccctcggggaggagtcttacaaggacagcactttgatcatgcagctcctgagggacaacttgaccctctggacctctgacctcacggtacctctcaacacatcataagctcccttctgcaaaatccatcgacctaatgagcaacttgctaattttaccttgtgaaactatctgtggcaggaggacggtggtgatgaggtgaaagaagcctccaagggcgacgcctgcgagggccagtaaaatgggaagatcgatcgatcgatggctccgcatgttattggagaccatcgatttagatgcctcatgctgctgtcaccatgatggatggattcttctcctgttctactagaatgtttttcttcctgtccccccttcctctctcttctctggtttttactagggtggtagcggtcgaattagttcttcccattgctttgcatttggtgctagtggtccgtctgggctgattgttttcctctggatatgactctcgtgtgtgttgtctccagatagtgttttattgagcaatatttaaagttgtcgtccacctcctcgatgttgtttgtc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068391.1 RefSeq:Os08g0430500]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 8]]
[[Category:Chromosome 8]]

@@ Line 9: / Line 9: @@
 * GF14c acts as a negative regulator of flowering by interacting with Hd3a.
 ===Mutation===
-[[File:Os08g0430500-2.png|right|thumb|400px|'''Fig. 5 Characterization of gf14c T-DNA insertion plants.''' '' <ref name="ref1" />.'']]
+[[File:Os08g0430500-2.png|right|thumb|200px|'''Fig. 5 Characterization of gf14c T-DNA insertion plants.''' '' <ref name="ref1" />.'']]
 * To study further the function of GF14c in fl owering, we also used the gf14c/GF14c heterozygous T-DNA insertion mutants in japonica rice cv ‘Dongjin’ generated by Postech, Korea. The gf14c/ GF14c plants fl owered earlier than those of the wild type by about 14 d (12–17-d depending on the plants)
 * GF14c-overexpression plants were delayed by 5–20 d in fl owering relative to wild-type plants
 ===Expression ===

@@ Line 6: / Line 6: @@
 ===Function===
 * '''''GF14c''''' encodes an Hd3a-interacting protein.
 * GF14c acts as a negative regulator of flowering by interacting with Hd3a.
 ===Mutation===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+[[File:Os08g0430500-2.png|right|thumb|400px|'''Fig. 5 Characterization of gf14c T-DNA insertion plants.''' '' <ref name="ref1" />.'']]
 ===Expression ===

@@ Line 15: / Line 15: @@
 ===Evolution===
 * GF14s belong to the 14-3-3 protein group and have eight isoforms, designated as GF14a–h in rice <ref name="ref2" /><ref name="ref3" />, that share 85–95% amino acid identity ( Fig. 2A ). To determine whether the GF14 genes are expressed in rice organs, we performed semi-quantitative reverse transcription–PCR (RT–PCR) using specifi c primers ( Fig. 2B ).
 You can also add sub-section(s) at will.

@@ Line 15: / Line 15: @@
 ===Evolution===
-* GF14s belong to the 14-3-3 protein group and have eight isoforms, designated as GF14a–h in rice ( Chen et al. 2006a , Yao, et al. 2007), that share 85–95% amino acid identity ( Fig. 2A ). To determine whether the GF14 genes are expressed in rice organs, we performed semi-quantitative reverse transcription–PCR (RT–PCR) using specifi c primers ( Fig. 2B ).
+* GF14s belong to the 14-3-3 protein group and have eight isoforms, designated as GF14a–h in rice <ref name="ref2" /><ref name="ref3" />, that share 85–95% amino acid identity ( Fig. 2A ). To determine whether the GF14 genes are expressed in rice organs, we performed semi-quantitative reverse transcription–PCR (RT–PCR) using specifi c primers ( Fig. 2B ).
 [[File:Os08g0430500-1.png|right|thumb|400px|'''Fig. 2 Tissue-specific GF14s family members in rice.''' '' <ref name="ref1" />.'']]
@@ Line 28: / Line 28: @@
 florigen Hd3a. Plant Cell Physiol. 2009 Mar;50(3):429-38. doi:
 .1093/pcp/pcp012. PubMed PMID: 19179350.
 </ref>
 </references>

@@ Line 7: / Line 7: @@
 ===Function===
 [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* '''''GF14c''''' encodes an Hd3a-interacting protein.
 ===Mutation===
 [[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Expression ===
 ===Evolution===
 You can also add sub-section(s) at will.

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os08g0430500 was reported as '''''GF14c''''' in 2009<ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os08g0430500 <=> GF14c, OsGF14c
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+* Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara, 630-0101 Japan
 ==References==
 <references>
 * <ref name="ref1">
+Purwestri YA, Ogaki Y, Tamaki S, Tsuji H, Shimamoto K. The 14-3-3 protein
 </ref>
 </references>

← Older revision		Revision as of 13:05, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
−	~~GeneName = Os08g0430500\|~~
−	~~Description = Similar to 14-3-3-like protein S94\|~~
−	~~Version = NM_001068391.1 GI:115476519 GeneID:4345634\|~~
−	~~Length = 3042 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os08g0430500, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 8\|Chromosome 8]]\|~~
−	~~AP = Chromosome 8:20900592..20903633\|~~
−	~~CDS = 20900919..20900978,20901072..20901188,20901641..20901763,20901947..20902025,20902114..20902505<br>\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008401:20900592..20903633~~
−	~~source=RiceChromosome08~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008401:20900592..20903633~~
−	~~source=RiceChromosome08~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgtctcgggaggagaatgtctacatggccaagctggccgagcaggctgaaaggtatgaggagatggttgagtacatggagaaggttgcaaagactgtagatgtggaagagctcactgttgaggagcgcaacctcttgtctgttgcttacaagaatgtgattggtgcccgccgtgcctcctggcgtattgtctcatccattgaacagaaggaggagggtcgtggcaatgaggaacatgttactctgatcaaggagtaccgtggcaagattgaagctgagctgagcaagatttgcgatggtatcctgaagttgcttgactcacaccttgtgccctcatctactgctgcagaatctaaggtgttttacctcaagatgaagggtgattaccacaggtaccttgcggaatttaagactggtgccgagagaaaggaagctgctgagagcacaatggtggcttacaaggctgctcaggatattgctctggcggatcttgctcccacccatcccataaggcttggactggcacttaacttctctgtgttctactacgagattctaaactctccagacaaggcttgcaaccttgctaagcaggcgtttgacgaagccatctccgagttggataccctcggggaggagtcttacaaggacagcactttgatcatgcagctcctgagggacaacttgaccctctggacctctgacctcacggaggacggtggtgatgaggtgaaagaagcctccaagggcgacgcctgcgagggccagtaa</cdnaseq>\|
−	AA = <aaseq>MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERN LLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGIL KLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIA LADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDS TLIMQLLRDNLTLWTSDLTEDGGDEVKEASKGDACEGQ</aaseq>\|
−	DNA = <dnaseqindica>2656..2715#2446..2562#1871..1993#1609..1687#1129..1520#gccgaacaaaaagcattcgcatccacgagaccactcgaacccgacccgcctcgccgccgccgccaccgaaggttagggttgccggaattttttctcttcctcttcctctcgcggttgcatttctaggcgtgctcgatctcacgggaaggcgtgcggcgatgtttttttttttggcgatttttttggggtggtgggttctggactgtgggatgtggttttgggctagatctggtgtgctcggtggtgatgggtgatttggatgggattggattcgtgagatctgcgatcccgtgcacgcgaggggagtagatccgctcggtttggcgagcttcgtctcgtttagaagtggggatttttgttttttgctttttttggattatcatctctgagttgagcaaacgtctgttggggatttggaaaagttagacagatttatttatttatttatttatttatttatttatttatttatttattgtggaagtatgttgatggtatcggttattagctgcgtttgatccacggattagatctaggtttaatctgttaatagtgtggggatctatatatatgtagcggtgaaaggtgcacgcctgctcggtattggggtgataatttttttatctggattgggaggtaggtggtcttggtttgtggaaaatcagtgtttgtctcgtgggtggattgatgcgacgtttagatctagcctagccatgtttatgatttattgatctgcaatgtttagatatatccctcattataaggctgtaattgagtttctgttagttctttctgtattgaacaatttttagtgattacaaatacaacttagttgagattatgaaatattttgaatttggacatgatattggcttattcatttgttacagcctttaaaaagagttagtattaaatatttgatggaatttgtaggattcagtagtattattcacaattgtttaattattcatttctcaacaaatgaacatccttgatatgaatgggaacatgatctgttttgtacaattataccttctggagagaccccatggctttcagattattaatgttggtgaatgcttatcagtacctttttatctggctacagtaatcccttaattggtcaaaatgtctcgggaggagaatgtctacatggccaagctggccgagcaggctgaaaggtatgaggagatggttgagtacatggagaaggttgcaaagactgtagatgtggaagagctcactgttgaggagcgcaacctcttgtctgttgcttacaagaatgtgattggtgcccgccgtgcctcctggcgtattgtctcatccattgaacagaaggaggagggtcgtggcaatgaggaacatgttactctgatcaaggagtaccgtggcaagattgaagctgagctgagcaagatttgcgatggtatcctgaagttgcttgactcacaccttgtgccctcatctactgctgcagaatctaaggtgttttacctcaagatgaagggtgattaccacaggttgggaatgatgcagcacttatcataaaaacaactgaatccttagtttatattgactattctaatttggttagtttataatttgcaggtaccttgcggaatttaagactggtgccgagagaaaggaagctgctgagagcacaatggtggcttacaaggctgctcaggtaggttgatttattttaattctgagataacatatatgctataccactgattcacttctcattttattactctagcaactaattagtacatgtctccatctggtaataaatgcatttcattgactgcttagtcgattcaggcaatgctttctgaaattgtctgtcccacgtttttctatgtaggatattgctctggcggatcttgctcccacccatcccataaggcttggactggcacttaacttctctgtgttctactacgagattctaaactctccagacaaggcttgcaaccttgctaagcaggttggtggtcatttgctcttctcttcaatataatcatgattgtgtcattagtatgaggtttctgtgctttaggatatgttgtatgatattaatttgaatttatactttgaagttaacttgctggtcattaaactctatagtttcctgctttaacttggatattcttcccctgcttattgttgattaaatttgtatttgtgcacgtggtagtatttgcctagtgatagctcatagtgtggtaattattttaatggggccaaagccaacaaaaaagtaagcatgataaatataggtttgtcaaatctgaacaaactattttgttttatgcattgttgaatcgctggtccttgatgtgtctgtgcttgttgtatgaaccctgacttttttgccatctggacgtttgtcgctatatcaactctaaataaatgtgactgatgaaccgtttgctacaggcgtttgacgaagccatctccgagttggataccctcggggaggagtcttacaaggacagcactttgatcatgcagctcctgagggacaacttgaccctctggacctctgacctcacggtacctctcaacacatcataagctcccttctgcaaaatccatcgacctaatgagcaacttgctaattttaccttgtgaaactatctgtggcaggaggacggtggtgatgaggtgaaagaagcctccaagggcgacgcctgcgagggccagtaaaatgggaagatcgatcgatcgatggctccgcatgttattggagaccatcgatttagatgcctcatgctgctgtcaccatgatggatggattcttctcctgttctactagaatgtttttcttcctgtccccccttcctctctcttctctggtttttactagggtggtagcggtcgaattagttcttcccattgctttgcatttggtgctagtggtccgtctgggctgattgttttcctctggatatgactctcgtgtgtgttgtctccagatagtgttttattgagcaatatttaaagttgtcgtccacctcctcgatgttgtttgtc</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068391.1 RefSeq:Os08g0430500]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 8]]~~
−	~~[[Category:~~Chromosome 8]]

← Older revision		Revision as of 20:50, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os08g0430500\|		GeneName = Os08g0430500\|